SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    855401 8p4v:b (3.16) BS01 rna N/A GO:0000054 ... P39939 40119759
    855402 8p4v:b (3.16) BS02 ZN N/A GO:0000054 ... P39939 40119759
    855403 8p4v:c (3.16) BS01 rna N/A GO:0000028 ... P35997 40119759
    855404 8p4v:c (3.16) BS02 ZN N/A GO:0000028 ... P35997 40119759
    855405 8p4v:c0 (3.16) BS01 rna N/A GO:0000054 ... Q08745 40119759
    855406 8p4v:c1 (3.16) BS01 rna N/A GO:0000028 ... P0CX47 40119759
    855407 8p4v:c2 (3.16) BS01 rna N/A GO:0000028 ... P48589 40119759
    855408 8p4v:c3 (3.16) BS01 rna N/A GO:0000462 ... P05756 40119759
    855409 8p4v:c3 (3.16) BS02 OHX N/A GO:0000462 ... P05756 40119759
    855410 8p4v:c4 (3.16) BS01 rna N/A GO:0000028 ... P06367 40119759
    855411 8p4v:c4 (3.16) BS02 MG N/A GO:0000028 ... P06367 40119759
    855412 8p4v:c5 (3.16) BS01 rna N/A GO:0000054 ... Q01855 40119759
    855413 8p4v:c5 (3.16) BS02 OHX N/A GO:0000054 ... Q01855 40119759
    855414 8p4v:c6 (3.16) BS01 rna N/A GO:0000462 ... P0CX51 40119759
    855415 8p4v:c6 (3.16) BS02 MG N/A GO:0000462 ... P0CX51 40119759
    855416 8p4v:c7 (3.16) BS01 rna N/A GO:0000028 ... P02407 40119759
    855417 8p4v:c7 (3.16) BS02 OHX N/A GO:0000028 ... P02407 40119759
    855418 8p4v:c8 (3.16) BS01 rna N/A GO:0000054 ... P0CX55 40119759
    855419 8p4v:c8 (3.16) BS02 OHX N/A GO:0000054 ... P0CX55 40119759
    855420 8p4v:c9 (3.16) BS01 rna N/A GO:0000054 ... P07280 40119759
    855421 8p4v:c9 (3.16) BS02 MG N/A GO:0000054 ... P07280 40119759
    855422 8p4v:d (3.16) BS01 rna N/A GO:0000028 ... Q3E7X9 40119759
    855423 8p4v:d0 (3.16) BS01 rna N/A GO:0000462 ... P38701 40119759
    855424 8p4v:d1 (3.16) BS01 rna N/A GO:0000447 ... P0C0V8 40119759
    855425 8p4v:d2 (3.16) BS01 rna N/A GO:0002181 ... P0C0W1 40119759
    855426 8p4v:d3 (3.16) BS01 rna N/A GO:0000462 ... P0CX29 40119759
    855427 8p4v:d3 (3.16) BS02 MG N/A GO:0000462 ... P0CX29 40119759
    855428 8p4v:d4 (3.16) BS01 rna N/A GO:0000462 ... P0CX31 40119759
    855429 8p4v:d5 (3.16) BS01 rna N/A GO:0002181 ... Q3E792 40119759
    855430 8p4v:d6 (3.16) BS01 rna N/A GO:0000054 ... P39939 40119759
    855431 8p4v:d6 (3.16) BS02 ZN N/A GO:0000054 ... P39939 40119759
    855432 8p4v:d7 (3.16) BS01 rna N/A GO:0000028 ... P35997 40119759
    855433 8p4v:d7 (3.16) BS02 ZN N/A GO:0000028 ... P35997 40119759
    855434 8p4v:d8 (3.16) BS01 rna N/A GO:0000028 ... Q3E7X9 40119759
    855435 8p4v:d9 (3.16) BS01 rna N/A GO:0002181 ... P41057 40119759
    855436 8p4v:d9 (3.16) BS02 ZN N/A GO:0002181 ... P41057 40119759
    855437 8p4v:e (3.16) BS01 rna N/A GO:0002181 ... P41057 40119759
    855438 8p4v:e (3.16) BS02 ZN N/A GO:0002181 ... P41057 40119759
    855439 8p4v:e0 (3.16) BS01 rna N/A GO:0002181 ... P0CX33 40119759
    855440 8p4v:e1 (3.16) BS01 rna N/A GO:0000028 ... P05759 40119759
    855441 8p4v:f (3.16) BS01 rna N/A GO:0002181 ... P0CX33 40119759
    855442 8p4v:g (3.16) BS01 rna N/A GO:0000028 ... P05759 40119759
    855443 8p4v:g (3.16) BS02 ZN N/A GO:0000028 ... P05759 40119759
    855444 8p4v:h (3.16) BS01 rna N/A GO:0001965 ... P38011 40119759
    855445 8p4v:h (3.16) BS02 OHX N/A GO:0001965 ... P38011 40119759
    855446 8p4v:i (3.16) BS01 rna N/A GO:0000723 ... P39015 40119759
    855447 8p4v:i (3.16) BS02 rna N/A GO:0000723 ... P39015 40119759
    855448 8p4v:i (3.16) BS03 MG N/A GO:0000723 ... P39015 40119759
    855449 8p4v:j (3.16) BS01 rna N/A GO:0002181 ... P0CX45 40119759
    855450 8p4v:j (3.16) BS02 rna N/A GO:0002181 ... P0CX45 40119759
    855451 8p4v:j (3.16) BS03 MG N/A GO:0002181 ... P0CX45 40119759
    855452 8p4v:k (3.16) BS01 rna N/A GO:0000027 ... P14126 40119759
    855453 8p4v:k (3.16) BS02 OHX N/A GO:0000027 ... P14126 40119759
    855454 8p4v:k (3.16) BS03 OHX N/A GO:0000027 ... P14126 40119759
    855455 8p4v:l (3.16) BS01 rna N/A GO:0002181 ... P10664 40119759
    855456 8p4v:l (3.16) BS02 rna N/A GO:0002181 ... P10664 40119759
    855457 8p4v:l (3.16) BS03 MG N/A GO:0002181 ... P10664 40119759
    855458 8p4v:l (3.16) BS04 OHX N/A GO:0002181 ... P10664 40119759
    855459 8p4v:m (3.16) BS01 rna N/A GO:0000027 ... P26321 40119759
    855460 8p4v:m (3.16) BS02 rna N/A GO:0000027 ... P26321 40119759
    855461 8p4v:n (3.16) BS01 rna N/A GO:0000027 ... Q02326 40119759
    855462 8p4v:o (3.16) BS01 rna N/A GO:0000463 ... P05737 40119759
    855463 8p4v:o (3.16) BS02 rna N/A GO:0000463 ... P05737 40119759
    855464 8p4v:o (3.16) BS03 OHX N/A GO:0000463 ... P05737 40119759
    855465 8p4v:p (3.16) BS01 rna N/A GO:0000470 ... P17076 40119759
    855466 8p4v:p (3.16) BS02 rna N/A GO:0000470 ... P17076 40119759
    855467 8p4v:p0 (3.16) BS01 rna N/A GO:0042254 ... N/A 40119759
    855468 8p4v:q (3.16) BS01 rna N/A GO:0002181 ... P05738 40119759
    855469 8p4v:r (3.16) BS01 rna N/A GO:0000027 ... P41805 40119759
    855470 8p4v:r (3.16) BS02 rna N/A GO:0000027 ... P41805 40119759
    855471 8p4v:r (3.16) BS03 MG N/A GO:0000027 ... P41805 40119759
    855472 8p4v:r (3.16) BS04 OHX N/A GO:0000027 ... P41805 40119759
    855473 8p4v:s (3.16) BS01 rna N/A GO:0000027 ... P0C0W9 40119759
    855474 8p4v:s (3.16) BS02 rna N/A GO:0000027 ... P0C0W9 40119759
    855475 8p4v:s (3.16) BS03 MG N/A GO:0000027 ... P0C0W9 40119759
    855476 8p4v:s0 (3.16) BS01 rna N/A GO:0000028 ... P32905 40119759
    855477 8p4v:s1 (3.16) BS01 rna N/A GO:0000462 ... P33442 40119759
    855478 8p4v:s1 (3.16) BS02 rna N/A GO:0000462 ... P33442 40119759
    855479 8p4v:s1 (3.16) BS03 OHX N/A GO:0000462 ... P33442 40119759
    855480 8p4v:s2 (3.16) BS01 rna N/A GO:0000054 ... P25443 40119759
    855481 8p4v:s3 (3.16) BS01 rna N/A GO:0000054 ... P05750 40119759
    855482 8p4v:s4 (3.16) BS01 rna N/A GO:0002181 ... P0CX35 40119759
    855483 8p4v:s4 (3.16) BS02 OHX N/A GO:0002181 ... P0CX35 40119759
    855484 8p4v:s4 (3.16) BS03 MG N/A GO:0002181 ... P0CX35 40119759
    855485 8p4v:s5 (3.16) BS01 rna N/A GO:0000054 ... P26783 40119759
    855486 8p4v:s6 (3.16) BS01 rna N/A GO:0000462 ... P0CX37 40119759
    855487 8p4v:s6 (3.16) BS02 MG N/A GO:0000462 ... P0CX37 40119759
    855488 8p4v:s7 (3.16) BS01 rna N/A GO:0002181 ... P26786 40119759
    855489 8p4v:s8 (3.16) BS01 rna N/A GO:0000462 ... P0CX39 40119759
    855490 8p4v:s8 (3.16) BS02 rna N/A GO:0000462 ... P0CX39 40119759
    855491 8p4v:s9 (3.16) BS01 rna N/A GO:0000462 ... O13516 40119759
    855492 8p4v:sM (3.16) BS01 rna N/A GO:0000723 ... P39015 40119759
    855493 8p4v:sM (3.16) BS02 rna N/A GO:0000723 ... P39015 40119759
    855494 8p4v:sM (3.16) BS03 MG N/A GO:0000723 ... P39015 40119759
    855495 8p4v:t (3.16) BS01 rna N/A GO:0002181 ... Q12690 40119759
    855496 8p4v:t (3.16) BS02 rna N/A GO:0002181 ... Q12690 40119759
    855497 8p4v:u (3.16) BS01 rna N/A GO:0000027 ... P36105 40119759
    855498 8p4v:v (3.16) BS01 rna N/A GO:0000470 ... P05748 40119759
    855499 8p4v:v (3.16) BS02 rna N/A GO:0000470 ... P05748 40119759
    855500 8p4v:v (3.16) BS03 OHX N/A GO:0000470 ... P05748 40119759
    855501 8p4v:w (3.16) BS01 rna N/A GO:0000470 ... P26784 40119759
    855502 8p4v:x (3.16) BS01 rna N/A GO:0000448 ... P05740 40119759
    855503 8p4v:x (3.16) BS02 rna N/A GO:0000448 ... P05740 40119759
    855504 8p4v:x (3.16) BS03 MG N/A GO:0000448 ... P05740 40119759
    855505 8p4v:y (3.16) BS01 rna N/A GO:0002181 ... P0CX49 40119759
    855506 8p4v:z (3.16) BS01 rna N/A GO:0002181 ... P0CX82 40119759
    855507 8p4v:z (3.16) BS02 rna N/A GO:0002181 ... P0CX82 40119759
    855508 8p4v:z (3.16) BS03 OHX N/A GO:0002181 ... P0CX82 40119759
    855509 8p4x:A (2.57) BS01 FAD ? GO:0003677 ... G8Z9G7 37903809
    855510 8p4x:A (2.57) BS02 MG ? GO:0003677 ... G8Z9G7 37903809
    855511 8p4x:B (2.57) BS01 FAD ? GO:0003677 ... G8Z9G7 37903809
    855512 8p4x:B (2.57) BS02 MG ? GO:0003677 ... G8Z9G7 37903809
    855513 8p4z:A (2.75) BS01 WZ8 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P50613 N/A
    855514 8p4z:B (2.75) BS01 WZ8 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P50613 N/A
    855515 8p50:B (4.04) BS01 GTP ? GO:0000139 ... P61204 38086871
    855516 8p53:A (2.7) BS01 ACP ? GO:0005524 ... G3XD64 38051770
    855517 8p53:A (2.7) BS02 ACP ? GO:0005524 ... G3XD64 38051770
    855518 8p53:B (2.7) BS01 ACP ? GO:0005524 ... G3XD64 38051770
    855519 8p53:B (2.7) BS02 ACP ? GO:0005524 ... G3XD64 38051770
    855520 8p54:A (1.6) BS01 ALD 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38051605
    855521 8p55:A (1.85) BS01 ALD 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38051605
    855522 8p56:A (1.63) BS01 X77 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38051605
    855523 8p57:A (1.6) BS01 X77 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38051605
    855524 8p58:A (1.55) BS01 X77 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38051605
    855525 8p58:B (1.55) BS01 X77 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38051605
    855526 8p59:A (1.8) BS01 WZF 2.7.13.3 GO:0016310 ... Q56310 N/A
    855527 8p59:B (1.8) BS01 WZF 2.7.13.3 GO:0016310 ... Q56310 N/A
    855528 8p5a:A (1.66) BS01 X77 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38051605
    855529 8p5a:B (1.66) BS01 X77 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38051605
    855530 8p5c:A (1.51) BS01 9M5 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38051605
    855531 8p5c:B (1.51) BS01 9M5 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 38051605
    855532 8p5d:LA0 (10.8) BS01 rna ? GO:0002181 ... S7W736 37709902
    855533 8p5d:LA0 (10.8) BS02 rna ? GO:0002181 ... S7W736 37709902
    855534 8p5d:LAA (10.8) BS01 rna N/A GO:0003735 ... N/A 37709902
    855535 8p5d:LB0 (10.8) BS01 rna ? GO:0000027 ... S7XFB1 37709902
    855536 8p5d:LC0 (10.8) BS01 rna ? GO:0003735 ... S7WCM8 37709902
    855537 8p5d:LCC (10.8) BS01 rna ? GO:0003723 ... S7WAY0 37709902
    855538 8p5d:LD0 (10.8) BS01 rna ? GO:0000027 ... S7XIG7 37709902
    855539 8p5d:LD0 (10.8) BS02 rna ? GO:0000027 ... S7XIG7 37709902
    855540 8p5d:LDD (10.8) BS01 rna ? GO:0002181 ... S7XW48 37709902
    855541 8p5d:LE0 (10.8) BS01 rna ? GO:0000027 ... S7W5S3 37709902
    855542 8p5d:LEE (10.8) BS01 rna ? GO:0003735 ... S7XKE0 37709902
    855543 8p5d:LF0 (10.8) BS01 rna ? GO:0000463 ... S7W946 37709902
    855544 8p5d:LF0 (10.8) BS02 rna ? GO:0000463 ... S7W946 37709902
    855545 8p5d:LFF (10.8) BS01 rna ? GO:0003735 ... S7W662 37709902
    855546 8p5d:LG0 (10.8) BS01 rna ? GO:0003723 ... S7XU63 37709902
    855547 8p5d:LGG (10.8) BS01 rna ? GO:0003735 ... S7W7C6 37709902
    855548 8p5d:LGG (10.8) BS02 ZN ? GO:0003735 ... S7W7C6 37709902
    855549 8p5d:LH0 (10.8) BS01 rna ? GO:0002181 ... S7XRZ9 37709902
    855550 8p5d:LHH (10.8) BS01 rna ? GO:0003735 ... S7W7Y2 37709902
    855551 8p5d:LI0 (10.8) BS01 rna ? GO:0000027 ... S7WBF8 37709902
    855552 8p5d:LI0 (10.8) BS02 rna ? GO:0000027 ... S7WBF8 37709902
    855553 8p5d:LII (10.8) BS01 rna ? GO:0003735 ... S7WED1 37709902
    855554 8p5d:LJ0 (10.8) BS01 rna ? GO:0003735 ... S7WB69 37709902
    855555 8p5d:LJ0 (10.8) BS02 rna ? GO:0003735 ... S7WB69 37709902
    855556 8p5d:LJJ (10.8) BS01 rna N/A GO:0003735 ... N/A 37709902
    855557 8p5d:LJJ (10.8) BS02 ZN N/A GO:0003735 ... N/A 37709902
    855558 8p5d:LL0 (10.8) BS01 rna ? GO:0003723 ... S7XVM9 37709902
    855559 8p5d:LLL (10.8) BS01 rna ? GO:0003735 ... S7XTP1 37709902
    855560 8p5d:LM0 (10.8) BS01 rna ? N/A S7XVN9 37709902
    855561 8p5d:LMM (10.8) BS01 rna ? GO:0003735 ... S7XSQ3 37709902
    855562 8p5d:LMM (10.8) BS02 ZN ? GO:0003735 ... S7XSQ3 37709902
    855563 8p5d:LN0 (10.8) BS01 rna ? GO:0002181 ... S7W7A2 37709902
    855564 8p5d:LO0 (10.8) BS01 rna ? GO:0003729 ... S7XUD8 37709902
    855565 8p5d:LOO (10.8) BS01 rna ? GO:0003735 ... S7XL20 37709902
    855566 8p5d:LOO (10.8) BS02 ZN ? GO:0003735 ... S7XL20 37709902
    855567 8p5d:LP0 (10.8) BS01 rna ? GO:0002181 ... S7WDR4 37709902
    855568 8p5d:LPP (10.8) BS01 rna ? GO:0003735 ... S7W6N9 37709902
    855569 8p5d:LPP (10.8) BS02 ZN ? GO:0003735 ... S7W6N9 37709902
    855570 8p5d:LQ0 (10.8) BS01 rna ? GO:0003723 ... S7WAI2 37709902
    855571 8p5d:LR0 (10.8) BS01 rna ? GO:0003723 ... S7WBY9 37709902
    855572 8p5d:LS0 (10.8) BS01 rna ? GO:0003735 ... S7WAG4 37709902
    855573 8p5d:LS0 (10.8) BS02 rna ? GO:0003735 ... S7WAG4 37709902
    855574 8p5d:LT0 (10.8) BS01 rna ? GO:0003735 ... S7W8F6 37709902
    855575 8p5d:LT0 (10.8) BS02 rna ? GO:0003735 ... S7W8F6 37709902
    855576 8p5d:LU0 (10.8) BS01 rna ? GO:0002181 ... S7W958 37709902
    855577 8p5d:LV0 (10.8) BS01 rna ? GO:0003735 ... S7XLC4 37709902
    855578 8p5d:LV0 (10.8) BS02 rna ? GO:0003735 ... S7XLC4 37709902
    855579 8p5d:LW0 (10.8) BS01 rna ? N/A S7XSY2 37709902
    855580 8p5d:LW0 (10.8) BS02 rna ? N/A S7XSY2 37709902
    855581 8p5d:LX0 (10.8) BS01 rna ? GO:0003735 ... S7XFW8 37709902
    855582 8p5d:LY0 (10.8) BS01 rna ? GO:0003723 ... S7W884 37709902
    855583 8p5d:LZ0 (10.8) BS01 rna ? GO:0003735 ... S7XU08 37709902
    855584 8p5d:MD1 (10.8) BS01 rna ? N/A S7W5K5 37709902
    855585 8p5d:SA0 (10.8) BS01 rna ? GO:0003735 ... S7W8R1 37709902
    855586 8p5d:SAA (10.8) BS01 rna ? GO:0003729 ... S7W9M7 37709902
    855587 8p5d:SAA (10.8) BS02 ZN ? GO:0003729 ... S7W9M7 37709902
    855588 8p5d:SB0 (10.8) BS01 rna N/A GO:0003735 ... N/A 37709902
    855589 8p5d:SBB (10.8) BS01 rna N/A GO:0003735 ... N/A 37709902
    855590 8p5d:SBB (10.8) BS02 ZN N/A GO:0003735 ... N/A 37709902
    855591 8p5d:SC0 (10.8) BS01 rna ? GO:0003723 ... S7W7R5 37709902
    855592 8p5d:SD0 (10.8) BS01 rna ? GO:0000054 ... S7WAW0 37709902
    855593 8p5d:SDD (10.8) BS01 rna ? GO:0002181 ... S7XJB1 37709902
    855594 8p5d:SDD (10.8) BS02 ZN ? GO:0002181 ... S7XJB1 37709902
    855595 8p5d:SE0 (10.8) BS01 rna ? GO:0003723 ... S7XG51 37709902
    855596 8p5d:SEE (10.8) BS01 rna N/A GO:0003735 ... N/A 37709902
    855597 8p5d:SF0 (10.8) BS01 rna ? GO:0000054 ... S7W4M9 37709902
    855598 8p5d:SFF (10.8) BS01 rna ? GO:0003735 ... S7W9X5 37709902
    855599 8p5d:SG0 (10.8) BS01 rna ? GO:0003735 ... S7WDE5 37709902
    855600 8p5d:SGG (10.8) BS01 rna ? GO:0006417 ... S7XVG3 37709902
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).