SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    855601 8pow:S (1.61) BS03 ER2 1.12.99.6 GO:0005515 ... P31892 37860641
    855602 8pox:L (1.6) BS01 NFU N/A GO:0005515 ... P31891 37860641
    855603 8pox:L (1.6) BS02 MG N/A GO:0005515 ... P31891 37860641
    855604 8pox:S (1.6) BS01 SF4 N/A GO:0005515 ... P31892 37860641
    855605 8pox:S (1.6) BS02 F3S N/A GO:0005515 ... P31892 37860641
    855606 8pox:S (1.6) BS03 SF4 N/A GO:0005515 ... P31892 37860641
    855607 8pox:S (1.6) BS04 ER2 N/A GO:0005515 ... P31892 37860641
    855608 8poz:L (1.65) BS01 NFU N/A GO:0005515 ... P31891 37860641
    855609 8poz:L (1.65) BS02 MG N/A GO:0005515 ... P31891 37860641
    855610 8poz:S (1.65) BS01 SF4 N/A GO:0005515 ... P31892 37860641
    855611 8poz:S (1.65) BS02 F3S N/A GO:0005515 ... P31892 37860641
    855612 8poz:S (1.65) BS03 35L N/A GO:0005515 ... P31892 37860641
    855613 8poz:S (1.65) BS04 SF3 N/A GO:0005515 ... P31892 37860641
    855614 8pp0:A (1.9) BS01 peptide ? GO:0003677 ... P19793 38237049
    855615 8pp0:A (1.9) BS02 7QJ ? GO:0003677 ... P19793 38237049
    855616 8pp2:A (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855617 8pp2:B (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855618 8pp2:C (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855619 8pp2:D (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855620 8pp2:E (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855621 8pp2:F (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855622 8pp2:G (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855623 8pp2:H (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855624 8pp2:I (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855625 8pp2:J (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855626 8pp2:K (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855627 8pp2:L (2.001) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855628 8pp3:A (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855629 8pp3:B (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855630 8pp3:C (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855631 8pp3:D (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855632 8pp3:E (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855633 8pp3:F (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855634 8pp3:G (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855635 8pp3:H (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855636 8pp3:I (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855637 8pp3:J (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855638 8pp3:K (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855639 8pp3:L (1.55) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855640 8pp4:A (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855641 8pp4:B (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855642 8pp4:C (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855643 8pp4:C (1.999) BS02 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855644 8pp4:D (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855645 8pp4:E (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855646 8pp4:F (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855647 8pp4:G (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855648 8pp4:H (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855649 8pp4:I (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855650 8pp4:J (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855651 8pp4:K (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855652 8pp4:L (1.999) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855653 8pp5:A (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855654 8pp5:B (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855655 8pp5:C (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855656 8pp5:D (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855657 8pp5:E (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855658 8pp5:F (2.0) BS01 FE 1.16.3.1 GO:0004322 ... P02794 38059469
    855659 8pp6:A (3.18) BS01 dna ? GO:0000785 ... P02299 38528151
    855660 8pp6:A (3.18) BS02 dna ? GO:0000785 ... P02299 38528151
    855661 8pp6:B (3.18) BS01 dna ? GO:0000228 ... P84040 38528151
    855662 8pp6:B (3.18) BS02 dna ? GO:0000228 ... P84040 38528151
    855663 8pp6:C (3.18) BS01 dna ? GO:0000786 ... P84051 38528151
    855664 8pp6:C (3.18) BS02 dna ? GO:0000786 ... P84051 38528151
    855665 8pp6:D (3.18) BS01 dna ? GO:0000786 ... P02283 38528151
    855666 8pp6:D (3.18) BS02 dna ? GO:0000786 ... P02283 38528151
    855667 8pp6:E (3.18) BS01 dna ? GO:0000785 ... P02299 38528151
    855668 8pp6:E (3.18) BS02 dna ? GO:0000785 ... P02299 38528151
    855669 8pp6:F (3.18) BS01 dna ? GO:0000228 ... P84040 38528151
    855670 8pp6:F (3.18) BS02 dna ? GO:0000228 ... P84040 38528151
    855671 8pp6:G (3.18) BS01 dna ? GO:0000786 ... P84051 38528151
    855672 8pp6:G (3.18) BS02 dna ? GO:0000786 ... P84051 38528151
    855673 8pp6:H (3.18) BS01 dna ? GO:0000786 ... P02283 38528151
    855674 8pp6:H (3.18) BS02 dna ? GO:0000786 ... P02283 38528151
    855675 8pp6:K (3.18) BS01 ZN ? GO:0000122 ... Q8N488 38528151
    855676 8pp7:A (2.91) BS01 dna ? GO:0000785 ... P02299 38528151
    855677 8pp7:A (2.91) BS02 dna ? GO:0000785 ... P02299 38528151
    855678 8pp7:B (2.91) BS01 dna ? GO:0000228 ... P84040 38528151
    855679 8pp7:B (2.91) BS02 dna ? GO:0000228 ... P84040 38528151
    855680 8pp7:C (2.91) BS01 dna ? GO:0000786 ... P84051 38528151
    855681 8pp7:C (2.91) BS02 dna ? GO:0000786 ... P84051 38528151
    855682 8pp7:D (2.91) BS01 dna ? GO:0000786 ... P02283 38528151
    855683 8pp7:D (2.91) BS02 dna ? GO:0000786 ... P02283 38528151
    855684 8pp7:E (2.91) BS01 dna ? GO:0000785 ... P02299 38528151
    855685 8pp7:E (2.91) BS02 dna ? GO:0000785 ... P02299 38528151
    855686 8pp7:F (2.91) BS01 dna ? GO:0000228 ... P84040 38528151
    855687 8pp7:G (2.91) BS01 dna ? GO:0000786 ... P84051 38528151
    855688 8pp7:G (2.91) BS02 dna ? GO:0000786 ... P84051 38528151
    855689 8pp7:H (2.91) BS01 dna ? GO:0000786 ... P02283 38528151
    855690 8pp7:H (2.91) BS02 dna ? GO:0000786 ... P02283 38528151
    855691 8pp7:K (2.91) BS01 ZN ? GO:0000122 ... P35226 38528151
    855692 8pp7:K (2.91) BS02 ZN ? GO:0000122 ... P35226 38528151
    855693 8pp7:L (2.91) BS01 ZN 2.3.2.27 GO:0000122 ... Q99496 38528151
    855694 8pp7:L (2.91) BS02 ZN 2.3.2.27 GO:0000122 ... Q99496 38528151
    855695 8pp7:M (2.91) BS01 ZN ? GO:0000122 ... P35226 38528151
    855696 8pp7:M (2.91) BS02 ZN ? GO:0000122 ... P35226 38528151
    855697 8pp7:N (2.91) BS01 ZN 2.3.2.27 GO:0000122 ... Q99496 38528151
    855698 8pp7:N (2.91) BS02 ZN 2.3.2.27 GO:0000122 ... Q99496 38528151
    855699 8pp8:A (1.59) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    855700 8pp8:A (1.59) BS02 3IA 2.7.1.127 GO:0016301 ... P23677 38374076
    855701 8pp8:B (1.59) BS01 3IA 2.7.1.127 GO:0016301 ... P23677 38374076
    855702 8pp8:B (1.59) BS02 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    855703 8pp9:A (1.73) BS01 4IM 2.7.1.127 GO:0016301 ... P23677 38374076
    855704 8pp9:A (1.73) BS02 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    855705 8pp9:B (1.73) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    855706 8pp9:B (1.73) BS02 4IM 2.7.1.127 GO:0016301 ... P23677 38374076
    855707 8ppa:A (1.73) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    855708 8ppa:A (1.73) BS02 06G 2.7.1.127 GO:0016301 ... P23677 38374076
    855709 8ppa:B (1.73) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    855710 8ppa:B (1.73) BS02 06G 2.7.1.127 GO:0016301 ... P23677 38374076
    855711 8ppb:A (1.8) BS01 3I2 2.7.1.127 GO:0016301 ... P23677 38374076
    855712 8ppb:A (1.8) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    855713 8ppb:B (1.8) BS01 3I2 2.7.1.127 GO:0016301 ... P23677 38374076
    855714 8ppb:B (1.8) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    855715 8ppc:A (1.92) BS01 2KM 2.7.1.127 GO:0016301 ... P23677 38374076
    855716 8ppc:A (1.92) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    855717 8ppc:B (1.92) BS01 2KM 2.7.1.127 GO:0016301 ... P23677 38374076
    855718 8ppc:B (1.92) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    855719 8ppd:A (1.77) BS01 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    855720 8ppd:A (1.77) BS02 75I 2.7.1.127 GO:0016301 ... P23677 38374076
    855721 8ppd:B (1.77) BS01 75I 2.7.1.127 GO:0016301 ... P23677 38374076
    855722 8ppd:B (1.77) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    855723 8ppe:A (1.59) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    855724 8ppe:A (1.59) BS02 7I8 2.7.1.127 GO:0016301 ... P23677 38374076
    855725 8ppe:B (1.59) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    855726 8ppe:B (1.59) BS02 7I8 2.7.1.127 GO:0016301 ... P23677 38374076
    855727 8ppf:A (1.85) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    855728 8ppf:A (1.85) BS02 6II 2.7.1.127 GO:0016301 ... P23677 38374076
    855729 8ppf:B (1.85) BS01 ANP 2.7.1.127 GO:0016301 ... P23677 38374076
    855730 8ppf:B (1.85) BS02 6II 2.7.1.127 GO:0016301 ... P23677 38374076
    855731 8ppg:A (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    855732 8ppg:A (1.75) BS02 46I 2.7.1.127 GO:0016301 ... P23677 38374076
    855733 8ppg:B (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    855734 8ppg:B (1.75) BS02 46I 2.7.1.127 GO:0016301 ... P23677 38374076
    855735 8pph:A (1.7) BS01 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    855736 8pph:A (1.7) BS02 5AI 2.7.1.127 GO:0016301 ... P23677 38374076
    855737 8pph:B (1.7) BS01 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    855738 8ppi:A (1.65) BS01 69I 2.7.1.127 GO:0016301 ... P23677 38374076
    855739 8ppi:A (1.65) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    855740 8ppi:B (1.65) BS01 69I 2.7.1.127 GO:0016301 ... P23677 38374076
    855741 8ppi:B (1.65) BS02 ATP 2.7.1.127 GO:0016301 ... P23677 38374076
    855742 8ppj:A (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    855743 8ppj:A (1.75) BS02 661 2.7.1.127 GO:0016301 ... P23677 38374076
    855744 8ppj:B (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    855745 8ppj:B (1.75) BS02 661 2.7.1.127 GO:0016301 ... P23677 38374076
    855746 8ppk:A (2.98) BS01 rna ? GO:0000028 ... P08865 37802027
    855747 8ppk:B (2.98) BS01 rna ? GO:0002181 ... P61247 37802027
    855748 8ppk:C (2.98) BS01 rna ? GO:0002181 ... P15880 37802027
    855749 8ppk:D (2.98) BS01 rna 4.2.99.18 GO:0000977 ... P23396 37802027
    855750 8ppk:E (2.98) BS01 rna ? GO:0002181 ... P62701 37802027
    855751 8ppk:F (2.98) BS01 rna ? GO:0000028 ... P46782 37802027
    855752 8ppk:G (2.98) BS01 rna ? GO:0000082 ... P62753 37802027
    855753 8ppk:H (2.98) BS01 rna ? GO:0001843 ... P62081 37802027
    855754 8ppk:I (2.98) BS01 rna ? GO:0000462 ... P62241 37802027
    855755 8ppk:J (2.98) BS01 rna ? GO:0002181 ... P46781 37802027
    855756 8ppk:K (2.98) BS01 rna ? GO:0002181 ... P46783 37802027
    855757 8ppk:L (2.98) BS01 rna ? GO:0002181 ... P62280 37802027
    855758 8ppk:M (2.98) BS01 rna ? GO:0002181 ... P25398 37802027
    855759 8ppk:N (2.98) BS01 rna ? GO:0002181 ... P62277 37802027
    855760 8ppk:O (2.98) BS01 rna ? GO:0000028 ... P62263 37802027
    855761 8ppk:P (2.98) BS01 rna ? GO:0000028 ... P62841 37802027
    855762 8ppk:Q (2.98) BS01 rna ? GO:0000462 ... P62249 37802027
    855763 8ppk:R (2.98) BS01 rna ? GO:0002181 ... P08708 37802027
    855764 8ppk:S (2.98) BS01 rna ? GO:0002181 ... P62269 37802027
    855765 8ppk:T (2.98) BS01 rna ? GO:0000028 ... P39019 37802027
    855766 8ppk:U (2.98) BS01 rna ? GO:0002181 ... P60866 37802027
    855767 8ppk:W (2.98) BS01 rna ? GO:0002181 ... P62244 37802027
    855768 8ppk:X (2.98) BS01 rna ? GO:0002181 ... P62266 37802027
    855769 8ppk:Y (2.98) BS01 rna ? GO:0002181 ... P62847 37802027
    855770 8ppk:Z (2.98) BS01 rna ? GO:0002181 ... P62851 37802027
    855771 8ppk:a (2.98) BS01 rna ? GO:0002181 ... P62854 37802027
    855772 8ppk:a (2.98) BS02 ZN ? GO:0002181 ... P62854 37802027
    855773 8ppk:b (2.98) BS01 rna ? GO:0000028 ... P42677 37802027
    855774 8ppk:c (2.98) BS01 rna ? GO:0000028 ... P62857 37802027
    855775 8ppk:d (2.98) BS01 rna ? GO:0002181 ... P62273 37802027
    855776 8ppk:d (2.98) BS02 ZN ? GO:0002181 ... P62273 37802027
    855777 8ppk:e (2.98) BS01 rna ? GO:0002181 ... P62861 37802027
    855778 8ppk:f (2.98) BS01 rna ? GO:0002181 ... P62979 37802027
    855779 8ppk:f (2.98) BS02 ZN ? GO:0002181 ... P62979 37802027
    855780 8ppk:g (2.98) BS01 rna ? GO:0001891 ... P63244 37802027
    855781 8ppk:j (2.98) BS01 rna 2.1.1.57
    3.4.19.12
    3.6.4.12
    3.6.4.13
    N/A A0A088DIE1 37802027
    855782 8ppk:p (2.98) BS01 rna ? GO:0003723 ... P41567 37802027
    855783 8ppl:AA (2.65) BS01 rna ? GO:0000028 ... P08865 37802027
    855784 8ppl:AB (2.65) BS01 rna ? GO:0002181 ... P61247 37802027
    855785 8ppl:AC (2.65) BS01 rna ? GO:0002181 ... P15880 37802027
    855786 8ppl:AC (2.65) BS02 peptide ? GO:0002181 ... P15880 37802027
    855787 8ppl:AD (2.65) BS01 rna 4.2.99.18 GO:0000977 ... P23396 37802027
    855788 8ppl:AD (2.65) BS02 peptide 4.2.99.18 GO:0000977 ... P23396 37802027
    855789 8ppl:AE (2.65) BS01 rna ? GO:0002181 ... P62701 37802027
    855790 8ppl:AF (2.65) BS01 rna ? GO:0000028 ... P46782 37802027
    855791 8ppl:AF (2.65) BS02 MG ? GO:0000028 ... P46782 37802027
    855792 8ppl:AG (2.65) BS01 rna ? GO:0000082 ... P62753 37802027
    855793 8ppl:AH (2.65) BS01 rna ? GO:0001843 ... P62081 37802027
    855794 8ppl:AI (2.65) BS01 rna ? GO:0000462 ... P62241 37802027
    855795 8ppl:AJ (2.65) BS01 rna ? GO:0002181 ... P46781 37802027
    855796 8ppl:AK (2.65) BS01 rna ? GO:0002181 ... P46783 37802027
    855797 8ppl:AL (2.65) BS01 rna ? GO:0002181 ... P62280 37802027
    855798 8ppl:AM (2.65) BS01 rna ? GO:0002181 ... P25398 37802027
    855799 8ppl:AN (2.65) BS01 rna ? GO:0002181 ... P62277 37802027
    855800 8ppl:AO (2.65) BS01 rna ? GO:0000028 ... P62263 37802027

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).