SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    855801 8ppl:AP (2.65) BS01 rna ? GO:0000028 ... P62841 37802027
    855802 8ppl:AP (2.65) BS02 rna ? GO:0000028 ... P62841 37802027
    855803 8ppl:AQ (2.65) BS01 rna ? GO:0000462 ... P62249 37802027
    855804 8ppl:AR (2.65) BS01 rna ? GO:0002181 ... P08708 37802027
    855805 8ppl:AS (2.65) BS01 rna ? GO:0002181 ... P62269 37802027
    855806 8ppl:AS (2.65) BS02 MG ? GO:0002181 ... P62269 37802027
    855807 8ppl:AS (2.65) BS03 MG ? GO:0002181 ... P62269 37802027
    855808 8ppl:AT (2.65) BS01 rna ? GO:0000028 ... P39019 37802027
    855809 8ppl:AU (2.65) BS01 rna ? GO:0002181 ... P60866 37802027
    855810 8ppl:AW (2.65) BS01 rna ? GO:0002181 ... P62244 37802027
    855811 8ppl:AX (2.65) BS01 rna ? GO:0003735 ... A0A4W2DI10 37802027
    855812 8ppl:AY (2.65) BS01 rna ? GO:0002181 ... P62847 37802027
    855813 8ppl:AZ (2.65) BS01 rna ? GO:0002181 ... P62851 37802027
    855814 8ppl:Aa (2.65) BS01 rna ? GO:0002181 ... P62854 37802027
    855815 8ppl:Aa (2.65) BS02 ZN ? GO:0002181 ... P62854 37802027
    855816 8ppl:Ab (2.65) BS01 rna ? GO:0000028 ... P42677 37802027
    855817 8ppl:Ac (2.65) BS01 rna ? GO:0000028 ... P62857 37802027
    855818 8ppl:Ad (2.65) BS01 rna ? GO:0002181 ... P62273 37802027
    855819 8ppl:Ad (2.65) BS02 ZN ? GO:0002181 ... P62273 37802027
    855820 8ppl:Ae (2.65) BS01 rna ? GO:0002181 ... P62861 37802027
    855821 8ppl:Ae (2.65) BS02 peptide ? GO:0002181 ... P62861 37802027
    855822 8ppl:Af (2.65) BS01 rna ? GO:0002181 ... P62979 37802027
    855823 8ppl:Af (2.65) BS02 ZN ? GO:0002181 ... P62979 37802027
    855824 8ppl:Ag (2.65) BS01 rna ? GO:0001891 ... P63244 37802027
    855825 8ppl:Ip (2.65) BS01 rna ? GO:0003723 ... P41567 37802027
    855826 8ppl:Iq (2.65) BS01 rna ? GO:0000049 ... P47813 37802027
    855827 8ppl:Ir (2.65) BS01 rna ? GO:0000423 ... P05198 37802027
    855828 8ppl:Is (2.65) BS01 rna ? GO:0001701 ... P20042 37802027
    855829 8ppl:Is (2.65) BS02 rna ? GO:0001701 ... P20042 37802027
    855830 8ppl:Is (2.65) BS03 ZN ? GO:0001701 ... P20042 37802027
    855831 8ppl:Is (2.65) BS04 GTP ? GO:0001701 ... P20042 37802027
    855832 8ppl:It (2.65) BS01 rna 3.6.5.3 GO:0000049 ... P41091 37802027
    855833 8ppl:It (2.65) BS02 GTP 3.6.5.3 GO:0000049 ... P41091 37802027
    855834 8ppl:It (2.65) BS03 MG 3.6.5.3 GO:0000049 ... P41091 37802027
    855835 8ppl:It (2.65) BS04 MET 3.6.5.3 GO:0000049 ... P41091 37802027
    855836 8ppl:Ix (2.65) BS01 rna ? GO:0001732 ... O15371 37802027
    855837 8ppl:Iy (2.65) BS01 rna ? GO:0001732 ... Q99613 37802027
    855838 8ppn:A (1.8) BS01 GAL ? GO:0030246 ... P17931 37658813
    855839 8ppn:A (1.8) BS02 YIO ? GO:0030246 ... P17931 37658813
    855840 8ppp:A (2.57) BS01 APC ? GO:0016877 ... A0A1M5ABR5 38269041
    855841 8ppp:B (2.57) BS01 APC ? GO:0016877 ... A0A1M5ABR5 38269041
    855842 8pps:A (2.3) BS01 MG ? GO:0071111 ... Q9I580 39247681
    855843 8pps:B (2.3) BS01 MG ? GO:0071111 ... Q9I580 39247681
    855844 8ppt:A (2.9) BS01 dna 2.7.7.7
    3.1.11.1    		 GO:0003676 ... Q9V2F3 38097591
    855845 8ppt:A (2.9) BS02 MG 2.7.7.7
    3.1.11.1    		 GO:0003676 ... Q9V2F3 38097591
    855846 8ppt:A (2.9) BS03 MG 2.7.7.7
    3.1.11.1    		 GO:0003676 ... Q9V2F3 38097591
    855847 8ppt:B (2.9) BS01 dna 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855848 8ppt:B (2.9) BS02 ZN 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855849 8ppt:B (2.9) BS03 ZN 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855850 8ppt:B (2.9) BS04 ZN 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855851 8ppt:B (2.9) BS05 MG 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855852 8ppu:A (3.02) BS01 dna 2.7.7.7
    3.1.11.1    		 GO:0003676 ... Q9V2F3 38097591
    855853 8ppu:A (3.02) BS02 MG 2.7.7.7
    3.1.11.1    		 GO:0003676 ... Q9V2F3 38097591
    855854 8ppu:A (3.02) BS03 MG 2.7.7.7
    3.1.11.1    		 GO:0003676 ... Q9V2F3 38097591
    855855 8ppu:B (3.02) BS01 dna 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855856 8ppu:B (3.02) BS02 dna 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855857 8ppu:B (3.02) BS03 ZN 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855858 8ppu:B (3.02) BS04 ZN 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855859 8ppu:B (3.02) BS05 ZN 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855860 8ppu:B (3.02) BS06 MG 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855861 8ppv:A (3.02) BS01 dna 2.7.7.7
    3.1.11.1    		 GO:0003676 ... Q9V2F3 38097591
    855862 8ppv:A (3.02) BS02 MG 2.7.7.7
    3.1.11.1    		 GO:0003676 ... Q9V2F3 38097591
    855863 8ppv:A (3.02) BS03 MG 2.7.7.7
    3.1.11.1    		 GO:0003676 ... Q9V2F3 38097591
    855864 8ppv:B (3.02) BS01 dna 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855865 8ppv:B (3.02) BS02 ZN 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855866 8ppv:B (3.02) BS03 ZN 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855867 8ppv:B (3.02) BS04 ZN 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855868 8ppv:B (3.02) BS05 MG 2.7.7.7
    3.1.11.1    		 GO:0003677 ... Q9V2F4 38097591
    855869 8ppw:A (1.53) BS01 86F 3.1.2.-
    3.5.1.-
    3.5.1.124    		 GO:0000785 ... Q99497 38239128
    855870 8ppx:A (2.5) BS01 MN N/A N/A C3W5X6 N/A
    855871 8ppx:A (2.5) BS02 MG N/A N/A C3W5X6 N/A
    855872 8ppx:A (2.5) BS03 85W N/A N/A C3W5X6 N/A
    855873 8ppz:A (1.85) BS01 0AN 5.2.1.8 GO:0003007 ... P62942 N/A
    855874 8ppz:B (1.85) BS01 0AN 2.7.11.1 GO:0044877 ... P42345 N/A
    855875 8pq0:A (1.48) BS01 8RX 3.1.2.-
    3.5.1.-
    3.5.1.124    		 GO:0000785 ... Q99497 38239128
    855876 8pq5:A (4.4) BS01 ATP N/A GO:0005524 ... Q14683 N/A
    855877 8pq5:A (4.4) BS02 ATP N/A GO:0005524 ... Q14683 N/A
    855878 8pq5:B (4.4) BS01 ATP N/A GO:0005524 ... Q9UQE7 N/A
    855879 8pq5:B (4.4) BS02 ATP N/A GO:0005524 ... Q9UQE7 N/A
    855880 8pq7:A (2.1) BS01 MN 3.1.3.16 GO:0004721 ... M1C5B8 37921637
    855881 8pq7:A (2.1) BS02 MN 3.1.3.16 GO:0004721 ... M1C5B8 37921637
    855882 8pq7:C (2.1) BS01 MN 3.1.3.16 GO:0004721 ... M1C5B8 37921637
    855883 8pq7:C (2.1) BS02 MN 3.1.3.16 GO:0004721 ... M1C5B8 37921637
    855884 8pq9:A (1.7) BS01 9JI 2.7.10.1 GO:0004672 ... P10721 38167404
    855885 8pq9:C (1.7) BS01 9JI 2.7.10.1 GO:0004672 ... P10721 38167404
    855886 8pqa:A (1.65) BS01 98A 2.7.10.1 GO:0004672 ... P10721 38167404
    855887 8pqa:C (1.65) BS01 98A 2.7.10.1 GO:0004672 ... P10721 38167404
    855888 8pqb:A (1.87) BS01 9XO 2.7.10.1 GO:0004672 ... P10721 38167404
    855889 8pqc:A (1.77) BS01 9OO 2.7.10.1 GO:0004672 ... P10721 38167404
    855890 8pqc:B (1.77) BS01 9OO 2.7.10.1 GO:0004672 ... P10721 38167404
    855891 8pqd:A (1.5) BS01 9VV 2.7.10.1 GO:0004672 ... P10721 38167404
    855892 8pqd:B (1.5) BS01 9VV 2.7.10.1 GO:0004672 ... P10721 38167404
    855893 8pqe:A (2.0) BS01 9WU 2.7.10.1 GO:0004672 ... P10721 38167404
    855894 8pqe:B (2.0) BS01 9WU 2.7.10.1 GO:0004672 ... P10721 38167404
    855895 8pqf:A (1.9) BS01 9KI 2.7.10.1 GO:0004672 ... P10721 38167404
    855896 8pqf:C (1.9) BS01 9KI 2.7.10.1 GO:0004672 ... P10721 38167404
    855897 8pqg:A (2.4) BS01 9JI 2.7.10.1 GO:0004672 ... P10721 38167404
    855898 8pqg:C (2.4) BS01 9JI 2.7.10.1 GO:0004672 ... P10721 38167404
    855899 8pqh:A (2.5) BS01 9JI 2.7.10.1 GO:0004672 ... P16234 38167404
    855900 8pqi:A (2.6) BS01 9OO 2.7.10.1 GO:0004672 ... P16234 38167404
    855901 8pql:C (3.76) BS01 SY8 2.3.2.23 GO:0000209 ... Q712K3 38326650
    855902 8pql:K (3.76) BS01 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 38326650
    855903 8pql:K (3.76) BS02 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 38326650
    855904 8pql:K (3.76) BS03 ZN 2.3.2.27
    2.3.2.32    		 GO:0000165 ... P62877 38326650
    855905 8pqn:A (3.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38153885
    855906 8pqn:A (3.8) BS02 978 1.6.5.2 GO:0000209 ... P15559 38153885
    855907 8pqn:B (3.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38153885
    855908 8pqn:B (3.8) BS02 978 1.6.5.2 GO:0000209 ... P15559 38153885
    855909 8pqn:C (3.8) BS01 978 1.6.5.2 GO:0000209 ... P15559 38153885
    855910 8pqn:C (3.8) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 38153885
    855911 8pqn:D (3.8) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38153885
    855912 8pqo:C (2.3) BS01 GOL ? N/A N/A N/A
    855913 8pqo:C (2.3) BS02 GOL ? N/A N/A N/A
    855914 8pqo:C (2.3) BS03 F8O ? N/A N/A N/A
    855915 8pqo:C (2.3) BS04 FDO ? N/A N/A N/A
    855916 8pqo:C (2.3) BS05 MV9 ? N/A N/A N/A
    855917 8pqo:C (2.3) BS06 UYA ? N/A N/A N/A
    855918 8pqo:C (2.3) BS07 FH6 ? N/A N/A N/A
    855919 8pqp:A (1.709) BS01 IMH ? GO:0009159 ... K9TVX3 38449528
    855920 8pqq:A (2.23) BS01 CFB ? GO:0009159 ... K9TVX3 38449528
    855921 8pqq:A (2.23) BS02 CFB ? GO:0009159 ... K9TVX3 38449528
    855922 8pqq:B (2.23) BS01 CFB ? GO:0009159 ... K9TVX3 38449528
    855923 8pqq:B (2.23) BS02 CFB ? GO:0009159 ... K9TVX3 38449528
    855924 8pqq:C (2.23) BS01 CFB ? GO:0009159 ... K9TVX3 38449528
    855925 8pqq:C (2.23) BS02 CFB ? GO:0009159 ... K9TVX3 38449528
    855926 8pqq:D (2.23) BS01 CFB ? GO:0009159 ... K9TVX3 38449528
    855927 8pqq:D (2.23) BS02 CFB ? GO:0009159 ... K9TVX3 38449528
    855928 8pqr:A (1.586) BS01 DIH ? GO:0009159 ... K9TVX3 38449528
    855929 8pqr:A (1.586) BS02 DIH ? GO:0009159 ... K9TVX3 38449528
    855930 8pqr:B (1.586) BS01 DIH ? GO:0009159 ... K9TVX3 38449528
    855931 8pqr:B (1.586) BS02 DIH ? GO:0009159 ... K9TVX3 38449528
    855932 8pqr:C (1.586) BS01 DIH ? GO:0009159 ... K9TVX3 38449528
    855933 8pqr:C (1.586) BS02 DIH ? GO:0009159 ... K9TVX3 38449528
    855934 8pqr:D (1.586) BS01 DIH ? GO:0009159 ... K9TVX3 38449528
    855935 8pqr:D (1.586) BS02 DIH ? GO:0009159 ... K9TVX3 38449528
    855936 8pqw:A (4.2) BS01 ADP ? GO:0003723 ... Q14204 38547289
    855937 8pqw:A (4.2) BS02 MG ? GO:0003723 ... Q14204 38547289
    855938 8pqw:A (4.2) BS03 ATP ? GO:0003723 ... Q14204 38547289
    855939 8pqw:A (4.2) BS04 MG ? GO:0003723 ... Q14204 38547289
    855940 8pqw:A (4.2) BS05 ADP ? GO:0003723 ... Q14204 38547289
    855941 8pqw:A (4.2) BS06 ADP ? GO:0003723 ... Q14204 38547289
    855942 8pqx:A (3.3) BS01 ATP 3.6.4.6 GO:0000502 ... P55072 38947518
    855943 8pqx:A (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855944 8pqx:B (3.3) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855945 8pqx:B (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855946 8pqx:C (3.3) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855947 8pqx:C (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855948 8pqx:D (3.3) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855949 8pqx:D (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855950 8pqx:E (3.3) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855951 8pqx:E (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855952 8pqx:F (3.3) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855953 8pqx:F (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 38947518
    855954 8pqy:A (3.8) BS01 ADP ? GO:0003723 ... Q14204 38547289
    855955 8pqy:A (3.8) BS02 MG ? GO:0003723 ... Q14204 38547289
    855956 8pqy:A (3.8) BS03 ATP ? GO:0003723 ... Q14204 38547289
    855957 8pqy:A (3.8) BS04 MG ? GO:0003723 ... Q14204 38547289
    855958 8pqy:A (3.8) BS05 ADP ? GO:0003723 ... Q14204 38547289
    855959 8pqy:A (3.8) BS06 ADP ? GO:0003723 ... Q14204 38547289
    855960 8pqz:A (5.5) BS01 ADP ? GO:0003723 ... Q14204 38547289
    855961 8pqz:A (5.5) BS02 ATP ? GO:0003723 ... Q14204 38547289
    855962 8pqz:A (5.5) BS03 ADP ? GO:0003723 ... Q14204 38547289
    855963 8pqz:A (5.5) BS04 ADP ? GO:0003723 ... Q14204 38547289
    855964 8pqz:J (5.5) BS01 ADP ? GO:0003723 ... Q14204 38547289
    855965 8pqz:J (5.5) BS02 ATP ? GO:0003723 ... Q14204 38547289
    855966 8pqz:J (5.5) BS03 ADP ? GO:0003723 ... Q14204 38547289
    855967 8pqz:J (5.5) BS04 ADP ? GO:0003723 ... Q14204 38547289
    855968 8pr2:f (3.8) BS01 peptide ? GO:0003723 ... Q14204 38547289
    855969 8pr4:J (3.5) BS01 ATP ? GO:0005737 ... I3LHK5 38547289
    855970 8pr4:Y (3.5) BS01 ZN ? GO:0001725 ... A0A4X1TB62 38547289
    855971 8pr4:Y (3.5) BS02 ZN ? GO:0001725 ... A0A4X1TB62 38547289
    855972 8pr4:Y (3.5) BS03 ZN ? GO:0001725 ... A0A4X1TB62 38547289
    855973 8pr7:A (2.76) BS01 ADP N/A GO:0004672 ... O14965 39327527
    855974 8pr7:D (2.76) BS01 peptide N/A GO:0004672 ... O14965 39327527
    855975 8pr7:D (2.76) BS02 ADP N/A GO:0004672 ... O14965 39327527
    855976 8prk:A (1.85) BS01 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    855977 8prk:A (1.85) BS02 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    855978 8prk:A (1.85) BS03 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    855979 8prk:A (1.85) BS04 PO4 3.6.1.1 GO:0000287 ... P00817 9878371
    855980 8prk:B (1.85) BS01 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    855981 8prk:B (1.85) BS02 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    855982 8prk:B (1.85) BS03 MN 3.6.1.1 GO:0000287 ... P00817 9878371
    855983 8prk:B (1.85) BS04 PO4 3.6.1.1 GO:0000287 ... P00817 9878371
    855984 8prm:B (2.2) BS01 IR0 N/A N/A B5YBJ6 N/A
    855985 8prm:C (2.2) BS01 IR0 N/A N/A B5YBJ6 N/A
    855986 8prm:D (2.2) BS01 IR0 N/A N/A B5YBJ6 N/A
    855987 8prn:A (2.3) BS01 C8E ? GO:0006811 ... P39767 9684893
    855988 8pro:A (1.7) BS01 IR0 N/A N/A B5YBJ6 N/A
    855989 8prv:A (2.9) BS01 NAP 1.1.1.100
    2.3.1.41
    2.3.1.86    		 GO:0000287 ... P19097 37949058
    855990 8prv:A (2.9) BS02 A5S 1.1.1.100
    2.3.1.41
    2.3.1.86    		 GO:0000287 ... P19097 37949058
    855991 8prv:B (2.9) BS01 A5S 1.1.1.100
    2.3.1.41
    2.3.1.86    		 GO:0000287 ... P19097 37949058
    855992 8prv:G (2.9) BS01 FMN 1.3.1.9
    2.3.1.38
    2.3.1.39
    2.3.1.86
    3.1.2.14
    4.2.1.59    		 GO:0004312 ... P07149 37949058
    855993 8prv:G (2.9) BS02 NAP 1.3.1.9
    2.3.1.38
    2.3.1.39
    2.3.1.86
    3.1.2.14
    4.2.1.59    		 GO:0004312 ... P07149 37949058
    855994 8prv:G (2.9) BS03 COA 1.3.1.9
    2.3.1.38
    2.3.1.39
    2.3.1.86
    3.1.2.14
    4.2.1.59    		 GO:0004312 ... P07149 37949058
    855995 8prw:A (1.9) BS01 NAP 1.1.1.100
    2.3.1.41
    2.3.1.86    		 GO:0000287 ... P19097 37949058
    855996 8prw:B (1.9) BS01 NAP 1.1.1.100
    2.3.1.41
    2.3.1.86    		 GO:0000287 ... P19097 37949058
    855997 8prw:C (1.9) BS01 NAP 1.1.1.100
    2.3.1.41
    2.3.1.86    		 GO:0000287 ... P19097 37949058
    855998 8prw:D (1.9) BS01 NAP 1.1.1.100
    2.3.1.41
    2.3.1.86    		 GO:0000287 ... P19097 37949058
    855999 8prw:E (1.9) BS01 NAP 1.1.1.100
    2.3.1.41
    2.3.1.86    		 GO:0000287 ... P19097 37949058
    856000 8prw:F (1.9) BS01 NAP 1.1.1.100
    2.3.1.41
    2.3.1.86    		 GO:0000287 ... P19097 37949058
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).