SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    856401 8pv2:Cb (2.63) BS02 ZN ? GO:0003676 ... G0SB32 37921038
    856402 8pv2:Cd (2.63) BS01 rna ? GO:0005525 ... G0SBX1 37921038
    856403 8pv2:Cd (2.63) BS02 GTP ? GO:0005525 ... G0SBX1 37921038
    856404 8pv2:Cd (2.63) BS03 MG ? GO:0005525 ... G0SBX1 37921038
    856405 8pv2:Cd (2.63) BS04 MG ? GO:0005525 ... G0SBX1 37921038
    856406 8pv2:Cf (2.63) BS01 rna ? GO:0000027 ... G0SF80 37921038
    856407 8pv2:Cf (2.63) BS02 rna ? GO:0000027 ... G0SF80 37921038
    856408 8pv2:Cg (2.63) BS01 rna ? GO:0005634 ... G0SCH6 37921038
    856409 8pv2:Cz (2.63) BS01 rna ? GO:0005634 ... G0SCP3 37921038
    856410 8pv2:Cz (2.63) BS02 rna ? GO:0005634 ... G0SCP3 37921038
    856411 8pv2:LA (2.63) BS01 rna ? GO:0002181 ... G0S4P8 37921038
    856412 8pv2:LB (2.63) BS01 rna ? GO:0003723 ... G0RXW1 37921038
    856413 8pv2:LC (2.63) BS01 rna ? GO:0003735 ... G0SFC3 37921038
    856414 8pv2:LC (2.63) BS02 rna ? GO:0003735 ... G0SFC3 37921038
    856415 8pv2:LD (2.63) BS01 rna ? GO:0000027 ... G0SEG2 37921038
    856416 8pv2:LD (2.63) BS02 rna ? GO:0000027 ... G0SEG2 37921038
    856417 8pv2:LE (2.63) BS01 rna ? GO:0000027 ... G0S0D6 37921038
    856418 8pv2:LF (2.63) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856419 8pv2:LG (2.63) BS01 rna ? GO:0003723 ... G0SAJ9 37921038
    856420 8pv2:LG (2.63) BS02 rna ? GO:0003723 ... G0SAJ9 37921038
    856421 8pv2:LH (2.63) BS01 rna N/A GO:0003735 ... N/A 37921038
    856422 8pv2:LJ (2.63) BS01 rna ? GO:0003735 ... G0SHQ2 37921038
    856423 8pv2:LJ (2.63) BS02 rna ? GO:0003735 ... G0SHQ2 37921038
    856424 8pv2:LK (2.63) BS01 rna ? GO:0003735 ... G0SGH8 37921038
    856425 8pv2:LL (2.63) BS01 rna ? GO:0003723 ... G0S992 37921038
    856426 8pv2:LL (2.63) BS02 rna ? GO:0003723 ... G0S992 37921038
    856427 8pv2:LM (2.63) BS01 rna ? GO:0003723 ... G0S1R0 37921038
    856428 8pv2:LN (2.63) BS01 rna ? GO:0002181 ... G0RZ88 37921038
    856429 8pv2:LN (2.63) BS02 rna ? GO:0002181 ... G0RZ88 37921038
    856430 8pv2:LO (2.63) BS01 rna ? GO:0003729 ... G0SH61 37921038
    856431 8pv2:LP (2.63) BS01 rna ? GO:0002181 ... G0SGY1 37921038
    856432 8pv2:LP (2.63) BS02 rna ? GO:0002181 ... G0SGY1 37921038
    856433 8pv2:LQ (2.63) BS01 rna ? GO:0003723 ... G0S9B5 37921038
    856434 8pv2:LR (2.63) BS01 rna ? GO:0003735 ... G0S9T3 37921038
    856435 8pv2:LS (2.63) BS01 rna ? GO:0003735 ... G0SCE2 37921038
    856436 8pv2:LT (2.63) BS01 rna ? GO:0003735 ... G0S0Z3 37921038
    856437 8pv2:LU (2.63) BS01 rna ? GO:0002181 ... G0SDS8 37921038
    856438 8pv2:LV (2.63) BS01 rna ? GO:0003735 ... G0SI44 37921038
    856439 8pv2:LX (2.63) BS01 rna ? GO:0003735 ... G0S507 37921038
    856440 8pv2:LX (2.63) BS02 rna ? GO:0003735 ... G0S507 37921038
    856441 8pv2:LY (2.63) BS01 rna ? GO:0003723 ... G0RYN9 37921038
    856442 8pv2:LY (2.63) BS02 rna ? GO:0003723 ... G0RYN9 37921038
    856443 8pv2:LZ (2.63) BS01 rna ? GO:0003735 ... G0RZE9 37921038
    856444 8pv2:La (2.63) BS01 rna N/A GO:0003735 ... N/A 37921038
    856445 8pv2:Lc (2.63) BS01 rna ? GO:0003723 ... G0SEI0 37921038
    856446 8pv2:Ld (2.63) BS01 rna ? GO:0002181 ... G0SD68 37921038
    856447 8pv2:Le (2.63) BS01 rna ? GO:0003735 ... G0S6V4 37921038
    856448 8pv2:Lf (2.63) BS01 rna ? GO:0003735 ... G0SCL3 37921038
    856449 8pv2:Lg (2.63) BS01 rna ? GO:0003735 ... G0SFN0 37921038
    856450 8pv2:Lg (2.63) BS02 ZN ? GO:0003735 ... G0SFN0 37921038
    856451 8pv2:Lh (2.63) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856452 8pv2:Lh (2.63) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856453 8pv2:Li (2.63) BS01 rna ? GO:0003735 ... G0SBN1 37921038
    856454 8pv2:Lj (2.63) BS01 rna ? GO:0003723 ... G0S101 37921038
    856455 8pv2:Lj (2.63) BS02 rna ? GO:0003723 ... G0S101 37921038
    856456 8pv2:Lj (2.63) BS03 ZN ? GO:0003723 ... G0S101 37921038
    856457 8pv2:Lk (2.63) BS01 rna ? GO:0003735 ... G0SG89 37921038
    856458 8pv2:Ll (2.63) BS01 rna ? GO:0003735 ... Q2H9R2 37921038
    856459 8pv2:Ll (2.63) BS02 rna ? GO:0003735 ... Q2H9R2 37921038
    856460 8pv2:Lp (2.63) BS01 rna ? GO:0003735 ... G0S6B0 37921038
    856461 8pv2:Lp (2.63) BS02 ZN ? GO:0003735 ... G0S6B0 37921038
    856462 8pv2:Lq (2.63) BS01 rna ? GO:0003735 ... G0SHJ6 37921038
    856463 8pv3:CB (2.8) BS01 rna ? N/A G0S7X0 37921038
    856464 8pv3:CF (2.8) BS01 rna ? GO:0000027 ... G0S616 37921038
    856465 8pv3:CH (2.8) BS01 rna ? GO:0005525 ... G0S8F1 37921038
    856466 8pv3:CH (2.8) BS02 rna ? GO:0005525 ... G0S8F1 37921038
    856467 8pv3:CH (2.8) BS03 GTP ? GO:0005525 ... G0S8F1 37921038
    856468 8pv3:CH (2.8) BS04 MG ? GO:0005525 ... G0S8F1 37921038
    856469 8pv3:CI (2.8) BS01 rna ? GO:0003676 ... G0S1H0 37921038
    856470 8pv3:CJ (2.8) BS01 rna ? GO:0000463 ... G0SHX6 37921038
    856471 8pv3:CJ (2.8) BS02 rna ? GO:0000463 ... G0SHX6 37921038
    856472 8pv3:CK (2.8) BS01 rna ? GO:0005634 ... G0S081 37921038
    856473 8pv3:CL (2.8) BS01 rna ? GO:0005525 ... G0SEW3 37921038
    856474 8pv3:CM (2.8) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856475 8pv3:CM (2.8) BS02 rna ? GO:0000463 ... G0SFL0 37921038
    856476 8pv3:CO (2.8) BS01 rna ? GO:0030687 ... G0SHK0 37921038
    856477 8pv3:CQ (2.8) BS01 rna ? GO:0003735 ... G0S497 37921038
    856478 8pv3:CQ (2.8) BS02 ZN ? GO:0003735 ... G0S497 37921038
    856479 8pv3:Cb (2.8) BS01 rna ? GO:0003676 ... G0SB32 37921038
    856480 8pv3:Cb (2.8) BS02 ZN ? GO:0003676 ... G0SB32 37921038
    856481 8pv3:Cd (2.8) BS01 rna ? GO:0005525 ... G0SBX1 37921038
    856482 8pv3:Cd (2.8) BS02 MG ? GO:0005525 ... G0SBX1 37921038
    856483 8pv3:Cd (2.8) BS03 MG ? GO:0005525 ... G0SBX1 37921038
    856484 8pv3:Cd (2.8) BS04 GTP ? GO:0005525 ... G0SBX1 37921038
    856485 8pv3:Ce (2.8) BS01 rna ? GO:0000027 ... G0S495 37921038
    856486 8pv3:Ce (2.8) BS02 rna ? GO:0000027 ... G0S495 37921038
    856487 8pv3:Ce (2.8) BS03 rna ? GO:0000027 ... G0S495 37921038
    856488 8pv3:Cf (2.8) BS01 rna ? GO:0000027 ... G0SF80 37921038
    856489 8pv3:Cf (2.8) BS02 rna ? GO:0000027 ... G0SF80 37921038
    856490 8pv3:Cg (2.8) BS01 rna ? GO:0005634 ... G0SCH6 37921038
    856491 8pv3:Cz (2.8) BS01 rna ? GO:0005634 ... G0SCP3 37921038
    856492 8pv3:Cz (2.8) BS02 rna ? GO:0005634 ... G0SCP3 37921038
    856493 8pv3:LA (2.8) BS01 rna ? GO:0002181 ... G0S4P8 37921038
    856494 8pv3:LB (2.8) BS01 rna ? GO:0003723 ... G0RXW1 37921038
    856495 8pv3:LC (2.8) BS01 rna ? GO:0003735 ... G0SFC3 37921038
    856496 8pv3:LC (2.8) BS02 rna ? GO:0003735 ... G0SFC3 37921038
    856497 8pv3:LD (2.8) BS01 rna ? GO:0000027 ... G0SEG2 37921038
    856498 8pv3:LD (2.8) BS02 rna ? GO:0000027 ... G0SEG2 37921038
    856499 8pv3:LE (2.8) BS01 rna ? GO:0000027 ... G0S0D6 37921038
    856500 8pv3:LF (2.8) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856501 8pv3:LG (2.8) BS01 rna ? GO:0003723 ... G0SAJ9 37921038
    856502 8pv3:LG (2.8) BS02 rna ? GO:0003723 ... G0SAJ9 37921038
    856503 8pv3:LG (2.8) BS03 rna ? GO:0003723 ... G0SAJ9 37921038
    856504 8pv3:LH (2.8) BS01 rna N/A GO:0003735 ... N/A 37921038
    856505 8pv3:LJ (2.8) BS01 rna ? GO:0003735 ... G0SHQ2 37921038
    856506 8pv3:LJ (2.8) BS02 rna ? GO:0003735 ... G0SHQ2 37921038
    856507 8pv3:LK (2.8) BS01 rna ? GO:0003735 ... G0SGH8 37921038
    856508 8pv3:LL (2.8) BS01 rna ? GO:0003723 ... G0S992 37921038
    856509 8pv3:LL (2.8) BS02 rna ? GO:0003723 ... G0S992 37921038
    856510 8pv3:LM (2.8) BS01 rna ? GO:0003723 ... G0S1R0 37921038
    856511 8pv3:LN (2.8) BS01 rna ? GO:0002181 ... G0RZ88 37921038
    856512 8pv3:LN (2.8) BS02 rna ? GO:0002181 ... G0RZ88 37921038
    856513 8pv3:LO (2.8) BS01 rna ? GO:0003729 ... G0SH61 37921038
    856514 8pv3:LP (2.8) BS01 rna ? GO:0002181 ... G0SGY1 37921038
    856515 8pv3:LP (2.8) BS02 rna ? GO:0002181 ... G0SGY1 37921038
    856516 8pv3:LQ (2.8) BS01 rna ? GO:0003723 ... G0S9B5 37921038
    856517 8pv3:LR (2.8) BS01 rna ? GO:0003735 ... G0S9T3 37921038
    856518 8pv3:LS (2.8) BS01 rna ? GO:0003735 ... G0SCE2 37921038
    856519 8pv3:LT (2.8) BS01 rna ? GO:0003735 ... G0S0Z3 37921038
    856520 8pv3:LU (2.8) BS01 rna ? GO:0002181 ... G0SDS8 37921038
    856521 8pv3:LV (2.8) BS01 rna ? GO:0003735 ... G0SI44 37921038
    856522 8pv3:LX (2.8) BS01 rna ? GO:0003735 ... G0S507 37921038
    856523 8pv3:LX (2.8) BS02 rna ? GO:0003735 ... G0S507 37921038
    856524 8pv3:LY (2.8) BS01 rna ? GO:0003723 ... G0RYN9 37921038
    856525 8pv3:LY (2.8) BS02 rna ? GO:0003723 ... G0RYN9 37921038
    856526 8pv3:LZ (2.8) BS01 rna ? GO:0003735 ... G0RZE9 37921038
    856527 8pv3:La (2.8) BS01 rna N/A GO:0003735 ... N/A 37921038
    856528 8pv3:Lc (2.8) BS01 rna ? GO:0003723 ... G0SEI0 37921038
    856529 8pv3:Ld (2.8) BS01 rna ? GO:0002181 ... G0SD68 37921038
    856530 8pv3:Le (2.8) BS01 rna ? GO:0003735 ... G0S6V4 37921038
    856531 8pv3:Lf (2.8) BS01 rna ? GO:0003735 ... G0SCL3 37921038
    856532 8pv3:Lg (2.8) BS01 rna ? GO:0003735 ... G0SFN0 37921038
    856533 8pv3:Lg (2.8) BS02 ZN ? GO:0003735 ... G0SFN0 37921038
    856534 8pv3:Lh (2.8) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856535 8pv3:Lh (2.8) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856536 8pv3:Li (2.8) BS01 rna ? GO:0003735 ... G0SBN1 37921038
    856537 8pv3:Lj (2.8) BS01 rna ? GO:0003723 ... G0S101 37921038
    856538 8pv3:Lj (2.8) BS02 rna ? GO:0003723 ... G0S101 37921038
    856539 8pv3:Lj (2.8) BS03 ZN ? GO:0003723 ... G0S101 37921038
    856540 8pv3:Lk (2.8) BS01 rna ? GO:0003735 ... G0SG89 37921038
    856541 8pv3:Ll (2.8) BS01 rna ? GO:0003735 ... Q2H9R2 37921038
    856542 8pv3:Ll (2.8) BS02 rna ? GO:0003735 ... Q2H9R2 37921038
    856543 8pv3:Lp (2.8) BS01 rna ? GO:0003735 ... G0S6B0 37921038
    856544 8pv3:Lp (2.8) BS02 ZN ? GO:0003735 ... G0S6B0 37921038
    856545 8pv3:Lq (2.8) BS01 rna ? GO:0003735 ... G0SHJ6 37921038
    856546 8pv4:CB (2.9) BS01 rna ? N/A G0S7X0 37921038
    856547 8pv4:CF (2.9) BS01 rna ? GO:0000027 ... G0S616 37921038
    856548 8pv4:CH (2.9) BS01 rna ? GO:0005525 ... G0S8F1 37921038
    856549 8pv4:CH (2.9) BS02 rna ? GO:0005525 ... G0S8F1 37921038
    856550 8pv4:CH (2.9) BS03 GTP ? GO:0005525 ... G0S8F1 37921038
    856551 8pv4:CH (2.9) BS04 MG ? GO:0005525 ... G0S8F1 37921038
    856552 8pv4:CI (2.9) BS01 rna ? GO:0003676 ... G0S1H0 37921038
    856553 8pv4:CJ (2.9) BS01 rna ? GO:0000463 ... G0SHX6 37921038
    856554 8pv4:CJ (2.9) BS02 rna ? GO:0000463 ... G0SHX6 37921038
    856555 8pv4:CK (2.9) BS01 rna ? GO:0005634 ... G0S081 37921038
    856556 8pv4:CL (2.9) BS01 rna ? GO:0005525 ... G0SEW3 37921038
    856557 8pv4:CM (2.9) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856558 8pv4:CN (2.9) BS01 rna ? GO:0000054 ... G0S683 37921038
    856559 8pv4:CO (2.9) BS01 rna ? GO:0030687 ... G0SHK0 37921038
    856560 8pv4:CQ (2.9) BS01 rna ? GO:0003735 ... G0S497 37921038
    856561 8pv4:CQ (2.9) BS02 ZN ? GO:0003735 ... G0S497 37921038
    856562 8pv4:CR (2.9) BS01 rna ? GO:0000055 ... G0S215 37921038
    856563 8pv4:CR (2.9) BS02 rna ? GO:0000055 ... G0S215 37921038
    856564 8pv4:CU (2.9) BS01 rna ? GO:0005634 ... G0S1T5 37921038
    856565 8pv4:CW (2.9) BS01 rna ? GO:0005634 ... G0S5R0 37921038
    856566 8pv4:Cb (2.9) BS01 rna ? GO:0003676 ... G0SB32 37921038
    856567 8pv4:Cb (2.9) BS02 ZN ? GO:0003676 ... G0SB32 37921038
    856568 8pv4:Cd (2.9) BS01 rna ? GO:0005525 ... G0SBX1 37921038
    856569 8pv4:Cd (2.9) BS02 GTP ? GO:0005525 ... G0SBX1 37921038
    856570 8pv4:Cd (2.9) BS03 MG ? GO:0005525 ... G0SBX1 37921038
    856571 8pv4:Cd (2.9) BS04 MG ? GO:0005525 ... G0SBX1 37921038
    856572 8pv4:Ce (2.9) BS01 rna ? GO:0000027 ... G0S495 37921038
    856573 8pv4:Ce (2.9) BS02 rna ? GO:0000027 ... G0S495 37921038
    856574 8pv4:Ce (2.9) BS03 rna ? GO:0000027 ... G0S495 37921038
    856575 8pv4:Cf (2.9) BS01 rna ? GO:0000027 ... G0SF80 37921038
    856576 8pv4:Cf (2.9) BS02 rna ? GO:0000027 ... G0SF80 37921038
    856577 8pv4:Cg (2.9) BS01 rna ? GO:0005634 ... G0SCH6 37921038
    856578 8pv4:Cz (2.9) BS01 rna ? GO:0005634 ... G0SCP3 37921038
    856579 8pv4:Cz (2.9) BS02 rna ? GO:0005634 ... G0SCP3 37921038
    856580 8pv4:LA (2.9) BS01 rna ? GO:0002181 ... G0S4P8 37921038
    856581 8pv4:LB (2.9) BS01 rna ? GO:0003723 ... G0RXW1 37921038
    856582 8pv4:LC (2.9) BS01 rna ? GO:0003735 ... G0SFC3 37921038
    856583 8pv4:LC (2.9) BS02 rna ? GO:0003735 ... G0SFC3 37921038
    856584 8pv4:LD (2.9) BS01 rna ? GO:0000027 ... G0SEG2 37921038
    856585 8pv4:LD (2.9) BS02 rna ? GO:0000027 ... G0SEG2 37921038
    856586 8pv4:LE (2.9) BS01 rna ? GO:0000027 ... G0S0D6 37921038
    856587 8pv4:LF (2.9) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856588 8pv4:LG (2.9) BS01 rna ? GO:0003723 ... G0SAJ9 37921038
    856589 8pv4:LG (2.9) BS02 rna ? GO:0003723 ... G0SAJ9 37921038
    856590 8pv4:LG (2.9) BS03 rna ? GO:0003723 ... G0SAJ9 37921038
    856591 8pv4:LH (2.9) BS01 rna N/A GO:0003735 ... N/A 37921038
    856592 8pv4:LJ (2.9) BS01 rna ? GO:0003735 ... G0SHQ2 37921038
    856593 8pv4:LJ (2.9) BS02 rna ? GO:0003735 ... G0SHQ2 37921038
    856594 8pv4:LK (2.9) BS01 rna ? GO:0003735 ... G0SGH8 37921038
    856595 8pv4:LL (2.9) BS01 rna ? GO:0003723 ... G0S992 37921038
    856596 8pv4:LL (2.9) BS02 rna ? GO:0003723 ... G0S992 37921038
    856597 8pv4:LM (2.9) BS01 rna ? GO:0003723 ... G0S1R0 37921038
    856598 8pv4:LN (2.9) BS01 rna ? GO:0002181 ... G0RZ88 37921038
    856599 8pv4:LN (2.9) BS02 rna ? GO:0002181 ... G0RZ88 37921038
    856600 8pv4:LO (2.9) BS01 rna ? GO:0003729 ... G0SH61 37921038

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).