SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    856601 8pv4:LP (2.9) BS01 rna ? GO:0002181 ... G0SGY1 37921038
    856602 8pv4:LP (2.9) BS02 rna ? GO:0002181 ... G0SGY1 37921038
    856603 8pv4:LQ (2.9) BS01 rna ? GO:0003723 ... G0S9B5 37921038
    856604 8pv4:LR (2.9) BS01 rna ? GO:0003735 ... G0S9T3 37921038
    856605 8pv4:LS (2.9) BS01 rna ? GO:0003735 ... G0SCE2 37921038
    856606 8pv4:LT (2.9) BS01 rna ? GO:0003735 ... G0S0Z3 37921038
    856607 8pv4:LU (2.9) BS01 rna ? GO:0002181 ... G0SDS8 37921038
    856608 8pv4:LV (2.9) BS01 rna ? GO:0003735 ... G0SI44 37921038
    856609 8pv4:LX (2.9) BS01 rna ? GO:0003735 ... G0S507 37921038
    856610 8pv4:LX (2.9) BS02 rna ? GO:0003735 ... G0S507 37921038
    856611 8pv4:LY (2.9) BS01 rna ? GO:0003723 ... G0RYN9 37921038
    856612 8pv4:LY (2.9) BS02 rna ? GO:0003723 ... G0RYN9 37921038
    856613 8pv4:LZ (2.9) BS01 rna ? GO:0003735 ... G0RZE9 37921038
    856614 8pv4:La (2.9) BS01 rna N/A GO:0003735 ... N/A 37921038
    856615 8pv4:Lc (2.9) BS01 rna ? GO:0003723 ... G0SEI0 37921038
    856616 8pv4:Ld (2.9) BS01 rna ? GO:0002181 ... G0SD68 37921038
    856617 8pv4:Le (2.9) BS01 rna ? GO:0003735 ... G0S6V4 37921038
    856618 8pv4:Lf (2.9) BS01 rna ? GO:0003735 ... G0SCL3 37921038
    856619 8pv4:Lg (2.9) BS01 rna ? GO:0003735 ... G0SFN0 37921038
    856620 8pv4:Lg (2.9) BS02 ZN ? GO:0003735 ... G0SFN0 37921038
    856621 8pv4:Lh (2.9) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856622 8pv4:Lh (2.9) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856623 8pv4:Li (2.9) BS01 rna ? GO:0003735 ... G0SBN1 37921038
    856624 8pv4:Lj (2.9) BS01 rna ? GO:0003723 ... G0S101 37921038
    856625 8pv4:Lj (2.9) BS02 rna ? GO:0003723 ... G0S101 37921038
    856626 8pv4:Lj (2.9) BS03 ZN ? GO:0003723 ... G0S101 37921038
    856627 8pv4:Lk (2.9) BS01 rna ? GO:0003735 ... G0SG89 37921038
    856628 8pv4:Ll (2.9) BS01 rna ? GO:0003735 ... Q2H9R2 37921038
    856629 8pv4:Ll (2.9) BS02 rna ? GO:0003735 ... Q2H9R2 37921038
    856630 8pv4:Lp (2.9) BS01 rna ? GO:0003735 ... G0S6B0 37921038
    856631 8pv4:Lp (2.9) BS02 ZN ? GO:0003735 ... G0S6B0 37921038
    856632 8pv4:Lq (2.9) BS01 rna ? GO:0003735 ... G0SHJ6 37921038
    856633 8pv4:Lr (2.9) BS01 rna ? GO:0003723 ... G0S4Z9 37921038
    856634 8pv5:CF (2.86) BS01 rna ? GO:0000027 ... G0S616 37921038
    856635 8pv5:CH (2.86) BS01 rna ? GO:0005525 ... G0S8F1 37921038
    856636 8pv5:CH (2.86) BS02 rna ? GO:0005525 ... G0S8F1 37921038
    856637 8pv5:CH (2.86) BS03 GTP ? GO:0005525 ... G0S8F1 37921038
    856638 8pv5:CH (2.86) BS04 MG ? GO:0005525 ... G0S8F1 37921038
    856639 8pv5:CK (2.86) BS01 rna ? GO:0005634 ... G0S081 37921038
    856640 8pv5:CL (2.86) BS01 rna ? GO:0005525 ... G0SEW3 37921038
    856641 8pv5:CN (2.86) BS01 rna ? GO:0000054 ... G0S683 37921038
    856642 8pv5:CO (2.86) BS01 rna ? GO:0030687 ... G0SHK0 37921038
    856643 8pv5:CQ (2.86) BS01 rna ? GO:0003735 ... G0S497 37921038
    856644 8pv5:CQ (2.86) BS02 ZN ? GO:0003735 ... G0S497 37921038
    856645 8pv5:Cb (2.86) BS01 rna ? GO:0003676 ... G0SB32 37921038
    856646 8pv5:Cb (2.86) BS02 ZN ? GO:0003676 ... G0SB32 37921038
    856647 8pv5:Cd (2.86) BS01 rna ? GO:0005525 ... G0SBX1 37921038
    856648 8pv5:Cd (2.86) BS02 GTP ? GO:0005525 ... G0SBX1 37921038
    856649 8pv5:Cd (2.86) BS03 MG ? GO:0005525 ... G0SBX1 37921038
    856650 8pv5:Cd (2.86) BS04 MG ? GO:0005525 ... G0SBX1 37921038
    856651 8pv5:Cf (2.86) BS01 rna ? GO:0000027 ... G0SF80 37921038
    856652 8pv5:Cf (2.86) BS02 rna ? GO:0000027 ... G0SF80 37921038
    856653 8pv5:Cg (2.86) BS01 rna ? GO:0005634 ... G0SCH6 37921038
    856654 8pv5:Cz (2.86) BS01 rna ? GO:0005634 ... G0SCP3 37921038
    856655 8pv5:Cz (2.86) BS02 rna ? GO:0005634 ... G0SCP3 37921038
    856656 8pv5:LA (2.86) BS01 rna ? GO:0002181 ... G0S4P8 37921038
    856657 8pv5:LB (2.86) BS01 rna ? GO:0003723 ... G0RXW1 37921038
    856658 8pv5:LC (2.86) BS01 rna ? GO:0003735 ... G0SFC3 37921038
    856659 8pv5:LC (2.86) BS02 rna ? GO:0003735 ... G0SFC3 37921038
    856660 8pv5:LD (2.86) BS01 rna ? GO:0000027 ... G0SEG2 37921038
    856661 8pv5:LD (2.86) BS02 rna ? GO:0000027 ... G0SEG2 37921038
    856662 8pv5:LE (2.86) BS01 rna ? GO:0000027 ... G0S0D6 37921038
    856663 8pv5:LF (2.86) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856664 8pv5:LG (2.86) BS01 rna ? GO:0003723 ... G0SAJ9 37921038
    856665 8pv5:LG (2.86) BS02 rna ? GO:0003723 ... G0SAJ9 37921038
    856666 8pv5:LH (2.86) BS01 rna N/A GO:0003735 ... N/A 37921038
    856667 8pv5:LJ (2.86) BS01 rna ? GO:0003735 ... G0SHQ2 37921038
    856668 8pv5:LJ (2.86) BS02 rna ? GO:0003735 ... G0SHQ2 37921038
    856669 8pv5:LK (2.86) BS01 rna ? GO:0003735 ... G0SGH8 37921038
    856670 8pv5:LL (2.86) BS01 rna ? GO:0003723 ... G0S992 37921038
    856671 8pv5:LL (2.86) BS02 rna ? GO:0003723 ... G0S992 37921038
    856672 8pv5:LM (2.86) BS01 rna ? GO:0003723 ... G0S1R0 37921038
    856673 8pv5:LN (2.86) BS01 rna ? GO:0002181 ... G0RZ88 37921038
    856674 8pv5:LN (2.86) BS02 rna ? GO:0002181 ... G0RZ88 37921038
    856675 8pv5:LO (2.86) BS01 rna ? GO:0003729 ... G0SH61 37921038
    856676 8pv5:LP (2.86) BS01 rna ? GO:0002181 ... G0SGY1 37921038
    856677 8pv5:LP (2.86) BS02 rna ? GO:0002181 ... G0SGY1 37921038
    856678 8pv5:LQ (2.86) BS01 rna ? GO:0003723 ... G0S9B5 37921038
    856679 8pv5:LR (2.86) BS01 rna ? GO:0003735 ... G0S9T3 37921038
    856680 8pv5:LS (2.86) BS01 rna ? GO:0003735 ... G0SCE2 37921038
    856681 8pv5:LT (2.86) BS01 rna ? GO:0003735 ... G0S0Z3 37921038
    856682 8pv5:LU (2.86) BS01 rna ? GO:0002181 ... G0SDS8 37921038
    856683 8pv5:LV (2.86) BS01 rna ? GO:0003735 ... G0SI44 37921038
    856684 8pv5:LX (2.86) BS01 rna ? GO:0003735 ... G0S507 37921038
    856685 8pv5:LX (2.86) BS02 rna ? GO:0003735 ... G0S507 37921038
    856686 8pv5:LY (2.86) BS01 rna ? GO:0003723 ... G0RYN9 37921038
    856687 8pv5:LY (2.86) BS02 rna ? GO:0003723 ... G0RYN9 37921038
    856688 8pv5:LZ (2.86) BS01 rna ? GO:0003735 ... G0RZE9 37921038
    856689 8pv5:La (2.86) BS01 rna N/A GO:0003735 ... N/A 37921038
    856690 8pv5:Lc (2.86) BS01 rna ? GO:0003723 ... G0SEI0 37921038
    856691 8pv5:Ld (2.86) BS01 rna ? GO:0002181 ... G0SD68 37921038
    856692 8pv5:Le (2.86) BS01 rna ? GO:0003735 ... G0S6V4 37921038
    856693 8pv5:Lf (2.86) BS01 rna ? GO:0003735 ... G0SCL3 37921038
    856694 8pv5:Lg (2.86) BS01 rna ? GO:0003735 ... G0SFN0 37921038
    856695 8pv5:Lg (2.86) BS02 ZN ? GO:0003735 ... G0SFN0 37921038
    856696 8pv5:Lh (2.86) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856697 8pv5:Lh (2.86) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856698 8pv5:Li (2.86) BS01 rna ? GO:0003735 ... G0SBN1 37921038
    856699 8pv5:Lj (2.86) BS01 rna ? GO:0003723 ... G0S101 37921038
    856700 8pv5:Lj (2.86) BS02 rna ? GO:0003723 ... G0S101 37921038
    856701 8pv5:Lj (2.86) BS03 ZN ? GO:0003723 ... G0S101 37921038
    856702 8pv5:Lk (2.86) BS01 rna ? GO:0003735 ... G0SG89 37921038
    856703 8pv5:Ll (2.86) BS01 rna ? GO:0003735 ... Q2H9R2 37921038
    856704 8pv5:Ll (2.86) BS02 rna ? GO:0003735 ... Q2H9R2 37921038
    856705 8pv5:Lp (2.86) BS01 rna ? GO:0003735 ... G0S6B0 37921038
    856706 8pv5:Lp (2.86) BS02 ZN ? GO:0003735 ... G0S6B0 37921038
    856707 8pv5:Lq (2.86) BS01 rna ? GO:0003735 ... G0SHJ6 37921038
    856708 8pv6:CF (2.94) BS01 rna ? GO:0000027 ... G0S616 37921038
    856709 8pv6:CH (2.94) BS01 rna ? GO:0005525 ... G0S8F1 37921038
    856710 8pv6:CH (2.94) BS02 rna ? GO:0005525 ... G0S8F1 37921038
    856711 8pv6:CH (2.94) BS03 GTP ? GO:0005525 ... G0S8F1 37921038
    856712 8pv6:CH (2.94) BS04 MG ? GO:0005525 ... G0S8F1 37921038
    856713 8pv6:CJ (2.94) BS01 rna ? GO:0000463 ... G0SHX6 37921038
    856714 8pv6:CJ (2.94) BS02 rna ? GO:0000463 ... G0SHX6 37921038
    856715 8pv6:CK (2.94) BS01 rna ? GO:0005634 ... G0S081 37921038
    856716 8pv6:CL (2.94) BS01 rna ? GO:0005525 ... G0SEW3 37921038
    856717 8pv6:CL (2.94) BS02 rna ? GO:0005525 ... G0SEW3 37921038
    856718 8pv6:CM (2.94) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856719 8pv6:CM (2.94) BS02 rna ? GO:0000463 ... G0SFL0 37921038
    856720 8pv6:CN (2.94) BS01 rna ? GO:0000054 ... G0S683 37921038
    856721 8pv6:CO (2.94) BS01 rna ? GO:0030687 ... G0SHK0 37921038
    856722 8pv6:CQ (2.94) BS01 rna ? GO:0003735 ... G0S497 37921038
    856723 8pv6:CQ (2.94) BS02 ZN ? GO:0003735 ... G0S497 37921038
    856724 8pv6:CR (2.94) BS01 rna ? GO:0000055 ... G0S215 37921038
    856725 8pv6:CS (2.94) BS01 rna ? GO:0005634 ... P0CT45 37921038
    856726 8pv6:CU (2.94) BS01 rna ? GO:0005634 ... G0S1T5 37921038
    856727 8pv6:CW (2.94) BS01 rna ? GO:0005634 ... G0S5R0 37921038
    856728 8pv6:Cb (2.94) BS01 rna ? GO:0003676 ... G0SB32 37921038
    856729 8pv6:Cb (2.94) BS02 ZN ? GO:0003676 ... G0SB32 37921038
    856730 8pv6:Cd (2.94) BS01 rna ? GO:0005525 ... G0SBX1 37921038
    856731 8pv6:Cd (2.94) BS02 GTP ? GO:0005525 ... G0SBX1 37921038
    856732 8pv6:Cd (2.94) BS03 MG ? GO:0005525 ... G0SBX1 37921038
    856733 8pv6:Cd (2.94) BS04 MG ? GO:0005525 ... G0SBX1 37921038
    856734 8pv6:Ce (2.94) BS01 rna ? GO:0000027 ... G0S495 37921038
    856735 8pv6:Ce (2.94) BS02 rna ? GO:0000027 ... G0S495 37921038
    856736 8pv6:Ch (2.94) BS01 rna ? GO:0000027 ... G0SC29 37921038
    856737 8pv6:Cz (2.94) BS01 rna ? GO:0005634 ... G0SCP3 37921038
    856738 8pv6:Cz (2.94) BS02 rna ? GO:0005634 ... G0SCP3 37921038
    856739 8pv6:LA (2.94) BS01 rna ? GO:0002181 ... G0S4P8 37921038
    856740 8pv6:LB (2.94) BS01 rna ? GO:0003723 ... G0RXW1 37921038
    856741 8pv6:LC (2.94) BS01 rna ? GO:0003735 ... G0SFC3 37921038
    856742 8pv6:LC (2.94) BS02 rna ? GO:0003735 ... G0SFC3 37921038
    856743 8pv6:LD (2.94) BS01 rna ? GO:0000027 ... G0SEG2 37921038
    856744 8pv6:LD (2.94) BS02 rna ? GO:0000027 ... G0SEG2 37921038
    856745 8pv6:LE (2.94) BS01 rna ? GO:0000027 ... G0S0D6 37921038
    856746 8pv6:LF (2.94) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856747 8pv6:LF (2.94) BS02 rna ? GO:0000463 ... G0SFL0 37921038
    856748 8pv6:LG (2.94) BS01 rna ? GO:0003723 ... G0SAJ9 37921038
    856749 8pv6:LG (2.94) BS02 rna ? GO:0003723 ... G0SAJ9 37921038
    856750 8pv6:LG (2.94) BS03 rna ? GO:0003723 ... G0SAJ9 37921038
    856751 8pv6:LH (2.94) BS01 rna N/A GO:0003735 ... N/A 37921038
    856752 8pv6:LJ (2.94) BS01 rna ? GO:0003735 ... G0SHQ2 37921038
    856753 8pv6:LJ (2.94) BS02 rna ? GO:0003735 ... G0SHQ2 37921038
    856754 8pv6:LK (2.94) BS01 rna ? GO:0003735 ... G0SGH8 37921038
    856755 8pv6:LL (2.94) BS01 rna ? GO:0003723 ... G0S992 37921038
    856756 8pv6:LL (2.94) BS02 rna ? GO:0003723 ... G0S992 37921038
    856757 8pv6:LM (2.94) BS01 rna ? GO:0003723 ... G0S1R0 37921038
    856758 8pv6:LN (2.94) BS01 rna ? GO:0002181 ... G0RZ88 37921038
    856759 8pv6:LN (2.94) BS02 rna ? GO:0002181 ... G0RZ88 37921038
    856760 8pv6:LO (2.94) BS01 rna ? GO:0003729 ... G0SH61 37921038
    856761 8pv6:LP (2.94) BS01 rna ? GO:0002181 ... G0SGY1 37921038
    856762 8pv6:LP (2.94) BS02 rna ? GO:0002181 ... G0SGY1 37921038
    856763 8pv6:LQ (2.94) BS01 rna ? GO:0003723 ... G0S9B5 37921038
    856764 8pv6:LR (2.94) BS01 rna ? GO:0003735 ... G0S9T3 37921038
    856765 8pv6:LS (2.94) BS01 rna ? GO:0003735 ... G0SCE2 37921038
    856766 8pv6:LS (2.94) BS02 rna ? GO:0003735 ... G0SCE2 37921038
    856767 8pv6:LT (2.94) BS01 rna ? GO:0003735 ... G0S0Z3 37921038
    856768 8pv6:LT (2.94) BS02 rna ? GO:0003735 ... G0S0Z3 37921038
    856769 8pv6:LU (2.94) BS01 rna ? GO:0002181 ... G0SDS8 37921038
    856770 8pv6:LV (2.94) BS01 rna ? GO:0003735 ... G0SI44 37921038
    856771 8pv6:LX (2.94) BS01 rna ? GO:0003735 ... G0S507 37921038
    856772 8pv6:LX (2.94) BS02 rna ? GO:0003735 ... G0S507 37921038
    856773 8pv6:LY (2.94) BS01 rna ? GO:0003723 ... G0RYN9 37921038
    856774 8pv6:LY (2.94) BS02 rna ? GO:0003723 ... G0RYN9 37921038
    856775 8pv6:LZ (2.94) BS01 rna ? GO:0003735 ... G0RZE9 37921038
    856776 8pv6:La (2.94) BS01 rna N/A GO:0003735 ... N/A 37921038
    856777 8pv6:Lb (2.94) BS01 rna ? GO:0002181 ... Q2H9W4 37921038
    856778 8pv6:Lc (2.94) BS01 rna ? GO:0003723 ... G0SEI0 37921038
    856779 8pv6:Ld (2.94) BS01 rna ? GO:0002181 ... G0SD68 37921038
    856780 8pv6:Le (2.94) BS01 rna ? GO:0003735 ... G0S6V4 37921038
    856781 8pv6:Lf (2.94) BS01 rna ? GO:0003735 ... G0SCL3 37921038
    856782 8pv6:Lg (2.94) BS01 rna ? GO:0003735 ... G0SFN0 37921038
    856783 8pv6:Lg (2.94) BS02 ZN ? GO:0003735 ... G0SFN0 37921038
    856784 8pv6:Lh (2.94) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856785 8pv6:Lh (2.94) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856786 8pv6:Li (2.94) BS01 rna ? GO:0003735 ... G0SBN1 37921038
    856787 8pv6:Lj (2.94) BS01 rna ? GO:0003723 ... G0S101 37921038
    856788 8pv6:Lj (2.94) BS02 rna ? GO:0003723 ... G0S101 37921038
    856789 8pv6:Lj (2.94) BS03 ZN ? GO:0003723 ... G0S101 37921038
    856790 8pv6:Lk (2.94) BS01 rna ? GO:0003735 ... G0SG89 37921038
    856791 8pv6:Ll (2.94) BS01 rna ? GO:0003735 ... Q2H9R2 37921038
    856792 8pv6:Ll (2.94) BS02 rna ? GO:0003735 ... Q2H9R2 37921038
    856793 8pv6:Lp (2.94) BS01 rna ? GO:0003735 ... G0S6B0 37921038
    856794 8pv6:Lp (2.94) BS02 ZN ? GO:0003735 ... G0S6B0 37921038
    856795 8pv6:Lq (2.94) BS01 rna ? GO:0003735 ... G0SHJ6 37921038
    856796 8pv6:Lr (2.94) BS01 rna ? GO:0003723 ... G0S4Z9 37921038
    856797 8pv7:CB (2.12) BS01 rna ? N/A G0S7X0 37921038
    856798 8pv7:CF (2.12) BS01 rna ? GO:0000027 ... G0S616 37921038
    856799 8pv7:CH (2.12) BS01 rna ? GO:0005525 ... G0S8F1 37921038
    856800 8pv7:CH (2.12) BS02 rna ? GO:0005525 ... G0S8F1 37921038

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).