SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    856801 8pv7:CH (2.12) BS03 GTP ? GO:0005525 ... G0S8F1 37921038
    856802 8pv7:CH (2.12) BS04 MG ? GO:0005525 ... G0S8F1 37921038
    856803 8pv7:CI (2.12) BS01 rna ? GO:0003676 ... G0S1H0 37921038
    856804 8pv7:CJ (2.12) BS01 rna ? GO:0000463 ... G0SHX6 37921038
    856805 8pv7:CJ (2.12) BS02 rna ? GO:0000463 ... G0SHX6 37921038
    856806 8pv7:CK (2.12) BS01 rna ? GO:0005634 ... G0S081 37921038
    856807 8pv7:CL (2.12) BS01 rna ? GO:0005525 ... G0SEW3 37921038
    856808 8pv7:CM (2.12) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856809 8pv7:CM (2.12) BS02 rna ? GO:0000463 ... G0SFL0 37921038
    856810 8pv7:CN (2.12) BS01 rna ? GO:0000054 ... G0S683 37921038
    856811 8pv7:CO (2.12) BS01 rna ? GO:0030687 ... G0SHK0 37921038
    856812 8pv7:CQ (2.12) BS01 rna ? GO:0003735 ... G0S497 37921038
    856813 8pv7:CQ (2.12) BS02 ZN ? GO:0003735 ... G0S497 37921038
    856814 8pv7:Cb (2.12) BS01 rna ? GO:0003676 ... G0SB32 37921038
    856815 8pv7:Cb (2.12) BS02 ZN ? GO:0003676 ... G0SB32 37921038
    856816 8pv7:Cd (2.12) BS01 rna ? GO:0005525 ... G0SBX1 37921038
    856817 8pv7:Cd (2.12) BS02 GTP ? GO:0005525 ... G0SBX1 37921038
    856818 8pv7:Cd (2.12) BS03 MG ? GO:0005525 ... G0SBX1 37921038
    856819 8pv7:Cd (2.12) BS04 MG ? GO:0005525 ... G0SBX1 37921038
    856820 8pv7:Ce (2.12) BS01 rna ? GO:0000027 ... G0S495 37921038
    856821 8pv7:Ce (2.12) BS02 rna ? GO:0000027 ... G0S495 37921038
    856822 8pv7:Cf (2.12) BS01 rna ? GO:0000027 ... G0SF80 37921038
    856823 8pv7:Cf (2.12) BS02 rna ? GO:0000027 ... G0SF80 37921038
    856824 8pv7:Cg (2.12) BS01 rna ? GO:0005634 ... G0SCH6 37921038
    856825 8pv7:Cz (2.12) BS01 rna ? GO:0005634 ... G0SCP3 37921038
    856826 8pv7:Cz (2.12) BS02 rna ? GO:0005634 ... G0SCP3 37921038
    856827 8pv7:LA (2.12) BS01 rna ? GO:0002181 ... G0S4P8 37921038
    856828 8pv7:LB (2.12) BS01 rna ? GO:0003723 ... G0RXW1 37921038
    856829 8pv7:LC (2.12) BS01 rna ? GO:0003735 ... G0SFC3 37921038
    856830 8pv7:LC (2.12) BS02 rna ? GO:0003735 ... G0SFC3 37921038
    856831 8pv7:LD (2.12) BS01 rna ? GO:0000027 ... G0SEG2 37921038
    856832 8pv7:LD (2.12) BS02 rna ? GO:0000027 ... G0SEG2 37921038
    856833 8pv7:LE (2.12) BS01 rna ? GO:0000027 ... G0S0D6 37921038
    856834 8pv7:LF (2.12) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856835 8pv7:LG (2.12) BS01 rna ? GO:0003723 ... G0SAJ9 37921038
    856836 8pv7:LG (2.12) BS02 rna ? GO:0003723 ... G0SAJ9 37921038
    856837 8pv7:LG (2.12) BS03 rna ? GO:0003723 ... G0SAJ9 37921038
    856838 8pv7:LH (2.12) BS01 rna N/A GO:0003735 ... N/A 37921038
    856839 8pv7:LJ (2.12) BS01 rna ? GO:0003735 ... G0SHQ2 37921038
    856840 8pv7:LJ (2.12) BS02 rna ? GO:0003735 ... G0SHQ2 37921038
    856841 8pv7:LK (2.12) BS01 rna ? GO:0003735 ... G0SGH8 37921038
    856842 8pv7:LL (2.12) BS01 rna ? GO:0003723 ... G0S992 37921038
    856843 8pv7:LL (2.12) BS02 rna ? GO:0003723 ... G0S992 37921038
    856844 8pv7:LM (2.12) BS01 rna ? GO:0003723 ... G0S1R0 37921038
    856845 8pv7:LN (2.12) BS01 rna ? GO:0002181 ... G0RZ88 37921038
    856846 8pv7:LN (2.12) BS02 rna ? GO:0002181 ... G0RZ88 37921038
    856847 8pv7:LO (2.12) BS01 rna ? GO:0003729 ... G0SH61 37921038
    856848 8pv7:LP (2.12) BS01 rna ? GO:0002181 ... G0SGY1 37921038
    856849 8pv7:LP (2.12) BS02 rna ? GO:0002181 ... G0SGY1 37921038
    856850 8pv7:LQ (2.12) BS01 rna ? GO:0003723 ... G0S9B5 37921038
    856851 8pv7:LR (2.12) BS01 rna ? GO:0003735 ... G0S9T3 37921038
    856852 8pv7:LS (2.12) BS01 rna ? GO:0003735 ... G0SCE2 37921038
    856853 8pv7:LT (2.12) BS01 rna ? GO:0003735 ... G0S0Z3 37921038
    856854 8pv7:LU (2.12) BS01 rna ? GO:0002181 ... G0SDS8 37921038
    856855 8pv7:LV (2.12) BS01 rna ? GO:0003735 ... G0SI44 37921038
    856856 8pv7:LX (2.12) BS01 rna ? GO:0003735 ... G0S507 37921038
    856857 8pv7:LX (2.12) BS02 rna ? GO:0003735 ... G0S507 37921038
    856858 8pv7:LY (2.12) BS01 rna ? GO:0003723 ... G0RYN9 37921038
    856859 8pv7:LY (2.12) BS02 rna ? GO:0003723 ... G0RYN9 37921038
    856860 8pv7:LZ (2.12) BS01 rna ? GO:0003735 ... G0RZE9 37921038
    856861 8pv7:La (2.12) BS01 rna N/A GO:0003735 ... N/A 37921038
    856862 8pv7:Lc (2.12) BS01 rna ? GO:0003723 ... G0SEI0 37921038
    856863 8pv7:Ld (2.12) BS01 rna ? GO:0002181 ... G0SD68 37921038
    856864 8pv7:Le (2.12) BS01 rna ? GO:0003735 ... G0S6V4 37921038
    856865 8pv7:Lf (2.12) BS01 rna ? GO:0003735 ... G0SCL3 37921038
    856866 8pv7:Lg (2.12) BS01 rna ? GO:0003735 ... G0SFN0 37921038
    856867 8pv7:Lg (2.12) BS02 ZN ? GO:0003735 ... G0SFN0 37921038
    856868 8pv7:Lh (2.12) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856869 8pv7:Lh (2.12) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856870 8pv7:Li (2.12) BS01 rna ? GO:0003735 ... G0SBN1 37921038
    856871 8pv7:Lj (2.12) BS01 rna ? GO:0003723 ... G0S101 37921038
    856872 8pv7:Lj (2.12) BS02 rna ? GO:0003723 ... G0S101 37921038
    856873 8pv7:Lj (2.12) BS03 ZN ? GO:0003723 ... G0S101 37921038
    856874 8pv7:Lk (2.12) BS01 rna ? GO:0003735 ... G0SG89 37921038
    856875 8pv7:Ll (2.12) BS01 rna ? GO:0003735 ... Q2H9R2 37921038
    856876 8pv7:Ll (2.12) BS02 rna ? GO:0003735 ... Q2H9R2 37921038
    856877 8pv7:Lp (2.12) BS01 rna ? GO:0003735 ... G0S6B0 37921038
    856878 8pv7:Lp (2.12) BS02 ZN ? GO:0003735 ... G0S6B0 37921038
    856879 8pv7:Lq (2.12) BS01 rna ? GO:0003735 ... G0SHJ6 37921038
    856880 8pv8:CF (2.91) BS01 rna ? GO:0000027 ... G0S616 37921038
    856881 8pv8:CH (2.91) BS01 rna ? GO:0005525 ... G0S8F1 37921038
    856882 8pv8:CH (2.91) BS02 rna ? GO:0005525 ... G0S8F1 37921038
    856883 8pv8:CH (2.91) BS03 GTP ? GO:0005525 ... G0S8F1 37921038
    856884 8pv8:CH (2.91) BS04 MG ? GO:0005525 ... G0S8F1 37921038
    856885 8pv8:CK (2.91) BS01 rna ? GO:0005634 ... G0S081 37921038
    856886 8pv8:CL (2.91) BS01 rna ? GO:0005525 ... G0SEW3 37921038
    856887 8pv8:CL (2.91) BS02 rna ? GO:0005525 ... G0SEW3 37921038
    856888 8pv8:CN (2.91) BS01 rna ? GO:0000054 ... G0S683 37921038
    856889 8pv8:CO (2.91) BS01 rna ? GO:0030687 ... G0SHK0 37921038
    856890 8pv8:CQ (2.91) BS01 rna ? GO:0003735 ... G0S497 37921038
    856891 8pv8:CQ (2.91) BS02 ZN ? GO:0003735 ... G0S497 37921038
    856892 8pv8:CR (2.91) BS01 rna ? GO:0000055 ... G0S215 37921038
    856893 8pv8:CS (2.91) BS01 rna ? GO:0005634 ... P0CT45 37921038
    856894 8pv8:CU (2.91) BS01 rna ? GO:0005634 ... G0S1T5 37921038
    856895 8pv8:CW (2.91) BS01 rna ? GO:0005634 ... G0S5R0 37921038
    856896 8pv8:Cb (2.91) BS01 rna ? GO:0003676 ... G0SB32 37921038
    856897 8pv8:Cb (2.91) BS02 ZN ? GO:0003676 ... G0SB32 37921038
    856898 8pv8:Cd (2.91) BS01 rna ? GO:0005525 ... G0SBX1 37921038
    856899 8pv8:Cd (2.91) BS02 GTP ? GO:0005525 ... G0SBX1 37921038
    856900 8pv8:Cd (2.91) BS03 MG ? GO:0005525 ... G0SBX1 37921038
    856901 8pv8:Ch (2.91) BS01 rna ? GO:0000027 ... G0SC29 37921038
    856902 8pv8:Cz (2.91) BS01 rna ? GO:0005634 ... G0SCP3 37921038
    856903 8pv8:Cz (2.91) BS02 rna ? GO:0005634 ... G0SCP3 37921038
    856904 8pv8:LA (2.91) BS01 rna ? GO:0002181 ... G0S4P8 37921038
    856905 8pv8:LB (2.91) BS01 rna ? GO:0003723 ... G0RXW1 37921038
    856906 8pv8:LC (2.91) BS01 rna ? GO:0003735 ... G0SFC3 37921038
    856907 8pv8:LC (2.91) BS02 rna ? GO:0003735 ... G0SFC3 37921038
    856908 8pv8:LD (2.91) BS01 rna ? GO:0000027 ... G0SEG2 37921038
    856909 8pv8:LD (2.91) BS02 rna ? GO:0000027 ... G0SEG2 37921038
    856910 8pv8:LE (2.91) BS01 rna ? GO:0000027 ... G0S0D6 37921038
    856911 8pv8:LF (2.91) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    856912 8pv8:LF (2.91) BS02 rna ? GO:0000463 ... G0SFL0 37921038
    856913 8pv8:LG (2.91) BS01 rna ? GO:0003723 ... G0SAJ9 37921038
    856914 8pv8:LG (2.91) BS02 rna ? GO:0003723 ... G0SAJ9 37921038
    856915 8pv8:LH (2.91) BS01 rna N/A GO:0003735 ... G0S0E5 37921038
    856916 8pv8:LJ (2.91) BS01 rna ? GO:0003735 ... G0SHQ2 37921038
    856917 8pv8:LJ (2.91) BS02 rna ? GO:0003735 ... G0SHQ2 37921038
    856918 8pv8:LK (2.91) BS01 rna ? GO:0003735 ... G0SGH8 37921038
    856919 8pv8:LL (2.91) BS01 rna ? GO:0003723 ... G0S992 37921038
    856920 8pv8:LL (2.91) BS02 rna ? GO:0003723 ... G0S992 37921038
    856921 8pv8:LM (2.91) BS01 rna ? GO:0003723 ... G0S1R0 37921038
    856922 8pv8:LN (2.91) BS01 rna ? GO:0002181 ... G0RZ88 37921038
    856923 8pv8:LN (2.91) BS02 rna ? GO:0002181 ... G0RZ88 37921038
    856924 8pv8:LO (2.91) BS01 rna ? GO:0003729 ... G0SH61 37921038
    856925 8pv8:LP (2.91) BS01 rna ? GO:0002181 ... G0SGY1 37921038
    856926 8pv8:LP (2.91) BS02 rna ? GO:0002181 ... G0SGY1 37921038
    856927 8pv8:LQ (2.91) BS01 rna ? GO:0003723 ... G0S9B5 37921038
    856928 8pv8:LR (2.91) BS01 rna ? GO:0003735 ... G0S9T3 37921038
    856929 8pv8:LS (2.91) BS01 rna ? GO:0003735 ... G0SCE2 37921038
    856930 8pv8:LS (2.91) BS02 rna ? GO:0003735 ... G0SCE2 37921038
    856931 8pv8:LT (2.91) BS01 rna ? GO:0003735 ... G0S0Z3 37921038
    856932 8pv8:LT (2.91) BS02 rna ? GO:0003735 ... G0S0Z3 37921038
    856933 8pv8:LU (2.91) BS01 rna ? GO:0002181 ... G0SDS8 37921038
    856934 8pv8:LV (2.91) BS01 rna ? GO:0003735 ... G0SI44 37921038
    856935 8pv8:LX (2.91) BS01 rna ? GO:0003735 ... G0S507 37921038
    856936 8pv8:LX (2.91) BS02 rna ? GO:0003735 ... G0S507 37921038
    856937 8pv8:LY (2.91) BS01 rna ? GO:0003723 ... G0RYN9 37921038
    856938 8pv8:LY (2.91) BS02 rna ? GO:0003723 ... G0RYN9 37921038
    856939 8pv8:LZ (2.91) BS01 rna ? GO:0003735 ... G0RZE9 37921038
    856940 8pv8:La (2.91) BS01 rna N/A GO:0003735 ... G0SGT6 37921038
    856941 8pv8:Lb (2.91) BS01 rna ? GO:0002181 ... Q2H9W4 37921038
    856942 8pv8:Lc (2.91) BS01 rna ? GO:0003723 ... G0SEI0 37921038
    856943 8pv8:Ld (2.91) BS01 rna ? GO:0002181 ... G0SD68 37921038
    856944 8pv8:Le (2.91) BS01 rna ? GO:0003735 ... G0S6V4 37921038
    856945 8pv8:Lf (2.91) BS01 rna ? GO:0003735 ... G0SCL3 37921038
    856946 8pv8:Lg (2.91) BS01 rna ? GO:0003735 ... G0SFN0 37921038
    856947 8pv8:Lg (2.91) BS02 ZN ? GO:0003735 ... G0SFN0 37921038
    856948 8pv8:Lh (2.91) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856949 8pv8:Lh (2.91) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    856950 8pv8:Li (2.91) BS01 rna ? GO:0003735 ... G0SBN1 37921038
    856951 8pv8:Lj (2.91) BS01 rna ? GO:0003723 ... G0S101 37921038
    856952 8pv8:Lj (2.91) BS02 rna ? GO:0003723 ... G0S101 37921038
    856953 8pv8:Lj (2.91) BS03 ZN ? GO:0003723 ... G0S101 37921038
    856954 8pv8:Lk (2.91) BS01 rna N/A GO:0003735 ... G0SG89 37921038
    856955 8pv8:Ll (2.91) BS01 rna ? GO:0003735 ... Q2H9R2 37921038
    856956 8pv8:Ll (2.91) BS02 rna ? GO:0003735 ... Q2H9R2 37921038
    856957 8pv8:Lp (2.91) BS01 rna ? GO:0003735 ... G0S6B0 37921038
    856958 8pv8:Lp (2.91) BS02 ZN ? GO:0003735 ... G0S6B0 37921038
    856959 8pv8:Lq (2.91) BS01 rna ? GO:0003735 ... G0SHJ6 37921038
    856960 8pv8:Lt (2.91) BS01 rna ? GO:0003723 ... G0S4Z9 37921038
    856961 8pva:0 (4.5) BS01 rna ? GO:0000027 ... P0A7N9 38011573
    856962 8pva:1 (4.5) BS01 rna ? GO:0002181 ... P0A7P5 38011573
    856963 8pva:2 (4.5) BS01 rna ? GO:0002181 ... P0A7Q1 38011573
    856964 8pva:3 (4.5) BS01 rna ? GO:0002181 ... P0A7Q6 38011573
    856965 8pva:3 (4.5) BS02 ZN ? GO:0002181 ... P0A7Q6 38011573
    856966 8pva:4 (4.5) BS01 rna ? GO:0002181 ... P0A7M9 38011573
    856967 8pva:4 (4.5) BS02 ZN ? GO:0002181 ... P0A7M9 38011573
    856968 8pva:B (4.5) BS01 rna ? GO:0000028 ... P0A7V0 38011573
    856969 8pva:C (4.5) BS01 rna ? GO:0000028 ... P0A7V3 38011573
    856970 8pva:D (4.5) BS01 rna ? GO:0000028 ... P0A7V8 38011573
    856971 8pva:E (4.5) BS01 rna ? GO:0000028 ... P0A7W1 38011573
    856972 8pva:F (4.5) BS01 rna ? GO:0002181 ... P02358 38011573
    856973 8pva:G (4.5) BS01 rna ? GO:0000028 ... P02359 38011573
    856974 8pva:G (4.5) BS02 rna ? GO:0000028 ... P02359 38011573
    856975 8pva:H (4.5) BS01 rna ? GO:0000028 ... P0A7W7 38011573
    856976 8pva:I (4.5) BS01 rna ? GO:0000049 ... P0A7X3 38011573
    856977 8pva:I (4.5) BS02 rna ? GO:0000049 ... P0A7X3 38011573
    856978 8pva:J (4.5) BS01 rna ? GO:0000049 ... P0A7R5 38011573
    856979 8pva:K (4.5) BS01 rna ? GO:0002181 ... P0A7R9 38011573
    856980 8pva:L (4.5) BS01 rna ? GO:0000049 ... P0A7S3 38011573
    856981 8pva:M (4.5) BS01 rna ? GO:0000049 ... P0A7S9 38011573
    856982 8pva:M (4.5) BS02 rna ? GO:0000049 ... P0A7S9 38011573
    856983 8pva:N (4.5) BS01 rna ? GO:0000028 ... P0AG59 38011573
    856984 8pva:O (4.5) BS01 rna ? GO:0000028 ... P0ADZ4 38011573
    856985 8pva:O (4.5) BS02 rna ? GO:0000028 ... P0ADZ4 38011573
    856986 8pva:P (4.5) BS01 rna ? GO:0000028 ... P0A7T3 38011573
    856987 8pva:Q (4.5) BS01 rna ? GO:0000028 ... P0AG63 38011573
    856988 8pva:R (4.5) BS01 rna ? GO:0002181 ... P0A7T7 38011573
    856989 8pva:S (4.5) BS01 rna ? GO:0000028 ... P0A7U3 38011573
    856990 8pva:T (4.5) BS01 rna ? GO:0000028 ... P0A7U7 38011573
    856991 8pva:U (4.5) BS01 rna ? GO:0000028 ... P68679 38011573
    856992 8pva:c (4.5) BS01 rna ? GO:0000027 ... P60422 38011573
    856993 8pva:d (4.5) BS01 rna ? GO:0000027 ... P60438 38011573
    856994 8pva:e (4.5) BS01 rna ? GO:0001070 ... P60723 38011573
    856995 8pva:f (4.5) BS01 rna ? GO:0000027 ... P62399 38011573
    856996 8pva:f (4.5) BS02 rna ? GO:0000027 ... P62399 38011573
    856997 8pva:f (4.5) BS03 rna ? GO:0000027 ... P62399 38011573
    856998 8pva:g (4.5) BS01 rna ? GO:0000027 ... P0AG55 38011573
    856999 8pva:h (4.5) BS01 rna ? GO:0002181 ... P0A7R1 38011573
    857000 8pva:i (4.5) BS01 rna ? GO:0002181 ... P0AA10 38011573

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).