SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    857401 8pwy:C (1.8) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    857402 8pwy:D (1.8) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    857403 8pwy:E (1.8) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    857404 8pwy:F (1.8) BS01 HEM N/A GO:0004601 ... A0A7U9HFU5 N/A
    857405 8px0:A (1.8) BS01 0U 4.6.1.18 GO:0003676 ... P61823 37828292
    857406 8px2:A (1.622) BS01 NUB ? N/A P25440 37967462
    857407 8px3:A (3.0) BS01 peptide N/A GO:0003677 ... P0C573 N/A
    857408 8px3:B (3.0) BS01 peptide N/A GO:0003677 ... P0C573 N/A
    857409 8px3:C (3.0) BS01 peptide N/A GO:0003677 ... P0C573 N/A
    857410 8px3:D (3.0) BS01 peptide N/A GO:0003677 ... P0C573 N/A
    857411 8px6:A (2.5) BS01 peptide N/A GO:0003677 ... P0C573 N/A
    857412 8px6:C (2.5) BS01 peptide N/A GO:0003677 ... P0C573 N/A
    857413 8px6:D (2.5) BS01 peptide N/A GO:0003677 ... P0C573 N/A
    857414 8px8:A (1.603) BS01 I0U ? N/A P25440 37967462
    857415 8px9:A (2.8) BS01 MG ? GO:0005524 ... Q9X2W0 37828292
    857416 8px9:A (2.8) BS02 ANP ? GO:0005524 ... Q9X2W0 37828292
    857417 8px9:A (2.8) BS03 ANP ? GO:0005524 ... Q9X2W0 37828292
    857418 8px9:B (2.8) BS01 ANP ? GO:0005524 ... Q9X2W0 37828292
    857419 8px9:B (2.8) BS02 ANP ? GO:0005524 ... Q9X2W0 37828292
    857420 8px9:B (2.8) BS03 MG ? GO:0005524 ... Q9X2W0 37828292
    857421 8pxa:AAA (1.3) BS01 I0Z ? N/A O60885 37967462
    857422 8pxc:A (1.973) BS01 CA ? N/A F2QF16 37828292
    857423 8pxc:A (1.973) BS02 CA ? N/A F2QF16 37828292
    857424 8pxi:A (1.2) BS01 D8V N/A GO:0004190 ... P11838 N/A
    857425 8pxk:A (3.77) BS01 FAD ? GO:0000166 ... Q52437 37828292
    857426 8pxl:A (1.6) BS01 FAD ? GO:0000166 ... Q52437 37828292
    857427 8pxm:A (2.378) BS01 ZTY ? N/A O60885 37736196
    857428 8pxm:B (2.378) BS01 ZTY ? N/A O60885 37736196
    857429 8pxn:A (1.952) BS01 ZTT ? N/A O60885 37736196
    857430 8pxn:B (1.952) BS01 ZTT ? N/A O60885 37736196
    857431 8pxn:C (1.952) BS01 ZTT ? N/A O60885 37736196
    857432 8pxn:D (1.952) BS01 ZTT ? N/A O60885 37736196
    857433 8pxo:A (3.0) BS01 I3T N/A GO:0005515 ... Q9UNQ0 39445888
    857434 8pxo:A (3.0) BS02 I3T N/A GO:0005515 ... Q9UNQ0 39445888
    857435 8pxo:A (3.0) BS03 CLR N/A GO:0005515 ... Q9UNQ0 39445888
    857436 8pxo:B (3.0) BS01 CLR N/A GO:0005515 ... Q9UNQ0 39445888
    857437 8pxo:B (3.0) BS02 CLR N/A GO:0005515 ... Q9UNQ0 39445888
    857438 8pxo:B (3.0) BS03 I3T N/A GO:0005515 ... Q9UNQ0 39445888
    857439 8pxo:B (3.0) BS04 I3T N/A GO:0005515 ... Q9UNQ0 39445888
    857440 8pxp:A (2.01) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    857441 8pxp:B (2.01) BS01 HEM N/A GO:0004601 ... A0A7U9DT46 N/A
    857442 8pxq:A (1.7) BS01 HEM N/A N/A A0A7U9DT46 N/A
    857443 8pxq:B (1.7) BS01 HEM N/A N/A A0A7U9DT46 N/A
    857444 8pxv:B (2.5) BS01 GAL 3.2.1.52 GO:0004553 ... B2UN02 38684911
    857445 8pxv:C (2.5) BS01 GAL 3.2.1.52 GO:0004553 ... B2UN02 38684911
    857446 8pxx:A (-1.00) BS01 peptide ? GO:0045292 ... O75400 38719828
    857447 8pxy:A (2.15) BS01 peptide N/A GO:0005886 ... I6Y9J2 39294212
    857448 8pxz:A (1.98) BS01 I1V N/A GO:0005886 ... I6Y9J2 39294212
    857449 8pxz:A (1.98) BS02 I36 N/A GO:0005886 ... I6Y9J2 39294212
    857450 8py2:A (3.32) BS01 ZN N/A N/A P46736 N/A
    857451 8py2:C (3.32) BS01 ZN N/A N/A P46736 N/A
    857452 8py2:C (3.32) BS02 X8C N/A N/A P46736 N/A
    857453 8py2:D (3.32) BS01 X8C N/A N/A Q15018 N/A
    857454 8py2:F (3.32) BS01 X8C N/A N/A Q9NXR7 N/A
    857455 8py2:G (3.32) BS01 ZN N/A N/A P46736 N/A
    857456 8py2:H (3.32) BS01 X8C N/A N/A Q15018 N/A
    857457 8py2:I (3.32) BS01 X8C N/A N/A P46736 N/A
    857458 8py2:I (3.32) BS02 ZN N/A N/A P46736 N/A
    857459 8py2:K (3.32) BS01 X8C N/A N/A Q9NXR7 N/A
    857460 8py3:A (1.65) BS01 ZN N/A GO:0017136 ... Q8IXJ6 38847803
    857461 8py3:A (1.65) BS02 I1R N/A GO:0017136 ... Q8IXJ6 38847803
    857462 8py4:A (3.0) BS01 CLR N/A GO:0005515 ... Q9UNQ0 39445888
    857463 8py4:A (3.0) BS02 I3O N/A GO:0005515 ... Q9UNQ0 39445888
    857464 8py4:B (3.0) BS01 CLR N/A GO:0005515 ... Q9UNQ0 39445888
    857465 8py4:B (3.0) BS02 CLR N/A GO:0005515 ... Q9UNQ0 39445888
    857466 8py4:B (3.0) BS03 I3O N/A GO:0005515 ... Q9UNQ0 39445888
    857467 8py4:B (3.0) BS04 I3O N/A GO:0005515 ... Q9UNQ0 39445888
    857468 8py5:A (1.85) BS01 ACV N/A GO:0005506 ... P05326 N/A
    857469 8py5:A (1.85) BS02 FE N/A GO:0005506 ... P05326 N/A
    857470 8py6:A (1.52) BS01 FE N/A GO:0005506 ... P05326 N/A
    857471 8py6:A (1.52) BS02 ACV N/A GO:0005506 ... P05326 N/A
    857472 8py7:A (1.49) BS01 ACV N/A GO:0005506 ... P05326 N/A
    857473 8py7:A (1.49) BS02 OXY N/A GO:0005506 ... P05326 N/A
    857474 8py7:A (1.49) BS03 FE N/A GO:0005506 ... P05326 N/A
    857475 8py8:A (1.46) BS01 IO0 N/A GO:0005506 ... P05326 N/A
    857476 8py8:A (1.46) BS02 ACV N/A GO:0005506 ... P05326 N/A
    857477 8py8:A (1.46) BS03 OXY N/A GO:0005506 ... P05326 N/A
    857478 8py8:A (1.46) BS04 FE N/A GO:0005506 ... P05326 N/A
    857479 8py9:A (1.5) BS01 ACV N/A GO:0005506 ... P05326 N/A
    857480 8py9:A (1.5) BS02 OXY N/A GO:0005506 ... P05326 N/A
    857481 8py9:A (1.5) BS03 FE N/A GO:0005506 ... P05326 N/A
    857482 8py9:A (1.5) BS04 IO0 N/A GO:0005506 ... P05326 N/A
    857483 8pya:A (1.5) BS01 ACV N/A GO:0005506 ... P05326 N/A
    857484 8pya:A (1.5) BS02 OXY N/A GO:0005506 ... P05326 N/A
    857485 8pya:A (1.5) BS03 FE N/A GO:0005506 ... P05326 N/A
    857486 8pya:A (1.5) BS04 IO0 N/A GO:0005506 ... P05326 N/A
    857487 8pyh:A (2.2) BS01 ECH ? GO:0009579 ... K9VSN3 37939760
    857488 8pyh:B (2.2) BS01 ECH ? GO:0009579 ... K9VSN3 37939760
    857489 8pyi:AAA (3.06) BS01 IER 2.7.10.1 GO:0004672 ... P08069 N/A
    857490 8pyi:BBB (3.06) BS01 IER 2.7.10.1 GO:0004672 ... P08069 N/A
    857491 8pyi:CCC (3.06) BS01 IER 2.7.10.1 GO:0004672 ... P08069 N/A
    857492 8pyi:DDD (3.06) BS01 IER 2.7.10.1 GO:0004672 ... P08069 N/A
    857493 8pyi:EEE (3.06) BS01 IER 2.7.10.1 GO:0004672 ... P08069 N/A
    857494 8pyi:FFF (3.06) BS01 IER 2.7.10.1 GO:0004672 ... P08069 N/A
    857495 8pyi:GGG (3.06) BS01 IER 2.7.10.1 GO:0004672 ... P08069 N/A
    857496 8pyi:HHH (3.06) BS01 IER 2.7.10.1 GO:0004672 ... P08069 N/A
    857497 8pyj:AAA (2.702) BS01 IEA 2.7.10.1 GO:0004672 ... P08069 N/A
    857498 8pyk:AAA (2.23) BS01 IC2 2.7.10.1 GO:0004672 ... P08069 N/A
    857499 8pyl:AAA (2.93) BS01 IE0 2.7.10.1 GO:0004672 ... P08069 N/A
    857500 8pym:AAA (2.652) BS01 IED 2.7.10.1 GO:0004672 ... P08069 N/A
    857501 8pyn:AAA (1.71) BS01 ICV 2.7.10.1 GO:0004672 ... P08069 N/A
    857502 8pyv:A (1.77) BS01 48T 1.11.1.-
    2.5.1.18
    5.3.99.3
    GO:0001516 ... O14684 37828292
    857503 8pyw:A (1.553) BS01 IF9 2.7.13.3
    2.7.4.6
    GO:0000155 ... P22392 38096103
    857504 8pyw:B (1.553) BS01 IF9 2.7.13.3
    2.7.4.6
    GO:0000155 ... P22392 38096103
    857505 8pyw:C (1.553) BS01 IF9 2.7.13.3
    2.7.4.6
    GO:0000155 ... P22392 38096103
    857506 8pyw:D (1.553) BS01 IF9 2.7.13.3
    2.7.4.6
    GO:0000155 ... P22392 38096103
    857507 8pyw:E (1.553) BS01 IF9 2.7.13.3
    2.7.4.6
    GO:0000155 ... P22392 38096103
    857508 8pyw:F (1.553) BS01 IF9 2.7.13.3
    2.7.4.6
    GO:0000155 ... P22392 38096103
    857509 8pyx:A (2.02) BS01 ADN ? GO:0016877 ... A0A1M5ABR5 38269041
    857510 8pyx:B (2.02) BS01 ADN ? GO:0016877 ... A0A1M5ABR5 38269041
    857511 8pyz:C (2.7) BS01 C8E ? GO:0006811 ... D6QLY1 37828292
    857512 8pyz:E (2.7) BS01 C8E ? GO:0006811 ... D6QLY1 37828292
    857513 8pyz:F (2.7) BS01 C8E ? GO:0006811 ... D6QLY1 37828292
    857514 8pyz:F (2.7) BS02 C8E ? GO:0006811 ... D6QLY1 37828292
    857515 8pz0:A (1.8) BS01 BCT 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857516 8pz4:A (1.77) BS01 CA ? GO:0009279 ... P18895 37828292
    857517 8pz4:A (1.77) BS02 CA ? GO:0009279 ... P18895 37828292
    857518 8pz4:A (1.77) BS03 78M ? GO:0009279 ... P18895 37828292
    857519 8pz4:A (1.77) BS04 78M ? GO:0009279 ... P18895 37828292
    857520 8pz4:A (1.77) BS05 78N ? GO:0009279 ... P18895 37828292
    857521 8pz4:A (1.77) BS06 78N ? GO:0009279 ... P18895 37828292
    857522 8pz4:A (1.77) BS07 78N ? GO:0009279 ... P18895 37828292
    857523 8pz5:A (3.2) BS01 FMN ? GO:0000166 ... B8HTZ1 37828292
    857524 8pz5:A (3.2) BS02 FMN ? GO:0000166 ... B8HTZ1 37828292
    857525 8pz5:B (3.2) BS01 FMN ? GO:0000166 ... B8HTZ1 37828292
    857526 8pz5:B (3.2) BS02 FMN ? GO:0000166 ... B8HTZ1 37828292
    857527 8pz6:A (2.9) BS01 peptide ? GO:0003677 ... Q9PTN2 38615411
    857528 8pz6:A (2.9) BS02 IG5 ? GO:0003677 ... Q9PTN2 38615411
    857529 8pz7:A (2.93) BS01 peptide ? GO:0003677 ... Q9PTN2 38615411
    857530 8pz7:A (2.93) BS02 IG0 ? GO:0003677 ... Q9PTN2 38615411
    857531 8pz8:A (2.64) BS01 peptide ? GO:0003677 ... Q9PTN2 38615411
    857532 8pz8:A (2.64) BS02 IFU ? GO:0003677 ... Q9PTN2 38615411
    857533 8pz9:A (2.74) BS01 peptide ? GO:0003677 ... Q9PTN2 38615411
    857534 8pz9:A (2.74) BS02 IFK ? GO:0003677 ... Q9PTN2 38615411
    857535 8pzb:A (2.73) BS01 peptide ? GO:0003677 ... Q9PTN2 38615411
    857536 8pzb:A (2.73) BS02 I72 ? GO:0003677 ... Q9PTN2 38615411
    857537 8pzh:A (2.02) BS01 MN ? N/A F9UT68 38224946
    857538 8pzk:A (1.8) BS01 ECH ? GO:0009579 ... K9XH36 37939760
    857539 8pzk:A (1.8) BS02 AZI ? GO:0009579 ... K9XH36 37939760
    857540 8pzk:A (1.8) BS03 AZI ? GO:0009579 ... K9XH36 37939760
    857541 8pzk:A (1.8) BS04 AZI ? GO:0009579 ... K9XH36 37939760
    857542 8pzm:A (1.7) BS01 BES 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857543 8pzm:A (1.7) BS02 BCT 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857544 8pzm:A (1.7) BS03 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857545 8pzm:A (1.7) BS04 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857546 8pzp:A (8.7) BS01 rna ? GO:0003723 ... A0A2Z5UJ33 38100595
    857547 8pzq:A (5.3) BS01 rna ? GO:0003723 ... A0A2Z5UJ33 38100595
    857548 8pzq:A (5.3) BS02 rna ? GO:0003723 ... A0A2Z5UJ33 38100595
    857549 8pzq:B (5.3) BS01 rna ? GO:0003723 ... A0A2Z5UJ33 38100595
    857550 8pzq:C (5.3) BS01 rna ? GO:0003723 ... A0A2Z5UJ33 38100595
    857551 8pzu:A (3.5) BS01 peptide N/A GO:0005515 ... P0A940 39218969
    857552 8pzu:B (3.5) BS01 MG N/A GO:0005515 ... P77774 39218969
    857553 8pzv:A (2.9) BS01 peptide N/A GO:0005515 ... P0A940 39218969
    857554 8pzv:B (2.9) BS01 MG N/A GO:0005515 ... P77774 39218969
    857555 8pzy:A (1.97) BS01 BCT 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857556 8pzy:A (1.97) BS02 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857557 8pzy:A (1.97) BS03 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857558 8pzy:B (1.97) BS01 BCT 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857559 8pzy:B (1.97) BS02 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857560 8pzy:B (1.97) BS03 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857561 8pzy:C (1.97) BS01 BCT 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857562 8pzy:C (1.97) BS02 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857563 8pzy:C (1.97) BS03 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857564 8pzy:D (1.97) BS01 BCT 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857565 8pzy:D (1.97) BS02 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857566 8pzy:D (1.97) BS03 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857567 8pzy:E (1.97) BS01 BCT 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857568 8pzy:E (1.97) BS02 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857569 8pzy:E (1.97) BS03 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857570 8pzy:F (1.97) BS01 BCT 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857571 8pzy:F (1.97) BS02 P03 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857572 8pzy:F (1.97) BS03 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857573 8pzy:F (1.97) BS04 MN 3.4.11.1
    3.4.11.10
    GO:0004177 ... Q02RY8 37924287
    857574 8q01:S (3.58) BS01 ZN N/A GO:0046872 ... A1YTN7 N/A
    857575 8q03:A (1.48) BS01 BUA N/A GO:0016787 ... N/A N/A
    857576 8q03:B (1.48) BS01 BUA N/A GO:0016787 ... N/A N/A
    857577 8q03:C (1.48) BS01 BUA N/A GO:0016787 ... N/A N/A
    857578 8q05:A (2.77) BS01 peptide N/A GO:0000287 ... W8SUA8 39384944
    857579 8q0a:B (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... P42026 38870289
    857580 8q0a:D (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... P17694 38870289
    857581 8q0a:E (3.1) BS01 FES 7.1.1.2 GO:0003954 ... P04394 38870289
    857582 8q0a:F (3.1) BS01 FMN 7.1.1.2 GO:0005739 ... P25708 38870289
    857583 8q0a:F (3.1) BS02 SF4 7.1.1.2 GO:0005739 ... P25708 38870289
    857584 8q0a:G (3.1) BS01 SF4 7.1.1.2 GO:0005739 ... P15690 38870289
    857585 8q0a:G (3.1) BS02 SF4 7.1.1.2 GO:0005739 ... P15690 38870289
    857586 8q0a:G (3.1) BS03 FES 7.1.1.2 GO:0005739 ... P15690 38870289
    857587 8q0a:I (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... P42028 38870289
    857588 8q0a:I (3.1) BS02 SF4 7.1.1.2 GO:0003954 ... P42028 38870289
    857589 8q0a:M (3.1) BS01 ZN 7.1.1.2 GO:0003954 ... P03910 38870289
    857590 8q0a:O (3.1) BS01 DGT ? GO:0005737 ... P34942 38870289
    857591 8q0a:P (3.1) BS01 NDP ? GO:0003954 ... P34943 38870289
    857592 8q0a:R (3.1) BS01 ZN ? GO:0005739 ... P23934 38870289
    857593 8q0a:T (3.1) BS01 EHZ ? GO:0000035 ... P52505 38870289
    857594 8q0a:U (3.1) BS01 EHZ ? GO:0000035 ... P52505 38870289
    857595 8q0a:W (3.1) BS01 EHZ ? GO:0005739 ... Q02366 38870289
    857596 8q0a:n (3.1) BS01 EHZ ? GO:0005739 ... Q02369 38870289
    857597 8q0c:A (1.3) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 38358125
    857598 8q0f:B (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... P42026 38870289
    857599 8q0f:D (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... P17694 38870289
    857600 8q0f:E (3.1) BS01 FES 7.1.1.2 GO:0003954 ... P04394 38870289

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).