SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    858401 8q49:O (2.6) BS01 DGT ? GO:0005737 ... P34942 38870289
    858402 8q49:P (2.6) BS01 FVH ? GO:0003954 ... P34943 38870289
    858403 8q49:R (2.6) BS01 ZN ? GO:0005739 ... P23934 38870289
    858404 8q49:U (2.6) BS01 EHZ ? GO:0000035 ... P52505 38870289
    858405 8q49:W (2.6) BS01 EHZ ? GO:0005739 ... Q02366 38870289
    858406 8q49:n (2.6) BS01 EHZ ? GO:0005739 ... Q02369 38870289
    858407 8q4a:B (2.6) BS01 SF4 7.1.1.2 GO:0003954 ... P42026 38870289
    858408 8q4a:B (2.6) BS02 U10 7.1.1.2 GO:0003954 ... P42026 38870289
    858409 8q4a:D (2.6) BS01 SF4 7.1.1.2 GO:0003954 ... P17694 38870289
    858410 8q4a:E (2.6) BS01 FES 7.1.1.2 GO:0003954 ... P04394 38870289
    858411 8q4a:F (2.6) BS01 SF4 7.1.1.2 GO:0005739 ... P25708 38870289
    858412 8q4a:F (2.6) BS02 FMN 7.1.1.2 GO:0005739 ... P25708 38870289
    858413 8q4a:G (2.6) BS01 SF4 7.1.1.2 GO:0005739 ... P15690 38870289
    858414 8q4a:G (2.6) BS02 SF4 7.1.1.2 GO:0005739 ... P15690 38870289
    858415 8q4a:G (2.6) BS03 FES 7.1.1.2 GO:0005739 ... P15690 38870289
    858416 8q4a:H (2.6) BS01 U10 7.1.1.2 GO:0003954 ... P03887 38870289
    858417 8q4a:I (2.6) BS01 SF4 7.1.1.2 GO:0003954 ... P42028 38870289
    858418 8q4a:I (2.6) BS02 SF4 7.1.1.2 GO:0003954 ... P42028 38870289
    858419 8q4a:M (2.6) BS01 ZN 7.1.1.2 GO:0003954 ... P03910 38870289
    858420 8q4a:O (2.6) BS01 DGT ? GO:0005737 ... P34942 38870289
    858421 8q4a:P (2.6) BS01 NDP ? GO:0003954 ... P34943 38870289
    858422 8q4a:R (2.6) BS01 ZN ? GO:0005739 ... P23934 38870289
    858423 8q4a:W (2.6) BS01 EHZ ? GO:0005739 ... Q02366 38870289
    858424 8q4a:n (2.6) BS01 EHZ ? GO:0005739 ... Q02369 38870289
    858425 8q4b:A (1.28) BS01 JCI N/A GO:0004190 ... P11838 N/A
    858426 8q4d:A (3.62) BS01 dna N/A GO:0003676 ... Q45618 38926614
    858427 8q4d:A (3.62) BS02 dna N/A GO:0003676 ... Q45618 38926614
    858428 8q4d:A (3.62) BS03 dna N/A GO:0003676 ... Q45618 38926614
    858429 8q4d:A (3.62) BS04 dna N/A GO:0003676 ... Q45618 38926614
    858430 8q4d:A (3.62) BS05 dna N/A GO:0003676 ... Q45618 38926614
    858431 8q4d:A (3.62) BS06 MG N/A GO:0003676 ... Q45618 38926614
    858432 8q4d:B (3.62) BS01 dna N/A GO:0003676 ... Q45618 38926614
    858433 8q4d:B (3.62) BS02 dna N/A GO:0003676 ... Q45618 38926614
    858434 8q4d:B (3.62) BS03 dna N/A GO:0003676 ... Q45618 38926614
    858435 8q4d:B (3.62) BS04 dna N/A GO:0003676 ... Q45618 38926614
    858436 8q4d:B (3.62) BS05 dna N/A GO:0003676 ... Q45618 38926614
    858437 8q4d:B (3.62) BS06 MG N/A GO:0003676 ... Q45618 38926614
    858438 8q4d:C (3.62) BS01 dna N/A GO:0003676 ... Q45618 38926614
    858439 8q4d:C (3.62) BS02 dna N/A GO:0003676 ... Q45618 38926614
    858440 8q4d:D (3.62) BS01 dna N/A GO:0003676 ... Q45618 38926614
    858441 8q4d:D (3.62) BS02 dna N/A GO:0003676 ... Q45618 38926614
    858442 8q4d:E (3.62) BS01 ADP N/A GO:0005524 ... Q45619 38926614
    858443 8q4d:F (3.62) BS01 MG N/A GO:0005524 ... Q45619 38926614
    858444 8q4d:F (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858445 8q4d:G (3.62) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    858446 8q4d:H (3.62) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    858447 8q4d:I (3.62) BS01 dna N/A GO:0005524 ... Q45619 38926614
    858448 8q4d:I (3.62) BS02 MG N/A GO:0005524 ... Q45619 38926614
    858449 8q4d:I (3.62) BS03 ATP N/A GO:0005524 ... Q45619 38926614
    858450 8q4d:J (3.62) BS01 MG N/A GO:0005524 ... Q45619 38926614
    858451 8q4d:J (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858452 8q4d:K (3.62) BS01 dna N/A GO:0005524 ... Q45619 38926614
    858453 8q4d:K (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858454 8q4d:L (3.62) BS01 dna N/A GO:0005524 ... Q45619 38926614
    858455 8q4d:L (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858456 8q4d:M (3.62) BS01 MG N/A GO:0005524 ... Q45619 38926614
    858457 8q4d:M (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858458 8q4d:N (3.62) BS01 dna N/A GO:0005524 ... Q45619 38926614
    858459 8q4d:N (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858460 8q4d:O (3.62) BS01 ADP N/A GO:0005524 ... Q45619 38926614
    858461 8q4d:P (3.62) BS01 MG N/A GO:0005524 ... Q45619 38926614
    858462 8q4d:P (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858463 8q4d:Q (3.62) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    858464 8q4d:R (3.62) BS01 ATP N/A GO:0005524 ... Q45619 38926614
    858465 8q4d:S (3.62) BS01 dna N/A GO:0005524 ... Q45619 38926614
    858466 8q4d:S (3.62) BS02 MG N/A GO:0005524 ... Q45619 38926614
    858467 8q4d:S (3.62) BS03 ATP N/A GO:0005524 ... Q45619 38926614
    858468 8q4d:T (3.62) BS01 MG N/A GO:0005524 ... Q45619 38926614
    858469 8q4d:T (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858470 8q4d:U (3.62) BS01 dna N/A GO:0005524 ... Q45619 38926614
    858471 8q4d:U (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858472 8q4d:V (3.62) BS01 dna N/A GO:0005524 ... Q45619 38926614
    858473 8q4d:V (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858474 8q4d:W (3.62) BS01 MG N/A GO:0005524 ... Q45619 38926614
    858475 8q4d:W (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858476 8q4d:X (3.62) BS01 dna N/A GO:0005524 ... Q45619 38926614
    858477 8q4d:X (3.62) BS02 ATP N/A GO:0005524 ... Q45619 38926614
    858478 8q4f:0 (3.1) BS01 rna N/A GO:0000027 ... P0A7N9 N/A
    858479 8q4f:1 (3.1) BS01 rna N/A GO:0002181 ... P0A7P5 N/A
    858480 8q4f:2 (3.1) BS01 rna N/A GO:0002181 ... P0A7Q1 N/A
    858481 8q4f:3 (3.1) BS01 rna N/A GO:0002181 ... P0A7Q6 N/A
    858482 8q4f:4 (3.1) BS01 rna N/A GO:0002181 ... P0A7M9 N/A
    858483 8q4f:B (3.1) BS01 rna N/A GO:0000028 ... P0A7V0 N/A
    858484 8q4f:C (3.1) BS01 rna N/A GO:0000028 ... P0A7V3 N/A
    858485 8q4f:D (3.1) BS01 rna N/A GO:0000028 ... P0A7V8 N/A
    858486 8q4f:E (3.1) BS01 rna N/A GO:0000028 ... P0A7W1 N/A
    858487 8q4f:F (3.1) BS01 rna N/A GO:0002181 ... P02358 N/A
    858488 8q4f:G (3.1) BS01 rna N/A GO:0000028 ... P02359 N/A
    858489 8q4f:H (3.1) BS01 rna N/A GO:0000028 ... P0A7W7 N/A
    858490 8q4f:I (3.1) BS01 rna N/A GO:0000049 ... P0A7X3 N/A
    858491 8q4f:I (3.1) BS02 rna N/A GO:0000049 ... P0A7X3 N/A
    858492 8q4f:J (3.1) BS01 rna N/A GO:0000049 ... P0A7R5 N/A
    858493 8q4f:K (3.1) BS01 rna N/A GO:0002181 ... P0A7R9 N/A
    858494 8q4f:L (3.1) BS01 rna N/A GO:0000049 ... P0A7S3 N/A
    858495 8q4f:M (3.1) BS01 rna N/A GO:0000049 ... P0A7S9 N/A
    858496 8q4f:M (3.1) BS02 rna N/A GO:0000049 ... P0A7S9 N/A
    858497 8q4f:N (3.1) BS01 rna N/A GO:0000028 ... P0AG59 N/A
    858498 8q4f:O (3.1) BS01 rna N/A GO:0000028 ... P0ADZ4 N/A
    858499 8q4f:O (3.1) BS02 rna N/A GO:0000028 ... P0ADZ4 N/A
    858500 8q4f:P (3.1) BS01 rna N/A GO:0000028 ... P0A7T3 N/A
    858501 8q4f:Q (3.1) BS01 rna N/A GO:0000028 ... P0AG63 N/A
    858502 8q4f:R (3.1) BS01 rna N/A GO:0002181 ... P0A7T7 N/A
    858503 8q4f:S (3.1) BS01 rna N/A GO:0000028 ... P0A7U3 N/A
    858504 8q4f:T (3.1) BS01 rna N/A GO:0000028 ... P0A7U7 N/A
    858505 8q4f:U (3.1) BS01 rna N/A GO:0000028 ... P68679 N/A
    858506 8q4f:c (3.1) BS01 rna N/A GO:0000027 ... P60422 N/A
    858507 8q4f:d (3.1) BS01 rna N/A GO:0000027 ... P60438 N/A
    858508 8q4f:e (3.1) BS01 rna N/A GO:0001070 ... P60723 N/A
    858509 8q4f:f (3.1) BS01 rna N/A GO:0000027 ... P62399 N/A
    858510 8q4f:f (3.1) BS02 rna N/A GO:0000027 ... P62399 N/A
    858511 8q4f:f (3.1) BS03 rna N/A GO:0000027 ... P62399 N/A
    858512 8q4f:g (3.1) BS01 rna N/A GO:0000027 ... P0AG55 N/A
    858513 8q4f:i (3.1) BS01 rna N/A GO:0002181 ... P0AA10 N/A
    858514 8q4f:j (3.1) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    858515 8q4f:j (3.1) BS02 rna N/A GO:0002181 ... P0ADY3 N/A
    858516 8q4f:k (3.1) BS01 rna N/A GO:0002181 ... P02413 N/A
    858517 8q4f:l (3.1) BS01 rna N/A GO:0000027 ... P0ADY7 N/A
    858518 8q4f:l (3.1) BS02 rna N/A GO:0000027 ... P0ADY7 N/A
    858519 8q4f:m (3.1) BS01 rna N/A GO:0000027 ... P0AG44 N/A
    858520 8q4f:n (3.1) BS01 rna N/A GO:0002181 ... P0C018 N/A
    858521 8q4f:n (3.1) BS02 rna N/A GO:0002181 ... P0C018 N/A
    858522 8q4f:o (3.1) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    858523 8q4f:o (3.1) BS02 rna N/A GO:0000027 ... P0A7K6 N/A
    858524 8q4f:p (3.1) BS01 rna N/A GO:0000027 ... P0A7L3 N/A
    858525 8q4f:q (3.1) BS01 rna N/A GO:0002181 ... P0AG48 N/A
    858526 8q4f:s (3.1) BS01 rna N/A GO:0000027 ... P0ADZ0 N/A
    858527 8q4f:t (3.1) BS01 rna N/A GO:0000027 ... P60624 N/A
    858528 8q4f:u (3.1) BS01 rna N/A GO:0000027 ... P68919 N/A
    858529 8q4f:v (3.1) BS01 rna N/A GO:0000027 ... P0A7L8 N/A
    858530 8q4f:v (3.1) BS02 rna N/A GO:0000027 ... P0A7L8 N/A
    858531 8q4f:w (3.1) BS01 rna N/A GO:0000027 ... P0A7M2 N/A
    858532 8q4f:x (3.1) BS01 rna N/A GO:0000027 ... P0A7M6 N/A
    858533 8q4f:y (3.1) BS01 rna N/A GO:0000027 ... P0AG51 N/A
    858534 8q4f:y (3.1) BS02 rna N/A GO:0000027 ... P0AG51 N/A
    858535 8q4f:z (3.1) BS01 rna N/A GO:0000027 ... P0A7N4 N/A
    858536 8q4h:A (2.83) BS01 JYF 1.21.99.5 GO:0005886 ... Q8GJ31 37923808
    858537 8q4h:A (2.83) BS02 COB 1.21.99.5 GO:0005886 ... Q8GJ31 37923808
    858538 8q4h:A (2.83) BS03 SF4 1.21.99.5 GO:0005886 ... Q8GJ31 37923808
    858539 8q4h:A (2.83) BS04 SF4 1.21.99.5 GO:0005886 ... Q8GJ31 37923808
    858540 8q4h:A (2.83) BS05 MQ7 1.21.99.5 GO:0005886 ... Q8GJ31 37923808
    858541 8q4h:B (2.83) BS01 JYF 1.21.99.5 GO:0005886 ... Q8GJ31 37923808
    858542 8q4h:B (2.83) BS02 COB 1.21.99.5 GO:0005886 ... Q8GJ31 37923808
    858543 8q4h:B (2.83) BS03 SF4 1.21.99.5 GO:0005886 ... Q8GJ31 37923808
    858544 8q4h:B (2.83) BS04 SF4 1.21.99.5 GO:0005886 ... Q8GJ31 37923808
    858545 8q4h:B (2.83) BS05 MQ7 1.21.99.5 GO:0005886 ... Q8GJ31 37923808
    858546 8q4m:A (1.43) BS01 J9B ? GO:0003723 ... Q96MU7 38787793
    858547 8q4m:B (1.43) BS01 J9B ? GO:0003723 ... Q96MU7 38787793
    858548 8q4n:A (1.42) BS01 JIR ? GO:0003723 ... Q96MU7 38787793
    858549 8q4n:B (1.42) BS01 JIR ? GO:0003723 ... Q96MU7 38787793
    858550 8q4p:A (1.43) BS01 JII ? GO:0003723 ... Q96MU7 38787793
    858551 8q4p:B (1.43) BS01 JII ? GO:0003723 ... Q96MU7 38787793
    858552 8q4q:A (1.4) BS01 JIB ? GO:0003723 ... Q96MU7 38787793
    858553 8q4q:B (1.4) BS01 JIB ? GO:0003723 ... Q96MU7 38787793
    858554 8q4r:A (1.43) BS01 JHU ? GO:0003723 ... Q96MU7 38787793
    858555 8q4r:B (1.43) BS01 JHU ? GO:0003723 ... Q96MU7 38787793
    858556 8q4s:A (2.08) BS01 E7P N/A GO:0006564 ... Q8YI30 N/A
    858557 8q4s:A (2.08) BS02 MG N/A GO:0006564 ... Q8YI30 N/A
    858558 8q4t:A (1.51) BS01 JBD ? GO:0003723 ... Q96MU7 38787793
    858559 8q4t:B (1.51) BS01 JBD ? GO:0003723 ... Q96MU7 38787793
    858560 8q4u:A (1.37) BS01 JA0 ? GO:0003723 ... Q96MU7 38787793
    858561 8q4u:B (1.37) BS01 JA0 ? GO:0003723 ... Q96MU7 38787793
    858562 8q4v:A (1.36) BS01 JO0 ? GO:0003723 ... Q96MU7 38787793
    858563 8q4v:B (1.36) BS01 JO0 ? GO:0003723 ... Q96MU7 38787793
    858564 8q4w:A (1.61) BS01 JNC ? GO:0003723 ... Q96MU7 38787793
    858565 8q4w:B (1.61) BS01 JNC ? GO:0003723 ... Q96MU7 38787793
    858566 8q50:A (1.91) BS01 FES 1.18.6.1 GO:0005524 ... P25767 38696373
    858567 8q54:A (2.39) BS01 JCV N/A GO:0005886 ... P80184 N/A
    858568 8q54:A (2.39) BS02 JCV N/A GO:0005886 ... P80184 N/A
    858569 8q54:B (2.39) BS01 MG N/A GO:0005886 ... Q59584 N/A
    858570 8q54:B (2.39) BS02 JCV N/A GO:0005886 ... Q59584 N/A
    858571 8q54:C (2.39) BS01 JCV N/A GO:0005886 ... P80185 N/A
    858572 8q54:C (2.39) BS02 JCV N/A GO:0005886 ... P80185 N/A
    858573 8q54:E (2.39) BS01 COM N/A GO:0005737 ... P80186 N/A
    858574 8q54:E (2.39) BS02 JCV N/A GO:0005737 ... P80186 N/A
    858575 8q54:E (2.39) BS03 JCV N/A GO:0005737 ... P80186 N/A
    858576 8q54:E (2.39) BS04 JCV N/A GO:0005737 ... P80186 N/A
    858577 8q54:F (2.39) BS01 JCV N/A GO:0005886 ... Q50773 N/A
    858578 8q54:F (2.39) BS02 JCV N/A GO:0005886 ... Q50773 N/A
    858579 8q54:G (2.39) BS01 JCV N/A GO:0005886 ... Q50774 N/A
    858580 8q54:G (2.39) BS02 JCV N/A GO:0005886 ... Q50774 N/A
    858581 8q54:Q (2.39) BS01 JCV N/A GO:0005886 ... P80184 N/A
    858582 8q54:Q (2.39) BS02 JCV N/A GO:0005886 ... P80184 N/A
    858583 8q54:R (2.39) BS01 MG N/A GO:0005886 ... Q59584 N/A
    858584 8q54:R (2.39) BS02 JCV N/A GO:0005886 ... Q59584 N/A
    858585 8q54:S (2.39) BS01 JCV N/A GO:0005886 ... P80185 N/A
    858586 8q54:U (2.39) BS01 JCV N/A GO:0005737 ... P80186 N/A
    858587 8q54:U (2.39) BS02 COM N/A GO:0005737 ... P80186 N/A
    858588 8q54:U (2.39) BS03 JCV N/A GO:0005737 ... P80186 N/A
    858589 8q54:U (2.39) BS04 JCV N/A GO:0005737 ... P80186 N/A
    858590 8q54:U (2.39) BS05 JCV N/A GO:0005737 ... P80186 N/A
    858591 8q54:V (2.39) BS01 JCV N/A GO:0005886 ... Q50773 N/A
    858592 8q54:V (2.39) BS02 JCV N/A GO:0005886 ... Q50773 N/A
    858593 8q54:W (2.39) BS01 JCV N/A GO:0005886 ... Q50774 N/A
    858594 8q54:a (2.39) BS01 JCV N/A GO:0005886 ... P80184 N/A
    858595 8q54:a (2.39) BS02 JCV N/A GO:0005886 ... P80184 N/A
    858596 8q54:b (2.39) BS01 MG N/A GO:0005886 ... Q59584 N/A
    858597 8q54:b (2.39) BS02 JCV N/A GO:0005886 ... Q59584 N/A
    858598 8q54:c (2.39) BS01 JCV N/A GO:0005886 ... P80185 N/A
    858599 8q54:c (2.39) BS02 JCV N/A GO:0005886 ... P80185 N/A
    858600 8q54:e (2.39) BS01 JCV N/A GO:0005737 ... P80186 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).