SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    859401 8pkl:B (3.09) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    859402 8pkl:C (3.09) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    859403 8pkl:C (3.09) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    859404 8pkl:D (3.09) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    859405 8pkl:E (3.09) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    859406 8pkl:E (3.09) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    859407 8pkl:F (3.09) BS01 rna ? GO:0002181 ... P02358 38409277
    859408 8pkl:G (3.09) BS01 rna ? GO:0000028 ... P02359 38409277
    859409 8pkl:G (3.09) BS02 rna ? GO:0000028 ... P02359 38409277
    859410 8pkl:H (3.09) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    859411 8pkl:I (3.09) BS01 rna ? GO:0002181 ... P0A7X3 38409277
    859412 8pkl:I (3.09) BS02 rna ? GO:0002181 ... P0A7X3 38409277
    859413 8pkl:J (3.09) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    859414 8pkl:K (3.09) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    859415 8pkl:L (3.09) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    859416 8pkl:M (3.09) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    859417 8pkl:M (3.09) BS02 rna ? GO:0000049 ... P0A7S9 38409277
    859418 8pkl:N (3.09) BS01 rna ? GO:0000028 ... P0AG59 38409277
    859419 8pkl:O (3.09) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    859420 8pkl:O (3.09) BS02 rna ? GO:0000028 ... P0ADZ4 38409277
    859421 8pkl:P (3.09) BS01 rna ? GO:0000028 ... P0A7T3 38409277
    859422 8pkl:Q (3.09) BS01 rna ? GO:0000028 ... P0AG63 38409277
    859423 8pkl:R (3.09) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    859424 8pkl:S (3.09) BS01 rna ? GO:0002181 ... P0A7U3 38409277
    859425 8pkl:T (3.09) BS01 rna ? GO:0000028 ... P0A7U7 38409277
    859426 8pkl:U (3.09) BS01 rna ? GO:0000028 ... P68679 38409277
    859427 8pkl:a (3.09) BS01 rna ? GO:0000027 ... P0A7L0 38409277
    859428 8pkl:b (3.09) BS01 rna ? GO:0000027 ... P60422 38409277
    859429 8pkl:b (3.09) BS02 rna ? GO:0000027 ... P60422 38409277
    859430 8pkl:c (3.09) BS01 rna ? GO:0000027 ... P60438 38409277
    859431 8pkl:d (3.09) BS01 rna ? GO:0001070 ... P60723 38409277
    859432 8pkl:e (3.09) BS01 rna ? GO:0000027 ... P62399 38409277
    859433 8pkl:e (3.09) BS02 rna ? GO:0000027 ... P62399 38409277
    859434 8pkl:e (3.09) BS03 rna ? GO:0000027 ... P62399 38409277
    859435 8pkl:f (3.09) BS01 rna ? GO:0000027 ... P0AG55 38409277
    859436 8pkl:g (3.09) BS01 rna ? GO:0000027 ... P0A7N9 38409277
    859437 8pkl:h (3.09) BS01 rna ? GO:0000027 ... P0ADY7 38409277
    859438 8pkl:h (3.09) BS02 rna ? GO:0000027 ... P0ADY7 38409277
    859439 8pkl:h (3.09) BS03 rna ? GO:0000027 ... P0ADY7 38409277
    859440 8pkl:i (3.09) BS01 rna ? GO:0002181 ... P0A7R1 38409277
    859441 8pkl:j (3.09) BS01 rna ? GO:0002181 ... P0A7J3 38409277
    859442 8pkl:k (3.09) BS01 rna ? GO:0000027 ... P0A7J7 38409277
    859443 8pkl:l (3.09) BS01 rna ? GO:0002181 ... P0A7P5 38409277
    859444 8pkl:m (3.09) BS01 rna ? GO:0002181 ... P0AA10 38409277
    859445 8pkl:n (3.09) BS01 rna ? GO:0002181 ... P0ADY3 38409277
    859446 8pkl:n (3.09) BS02 rna ? GO:0002181 ... P0ADY3 38409277
    859447 8pkl:o (3.09) BS01 rna ? GO:0002181 ... P02413 38409277
    859448 8pkl:p (3.09) BS01 rna N/A N/A N/A 38409277
    859449 8pkl:q (3.09) BS01 rna ? GO:0000027 ... P0AG44 38409277
    859450 8pkl:r (3.09) BS01 rna ? GO:0002181 ... P0C018 38409277
    859451 8pkl:r (3.09) BS02 rna ? GO:0002181 ... P0C018 38409277
    859452 8pkl:s (3.09) BS01 rna ? GO:0000027 ... P0A7K6 38409277
    859453 8pkl:s (3.09) BS02 rna ? GO:0000027 ... P0A7K6 38409277
    859454 8pkl:t (3.09) BS01 rna ? GO:0000027 ... P0A7L3 38409277
    859455 8pkl:u (3.09) BS01 rna ? GO:0002181 ... P0AG48 38409277
    859456 8pkl:v (3.09) BS01 rna ? GO:0002181 ... P61175 38409277
    859457 8pkl:w (3.09) BS01 rna ? GO:0000027 ... P0ADZ0 38409277
    859458 8pkl:x (3.09) BS01 rna ? GO:0000027 ... P60624 38409277
    859459 8pkl:y (3.09) BS01 rna ? GO:0000027 ... P68919 38409277
    859460 8pkl:y (3.09) BS02 rna ? GO:0000027 ... P68919 38409277
    859461 8pkl:z (3.09) BS01 rna ? GO:0000027 ... P0A7L8 38409277
    859462 8pkl:z (3.09) BS02 rna ? GO:0000027 ... P0A7L8 38409277
    859463 8pkl:z (3.09) BS03 rna ? GO:0000027 ... P0A7L8 38409277
    859464 8pkm:R (2.9) BS01 CLR ? GO:0001586 ... P08908 40531992
    859465 8pkm:R (2.9) BS02 T7M ? GO:0001586 ... P08908 40531992
    859466 8pkm:R (2.9) BS03 ZKV ? GO:0001586 ... P08908 40531992
    859467 8pkn:A (2.26) BS01 117 N/A GO:0004420 ... P04035 39976191
    859468 8pkp:K (3.2) BS01 peptide ? GO:0005515 ... Q13042 39567505
    859469 8pkp:N (3.2) BS01 ZN ? GO:0005515 ... Q9UJX6 39567505
    859470 8pkp:Q (3.2) BS01 peptide ? GO:0005515 ... Q13042 39567505
    859471 8pku:B (1.73) BS01 peptide ? N/A Q14145 37917529
    859472 8pkv:B (1.55) BS01 peptide ? N/A Q14145 37917529
    859473 8pkw:B (1.54) BS01 peptide ? N/A Q14145 37917529
    859474 8pkx:B (1.79) BS01 peptide ? N/A Q14145 37917529
    859475 8pky:A (1.4) BS01 FMN 2.7.13.3 N/A B8GAY9 38038877
    859476 8pky:B (1.4) BS01 FMN 2.7.13.3 N/A B8GAY9 38038877
    859477 8pkz:A (-1.00) BS01 5GP N/A N/A Q72H73 39615687
    859478 8pkz:A (-1.00) BS02 5GP N/A N/A Q72H73 39615687
    859479 8pl0:A (1.7) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859480 8pl0:A (1.7) BS02 I8G 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859481 8pl0:B (1.7) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859482 8pl1:A (2.46) BS01 FAD 1.8.1.9 GO:0003824 ... A0A3Q0KFL1 38238498
    859483 8pl1:A (2.46) BS02 UVS 1.8.1.9 GO:0003824 ... A0A3Q0KFL1 38238498
    859484 8pl1:A (2.46) BS03 UVS 1.8.1.9 GO:0003824 ... A0A3Q0KFL1 38238498
    859485 8pl1:B (2.46) BS01 FAD 1.8.1.9 GO:0003824 ... A0A3Q0KFL1 38238498
    859486 8pl1:B (2.46) BS02 UVS 1.8.1.9 GO:0003824 ... A0A3Q0KFL1 38238498
    859487 8pl1:B (2.46) BS03 UVS 1.8.1.9 GO:0003824 ... A0A3Q0KFL1 38238498
    859488 8pl2:A (1.88) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859489 8pl2:B (1.88) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859490 8pl2:B (1.88) BS02 ZMT 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859491 8pl3:A (1.65) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859492 8pl3:A (1.65) BS02 ZMI 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859493 8pl3:A (1.65) BS03 ZMI 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859494 8pl3:B (1.65) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859495 8pl3:B (1.65) BS02 ZMI 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859496 8pl4:A (1.97) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859497 8pl4:A (1.97) BS02 ZMC 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859498 8pl4:A (1.97) BS03 ZMC 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859499 8pl4:B (1.97) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859500 8pl4:B (1.97) BS02 ZMC 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859501 8pl5:A (2.15) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859502 8pl5:A (2.15) BS02 ZM8 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859503 8pl5:A (2.15) BS03 ZM8 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859504 8pl5:B (2.15) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859505 8pl5:B (2.15) BS02 ZM8 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859506 8pl5:B (2.15) BS03 ZM8 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859507 8pl6:A (1.81) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859508 8pl6:A (1.81) BS02 ZLX 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859509 8pl6:A (1.81) BS03 ZLX 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859510 8pl7:A (1.77) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859511 8pl7:A (1.77) BS02 ZLT 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859512 8pl7:B (1.77) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859513 8pl7:B (1.77) BS02 ZLT 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859514 8pl7:B (1.77) BS03 ZLT 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859515 8pl8:A (2.35) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859516 8pl8:A (2.35) BS02 ZLO 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859517 8pl8:A (2.35) BS03 ZLO 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859518 8pl9:A (1.98) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859519 8pl9:A (1.98) BS02 O3D 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859520 8pl9:B (1.98) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859521 8pl9:B (1.98) BS02 O3D 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859522 8pla:A (1.66) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859523 8pla:A (1.66) BS02 ZLI 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859524 8pla:B (1.66) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859525 8plb:A (2.0) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859526 8plb:A (2.0) BS02 VWY 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859527 8plb:B (2.0) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859528 8plb:B (2.0) BS02 VWY 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859529 8plc:A (2.34) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859530 8plc:A (2.34) BS02 A7N 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859531 8plc:B (2.34) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859532 8plc:B (2.34) BS02 A7N 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859533 8pld:A (1.85) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859534 8pld:A (1.85) BS02 T9Q 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859535 8pld:A (1.85) BS03 T9Q 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859536 8pld:B (1.85) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859537 8pld:B (1.85) BS02 T9Q 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859538 8pld:B (1.85) BS03 T9Q 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859539 8ple:A (1.94) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859540 8ple:A (1.94) BS02 VZS 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859541 8ple:A (1.94) BS03 VZS 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859542 8ple:A (1.94) BS04 VZS 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859543 8ple:B (1.94) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859544 8ple:B (1.94) BS02 VZS 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859545 8plf:A (1.95) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859546 8plf:A (1.95) BS02 NZ1 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859547 8plf:A (1.95) BS03 NZ1 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859548 8plf:B (1.95) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859549 8plf:B (1.95) BS02 NZ1 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859550 8plg:A (1.75) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859551 8plg:A (1.75) BS02 YI6 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859552 8plh:A (1.62) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859553 8plh:A (1.62) BS02 GVY 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859554 8plh:A (1.62) BS03 GVY 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859555 8pli:A (2.33) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859556 8pli:A (2.33) BS02 WZY 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859557 8pli:B (2.33) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859558 8plj:A (2.18) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859559 8plj:A (2.18) BS02 ZP8 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859560 8plj:B (2.18) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859561 8plj:B (2.18) BS02 ZP8 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859562 8plk:A (1.82) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859563 8plk:A (1.82) BS02 JO1 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859564 8plk:A (1.82) BS03 JO1 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859565 8plk:B (1.82) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859566 8plk:B (1.82) BS02 JO1 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859567 8plk:B (1.82) BS03 JO1 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859568 8pll:A (1.85) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859569 8pll:A (1.85) BS02 AYV 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859570 8plm:A (1.95) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859571 8plm:A (1.95) BS02 JJ7 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859572 8plm:A (1.95) BS03 JJ7 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859573 8pln:A (2.8) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859574 8pln:A (2.8) BS02 ZPI 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859575 8plo:A (1.74) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859576 8plo:A (1.74) BS02 WLY 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859577 8plo:A (1.74) BS03 WLY 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859578 8plo:B (1.74) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859579 8plo:B (1.74) BS02 WLY 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859580 8plp:A (2.28) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859581 8plp:A (2.28) BS02 WO1 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859582 8plp:B (2.28) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859583 8plp:B (2.28) BS02 WO1 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859584 8plq:A (2.29) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859585 8plq:B (2.29) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859586 8plq:B (2.29) BS02 TEK 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859587 8plr:A (2.72) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859588 8plr:A (2.72) BS02 MJ4 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859589 8plr:B (2.72) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859590 8pls:A (1.8) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859591 8pls:A (1.8) BS02 B0M 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859592 8pls:B (1.8) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859593 8pls:B (1.8) BS02 B0M 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859594 8plt:A (2.33) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859595 8plt:A (2.33) BS02 NVD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859596 8plt:B (2.33) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859597 8plu:A (2.04) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859598 8plu:A (2.04) BS02 ZPU 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859599 8plu:A (2.04) BS03 ZPU 1.8.1.9 GO:0003824 ... Q962Y6 38238498
    859600 8plu:B (2.04) BS01 FAD 1.8.1.9 GO:0003824 ... Q962Y6 38238498

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).