SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    859801 8pn2:A (2.63) BS02 MG ? GO:0005654 ... B4XT64 38600265
    859802 8pn2:B (2.63) BS01 ATP ? GO:0005654 ... B4XT64 38600265
    859803 8pn2:B (2.63) BS02 MG ? GO:0005654 ... B4XT64 38600265
    859804 8pn2:C (2.63) BS01 ATP ? GO:0005654 ... B4XT64 38600265
    859805 8pn2:C (2.63) BS02 MG ? GO:0005654 ... B4XT64 38600265
    859806 8pn2:D (2.63) BS01 ATP ? GO:0005654 ... B4XT64 38600265
    859807 8pn2:D (2.63) BS02 MG ? GO:0005654 ... B4XT64 38600265
    859808 8pn2:E (2.63) BS01 ATP ? GO:0005654 ... B4XT64 38600265
    859809 8pn2:E (2.63) BS02 MG ? GO:0005654 ... B4XT64 38600265
    859810 8pn2:F (2.63) BS01 ATP ? GO:0005654 ... B4XT64 38600265
    859811 8pn2:F (2.63) BS02 MG ? GO:0005654 ... B4XT64 38600265
    859812 8pn3:A (1.44) BS01 peptide ? GO:0004553 ... N/A N/A
    859813 8pn3:A (1.44) BS02 ZN ? GO:0004553 ... N/A N/A
    859814 8pn3:A (1.44) BS03 ZN ? GO:0004553 ... N/A N/A
    859815 8pn3:B (1.44) BS01 peptide ? GO:0004553 ... N/A N/A
    859816 8pn4:A (2.6) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    859817 8pn4:A (2.6) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    859818 8pn4:A (2.6) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    859819 8pn4:D (2.6) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    859820 8pn4:D (2.6) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    859821 8pn4:D (2.6) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    859822 8pn4:G (2.6) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    859823 8pn4:G (2.6) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    859824 8pn4:J (2.6) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    859825 8pn4:J (2.6) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    859826 8pn4:M (2.6) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    859827 8pn5:A (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    859828 8pn5:A (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    859829 8pn5:B (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    859830 8pn5:B (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    859831 8pn5:C (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    859832 8pn5:D (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    859833 8pn5:E (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    859834 8pn5:E (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    859835 8pn5:F (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    859836 8pn5:F (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    859837 8pn5:G (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    859838 8pn5:G (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    859839 8pn5:H (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    859840 8pn5:H (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    859841 8pn7:A (2.03) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859842 8pn7:A (2.03) BS02 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859843 8pn7:A (2.03) BS03 BTI 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859844 8pn7:B (2.03) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859845 8pn7:B (2.03) BS02 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859846 8pn7:B (2.03) BS03 BTI 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859847 8pn7:C (2.03) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859848 8pn7:C (2.03) BS02 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859849 8pn7:C (2.03) BS03 BTI 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859850 8pn7:D (2.03) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859851 8pn7:D (2.03) BS02 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859852 8pn7:D (2.03) BS03 BTI 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859853 8pn7:E (2.03) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859854 8pn7:E (2.03) BS02 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859855 8pn7:E (2.03) BS03 BTI 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859856 8pn7:F (2.03) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859857 8pn7:F (2.03) BS02 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859858 8pn7:F (2.03) BS03 BTI 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859859 8pn7:G (2.03) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859860 8pn7:H (2.03) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859861 8pn7:I (2.03) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859862 8pn7:J (2.03) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859863 8pn7:K (2.03) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859864 8pn7:L (2.03) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859865 8pn8:A (2.31) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859866 8pn8:B (2.31) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859867 8pn8:C (2.31) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859868 8pn8:D (2.31) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859869 8pn8:E (2.31) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859870 8pn8:F (2.31) BS01 COA 6.4.1.3 GO:0003989 ... C5AP75 37983631
    859871 8pn8:G (2.31) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859872 8pn8:H (2.31) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859873 8pn8:I (2.31) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859874 8pn8:J (2.31) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859875 8pn8:K (2.31) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859876 8pn8:L (2.31) BS01 BTI 6.4.1.3 GO:0000166 ... C5AWU5 37983631
    859877 8pn9:A (3.61) BS01 MAN 2.4.99.18 GO:0004576 ... P46977 38670073
    859878 8pn9:A (3.61) BS02 KZB 2.4.99.18 GO:0004576 ... P46977 38670073
    859879 8pn9:A (3.61) BS03 KZB 2.4.99.18 GO:0004576 ... P46977 38670073
    859880 8pn9:A (3.61) BS04 EGY 2.4.99.18 GO:0004576 ... P46977 38670073
    859881 8pn9:A (3.61) BS05 MN 2.4.99.18 GO:0004576 ... P46977 38670073
    859882 8pn9:A (3.61) BS06 OTP 2.4.99.18 GO:0004576 ... P46977 38670073
    859883 8pn9:A (3.61) BS07 ZXT 2.4.99.18 GO:0004576 ... P46977 38670073
    859884 8pn9:A (3.61) BS08 EGY 2.4.99.18 GO:0004576 ... P46977 38670073
    859885 8pn9:D (3.61) BS01 GLC ? GO:0005789 ... P61803 38670073
    859886 8pn9:F (3.61) BS01 MAN ? GO:0008250 ... P04844 38670073
    859887 8pn9:F (3.61) BS02 EGY ? GO:0008250 ... P04844 38670073
    859888 8pn9:G (3.61) BS01 MAN ? GO:0005789 ... P39656 38670073
    859889 8pn9:G (3.61) BS02 EGY ? GO:0005789 ... P39656 38670073
    859890 8pn9:G (3.61) BS03 KZB ? GO:0005789 ... P39656 38670073
    859891 8pn9:H (3.61) BS01 KZB ? GO:0004579 ... Q9NRP0 38670073
    859892 8pn9:H (3.61) BS02 EGY ? GO:0004579 ... Q9NRP0 38670073
    859893 8pna:A (1.45) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    859894 8pna:A (1.45) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    859895 8pnc:A (2.05) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    859896 8pnc:A (2.05) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    859897 8pnc:A (2.05) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    859898 8pnc:E (2.05) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    859899 8pnc:E (2.05) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    859900 8pnc:H (2.05) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    859901 8pnc:H (2.05) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    859902 8pnc:H (2.05) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    859903 8pnc:K (2.05) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    859904 8pnc:K (2.05) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    859905 8pnc:K (2.05) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    859906 8pnd:A (1.9) BS01 ZWW 2.5.1.61 GO:0004418 ... P08397 37863644
    859907 8pnd:B (1.9) BS01 ZWW 2.5.1.61 GO:0004418 ... P08397 37863644
    859908 8pne:A (1.9) BS01 MG N/A GO:0000287 ... P0A8Y3 N/A
    859909 8pne:A (1.9) BS02 CA N/A GO:0000287 ... P0A8Y3 N/A
    859910 8png:A (1.94) BS01 FAD N/A GO:0016627 ... Q9I610 40057486
    859911 8png:A (1.94) BS02 FAD N/A GO:0016627 ... Q9I610 40057486
    859912 8png:B (1.94) BS01 FAD N/A GO:0016627 ... Q9I610 40057486
    859913 8png:B (1.94) BS02 FAD N/A GO:0016627 ... Q9I610 40057486
    859914 8pnh:A (1.9) BS01 TSA N/A GO:0004106 ... A0ACD6BAV7 N/A
    859915 8pnh:A (1.9) BS02 PPY N/A GO:0004106 ... A0ACD6BAV7 N/A
    859916 8pnj:A (2.355) BS01 TSA N/A GO:0004106 ... A0AAX7FLT0 N/A
    859917 8pnn:0 (2.9) BS01 rna N/A GO:0002181 ... P0CX23 40119759
    859918 8pnn:0 (2.9) BS02 rna N/A GO:0002181 ... P0CX23 40119759
    859919 8pnn:2 (2.9) BS01 rna N/A GO:0002181 ... Q02753 40119759
    859920 8pnn:2 (2.9) BS02 rna N/A GO:0002181 ... Q02753 40119759
    859921 8pnn:2 (2.9) BS03 OHX N/A GO:0002181 ... Q02753 40119759
    859922 8pnn:5 (2.9) BS01 rna N/A GO:0002181 ... P05749 40119759
    859923 8pnn:6 (2.9) BS01 rna N/A GO:0002181 ... P0CX41 40119759
    859924 8pnn:6 (2.9) BS02 rna N/A GO:0002181 ... P0CX41 40119759
    859925 8pnn:7 (2.9) BS01 rna N/A GO:0002181 ... P04449 40119759
    859926 8pnn:8 (2.9) BS01 rna N/A GO:0000027 ... P04456 40119759
    859927 8pnn:8 (2.9) BS02 rna N/A GO:0000027 ... P04456 40119759
    859928 8pnn:9 (2.9) BS01 rna N/A GO:0002181 ... P05743 40119759
    859929 8pnn:9 (2.9) BS02 rna N/A GO:0002181 ... P05743 40119759
    859930 8pnn:AA (2.9) BS01 rna N/A GO:0002181 ... P0C2H6 40119759
    859931 8pnn:AB (2.9) BS01 rna N/A GO:0002181 ... P02406 40119759
    859932 8pnn:AB (2.9) BS02 MG N/A GO:0002181 ... P02406 40119759
    859933 8pnn:AC (2.9) BS01 rna N/A GO:0002181 ... P05747 40119759
    859934 8pnn:AC (2.9) BS02 OHX N/A GO:0002181 ... P05747 40119759
    859935 8pnn:AD (2.9) BS01 rna N/A GO:0002181 ... P14120 40119759
    859936 8pnn:AE (2.9) BS01 rna N/A GO:0002181 ... P0C2H8 40119759
    859937 8pnn:AF (2.9) BS01 rna N/A GO:0002181 ... P38061 40119759
    859938 8pnn:AF (2.9) BS02 MG N/A GO:0002181 ... P38061 40119759
    859939 8pnn:AF (2.9) BS03 MG N/A GO:0002181 ... P38061 40119759
    859940 8pnn:AF (2.9) BS04 OHX N/A GO:0002181 ... P38061 40119759
    859941 8pnn:AG (2.9) BS01 rna N/A GO:0000027 ... P05744 40119759
    859942 8pnn:AG (2.9) BS02 OHX N/A GO:0000027 ... P05744 40119759
    859943 8pnn:AH (2.9) BS01 rna N/A GO:0002181 ... P87262 40119759
    859944 8pnn:AH (2.9) BS02 MG N/A GO:0002181 ... P87262 40119759
    859945 8pnn:AI (2.9) BS01 rna N/A GO:0000463 ... P0CX84 40119759
    859946 8pnn:AI (2.9) BS02 rna N/A GO:0000463 ... P0CX84 40119759
    859947 8pnn:AJ (2.9) BS01 rna N/A GO:0000470 ... P05745 40119759
    859948 8pnn:AK (2.9) BS01 rna N/A GO:0000448 ... P49166 40119759
    859949 8pnn:AK (2.9) BS02 rna N/A GO:0000448 ... P49166 40119759
    859950 8pnn:AK (2.9) BS03 ZN N/A GO:0000448 ... P49166 40119759
    859951 8pnn:AK (2.9) BS04 OHX N/A GO:0000448 ... P49166 40119759
    859952 8pnn:AK (2.9) BS05 OHX N/A GO:0000448 ... P49166 40119759
    859953 8pnn:AK (2.9) BS06 OHX N/A GO:0000448 ... P49166 40119759
    859954 8pnn:AL (2.9) BS01 rna N/A GO:0002181 ... P49167 40119759
    859955 8pnn:AM (2.9) BS01 rna N/A GO:0002181 ... P04650 40119759
    859956 8pnn:AM (2.9) BS02 rna N/A GO:0002181 ... P04650 40119759
    859957 8pnn:AN (2.9) BS01 rna N/A GO:0000027 ... P0CH08 40119759
    859958 8pnn:AN (2.9) BS02 ZN N/A GO:0000027 ... P0CH08 40119759
    859959 8pnn:AP (2.9) BS01 rna N/A GO:0002181 ... P0CX27 40119759
    859960 8pnn:AP (2.9) BS02 ZN N/A GO:0002181 ... P0CX27 40119759
    859961 8pnn:AP (2.9) BS03 ZWB N/A GO:0002181 ... P0CX27 40119759
    859962 8pnn:AP (2.9) BS04 OHX N/A GO:0002181 ... P0CX27 40119759
    859963 8pnn:AQ (2.9) BS01 rna N/A GO:0002181 ... P0CX25 40119759
    859964 8pnn:AQ (2.9) BS02 ZN N/A GO:0002181 ... P0CX25 40119759
    859965 8pnn:B (2.9) BS01 rna N/A GO:0000028 ... P32905 40119759
    859966 8pnn:C (2.9) BS01 rna N/A GO:0000462 ... P33442 40119759
    859967 8pnn:C (2.9) BS02 OHX N/A GO:0000462 ... P33442 40119759
    859968 8pnn:CD (2.9) BS01 rna N/A GO:0002181 ... P0CX45 40119759
    859969 8pnn:CD (2.9) BS02 rna N/A GO:0002181 ... P0CX45 40119759
    859970 8pnn:CD (2.9) BS03 OHX N/A GO:0002181 ... P0CX45 40119759
    859971 8pnn:CE (2.9) BS01 rna N/A GO:0000027 ... P14126 40119759
    859972 8pnn:CE (2.9) BS02 MG N/A GO:0000027 ... P14126 40119759
    859973 8pnn:CE (2.9) BS03 OHX N/A GO:0000027 ... P14126 40119759
    859974 8pnn:CE (2.9) BS04 OHX N/A GO:0000027 ... P14126 40119759
    859975 8pnn:CE (2.9) BS05 MG N/A GO:0000027 ... P14126 40119759
    859976 8pnn:CE (2.9) BS06 MG N/A GO:0000027 ... P14126 40119759
    859977 8pnn:CF (2.9) BS01 rna N/A GO:0002181 ... P10664 40119759
    859978 8pnn:CF (2.9) BS02 rna N/A GO:0002181 ... P10664 40119759
    859979 8pnn:CG (2.9) BS01 rna N/A GO:0000027 ... P26321 40119759
    859980 8pnn:CG (2.9) BS02 rna N/A GO:0000027 ... P26321 40119759
    859981 8pnn:CG (2.9) BS03 OHX N/A GO:0000027 ... P26321 40119759
    859982 8pnn:CG (2.9) BS04 OHX N/A GO:0000027 ... P26321 40119759
    859983 8pnn:CH (2.9) BS01 rna N/A GO:0000027 ... Q02326 40119759
    859984 8pnn:CI (2.9) BS01 rna N/A GO:0000463 ... P05737 40119759
    859985 8pnn:CI (2.9) BS02 rna N/A GO:0000463 ... P05737 40119759
    859986 8pnn:CJ (2.9) BS01 rna N/A GO:0000470 ... P17076 40119759
    859987 8pnn:CJ (2.9) BS02 rna N/A GO:0000470 ... P17076 40119759
    859988 8pnn:CK (2.9) BS01 rna N/A GO:0002181 ... P05738 40119759
    859989 8pnn:CL (2.9) BS01 rna N/A GO:0000027 ... P41805 40119759
    859990 8pnn:CL (2.9) BS02 rna N/A GO:0000027 ... P41805 40119759
    859991 8pnn:CL (2.9) BS03 OHX N/A GO:0000027 ... P41805 40119759
    859992 8pnn:CL (2.9) BS04 OHX N/A GO:0000027 ... P41805 40119759
    859993 8pnn:CM (2.9) BS01 rna N/A GO:0000027 ... Q3E757 40119759
    859994 8pnn:CM (2.9) BS02 rna N/A GO:0000027 ... Q3E757 40119759
    859995 8pnn:CN (2.9) BS01 rna N/A GO:0002181 ... Q12690 40119759
    859996 8pnn:CN (2.9) BS02 rna N/A GO:0002181 ... Q12690 40119759
    859997 8pnn:CO (2.9) BS01 rna N/A GO:0000027 ... P36105 40119759
    859998 8pnn:CP (2.9) BS01 rna N/A GO:0000470 ... P05748 40119759
    859999 8pnn:CP (2.9) BS02 rna N/A GO:0000470 ... P05748 40119759
    860000 8pnn:CQ (2.9) BS01 rna N/A GO:0000470 ... P26784 40119759

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).