SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    860801 8psm:G (3.1) BS02 FMN 1.3.1.9
    2.3.1.38
    2.3.1.39
    2.3.1.86
    3.1.2.14
    4.2.1.59
    GO:0004312 ... P07149 37949058
    860802 8psn:A (2.73) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860803 8psn:A (2.73) BS02 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860804 8psn:B (2.73) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860805 8psn:B (2.73) BS02 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860806 8psn:B (2.73) BS03 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860807 8psn:B (2.73) BS04 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860808 8psn:C (2.73) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860809 8psn:C (2.73) BS02 ZN ? GO:0046872 ... A0A7G3S745 38066000
    860810 8psn:C (2.73) BS03 ZN ? GO:0046872 ... A0A7G3S745 38066000
    860811 8pso:A (2.4) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860812 8pso:A (2.4) BS02 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860813 8pso:A (2.4) BS03 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860814 8pso:B (2.4) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860815 8pso:B (2.4) BS02 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860816 8pso:B (2.4) BS03 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860817 8pso:B (2.4) BS04 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860818 8pso:C (2.4) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860819 8psp:G (2.9) BS01 PNS 1.3.1.9
    2.3.1.38
    2.3.1.39
    2.3.1.86
    3.1.2.14
    4.2.1.59
    GO:0004312 ... P07149 37949058
    860820 8psp:G (2.9) BS02 FMN 1.3.1.9
    2.3.1.38
    2.3.1.39
    2.3.1.86
    3.1.2.14
    4.2.1.59
    GO:0004312 ... P07149 37949058
    860821 8psq:A (2.65) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860822 8psq:A (2.65) BS02 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860823 8psq:A (2.65) BS03 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860824 8psq:B (2.65) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860825 8psq:B (2.65) BS02 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860826 8psq:C (2.65) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860827 8psr:A (1.85) BS01 peptide N/A GO:0000165 ... P28482 39366929
    860828 8psr:A (1.85) BS02 ANP N/A GO:0000165 ... P28482 39366929
    860829 8pss:A (2.83) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860830 8pss:A (2.83) BS02 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860831 8pss:A (2.83) BS03 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860832 8pss:B (2.83) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860833 8pss:B (2.83) BS02 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860834 8pss:C (2.83) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860835 8pst:A (1.9) BS01 AN2 N/A GO:0000165 ... P28482 39366929
    860836 8pst:A (1.9) BS02 DC6 N/A GO:0000165 ... P28482 39366929
    860837 8psu:A (3.18) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860838 8psu:A (3.18) BS02 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860839 8psu:B (3.18) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860840 8psu:C (3.18) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860841 8psw:A (2.0) BS01 AN2 N/A GO:0000165 ... P28482 39366929
    860842 8psw:A (2.0) BS02 D2I N/A GO:0000165 ... P28482 39366929
    860843 8psx:A (2.96) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860844 8psx:A (2.96) BS02 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860845 8psx:B (2.96) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860846 8psx:B (2.96) BS02 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860847 8psx:B (2.96) BS03 A0I ? GO:0001172 ... A0A1Y9SHW4 38066000
    860848 8psx:B (2.96) BS04 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860849 8psx:B (2.96) BS05 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860850 8psx:C (2.96) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860851 8psx:C (2.96) BS02 rna ? GO:0046872 ... A0A7G3S745 38066000
    860852 8psx:C (2.96) BS03 ZN ? GO:0046872 ... A0A7G3S745 38066000
    860853 8psx:C (2.96) BS04 ZN ? GO:0046872 ... A0A7G3S745 38066000
    860854 8psy:A (2.55) BS01 AN2 N/A GO:0000165 ... P28482 39366929
    860855 8psy:A (2.55) BS02 EI0 N/A GO:0000165 ... P28482 39366929
    860856 8psz:A (2.42) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860857 8psz:A (2.42) BS02 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860858 8psz:A (2.42) BS03 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860859 8psz:B (2.42) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860860 8psz:B (2.42) BS02 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860861 8psz:B (2.42) BS03 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860862 8psz:B (2.42) BS04 A0I ? GO:0001172 ... A0A1Y9SHW4 38066000
    860863 8psz:B (2.42) BS05 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860864 8psz:B (2.42) BS06 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860865 8psz:C (2.42) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860866 8psz:C (2.42) BS02 rna ? GO:0046872 ... A0A7G3S745 38066000
    860867 8psz:C (2.42) BS03 rna ? GO:0046872 ... A0A7G3S745 38066000
    860868 8psz:C (2.42) BS04 ZN ? GO:0046872 ... A0A7G3S745 38066000
    860869 8psz:C (2.42) BS05 ZN ? GO:0046872 ... A0A7G3S745 38066000
    860870 8pt0:A (1.65) BS01 ANP N/A GO:0000165 ... P28482 39366929
    860871 8pt0:A (1.65) BS02 EAI N/A GO:0000165 ... P28482 39366929
    860872 8pt1:A (1.8) BS01 ANP N/A GO:0000165 ... P28482 39366929
    860873 8pt1:A (1.8) BS02 E2A N/A GO:0000165 ... P28482 39366929
    860874 8pt2:A (2.59) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860875 8pt2:A (2.59) BS02 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860876 8pt2:A (2.59) BS03 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860877 8pt2:B (2.59) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860878 8pt2:C (2.59) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860879 8pt2:C (2.59) BS02 ZN ? GO:0046872 ... A0A7G3S745 38066000
    860880 8pt2:C (2.59) BS03 ZN ? GO:0046872 ... A0A7G3S745 38066000
    860881 8pt3:A (1.8) BS01 D7O N/A GO:0000165 ... P28482 39366929
    860882 8pt3:A (1.8) BS02 ANP N/A GO:0000165 ... P28482 39366929
    860883 8pt5:A (1.95) BS01 ANP N/A GO:0000165 ... P28482 39366929
    860884 8pt5:A (1.95) BS02 D5R N/A GO:0000165 ... P28482 39366929
    860885 8pt6:A (3.03) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860886 8pt6:A (3.03) BS02 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860887 8pt6:B (3.03) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860888 8pt6:B (3.03) BS02 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860889 8pt6:B (3.03) BS03 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860890 8pt6:B (3.03) BS04 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860891 8pt6:C (3.03) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860892 8pt6:C (3.03) BS02 ZN ? GO:0046872 ... A0A7G3S745 38066000
    860893 8pt6:C (3.03) BS03 ZN ? GO:0046872 ... A0A7G3S745 38066000
    860894 8pt7:A (2.8) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860895 8pt7:A (2.8) BS02 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860896 8pt7:A (2.8) BS03 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860897 8pt7:B (2.8) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860898 8pt7:B (2.8) BS02 MG ? GO:0001172 ... A0A1Y9SHW4 38066000
    860899 8pt7:C (2.8) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860900 8pt8:A (2.78) BS01 A3O N/A GO:0004672 ... P45983 39366946
    860901 8pt8:B (2.78) BS01 A3O N/A GO:0004672 ... P45983 39366946
    860902 8pt8:C (2.78) BS01 A3O N/A GO:0004672 ... P45983 39366946
    860903 8pt9:A (2.7) BS01 DVI N/A GO:0004672 ... P45983 39366946
    860904 8pt9:B (2.7) BS01 DVI N/A GO:0004672 ... P45983 39366946
    860905 8pt9:C (2.7) BS01 DVI N/A GO:0004672 ... P45983 39366946
    860906 8pta:A (2.41) BS01 CIF N/A GO:0004672 ... P45983 39366946
    860907 8pta:B (2.41) BS01 CIF N/A GO:0004672 ... P45983 39366946
    860908 8pta:C (2.41) BS01 CIF N/A GO:0004672 ... P45983 39366946
    860909 8ptc:A (1.51) BS01 F28 3.1.1.23 GO:0004622 ... Q99685 38241614
    860910 8ptd:A (1.6) BS01 B12 N/A N/A Q8A7N4 N/A
    860911 8pte:AAA (1.797) BS01 JQJ 3.2.1.17 GO:0003796 ... P00698 37768728
    860912 8pte:AAA (1.797) BS02 H1W 3.2.1.17 GO:0003796 ... P00698 37768728
    860913 8ptf:A (1.95) BS01 CBY N/A N/A Q8A7N4 N/A
    860914 8ptf:A (1.95) BS02 3P8 N/A N/A Q8A7N4 N/A
    860915 8ptg:A (2.9) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 38622114
    860916 8ptg:A (2.9) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860917 8ptg:A (2.9) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 38622114
    860918 8ptg:A (2.9) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860919 8ptg:B (2.9) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 38622114
    860920 8ptg:B (2.9) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860921 8ptg:B (2.9) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860922 8ptg:B (2.9) BS04 MG 3.6.4.- GO:0003676 ... P0AG30 38622114
    860923 8ptg:B (2.9) BS05 BEF 3.6.4.- GO:0003676 ... P0AG30 38622114
    860924 8ptg:C (2.9) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 38622114
    860925 8ptg:C (2.9) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860926 8ptg:C (2.9) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860927 8ptg:C (2.9) BS04 BEF 3.6.4.- GO:0003676 ... P0AG30 38622114
    860928 8ptg:D (2.9) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 38622114
    860929 8ptg:D (2.9) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860930 8ptg:D (2.9) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860931 8ptg:D (2.9) BS04 BEF 3.6.4.- GO:0003676 ... P0AG30 38622114
    860932 8ptg:E (2.9) BS01 rna 3.6.4.- GO:0003676 ... P0AG30 38622114
    860933 8ptg:E (2.9) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860934 8ptg:E (2.9) BS03 BEF 3.6.4.- GO:0003676 ... P0AG30 38622114
    860935 8ptg:F (2.9) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860936 8ptg:F (2.9) BS02 BEF 3.6.4.- GO:0003676 ... P0AG30 38622114
    860937 8pth:A (2.73) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860938 8pth:A (2.73) BS02 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860939 8pth:A (2.73) BS03 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860940 8pth:B (2.73) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860941 8pth:C (2.73) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860942 8ptj:A (2.86) BS01 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860943 8ptj:A (2.86) BS02 rna ? GO:0046872 ... A0A142I7Z3 38066000
    860944 8ptj:A (2.86) BS03 ZN ? GO:0046872 ... A0A142I7Z3 38066000
    860945 8ptj:B (2.86) BS01 rna ? GO:0001172 ... A0A1Y9SHW4 38066000
    860946 8ptj:C (2.86) BS01 rna ? GO:0046872 ... A0A7G3S745 38066000
    860947 8ptk:A (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    860948 8ptk:B (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    860949 8ptk:C (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    860950 8ptk:D (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    860951 8ptk:E (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    860952 8ptk:F (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    860953 8ptk:G (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    860954 8ptk:H (10.0) BS01 ATP 3.6.4.- GO:0001738 ... Q6QAQ1 38547289
    860955 8ptk:I (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    860956 8ptk:J (10.0) BS01 ATP ? GO:0005200 ... I3LHK5 38547289
    860957 8ptk:e (10.0) BS01 ADP ? GO:0001673 ... Q14204 38547289
    860958 8ptk:e (10.0) BS02 ATP ? GO:0001673 ... Q14204 38547289
    860959 8ptk:e (10.0) BS03 ADP ? GO:0001673 ... Q14204 38547289
    860960 8ptk:e (10.0) BS04 ADP ? GO:0001673 ... Q14204 38547289
    860961 8ptk:f (10.0) BS01 ADP ? GO:0001673 ... Q14204 38547289
    860962 8ptk:f (10.0) BS02 ATP ? GO:0001673 ... Q14204 38547289
    860963 8ptk:f (10.0) BS03 ADP ? GO:0001673 ... Q14204 38547289
    860964 8ptk:f (10.0) BS04 ADP ? GO:0001673 ... Q14204 38547289
    860965 8ptk:m (10.0) BS01 ADP ? GO:0001673 ... Q14204 38547289
    860966 8ptk:m (10.0) BS02 ATP ? GO:0001673 ... Q14204 38547289
    860967 8ptk:m (10.0) BS03 ANP ? GO:0001673 ... Q14204 38547289
    860968 8ptk:m (10.0) BS04 ANP ? GO:0001673 ... Q14204 38547289
    860969 8ptk:n (10.0) BS01 ADP ? GO:0001673 ... Q14204 38547289
    860970 8ptk:n (10.0) BS02 ATP ? GO:0001673 ... Q14204 38547289
    860971 8ptk:n (10.0) BS03 ANP ? GO:0001673 ... Q14204 38547289
    860972 8ptk:n (10.0) BS04 ANP ? GO:0001673 ... Q14204 38547289
    860973 8ptm:C (2.9) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860974 8ptm:D (2.9) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860975 8ptm:E (2.9) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860976 8pto:B (2.7) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860977 8pto:C (2.7) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860978 8pto:D (2.7) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    860979 8ptq:A (1.55) BS01 EJI 3.1.1.23 GO:0004622 ... Q99685 38241614
    860980 8ptr:A (1.73) BS01 EFH 3.1.1.23 GO:0004622 ... Q99685 38241614
    860981 8pts:A (1.76) BS01 EIF N/A GO:0001917 ... Q16774 39190717
    860982 8pts:B (1.76) BS01 EIF N/A GO:0001917 ... Q16774 39190717
    860983 8ptt:A (2.5) BS01 F2V N/A GO:0000287 ... Q9UKK9 N/A
    860984 8ptt:A (2.5) BS02 MG N/A GO:0000287 ... Q9UKK9 N/A
    860985 8ptt:A (2.5) BS03 F2V N/A GO:0000287 ... Q9UKK9 N/A
    860986 8ptt:B (2.5) BS01 F2V N/A GO:0000287 ... Q9UKK9 N/A
    860987 8ptt:B (2.5) BS02 F2V N/A GO:0000287 ... Q9UKK9 N/A
    860988 8ptt:B (2.5) BS03 MG N/A GO:0000287 ... Q9UKK9 N/A
    860989 8ptt:B (2.5) BS04 MG N/A GO:0000287 ... Q9UKK9 N/A
    860990 8ptt:C (2.5) BS01 F2V N/A GO:0000287 ... Q9UKK9 N/A
    860991 8ptt:C (2.5) BS02 MG N/A GO:0000287 ... Q9UKK9 N/A
    860992 8ptt:C (2.5) BS03 F2V N/A GO:0000287 ... Q9UKK9 N/A
    860993 8ptt:D (2.5) BS01 F2V N/A GO:0000287 ... Q9UKK9 N/A
    860994 8ptt:D (2.5) BS02 F2V N/A GO:0000287 ... Q9UKK9 N/A
    860995 8ptt:D (2.5) BS03 MG N/A GO:0000287 ... Q9UKK9 N/A
    860996 8ptv:A (1.6) BS01 FE N/A GO:0005506 ... P05326 N/A
    860997 8ptv:A (1.6) BS02 ACV N/A GO:0005506 ... P05326 N/A
    860998 8ptx:A (2.87) BS01 rna ? GO:0000049 ... O95163 38750017
    860999 8ptx:C (2.87) BS01 rna 2.3.1.311 GO:0001764 ... Q9H9T3 38750017
    861000 8ptx:C (2.87) BS02 SF4 2.3.1.311 GO:0001764 ... Q9H9T3 38750017

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).