SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4299 4300 4301 4302 4303 4304 4305 4306 4307 4308 4309 4310 4311 4312 4313 4314 4315 4316 4317 4318 4319 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    861601 8pv7:LV (2.12) BS01 rna ? GO:0003735 ... G0SI44 37921038
    861602 8pv7:LX (2.12) BS01 rna ? GO:0003735 ... G0S507 37921038
    861603 8pv7:LX (2.12) BS02 rna ? GO:0003735 ... G0S507 37921038
    861604 8pv7:LY (2.12) BS01 rna ? GO:0003723 ... G0RYN9 37921038
    861605 8pv7:LY (2.12) BS02 rna ? GO:0003723 ... G0RYN9 37921038
    861606 8pv7:LZ (2.12) BS01 rna ? GO:0003735 ... G0RZE9 37921038
    861607 8pv7:La (2.12) BS01 rna N/A GO:0003735 ... N/A 37921038
    861608 8pv7:Lc (2.12) BS01 rna ? GO:0003723 ... G0SEI0 37921038
    861609 8pv7:Ld (2.12) BS01 rna ? GO:0002181 ... G0SD68 37921038
    861610 8pv7:Le (2.12) BS01 rna ? GO:0003735 ... G0S6V4 37921038
    861611 8pv7:Lf (2.12) BS01 rna ? GO:0003735 ... G0SCL3 37921038
    861612 8pv7:Lg (2.12) BS01 rna ? GO:0003735 ... G0SFN0 37921038
    861613 8pv7:Lg (2.12) BS02 ZN ? GO:0003735 ... G0SFN0 37921038
    861614 8pv7:Lh (2.12) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    861615 8pv7:Lh (2.12) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    861616 8pv7:Li (2.12) BS01 rna ? GO:0003735 ... G0SBN1 37921038
    861617 8pv7:Lj (2.12) BS01 rna ? GO:0003723 ... G0S101 37921038
    861618 8pv7:Lj (2.12) BS02 rna ? GO:0003723 ... G0S101 37921038
    861619 8pv7:Lj (2.12) BS03 ZN ? GO:0003723 ... G0S101 37921038
    861620 8pv7:Lk (2.12) BS01 rna ? GO:0003735 ... G0SG89 37921038
    861621 8pv7:Ll (2.12) BS01 rna ? GO:0003735 ... Q2H9R2 37921038
    861622 8pv7:Ll (2.12) BS02 rna ? GO:0003735 ... Q2H9R2 37921038
    861623 8pv7:Lp (2.12) BS01 rna ? GO:0003735 ... G0S6B0 37921038
    861624 8pv7:Lp (2.12) BS02 ZN ? GO:0003735 ... G0S6B0 37921038
    861625 8pv7:Lq (2.12) BS01 rna ? GO:0003735 ... G0SHJ6 37921038
    861626 8pv8:CF (2.91) BS01 rna ? GO:0000027 ... G0S616 37921038
    861627 8pv8:CH (2.91) BS01 rna ? GO:0005525 ... G0S8F1 37921038
    861628 8pv8:CH (2.91) BS02 rna ? GO:0005525 ... G0S8F1 37921038
    861629 8pv8:CH (2.91) BS03 GTP ? GO:0005525 ... G0S8F1 37921038
    861630 8pv8:CH (2.91) BS04 MG ? GO:0005525 ... G0S8F1 37921038
    861631 8pv8:CK (2.91) BS01 rna ? GO:0005730 ... G0S081 37921038
    861632 8pv8:CL (2.91) BS01 rna ? GO:0005525 ... G0SEW3 37921038
    861633 8pv8:CL (2.91) BS02 rna ? GO:0005525 ... G0SEW3 37921038
    861634 8pv8:CN (2.91) BS01 rna ? GO:0000054 ... G0S683 37921038
    861635 8pv8:CO (2.91) BS01 rna ? GO:0030687 ... G0SHK0 37921038
    861636 8pv8:CQ (2.91) BS01 rna ? GO:0003735 ... G0S497 37921038
    861637 8pv8:CQ (2.91) BS02 ZN ? GO:0003735 ... G0S497 37921038
    861638 8pv8:CR (2.91) BS01 rna ? GO:0000055 ... G0S215 37921038
    861639 8pv8:CS (2.91) BS01 rna ? GO:0005634 ... P0CT45 37921038
    861640 8pv8:CU (2.91) BS01 rna ? GO:0005634 ... G0S1T5 37921038
    861641 8pv8:CW (2.91) BS01 rna ? GO:0005634 ... G0S5R0 37921038
    861642 8pv8:Cb (2.91) BS01 rna ? GO:0003676 ... G0SB32 37921038
    861643 8pv8:Cb (2.91) BS02 ZN ? GO:0003676 ... G0SB32 37921038
    861644 8pv8:Cd (2.91) BS01 rna ? GO:0005525 ... G0SBX1 37921038
    861645 8pv8:Cd (2.91) BS02 GTP ? GO:0005525 ... G0SBX1 37921038
    861646 8pv8:Cd (2.91) BS03 MG ? GO:0005525 ... G0SBX1 37921038
    861647 8pv8:Ch (2.91) BS01 rna ? GO:0000027 ... G0SC29 37921038
    861648 8pv8:Cz (2.91) BS01 rna ? GO:0005730 ... G0SCP3 37921038
    861649 8pv8:Cz (2.91) BS02 rna ? GO:0005730 ... G0SCP3 37921038
    861650 8pv8:LA (2.91) BS01 rna ? GO:0002181 ... G0S4P8 37921038
    861651 8pv8:LB (2.91) BS01 rna ? GO:0003723 ... G0RXW1 37921038
    861652 8pv8:LC (2.91) BS01 rna ? GO:0003735 ... G0SFC3 37921038
    861653 8pv8:LC (2.91) BS02 rna ? GO:0003735 ... G0SFC3 37921038
    861654 8pv8:LD (2.91) BS01 rna ? GO:0000027 ... G0SEG2 37921038
    861655 8pv8:LD (2.91) BS02 rna ? GO:0000027 ... G0SEG2 37921038
    861656 8pv8:LE (2.91) BS01 rna ? GO:0000027 ... G0S0D6 37921038
    861657 8pv8:LF (2.91) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    861658 8pv8:LF (2.91) BS02 rna ? GO:0000463 ... G0SFL0 37921038
    861659 8pv8:LG (2.91) BS01 rna ? GO:0003723 ... G0SAJ9 37921038
    861660 8pv8:LG (2.91) BS02 rna ? GO:0003723 ... G0SAJ9 37921038
    861661 8pv8:LH (2.91) BS01 rna N/A GO:0003735 ... G0S0E5 37921038
    861662 8pv8:LJ (2.91) BS01 rna ? GO:0003735 ... G0SHQ2 37921038
    861663 8pv8:LJ (2.91) BS02 rna ? GO:0003735 ... G0SHQ2 37921038
    861664 8pv8:LK (2.91) BS01 rna ? GO:0000027 ... G0SGH8 37921038
    861665 8pv8:LL (2.91) BS01 rna ? GO:0003723 ... G0S992 37921038
    861666 8pv8:LL (2.91) BS02 rna ? GO:0003723 ... G0S992 37921038
    861667 8pv8:LM (2.91) BS01 rna ? GO:0003723 ... G0S1R0 37921038
    861668 8pv8:LN (2.91) BS01 rna ? GO:0002181 ... G0RZ88 37921038
    861669 8pv8:LN (2.91) BS02 rna ? GO:0002181 ... G0RZ88 37921038
    861670 8pv8:LO (2.91) BS01 rna ? GO:0003729 ... G0SH61 37921038
    861671 8pv8:LP (2.91) BS01 rna ? GO:0002181 ... G0SGY1 37921038
    861672 8pv8:LP (2.91) BS02 rna ? GO:0002181 ... G0SGY1 37921038
    861673 8pv8:LQ (2.91) BS01 rna ? GO:0003723 ... G0S9B5 37921038
    861674 8pv8:LR (2.91) BS01 rna ? GO:0003735 ... G0S9T3 37921038
    861675 8pv8:LS (2.91) BS01 rna ? GO:0003735 ... G0SCE2 37921038
    861676 8pv8:LS (2.91) BS02 rna ? GO:0003735 ... G0SCE2 37921038
    861677 8pv8:LT (2.91) BS01 rna ? GO:0003735 ... G0S0Z3 37921038
    861678 8pv8:LT (2.91) BS02 rna ? GO:0003735 ... G0S0Z3 37921038
    861679 8pv8:LU (2.91) BS01 rna ? GO:0002181 ... G0SDS8 37921038
    861680 8pv8:LV (2.91) BS01 rna ? GO:0003735 ... G0SI44 37921038
    861681 8pv8:LX (2.91) BS01 rna ? GO:0003735 ... G0S507 37921038
    861682 8pv8:LX (2.91) BS02 rna ? GO:0003735 ... G0S507 37921038
    861683 8pv8:LY (2.91) BS01 rna ? GO:0003723 ... G0RYN9 37921038
    861684 8pv8:LY (2.91) BS02 rna ? GO:0003723 ... G0RYN9 37921038
    861685 8pv8:LZ (2.91) BS01 rna ? GO:0003735 ... G0RZE9 37921038
    861686 8pv8:La (2.91) BS01 rna N/A GO:0003735 ... G0SGT6 37921038
    861687 8pv8:Lb (2.91) BS01 rna ? GO:0002181 ... Q2H9W4 37921038
    861688 8pv8:Lc (2.91) BS01 rna ? GO:0003723 ... G0SEI0 37921038
    861689 8pv8:Ld (2.91) BS01 rna ? GO:0002181 ... G0SD68 37921038
    861690 8pv8:Le (2.91) BS01 rna ? GO:0003735 ... G0S6V4 37921038
    861691 8pv8:Lf (2.91) BS01 rna ? GO:0003735 ... G0SCL3 37921038
    861692 8pv8:Lg (2.91) BS01 rna ? GO:0003735 ... G0SFN0 37921038
    861693 8pv8:Lg (2.91) BS02 ZN ? GO:0003735 ... G0SFN0 37921038
    861694 8pv8:Lh (2.91) BS01 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    861695 8pv8:Lh (2.91) BS02 rna 2.4.99.18 GO:0003735 ... G0S0D7 37921038
    861696 8pv8:Li (2.91) BS01 rna ? GO:0003735 ... G0SBN1 37921038
    861697 8pv8:Lj (2.91) BS01 rna ? GO:0003723 ... G0S101 37921038
    861698 8pv8:Lj (2.91) BS02 rna ? GO:0003723 ... G0S101 37921038
    861699 8pv8:Lj (2.91) BS03 ZN ? GO:0003723 ... G0S101 37921038
    861700 8pv8:Lk (2.91) BS01 rna N/A GO:0003735 ... G0SG89 37921038
    861701 8pv8:Ll (2.91) BS01 rna ? GO:0003735 ... Q2H9R2 37921038
    861702 8pv8:Ll (2.91) BS02 rna ? GO:0003735 ... Q2H9R2 37921038
    861703 8pv8:Lp (2.91) BS01 rna ? GO:0003735 ... G0S6B0 37921038
    861704 8pv8:Lp (2.91) BS02 ZN ? GO:0003735 ... G0S6B0 37921038
    861705 8pv8:Lq (2.91) BS01 rna ? GO:0003735 ... G0SHJ6 37921038
    861706 8pv8:Lt (2.91) BS01 rna ? GO:0000055 ... G0S4Z9 37921038
    861707 8pva:0 (4.5) BS01 rna ? GO:0000027 ... P0A7N9 38011573
    861708 8pva:1 (4.5) BS01 rna ? GO:0002181 ... P0A7P5 38011573
    861709 8pva:2 (4.5) BS01 rna ? GO:0002181 ... P0A7Q1 38011573
    861710 8pva:3 (4.5) BS01 rna ? GO:0002181 ... P0A7Q6 38011573
    861711 8pva:3 (4.5) BS02 ZN ? GO:0002181 ... P0A7Q6 38011573
    861712 8pva:4 (4.5) BS01 rna ? GO:0002181 ... P0A7M9 38011573
    861713 8pva:4 (4.5) BS02 ZN ? GO:0002181 ... P0A7M9 38011573
    861714 8pva:B (4.5) BS01 rna ? GO:0000028 ... P0A7V0 38011573
    861715 8pva:C (4.5) BS01 rna ? GO:0000028 ... P0A7V3 38011573
    861716 8pva:D (4.5) BS01 rna ? GO:0000028 ... P0A7V8 38011573
    861717 8pva:E (4.5) BS01 rna ? GO:0000028 ... P0A7W1 38011573
    861718 8pva:F (4.5) BS01 rna ? GO:0002181 ... P02358 38011573
    861719 8pva:G (4.5) BS01 rna ? GO:0000028 ... P02359 38011573
    861720 8pva:G (4.5) BS02 rna ? GO:0000028 ... P02359 38011573
    861721 8pva:H (4.5) BS01 rna ? GO:0000028 ... P0A7W7 38011573
    861722 8pva:I (4.5) BS01 rna ? GO:0002181 ... P0A7X3 38011573
    861723 8pva:I (4.5) BS02 rna ? GO:0002181 ... P0A7X3 38011573
    861724 8pva:J (4.5) BS01 rna ? GO:0000049 ... P0A7R5 38011573
    861725 8pva:K (4.5) BS01 rna ? GO:0002181 ... P0A7R9 38011573
    861726 8pva:L (4.5) BS01 rna ? GO:0000049 ... P0A7S3 38011573
    861727 8pva:M (4.5) BS01 rna ? GO:0000049 ... P0A7S9 38011573
    861728 8pva:M (4.5) BS02 rna ? GO:0000049 ... P0A7S9 38011573
    861729 8pva:N (4.5) BS01 rna ? GO:0000028 ... P0AG59 38011573
    861730 8pva:O (4.5) BS01 rna ? GO:0000028 ... P0ADZ4 38011573
    861731 8pva:O (4.5) BS02 rna ? GO:0000028 ... P0ADZ4 38011573
    861732 8pva:P (4.5) BS01 rna ? GO:0000028 ... P0A7T3 38011573
    861733 8pva:Q (4.5) BS01 rna ? GO:0000028 ... P0AG63 38011573
    861734 8pva:R (4.5) BS01 rna ? GO:0002181 ... P0A7T7 38011573
    861735 8pva:S (4.5) BS01 rna ? GO:0002181 ... P0A7U3 38011573
    861736 8pva:T (4.5) BS01 rna ? GO:0000028 ... P0A7U7 38011573
    861737 8pva:U (4.5) BS01 rna ? GO:0000028 ... P68679 38011573
    861738 8pva:c (4.5) BS01 rna ? GO:0000027 ... P60422 38011573
    861739 8pva:d (4.5) BS01 rna ? GO:0000027 ... P60438 38011573
    861740 8pva:e (4.5) BS01 rna ? GO:0001070 ... P60723 38011573
    861741 8pva:f (4.5) BS01 rna ? GO:0000027 ... P62399 38011573
    861742 8pva:f (4.5) BS02 rna ? GO:0000027 ... P62399 38011573
    861743 8pva:f (4.5) BS03 rna ? GO:0000027 ... P62399 38011573
    861744 8pva:g (4.5) BS01 rna ? GO:0000027 ... P0AG55 38011573
    861745 8pva:h (4.5) BS01 rna ? GO:0002181 ... P0A7R1 38011573
    861746 8pva:i (4.5) BS01 rna ? GO:0002181 ... P0AA10 38011573
    861747 8pva:j (4.5) BS01 rna ? GO:0002181 ... P0ADY3 38011573
    861748 8pva:j (4.5) BS02 rna ? GO:0002181 ... P0ADY3 38011573
    861749 8pva:k (4.5) BS01 rna ? GO:0002181 ... P02413 38011573
    861750 8pva:l (4.5) BS01 rna ? GO:0000027 ... P0ADY7 38011573
    861751 8pva:l (4.5) BS02 rna ? GO:0000027 ... P0ADY7 38011573
    861752 8pva:l (4.5) BS03 rna ? GO:0000027 ... P0ADY7 38011573
    861753 8pva:m (4.5) BS01 rna ? GO:0000027 ... P0AG44 38011573
    861754 8pva:n (4.5) BS01 rna ? GO:0002181 ... P0C018 38011573
    861755 8pva:n (4.5) BS02 rna ? GO:0002181 ... P0C018 38011573
    861756 8pva:o (4.5) BS01 rna ? GO:0000027 ... P0A7K6 38011573
    861757 8pva:o (4.5) BS02 rna ? GO:0000027 ... P0A7K6 38011573
    861758 8pva:p (4.5) BS01 rna ? GO:0000027 ... P0A7L3 38011573
    861759 8pva:q (4.5) BS01 rna ? GO:0002181 ... P0AG48 38011573
    861760 8pva:r (4.5) BS01 rna ? GO:0002181 ... P61175 38011573
    861761 8pva:s (4.5) BS01 rna ? GO:0000027 ... P0ADZ0 38011573
    861762 8pva:t (4.5) BS01 rna ? GO:0000027 ... P60624 38011573
    861763 8pva:u (4.5) BS01 rna ? GO:0000027 ... P68919 38011573
    861764 8pva:v (4.5) BS01 rna ? GO:0000027 ... P0A7L8 38011573
    861765 8pva:v (4.5) BS02 rna ? GO:0000027 ... P0A7L8 38011573
    861766 8pva:w (4.5) BS01 rna ? GO:0000027 ... P0A7M2 38011573
    861767 8pva:x (4.5) BS01 rna ? GO:0000027 ... P0A7M6 38011573
    861768 8pva:y (4.5) BS01 rna ? GO:0000027 ... P0AG51 38011573
    861769 8pva:y (4.5) BS02 rna ? GO:0000027 ... P0AG51 38011573
    861770 8pva:z (4.5) BS01 rna ? GO:0000027 ... P0A7N4 38011573
    861771 8pvb:A (3.6) BS01 HSM ? GO:0004888 ... P28472 38011573
    861772 8pvb:A (3.6) BS02 V8D ? GO:0004888 ... P28472 38011573
    861773 8pvc:A (2.6) BS01 ZN 1.16.3.1 GO:0004322 ... P09528 38011573
    861774 8pvd:A (3.4) BS01 NDP 1.11.1.6 GO:0000302 ... P04040 38011573
    861775 8pvd:A (3.4) BS02 HEM 1.11.1.6 GO:0000302 ... P04040 38011573
    861776 8pvf:A (2.9) BS01 NAD 1.2.1.12 GO:0004365 ... Q7YYQ9 38011573
    861777 8pvk:CB (2.55) BS01 rna ? N/A G0S7X0 37921038
    861778 8pvk:CF (2.55) BS01 rna ? GO:0000027 ... G0S616 37921038
    861779 8pvk:CH (2.55) BS01 rna ? GO:0005525 ... G0S8F1 37921038
    861780 8pvk:CH (2.55) BS02 rna ? GO:0005525 ... G0S8F1 37921038
    861781 8pvk:CH (2.55) BS03 GTP ? GO:0005525 ... G0S8F1 37921038
    861782 8pvk:CH (2.55) BS04 MG ? GO:0005525 ... G0S8F1 37921038
    861783 8pvk:CI (2.55) BS01 rna ? GO:0003676 ... G0S1H0 37921038
    861784 8pvk:CJ (2.55) BS01 rna ? GO:0000463 ... G0SHX6 37921038
    861785 8pvk:CJ (2.55) BS02 rna ? GO:0000463 ... G0SHX6 37921038
    861786 8pvk:CK (2.55) BS01 rna ? GO:0005730 ... G0S081 37921038
    861787 8pvk:CL (2.55) BS01 rna ? GO:0005525 ... G0SEW3 37921038
    861788 8pvk:CM (2.55) BS01 rna ? GO:0000463 ... G0SFL0 37921038
    861789 8pvk:CM (2.55) BS02 rna ? GO:0000463 ... G0SFL0 37921038
    861790 8pvk:CN (2.55) BS01 rna ? GO:0000054 ... G0S683 37921038
    861791 8pvk:CO (2.55) BS01 rna ? GO:0030687 ... G0SHK0 37921038
    861792 8pvk:CQ (2.55) BS01 rna ? GO:0003735 ... G0S497 37921038
    861793 8pvk:CQ (2.55) BS02 ZN ? GO:0003735 ... G0S497 37921038
    861794 8pvk:Cb (2.55) BS01 rna ? GO:0003676 ... G0SB32 37921038
    861795 8pvk:Cb (2.55) BS02 ZN ? GO:0003676 ... G0SB32 37921038
    861796 8pvk:Cd (2.55) BS01 rna ? GO:0005525 ... G0SBX1 37921038
    861797 8pvk:Cd (2.55) BS02 GTP ? GO:0005525 ... G0SBX1 37921038
    861798 8pvk:Cd (2.55) BS03 MG ? GO:0005525 ... G0SBX1 37921038
    861799 8pvk:Cd (2.55) BS04 MG ? GO:0005525 ... G0SBX1 37921038
    861800 8pvk:Ce (2.55) BS01 rna ? GO:0000027 ... G0S495 37921038

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).