SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    86201 2gmn:A (1.4) BS02 ZN 3.5.2.6 GO:0008800 ... Q89GW5 16723554
    86202 2gmn:A (1.4) BS03 ZN 3.5.2.6 GO:0008800 ... Q89GW5 16723554
    86203 2gmn:B (1.4) BS01 ZN 3.5.2.6 GO:0008800 ... Q89GW5 16723554
    86204 2gmn:B (1.4) BS02 ZN 3.5.2.6 GO:0008800 ... Q89GW5 16723554
    86205 2gmn:B (1.4) BS03 ZN 3.5.2.6 GO:0008800 ... Q89GW5 16723554
    86206 2gmp:A (2.5) BS01 MAN ? GO:0030246 ... Q8GSD2 16824540
    86207 2gmp:B (2.5) BS01 MAN ? GO:0030246 ... Q8GSD2 16824540
    86208 2gmr:L (2.5) BS01 BCL ? GO:0009772 ... P0C0Y8 17105193
    86209 2gmr:L (2.5) BS02 BCL ? GO:0009772 ... P0C0Y8 17105193
    86210 2gmr:L (2.5) BS03 BCL ? GO:0009772 ... P0C0Y8 17105193
    86211 2gmr:L (2.5) BS04 BPH ? GO:0009772 ... P0C0Y8 17105193
    86212 2gmr:L (2.5) BS05 U10 ? GO:0009772 ... P0C0Y8 17105193
    86213 2gmr:L (2.5) BS06 FE2 ? GO:0009772 ... P0C0Y8 17105193
    86214 2gmr:L (2.5) BS07 BPH ? GO:0009772 ... P0C0Y8 17105193
    86215 2gmr:L (2.5) BS08 U10 ? GO:0009772 ... P0C0Y8 17105193
    86216 2gmr:M (2.5) BS01 BCL ? GO:0009772 ... P0C0Y9 17105193
    86217 2gmr:M (2.5) BS02 BCL ? GO:0009772 ... P0C0Y9 17105193
    86218 2gmr:M (2.5) BS03 BPH ? GO:0009772 ... P0C0Y9 17105193
    86219 2gmr:M (2.5) BS04 FE2 ? GO:0009772 ... P0C0Y9 17105193
    86220 2gmr:M (2.5) BS05 BCL ? GO:0009772 ... P0C0Y9 17105193
    86221 2gmr:M (2.5) BS06 BPH ? GO:0009772 ... P0C0Y9 17105193
    86222 2gmr:M (2.5) BS07 U10 ? GO:0009772 ... P0C0Y9 17105193
    86223 2gmr:M (2.5) BS08 SPN ? GO:0009772 ... P0C0Y9 17105193
    86224 2gms:A (1.8) BS01 P0P 2.6.1.- GO:0000271 ... Q9F118 16943443
    86225 2gms:B (1.8) BS01 P0P 2.6.1.- GO:0000271 ... Q9F118 16943443
    86226 2gmt:B (1.8) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 7947790
    86227 2gmt:C (1.8) BS01 peptide 3.4.21.1 GO:0004252 ... P00766 7947790
    86228 2gmt:C (1.8) BS02 HIN 3.4.21.1 GO:0004252 ... P00766 7947790
    86229 2gmu:A (1.9) BS01 PDG 2.6.1.- GO:0000271 ... Q9F118 16943443
    86230 2gmu:A (1.9) BS02 PDG 2.6.1.- GO:0000271 ... Q9F118 16943443
    86231 2gmu:B (1.9) BS01 PDG 2.6.1.- GO:0000271 ... Q9F118 16943443
    86232 2gmu:B (1.9) BS02 PDG 2.6.1.- GO:0000271 ... Q9F118 16943443
    86233 2gmv:A (2.3) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P35558 17532214
    86234 2gmv:A (2.3) BS02 PEP 2.7.11.-
    4.1.1.32
    GO:0000287 ... P35558 17532214
    86235 2gmv:A (2.3) BS03 UN8 2.7.11.-
    4.1.1.32
    GO:0000287 ... P35558 17532214 MOAD: ic50=0.63uM
    BindingDB: IC50=630nM
    86236 2gmv:B (2.3) BS01 MN 2.7.11.-
    4.1.1.32
    GO:0000287 ... P35558 17532214
    86237 2gmv:B (2.3) BS02 PEP 2.7.11.-
    4.1.1.32
    GO:0000287 ... P35558 17532214
    86238 2gmw:A (1.5) BS01 ZN 3.1.3.82 GO:0000287 ... P63228 20050699
    86239 2gmw:B (1.5) BS01 ZN 3.1.3.82 GO:0000287 ... P63228 20050699
    86240 2gmx:A (3.5) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 16759099
    86241 2gmx:A (3.5) BS02 877 2.7.11.24 GO:0004672 ... P45983 16759099 BindingDB: IC50=77nM
    86242 2gmx:B (3.5) BS01 peptide 2.7.11.24 GO:0004672 ... P45983 16759099
    86243 2gmx:B (3.5) BS02 877 2.7.11.24 GO:0004672 ... P45983 16759099 BindingDB: IC50=77nM
    86244 2gn2:A (2.5) BS01 C5P 4.3.1.17
    4.3.1.19
    GO:0003941 ... P11954 17046821
    86245 2gn3:A (1.97) BS01 MAN ? GO:0030246 ... Q8GSD2 16824540
    86246 2gn3:B (1.97) BS01 MMA ? GO:0030246 ... Q8GSD2 16824540
    86247 2gn4:A (1.9) BS01 NDP 4.2.1.115 N/A O25511 16651261
    86248 2gn4:A (1.9) BS02 UD1 4.2.1.115 N/A O25511 16651261
    86249 2gn4:B (1.9) BS01 NDP 4.2.1.115 N/A O25511 16651261
    86250 2gn4:B (1.9) BS02 UD1 4.2.1.115 N/A O25511 16651261
    86251 2gn6:A (2.7) BS01 NAP 4.2.1.115 N/A O25511 16651261
    86252 2gn6:A (2.7) BS02 UD1 4.2.1.115 N/A O25511 16651261
    86253 2gn6:B (2.7) BS01 NAP 4.2.1.115 N/A O25511 16651261
    86254 2gn6:B (2.7) BS02 UD1 4.2.1.115 N/A O25511 16651261
    86255 2gn7:A (2.9) BS01 MAN ? GO:0030246 ... Q8GSD2 16824540
    86256 2gn7:B (2.9) BS01 MAN ? GO:0030246 ... Q8GSD2 16824540
    86257 2gn8:A (2.1) BS01 NAP 4.2.1.115 N/A O25511 16651261
    86258 2gn8:A (2.1) BS02 UDP 4.2.1.115 N/A O25511 16651261
    86259 2gn8:B (2.1) BS01 NAP 4.2.1.115 N/A O25511 16651261
    86260 2gn8:B (2.1) BS02 UDP 4.2.1.115 N/A O25511 16651261
    86261 2gn9:A (2.8) BS01 NAP 4.2.1.115 N/A O25511 16651261
    86262 2gn9:A (2.8) BS02 UPG 4.2.1.115 N/A O25511 16651261
    86263 2gn9:B (2.8) BS01 NAP 4.2.1.115 N/A O25511 16651261
    86264 2gn9:B (2.8) BS02 UPG 4.2.1.115 N/A O25511 16651261
    86265 2gna:A (2.6) BS01 GDU 4.2.1.115 N/A O25511 16651261
    86266 2gna:A (2.6) BS02 NAP 4.2.1.115 N/A O25511 16651261
    86267 2gna:B (2.6) BS01 GDU 4.2.1.115 N/A O25511 16651261
    86268 2gna:B (2.6) BS02 NAP 4.2.1.115 N/A O25511 16651261
    86269 2gnb:B (2.27) BS01 MAN ? GO:0030246 ... Q8GSD2 16824540
    86270 2gnd:A (2.25) BS01 MMA ? GO:0030246 ... Q8GSD2 16824540
    86271 2gnd:A (2.25) BS02 MAN ? GO:0030246 ... Q8GSD2 16824540
    86272 2gnd:A (2.25) BS03 MN ? GO:0030246 ... Q8GSD2 16824540
    86273 2gnd:A (2.25) BS04 CA ? GO:0030246 ... Q8GSD2 16824540
    86274 2gnd:B (2.25) BS01 MAN ? GO:0030246 ... Q8GSD2 16824540
    86275 2gnd:B (2.25) BS02 CA ? GO:0030246 ... Q8GSD2 16824540
    86276 2gnd:B (2.25) BS03 MN ? GO:0030246 ... Q8GSD2 16824540
    86277 2gnf:A (2.28) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 16699172
    86278 2gnf:A (2.28) BS02 Y27 2.7.11.11 GO:0000287 ... P00517 16699172 MOAD: ic50=6uM
    BindingDB: IC50=42000nM
    86279 2gng:A (1.87) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 16699172
    86280 2gnh:A (2.05) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 16699172
    86281 2gnh:A (2.05) BS02 H52 2.7.11.11 GO:0000287 ... P00517 16699172 MOAD: ic50=149nM
    BindingDB: IC50=394nM
    86282 2gnh:A (2.05) BS03 H52 2.7.11.11 GO:0000287 ... P00517 16699172 MOAD: ic50=149nM
    BindingDB: IC50=394nM
    86283 2gni:A (2.27) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 16699172
    86284 2gni:A (2.27) BS02 M77 2.7.11.11 GO:0000287 ... P00517 16699172 MOAD: ic50=2280nM
    BindingDB: IC50=1494nM
    86285 2gnj:A (2.28) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 16699172
    86286 2gnj:A (2.28) BS02 Y27 2.7.11.11 GO:0000287 ... P00517 16699172 MOAD: Ki=6uM
    BindingDB: IC50=42000nM
    86287 2gnk:A (2.0) BS01 ATP ? GO:0005515 ... P0AC55 9733647
    86288 2gnl:A (2.6) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 16699172
    86289 2gnl:A (2.6) BS02 H52 2.7.11.11 GO:0000287 ... P00517 16699172 BindingDB: IC50=394nM
    86290 2gnm:A (1.95) BS01 MAN ? GO:0030246 ... Q8GSD2 16824540
    86291 2gnm:A (1.95) BS02 CA ? GO:0030246 ... Q8GSD2 16824540
    86292 2gnm:B (1.95) BS01 CA ? GO:0030246 ... Q8GSD2 16824540
    86293 2gnm:B (1.95) BS02 MN ? GO:0030246 ... Q8GSD2 16824540
    86294 2gns:A (2.3) BS01 peptide 3.1.1.4 GO:0004623 ... P59071 N/A
    86295 2gnt:A (2.02) BS01 CA ? GO:0030246 ... Q8GSD2 16824540
    86296 2gnt:A (2.02) BS02 CA ? GO:0030246 ... Q8GSD2 16824540
    86297 2gnt:B (2.02) BS01 CA ? GO:0030246 ... Q8GSD2 16824540
    86298 2gnt:B (2.02) BS02 CA ? GO:0030246 ... Q8GSD2 16824540
    86299 2gnu:L (2.2) BS01 BCL ? GO:0009772 ... P0C0Y8 17005199
    86300 2gnu:L (2.2) BS02 BCL ? GO:0009772 ... P0C0Y8 17005199
    86301 2gnu:L (2.2) BS03 U10 ? GO:0009772 ... P0C0Y8 17005199
    86302 2gnu:L (2.2) BS04 FE2 ? GO:0009772 ... P0C0Y8 17005199
    86303 2gnu:L (2.2) BS05 BPH ? GO:0009772 ... P0C0Y8 17005199
    86304 2gnu:L (2.2) BS06 BCL ? GO:0009772 ... P0C0Y8 17005199
    86305 2gnu:L (2.2) BS07 BPH ? GO:0009772 ... P0C0Y8 17005199
    86306 2gnu:L (2.2) BS08 U10 ? GO:0009772 ... P0C0Y8 17005199
    86307 2gnu:M (2.2) BS01 BCL ? GO:0009772 ... P0C0Y9 17005199
    86308 2gnu:M (2.2) BS02 FE2 ? GO:0009772 ... P0C0Y9 17005199
    86309 2gnu:M (2.2) BS03 BPH ? GO:0009772 ... P0C0Y9 17005199
    86310 2gnu:M (2.2) BS04 BCL ? GO:0009772 ... P0C0Y9 17005199
    86311 2gnu:M (2.2) BS05 BCL ? GO:0009772 ... P0C0Y9 17005199
    86312 2gnu:M (2.2) BS06 BPH ? GO:0009772 ... P0C0Y9 17005199
    86313 2gnu:M (2.2) BS07 U10 ? GO:0009772 ... P0C0Y9 17005199
    86314 2gnv:A (2.3) BS01 HEM 1.7.2.- GO:0005634 ... O04986 16893175
    86315 2gnv:B (2.3) BS01 HEM 1.7.2.- GO:0005634 ... O04986 16893175
    86316 2gnw:A (2.4) BS01 HEM 1.7.2.- GO:0005634 ... O04986 16893175
    86317 2gnw:B (2.4) BS01 HEM 1.7.2.- GO:0005634 ... O04986 16893175
    86318 2go3:A (2.0) BS01 ZN 3.5.1.108 GO:0005737 ... O67648 16800620
    86319 2go3:A (2.0) BS02 ZN 3.5.1.108 GO:0005737 ... O67648 16800620
    86320 2go3:A (2.0) BS03 IMD 3.5.1.108 GO:0005737 ... O67648 16800620
    86321 2go3:B (2.0) BS01 ZN 3.5.1.108 GO:0005737 ... O67648 16800620
    86322 2go3:B (2.0) BS02 ZN 3.5.1.108 GO:0005737 ... O67648 16800620
    86323 2go3:B (2.0) BS03 ZN 3.5.1.108 GO:0005737 ... O67648 16800620
    86324 2go3:B (2.0) BS04 IMD 3.5.1.108 GO:0005737 ... O67648 16800620
    86325 2go3:B (2.0) BS05 IMD 3.5.1.108 GO:0005737 ... O67648 16800620
    86326 2go4:A (2.7) BS01 ZN 3.5.1.108 GO:0005737 ... O67648 16800620
    86327 2go4:A (2.7) BS02 ZN 3.5.1.108 GO:0005737 ... O67648 16800620
    86328 2go4:A (2.7) BS03 ZN 3.5.1.108 GO:0005737 ... O67648 16800620
    86329 2go4:A (2.7) BS04 TUX 3.5.1.108 GO:0005737 ... O67648 16800620
    86330 2go4:B (2.7) BS01 ZN 3.5.1.108 GO:0005737 ... O67648 16800620
    86331 2go4:B (2.7) BS02 ZN 3.5.1.108 GO:0005737 ... O67648 16800620
    86332 2go4:B (2.7) BS03 TUX 3.5.1.108 GO:0005737 ... O67648 16800620
    86333 2go5:1 (7.4) BS01 rna ? GO:0003924 ... P08240 16675701
    86334 2go5:6 (7.4) BS01 rna ? GO:0003735 ... Q5XLD9 16675701
    86335 2go5:B (7.4) BS01 rna ? GO:0006614 ... Q5RBR1 16675701
    86336 2go5:W (7.4) BS01 rna 3.6.5.4 GO:0003924 ... P61010 16675701
    86337 2go7:A (2.1) BS01 MG ? GO:0003824 ... A0A0H2URV7 N/A
    86338 2go7:B (2.1) BS01 MG ? GO:0003824 ... A0A0H2URV7 N/A
    86339 2go7:C (2.1) BS01 MG ? GO:0003824 ... A0A0H2URV7 N/A
    86340 2go7:D (2.1) BS01 MG ? GO:0003824 ... A0A0H2URV7 N/A
    86341 2goj:A (2.0) BS01 FE2 1.15.1.1 GO:0004784 ... Q27740 19384994
    86342 2goj:B (2.0) BS01 FE2 1.15.1.1 GO:0004784 ... Q27740 19384994
    86343 2gok:A (1.87) BS01 FE 3.5.2.7 GO:0005506 ... Q8U8Z6 17640072
    86344 2gok:B (1.87) BS01 FE 3.5.2.7 GO:0005506 ... Q8U8Z6 17640072
    86345 2gou:A (1.4) BS01 FMN ? GO:0005829 ... Q8EEC8 16857682
    86346 2goy:A (2.7) BS01 SF4 1.8.4.10 GO:0000103 ... O05927 17010373
    86347 2goy:B (2.7) BS01 SF4 1.8.4.10 GO:0000103 ... O05927 17010373
    86348 2goy:B (2.7) BS02 ADX 1.8.4.10 GO:0000103 ... O05927 17010373
    86349 2goy:C (2.7) BS01 SF4 1.8.4.10 GO:0000103 ... O05927 17010373
    86350 2goy:D (2.7) BS01 SF4 1.8.4.10 GO:0000103 ... O05927 17010373
    86351 2goy:D (2.7) BS02 ADX 1.8.4.10 GO:0000103 ... O05927 17010373
    86352 2goy:E (2.7) BS01 SF4 1.8.4.10 GO:0000103 ... O05927 17010373
    86353 2goy:F (2.7) BS01 SF4 1.8.4.10 GO:0000103 ... O05927 17010373
    86354 2goy:F (2.7) BS02 ADX 1.8.4.10 GO:0000103 ... O05927 17010373
    86355 2goy:G (2.7) BS01 SF4 1.8.4.10 GO:0000103 ... O05927 17010373
    86356 2goy:H (2.7) BS01 SF4 1.8.4.10 GO:0000103 ... O05927 17010373
    86357 2goy:H (2.7) BS02 ADX 1.8.4.10 GO:0000103 ... O05927 17010373
    86358 2gp3:A (2.35) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 16677698
    86359 2gp3:A (2.35) BS02 FE2 1.14.11.66
    1.14.11.69
    N/A O75164 16677698
    86360 2gp3:B (2.35) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 16677698
    86361 2gp3:B (2.35) BS02 FE2 1.14.11.66
    1.14.11.69
    N/A O75164 16677698
    86362 2gp5:A (2.28) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 16677698
    86363 2gp5:A (2.28) BS02 FE2 1.14.11.66
    1.14.11.69
    N/A O75164 16677698
    86364 2gp5:A (2.28) BS03 AKG 1.14.11.66
    1.14.11.69
    N/A O75164 16677698
    86365 2gp5:B (2.28) BS01 ZN 1.14.11.66
    1.14.11.69
    N/A O75164 16677698
    86366 2gp5:B (2.28) BS02 FE2 1.14.11.66
    1.14.11.69
    N/A O75164 16677698
    86367 2gp5:B (2.28) BS03 AKG 1.14.11.66
    1.14.11.69
    N/A O75164 16677698
    86368 2gp7:A (2.45) BS01 CA ? N/A P62508 16990259
    86369 2gpa:A (2.0) BS01 GLC 2.4.1.1 GO:0004645 ... P00489 10548038
    86370 2gpa:A (2.0) BS02 PLP 2.4.1.1 GO:0004645 ... P00489 10548038
    86371 2gpb:A (2.3) BS01 GLC 2.4.1.1 GO:0004645 ... P00489 2125493 MOAD: Ki=2mM
    86372 2gpb:A (2.3) BS02 PLP 2.4.1.1 GO:0004645 ... P00489 2125493
    86373 2gpc:A (1.9) BS01 FE2 1.15.1.1 GO:0004784 ... Q4DI29 19384994
    86374 2gpc:B (1.9) BS01 FE2 1.15.1.1 GO:0004784 ... Q4DI29 19384994
    86375 2gph:A (1.9) BS01 peptide 2.7.11.24 GO:0000165 ... P63086 16765894
    86376 2gpj:A (2.2) BS01 FAD ? GO:0016491 ... A4Y1H9 N/A
    86377 2gpl:H (2.81) BS01 BIQ 3.4.25.1 GO:0004298 ... P25043 16793518
    86378 2gpl:I (2.81) BS01 BIQ 3.4.25.1 GO:0005515 ... P25451 16793518
    86379 2gpl:V (2.81) BS01 BIQ 3.4.25.1 GO:0004298 ... P25043 16793518
    86380 2gpl:W (2.81) BS01 BIQ 3.4.25.1 GO:0005515 ... P25451 16793518
    86381 2gpo:A (1.95) BS01 peptide ? N/A P62508 16990259
    86382 2gpp:A (2.6) BS01 peptide ? N/A P62508 16990259
    86383 2gpp:A (2.6) BS02 1BA ? N/A P62508 16990259
    86384 2gpp:B (2.6) BS01 peptide ? N/A P62508 16990259
    86385 2gpt:A (1.95) BS01 SKM 1.1.1.25
    4.2.1.10
    GO:0003855 ... Q9SQT8 16784230
    86386 2gpu:A (1.7) BS01 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    86387 2gpv:A (2.85) BS01 peptide ? N/A P62508 16990259
    86388 2gpv:A (2.85) BS02 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    86389 2gpv:B (2.85) BS01 peptide ? N/A P62508 16990259
    86390 2gpv:B (2.85) BS02 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    86391 2gpv:C (2.85) BS01 peptide ? N/A P62508 16990259
    86392 2gpv:C (2.85) BS02 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    86393 2gpv:D (2.85) BS01 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    86394 2gpv:E (2.85) BS01 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    86395 2gpv:F (2.85) BS01 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    86396 2gpy:A (1.9) BS01 ZN 2.1.1.- GO:0000287 ... Q9KDE1 N/A
    86397 2gpy:B (1.9) BS01 MG 2.1.1.- GO:0000287 ... Q9KDE1 N/A
    86398 2gpy:B (1.9) BS02 ZN 2.1.1.- GO:0000287 ... Q9KDE1 N/A
    86399 2gpy:B (1.9) BS03 ZN 2.1.1.- GO:0000287 ... Q9KDE1 N/A
    86400 2gpy:B (1.9) BS04 ZN 2.1.1.- GO:0000287 ... Q9KDE1 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).