SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    863801 8q7u:A (1.6) BS01 MFU N/A N/A Q7N8J0 40459235
    863802 8q7u:A (1.6) BS02 MFU N/A N/A Q7N8J0 40459235
    863803 8q7v:A (3.8) BS01 rna ? GO:0000244 ... Q6P2Q9 38467876
    863804 8q7v:A (3.8) BS02 peptide ? GO:0000244 ... Q6P2Q9 38467876
    863805 8q7v:A (3.8) BS03 peptide ? GO:0000244 ... Q6P2Q9 38467876
    863806 8q7v:C (3.8) BS01 GTP ? GO:0000244 ... Q15029 38467876
    863807 8q7v:D (3.8) BS01 rna ? GO:0000244 ... Q96DI7 38467876
    863808 8q7v:a (3.8) BS01 rna ? GO:0000243 ... P62314 38467876
    863809 8q7v:b (3.8) BS01 rna ? GO:0000244 ... P14678 38467876
    863810 8q7v:c (3.8) BS01 rna ? GO:0000244 ... P62316 38467876
    863811 8q7v:d (3.8) BS01 rna ? GO:0000243 ... P62318 38467876
    863812 8q7v:e (3.8) BS01 rna ? GO:0000244 ... P62304 38467876
    863813 8q7v:f (3.8) BS01 rna ? GO:0000244 ... P62306 38467876
    863814 8q7v:g (3.8) BS01 rna ? GO:0000244 ... P62308 38467876
    863815 8q7w:A (3.9) BS01 rna ? GO:0000244 ... Q6P2Q9 38467876
    863816 8q7w:A (3.9) BS02 peptide ? GO:0000244 ... Q6P2Q9 38467876
    863817 8q7w:C (3.9) BS01 GTP ? GO:0000244 ... Q15029 38467876
    863818 8q7w:a (3.9) BS01 rna ? GO:0000243 ... P62314 38467876
    863819 8q7w:b (3.9) BS01 rna ? GO:0000244 ... P14678 38467876
    863820 8q7w:c (3.9) BS01 rna ? GO:0000244 ... P62316 38467876
    863821 8q7w:d (3.9) BS01 rna ? GO:0000243 ... P62318 38467876
    863822 8q7w:e (3.9) BS01 rna ? GO:0000244 ... P62304 38467876
    863823 8q7w:f (3.9) BS01 rna ? GO:0000244 ... P62306 38467876
    863824 8q7w:g (3.9) BS01 rna ? GO:0000244 ... P62308 38467876
    863825 8q7x:A (4.6) BS01 rna ? GO:0000244 ... Q6P2Q9 38467876
    863826 8q7x:C (4.6) BS01 GTP ? GO:0000244 ... Q15029 38467876
    863827 8q7x:a (4.6) BS01 rna ? GO:0000243 ... P62314 38467876
    863828 8q7x:b (4.6) BS01 rna ? GO:0000244 ... P14678 38467876
    863829 8q7x:c (4.6) BS01 rna ? GO:0000244 ... P62316 38467876
    863830 8q7x:d (4.6) BS01 rna ? GO:0000243 ... P62318 38467876
    863831 8q7x:e (4.6) BS01 rna ? GO:0000244 ... P62304 38467876
    863832 8q7x:f (4.6) BS01 rna ? GO:0000244 ... P62306 38467876
    863833 8q7x:g (4.6) BS01 rna ? GO:0000244 ... P62308 38467876
    863834 8q7z:AA (2.5) BS01 rna N/A GO:0003735 ... A0A3Q2TV39 38395592
    863835 8q7z:AB (2.5) BS01 rna N/A GO:0000028 ... A0A3Q2U825 38395592
    863836 8q7z:AC (2.5) BS01 rna N/A GO:0003735 ... P79781 38395592
    863837 8q7z:AD (2.5) BS01 rna N/A GO:0003735 ... N/A 38395592
    863838 8q7z:AE (2.5) BS01 rna N/A GO:0003735 ... Q5ZM66 38395592
    863839 8q7z:AE (2.5) BS02 ZN N/A GO:0003735 ... Q5ZM66 38395592
    863840 8q7z:AF (2.5) BS01 rna N/A GO:0005080 ... P63247 38395592
    863841 8q7z:AG (2.5) BS01 rna N/A GO:0002181 ... A0A8V0Z8V3 38395592
    863842 8q7z:AG (2.5) BS02 ZN N/A GO:0002181 ... A0A8V0Z8V3 38395592
    863843 8q7z:AZ (2.5) BS01 rna N/A GO:0000028 ... P50890 38395592
    863844 8q7z:Aa (2.5) BS01 rna N/A GO:0003735 ... N/A 38395592
    863845 8q7z:Ab (2.5) BS01 rna N/A GO:0003723 ... A0A8V0Z891 38395592
    863846 8q7z:Ac (2.5) BS01 rna N/A GO:0003723 ... F1NPA9 38395592
    863847 8q7z:Ad (2.5) BS01 rna N/A GO:0003723 ... P47836 38395592
    863848 8q7z:Ae (2.5) BS01 rna N/A GO:0003723 ... G1TFM5 38395592
    863849 8q7z:Ae (2.5) BS02 rna N/A GO:0003723 ... G1TFM5 38395592
    863850 8q7z:Af (2.5) BS01 rna N/A GO:0002181 ... P47838 38395592
    863851 8q7z:Ag (2.5) BS01 rna N/A GO:0003730 ... F1NN16 38395592
    863852 8q7z:Ah (2.5) BS01 rna N/A GO:0003735 ... F1NB02 38395592
    863853 8q7z:Ah (2.5) BS02 rna N/A GO:0003735 ... F1NB02 38395592
    863854 8q7z:Ai (2.5) BS01 rna N/A GO:0003723 ... B7NZS8 38395592
    863855 8q7z:Aj (2.5) BS01 rna N/A GO:0003723 ... E1C4N0 38395592
    863856 8q7z:Ak (2.5) BS01 rna N/A GO:0003735 ... Q98TH5 38395592
    863857 8q7z:Ak (2.5) BS02 MG N/A GO:0003735 ... Q98TH5 38395592
    863858 8q7z:Al (2.5) BS01 rna N/A GO:0003735 ... P84175 38395592
    863859 8q7z:Am (2.5) BS01 rna N/A GO:0000462 ... Q6ITC7 38395592
    863860 8q7z:An (2.5) BS01 rna N/A GO:0000028 ... Q5ZHW8 38395592
    863861 8q7z:An (2.5) BS02 MG N/A GO:0000028 ... Q5ZHW8 38395592
    863862 8q7z:Ao (2.5) BS01 rna N/A GO:0003723 ... P62846 38395592
    863863 8q7z:Ap (2.5) BS01 rna N/A GO:0000462 ... R4GGJ0 38395592
    863864 8q7z:Aq (2.5) BS01 rna N/A GO:0003735 ... P08636 38395592
    863865 8q7z:Ar (2.5) BS01 rna N/A GO:0003676 ... G1TPG3 38395592
    863866 8q7z:As (2.5) BS01 rna N/A GO:0003735 ... N/A 38395592
    863867 8q7z:At (2.5) BS01 rna N/A GO:0003723 ... F1NH93 38395592
    863868 8q7z:Av (2.5) BS01 rna N/A GO:0003735 ... A0A3Q3A7P6 38395592
    863869 8q7z:Aw (2.5) BS01 rna N/A GO:0003735 ... N/A 38395592
    863870 8q7z:Ax (2.5) BS01 rna N/A GO:0003735 ... F1NF89 38395592
    863871 8q7z:Ay (2.5) BS01 rna N/A N/A A0A8V1A7V4 38395592
    863872 8q7z:BA (2.5) BS01 rna N/A GO:0002181 ... F1NIX0 38395592
    863873 8q7z:BA (2.5) BS02 rna N/A GO:0002181 ... F1NIX0 38395592
    863874 8q7z:BA (2.5) BS03 MG N/A GO:0002181 ... F1NIX0 38395592
    863875 8q7z:BA (2.5) BS04 MG N/A GO:0002181 ... F1NIX0 38395592
    863876 8q7z:BB (2.5) BS01 rna N/A GO:0003735 ... Q5ZJZ2 38395592
    863877 8q7z:BB (2.5) BS02 MG N/A GO:0003735 ... Q5ZJZ2 38395592
    863878 8q7z:BC (2.5) BS01 rna N/A GO:0003735 ... Q5ZII1 38395592
    863879 8q7z:BC (2.5) BS02 rna N/A GO:0003735 ... Q5ZII1 38395592
    863880 8q7z:BD (2.5) BS01 rna N/A GO:0000027 ... P22451 38395592
    863881 8q7z:BD (2.5) BS02 rna N/A GO:0000027 ... P22451 38395592
    863882 8q7z:BE (2.5) BS01 rna N/A GO:0003735 ... Q8UWG7 38395592
    863883 8q7z:BF (2.5) BS01 rna N/A GO:0000463 ... Q5ZJ56 38395592
    863884 8q7z:BF (2.5) BS02 rna N/A GO:0000463 ... Q5ZJ56 38395592
    863885 8q7z:BG (2.5) BS01 rna N/A GO:0000470 ... P32429 38395592
    863886 8q7z:BG (2.5) BS02 rna N/A GO:0000470 ... P32429 38395592
    863887 8q7z:BH (2.5) BS01 rna N/A GO:0002181 ... A0A1D5NVI1 38395592
    863888 8q7z:BH (2.5) BS02 MG N/A GO:0002181 ... A0A1D5NVI1 38395592
    863889 8q7z:BI (2.5) BS01 rna N/A GO:0002181 ... Q08200 38395592
    863890 8q7z:BI (2.5) BS02 rna N/A GO:0002181 ... Q08200 38395592
    863891 8q7z:BI (2.5) BS03 MG N/A GO:0002181 ... Q08200 38395592
    863892 8q7z:BJ (2.5) BS01 rna N/A GO:0003735 ... A0A1D5P3B1 38395592
    863893 8q7z:BJ (2.5) BS02 rna N/A GO:0003735 ... A0A1D5P3B1 38395592
    863894 8q7z:BL (2.5) BS01 rna N/A GO:0002181 ... P41125 38395592
    863895 8q7z:BL (2.5) BS02 rna N/A GO:0002181 ... P41125 38395592
    863896 8q7z:BM (2.5) BS01 rna N/A GO:0003723 ... Q98TF9 38395592
    863897 8q7z:BN (2.5) BS01 rna N/A GO:0002181 ... F1NQG5 38395592
    863898 8q7z:BN (2.5) BS02 rna N/A GO:0002181 ... F1NQG5 38395592
    863899 8q7z:BN (2.5) BS03 MG N/A GO:0002181 ... F1NQG5 38395592
    863900 8q7z:BO (2.5) BS01 rna N/A GO:0003735 ... N/A 38395592
    863901 8q7z:BP (2.5) BS01 rna N/A GO:0002181 ... A0A1D5PR40 38395592
    863902 8q7z:BP (2.5) BS02 rna N/A GO:0002181 ... A0A1D5PR40 38395592
    863903 8q7z:BQ (2.5) BS01 rna N/A GO:0003735 ... N/A 38395592
    863904 8q7z:BR (2.5) BS01 rna N/A GO:0003723 ... Q5ZKK8 38395592
    863905 8q7z:BR (2.5) BS02 rna N/A GO:0003723 ... Q5ZKK8 38395592
    863906 8q7z:BS (2.5) BS01 rna N/A GO:0003735 ... N/A 38395592
    863907 8q7z:BS (2.5) BS02 rna N/A GO:0003735 ... N/A 38395592
    863908 8q7z:BS (2.5) BS03 MG N/A GO:0003735 ... N/A 38395592
    863909 8q7z:BT (2.5) BS01 rna N/A GO:0001650 ... R4GIQ2 38395592
    863910 8q7z:BT (2.5) BS02 rna N/A GO:0001650 ... R4GIQ2 38395592
    863911 8q7z:BU (2.5) BS01 rna N/A GO:0002181 ... Q98TF8 38395592
    863912 8q7z:BV (2.5) BS01 rna N/A GO:0003735 ... N/A 38395592
    863913 8q7z:BW (2.5) BS01 rna N/A GO:0003735 ... A0A8V0XRE7 38395592
    863914 8q7z:BX (2.5) BS01 rna N/A GO:0003735 ... N/A 38395592
    863915 8q7z:BX (2.5) BS02 rna N/A GO:0003735 ... N/A 38395592
    863916 8q7z:BY (2.5) BS01 rna N/A GO:0003723 ... F2Z4K6 38395592
    863917 8q7z:BY (2.5) BS02 rna N/A GO:0003723 ... F2Z4K6 38395592
    863918 8q7z:BZ (2.5) BS01 rna N/A GO:0003735 ... P61355 38395592
    863919 8q7z:Ba (2.5) BS01 rna N/A GO:0003735 ... N/A 38395592
    863920 8q7z:Bb (2.5) BS01 rna N/A GO:0002181 ... A0A1L1RNZ2 38395592
    863921 8q7z:Bb (2.5) BS02 MG N/A GO:0002181 ... A0A1L1RNZ2 38395592
    863922 8q7z:Bb (2.5) BS03 MG N/A GO:0002181 ... A0A1L1RNZ2 38395592
    863923 8q7z:Bb (2.5) BS04 MG N/A GO:0002181 ... A0A1L1RNZ2 38395592
    863924 8q7z:Bc (2.5) BS01 rna N/A GO:0003723 ... P67883 38395592
    863925 8q7z:Bd (2.5) BS01 rna N/A GO:0002181 ... A0A1L1RT94 38395592
    863926 8q7z:Be (2.5) BS01 rna N/A GO:0003735 ... E1BVB1 38395592
    863927 8q7z:Be (2.5) BS02 MG N/A GO:0003735 ... E1BVB1 38395592
    863928 8q7z:Bf (2.5) BS01 rna N/A GO:0003735 ... A0A8V0YS49 38395592
    863929 8q7z:Bf (2.5) BS02 MG N/A GO:0003735 ... A0A8V0YS49 38395592
    863930 8q7z:Bg (2.5) BS01 rna N/A GO:0003735 ... A0A1L1S0X5 38395592
    863931 8q7z:Bg (2.5) BS02 MG N/A GO:0003735 ... A0A1L1S0X5 38395592
    863932 8q7z:Bg (2.5) BS03 ZN N/A GO:0003735 ... A0A1L1S0X5 38395592
    863933 8q7z:Bh (2.5) BS01 rna N/A GO:0000463 ... Q98TF7 38395592
    863934 8q7z:Bh (2.5) BS02 rna N/A GO:0000463 ... Q98TF7 38395592
    863935 8q7z:Bi (2.5) BS01 rna N/A GO:0002181 ... Q98TF6 38395592
    863936 8q7z:Bj (2.5) BS01 rna N/A GO:0000448 ... E1C810 38395592
    863937 8q7z:Bj (2.5) BS02 rna N/A GO:0000448 ... E1C810 38395592
    863938 8q7z:Bj (2.5) BS03 ZN N/A GO:0000448 ... E1C810 38395592
    863939 8q7z:Bk (2.5) BS01 rna N/A GO:0003735 ... E1BU66 38395592
    863940 8q7z:Bl (2.5) BS01 rna N/A GO:0002181 ... Q98TF5 38395592
    863941 8q7z:Bl (2.5) BS02 rna N/A GO:0002181 ... Q98TF5 38395592
    863942 8q7z:Bm (2.5) BS01 rna N/A GO:0003735 ... O42388 38395592
    863943 8q7z:Bm (2.5) BS02 ZN N/A GO:0003735 ... O42388 38395592
    863944 8q7z:Bo (2.5) BS01 rna N/A GO:0003735 ... A0A8V0YUB1 38395592
    863945 8q7z:Bo (2.5) BS02 rna N/A GO:0003735 ... A0A8V0YUB1 38395592
    863946 8q7z:Bo (2.5) BS03 MG N/A GO:0003735 ... A0A8V0YUB1 38395592
    863947 8q7z:Bo (2.5) BS04 ZN N/A GO:0003735 ... A0A8V0YUB1 38395592
    863948 8q7z:Bp (2.5) BS01 rna N/A GO:0003735 ... P32046 38395592
    863949 8q7z:Bp (2.5) BS02 ZN N/A GO:0003735 ... P32046 38395592
    863950 8q7z:Br (2.5) BS01 rna N/A GO:0003735 ... Q5F346 38395592
    863951 8q80:A (1.85) BS01 MFU N/A N/A Q7N8I8 40459235
    863952 8q80:A (1.85) BS02 MFU N/A N/A Q7N8I8 40459235
    863953 8q80:A (1.85) BS03 MFU N/A N/A Q7N8I8 40459235
    863954 8q80:A (1.85) BS04 MFU N/A N/A Q7N8I8 40459235
    863955 8q80:B (1.85) BS01 MFU N/A N/A Q7N8I8 40459235
    863956 8q80:B (1.85) BS02 MFU N/A N/A Q7N8I8 40459235
    863957 8q80:B (1.85) BS03 MFU N/A N/A Q7N8I8 40459235
    863958 8q81:A (1.5) BS01 MFU N/A N/A Q7N8I7 40459235
    863959 8q81:A (1.5) BS02 MFU N/A N/A Q7N8I7 40459235
    863960 8q81:A (1.5) BS03 MFU N/A N/A Q7N8I7 40459235
    863961 8q81:A (1.5) BS04 MFU N/A N/A Q7N8I7 40459235
    863962 8q82:A (1.95) BS01 MFU N/A N/A Q7N8I6 40459235
    863963 8q82:A (1.95) BS02 MFU N/A N/A Q7N8I6 40459235
    863964 8q82:A (1.95) BS03 MFU N/A N/A Q7N8I6 40459235
    863965 8q82:B (1.95) BS01 MFU N/A N/A Q7N8I6 40459235
    863966 8q83:A (1.699) BS01 MFU N/A N/A Q7N8I5 40459235
    863967 8q83:A (1.699) BS02 MFU N/A N/A Q7N8I5 40459235
    863968 8q83:A (1.699) BS03 MFU N/A N/A Q7N8I5 40459235
    863969 8q83:A (1.699) BS04 MFU N/A N/A Q7N8I5 40459235
    863970 8q83:B (1.699) BS01 MFU N/A N/A Q7N8I5 40459235
    863971 8q83:B (1.699) BS02 MFU N/A N/A Q7N8I5 40459235
    863972 8q83:B (1.699) BS03 MFU N/A N/A Q7N8I5 40459235
    863973 8q83:B (1.699) BS04 MFU N/A N/A Q7N8I5 40459235
    863974 8q83:C (1.699) BS01 MFU N/A N/A Q7N8I5 40459235
    863975 8q83:C (1.699) BS02 MFU N/A N/A Q7N8I5 40459235
    863976 8q83:C (1.699) BS03 MFU N/A N/A Q7N8I5 40459235
    863977 8q83:C (1.699) BS04 MFU N/A N/A Q7N8I5 40459235
    863978 8q83:D (1.699) BS01 MFU N/A N/A Q7N8I5 40459235
    863979 8q83:D (1.699) BS02 MFU N/A N/A Q7N8I5 40459235
    863980 8q83:D (1.699) BS03 MFU N/A N/A Q7N8I5 40459235
    863981 8q83:D (1.699) BS04 MFU N/A N/A Q7N8I5 40459235
    863982 8q84:L (3.15) BS01 peptide ? GO:0005515 ... Q12248 38060647
    863983 8q84:Y (3.15) BS01 peptide ? GO:0005515 ... P69851 38060647
    863984 8q84:b (3.15) BS01 peptide ? GO:0005515 ... P35734 38060647
    863985 8q86:C (3.69) BS01 peptide N/A GO:0003677 ... A0FIL5 39987160
    863986 8q87:A (2.4) BS01 rna N/A GO:0003746 ... Q90705 38395592
    863987 8q87:A (2.4) BS02 rna N/A GO:0003746 ... Q90705 38395592
    863988 8q87:A (2.4) BS03 GDP N/A GO:0003746 ... Q90705 38395592
    863989 8q87:AA (2.4) BS01 rna N/A GO:0003735 ... A0A3Q2TV39 38395592
    863990 8q87:AB (2.4) BS01 rna N/A GO:0000028 ... A0A3Q2U825 38395592
    863991 8q87:AC (2.4) BS01 rna N/A GO:0003735 ... P79781 38395592
    863992 8q87:AC (2.4) BS02 ZN N/A GO:0003735 ... P79781 38395592
    863993 8q87:AD (2.4) BS01 rna N/A GO:0003735 ... N/A 38395592
    863994 8q87:AE (2.4) BS01 rna N/A GO:0003735 ... Q5ZM66 38395592
    863995 8q87:AE (2.4) BS02 ZN N/A GO:0003735 ... Q5ZM66 38395592
    863996 8q87:AF (2.4) BS01 rna N/A GO:0005080 ... P63247 38395592
    863997 8q87:AG (2.4) BS01 rna N/A GO:0002181 ... A0A8V0Z8V3 38395592
    863998 8q87:AG (2.4) BS02 MG N/A GO:0002181 ... A0A8V0Z8V3 38395592
    863999 8q87:AG (2.4) BS03 ZN N/A GO:0002181 ... A0A8V0Z8V3 38395592
    864000 8q87:AZ (2.4) BS01 rna N/A GO:0000028 ... P50890 38395592

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).