SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    864401 8r4l:A (2.0) BS08 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864402 8r4l:A (2.0) BS09 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864403 8r4l:A (2.0) BS10 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864404 8r4l:A (2.0) BS11 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864405 8r4l:A (2.0) BS12 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864406 8r4l:A (2.0) BS13 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864407 8r4l:B (2.0) BS01 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864408 8r4l:B (2.0) BS02 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864409 8r4l:B (2.0) BS03 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864410 8r4l:B (2.0) BS04 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864411 8r4l:B (2.0) BS05 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864412 8r4l:B (2.0) BS06 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864413 8r4l:B (2.0) BS07 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864414 8r4l:B (2.0) BS08 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864415 8r4l:B (2.0) BS09 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864416 8r4l:B (2.0) BS10 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864417 8r4l:B (2.0) BS11 CU1 N/A GO:0042802 ... A0A2D2D105 N/A
    864418 8r4m:A (1.95) BS01 CU1 N/A N/A A0A2D2D105 N/A
    864419 8r4m:A (1.95) BS02 CU1 N/A N/A A0A2D2D105 N/A
    864420 8r4m:A (1.95) BS03 CU1 N/A N/A A0A2D2D105 N/A
    864421 8r4m:A (1.95) BS04 CU1 N/A N/A A0A2D2D105 N/A
    864422 8r4m:A (1.95) BS05 CU1 N/A N/A A0A2D2D105 N/A
    864423 8r4m:A (1.95) BS06 CU1 N/A N/A A0A2D2D105 N/A
    864424 8r4m:A (1.95) BS07 CU1 N/A N/A A0A2D2D105 N/A
    864425 8r4m:A (1.95) BS08 CU1 N/A N/A A0A2D2D105 N/A
    864426 8r4m:A (1.95) BS09 CU1 N/A N/A A0A2D2D105 N/A
    864427 8r4m:A (1.95) BS10 CU1 N/A N/A A0A2D2D105 N/A
    864428 8r4m:A (1.95) BS11 CU1 N/A N/A A0A2D2D105 N/A
    864429 8r4m:A (1.95) BS12 CU1 N/A N/A A0A2D2D105 N/A
    864430 8r4m:B (1.95) BS01 CU1 N/A N/A A0A2D2D105 N/A
    864431 8r4m:B (1.95) BS02 CU1 N/A N/A A0A2D2D105 N/A
    864432 8r4m:B (1.95) BS03 CU1 N/A N/A A0A2D2D105 N/A
    864433 8r4m:B (1.95) BS04 CU1 N/A N/A A0A2D2D105 N/A
    864434 8r4m:B (1.95) BS05 CU1 N/A N/A A0A2D2D105 N/A
    864435 8r4m:B (1.95) BS06 CU1 N/A N/A A0A2D2D105 N/A
    864436 8r4m:B (1.95) BS07 CU1 N/A N/A A0A2D2D105 N/A
    864437 8r4m:B (1.95) BS08 CU1 N/A N/A A0A2D2D105 N/A
    864438 8r4m:B (1.95) BS09 CU1 N/A N/A A0A2D2D105 N/A
    864439 8r4m:B (1.95) BS10 CU1 N/A N/A A0A2D2D105 N/A
    864440 8r4m:B (1.95) BS11 CU1 N/A N/A A0A2D2D105 N/A
    864441 8r4m:B (1.95) BS12 CU1 N/A N/A A0A2D2D105 N/A
    864442 8r4o:A (2.725) BS01 XVI 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864443 8r4o:C (2.725) BS01 XVI 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864444 8r4o:E (2.725) BS01 XVI 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864445 8r4o:G (2.725) BS01 XVI 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864446 8r4o:I (2.725) BS01 XVI 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864447 8r4o:K (2.725) BS01 XVI 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864448 8r4q:A (2.838) BS01 DB8 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864449 8r4q:C (2.838) BS01 DB8 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864450 8r4q:E (2.838) BS01 DB8 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864451 8r4q:G (2.838) BS01 DB8 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864452 8r4q:I (2.838) BS01 DB8 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864453 8r4q:K (2.838) BS01 DB8 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864454 8r4u:A (2.416) BS01 XW3 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864455 8r4u:C (2.416) BS01 XW3 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864456 8r4u:E (2.416) BS01 XW3 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864457 8r4u:G (2.416) BS01 XW3 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864458 8r4v:A (1.9) BS01 XWA 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864459 8r4v:B (1.9) BS01 XWA 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864460 8r4v:C (1.9) BS01 XWA 2.7.11.1 GO:0004672 ... Q9Y2K2 38508313
    864461 8r4x:A (1.54) BS01 XZ0 ? GO:0005975 ... P36222 38427954
    864462 8r4x:B (1.54) BS01 XZ0 ? GO:0005975 ... P36222 38427954
    864463 8r4x:C (1.54) BS01 XZ0 ? GO:0005975 ... P36222 38427954
    864464 8r4x:D (1.54) BS01 XZ0 ? GO:0005975 ... P36222 38427954
    864465 8r4z:A (1.54) BS01 MG N/A GO:0008168 ... D5FKJ3 38887142
    864466 8r4z:A (1.54) BS02 MG N/A GO:0008168 ... D5FKJ3 38887142
    864467 8r4z:B (1.54) BS01 MG N/A GO:0008168 ... D5FKJ3 38887142
    864468 8r4z:B (1.54) BS02 MG N/A GO:0008168 ... D5FKJ3 38887142
    864469 8r52:A (2.1) BS01 EGT N/A GO:0000166 ... P00489 39433280
    864470 8r53:A (2.0) BS01 GLC N/A GO:0000166 ... P00489 39433280
    864471 8r53:A (2.0) BS02 KDH N/A GO:0000166 ... P00489 39433280
    864472 8r55:0 (3.57) BS01 rna ? GO:0003735 ... O34687 38177497
    864473 8r55:1 (3.57) BS01 rna ? GO:0003735 ... P56849 38177497
    864474 8r55:2 (3.57) BS01 rna ? GO:0003735 ... P05647 38177497
    864475 8r55:3 (3.57) BS01 rna ? GO:0003735 ... P55874 38177497
    864476 8r55:4 (3.57) BS01 rna ? GO:0003735 ... P20278 38177497
    864477 8r55:6 (3.57) BS01 rna ? GO:0003735 ... Q03223 38177497
    864478 8r55:B (3.57) BS01 rna ? GO:0003735 ... P21464 38177497
    864479 8r55:C (3.57) BS01 rna ? GO:0003676 ... P21465 38177497
    864480 8r55:C (3.57) BS02 rna ? GO:0003676 ... P21465 38177497
    864481 8r55:D (3.57) BS01 rna ? GO:0003723 ... P21466 38177497
    864482 8r55:E (3.57) BS01 rna ? GO:0003723 ... P21467 38177497
    864483 8r55:E (3.57) BS02 rna ? GO:0003723 ... P21467 38177497
    864484 8r55:F (3.57) BS01 rna ? GO:0003735 ... P21468 38177497
    864485 8r55:G (3.57) BS01 rna ? GO:0000028 ... P21469 38177497
    864486 8r55:H (3.57) BS01 rna ? GO:0003735 ... P12879 38177497
    864487 8r55:I (3.57) BS01 rna ? GO:0003723 ... P21470 38177497
    864488 8r55:J (3.57) BS01 rna ? GO:0000049 ... P21471 38177497
    864489 8r55:K (3.57) BS01 rna ? GO:0003735 ... P04969 38177497
    864490 8r55:L (3.57) BS01 rna ? GO:0000049 ... P21472 38177497
    864491 8r55:M (3.57) BS01 rna ? GO:0000049 ... P20282 38177497
    864492 8r55:M (3.57) BS02 rna ? GO:0000049 ... P20282 38177497
    864493 8r55:N (3.57) BS01 rna ? GO:0003735 ... P12878 38177497
    864494 8r55:O (3.57) BS01 rna ? GO:0003735 ... P21473 38177497
    864495 8r55:P (3.57) BS01 rna ? GO:0003735 ... P21474 38177497
    864496 8r55:Q (3.57) BS01 rna ? GO:0003735 ... P12874 38177497
    864497 8r55:R (3.57) BS01 rna ? GO:0003735 ... P21475 38177497
    864498 8r55:S (3.57) BS01 rna ? GO:0000028 ... P21476 38177497
    864499 8r55:T (3.57) BS01 rna ? GO:0003723 ... P21477 38177497
    864500 8r55:Z (3.57) BS01 rna ? GO:0002181 ... P42919 38177497
    864501 8r55:a (3.57) BS01 rna ? GO:0003735 ... P42920 38177497
    864502 8r55:b (3.57) BS01 rna ? GO:0003735 ... P42921 38177497
    864503 8r55:c (3.57) BS01 rna ? GO:0000049 ... P12877 38177497
    864504 8r55:c (3.57) BS02 rna ? GO:0000049 ... P12877 38177497
    864505 8r55:c (3.57) BS03 rna ? GO:0000049 ... P12877 38177497
    864506 8r55:d (3.57) BS01 rna N/A GO:0002181 ... P46898 38177497
    864507 8r55:e (3.57) BS01 rna ? GO:0003729 ... P70974 38177497
    864508 8r55:f (3.57) BS01 rna ? GO:0003735 ... P12875 38177497
    864509 8r55:f (3.57) BS02 rna ? GO:0003735 ... P12875 38177497
    864510 8r55:i (3.57) BS01 rna ? GO:0003735 ... P19946 38177497
    864511 8r55:j (3.57) BS01 rna ? GO:0000049 ... P14577 38177497
    864512 8r55:j (3.57) BS02 rna ? GO:0000049 ... P14577 38177497
    864513 8r55:k (3.57) BS01 rna ? GO:0003735 ... P20277 38177497
    864514 8r55:l (3.57) BS01 rna ? GO:0003735 ... P46899 38177497
    864515 8r55:l (3.57) BS02 rna ? GO:0003735 ... P46899 38177497
    864516 8r55:m (3.57) BS01 rna ? GO:0003735 ... O31742 38177497
    864517 8r55:m (3.57) BS02 rna ? GO:0003735 ... O31742 38177497
    864518 8r55:n (3.57) BS01 rna ? GO:0000027 ... P55873 38177497
    864519 8r55:o (3.57) BS01 rna ? GO:0003723 ... P26908 38177497
    864520 8r55:r (3.57) BS01 rna ? GO:0003735 ... P42060 38177497
    864521 8r55:s (3.57) BS01 rna ? GO:0003735 ... P42924 38177497
    864522 8r55:t (3.57) BS01 rna ? GO:0003677 ... P0CI78 38177497
    864523 8r55:u (3.57) BS01 rna ? GO:0003735 ... P05657 38177497
    864524 8r55:u (3.57) BS02 rna ? GO:0003735 ... P05657 38177497
    864525 8r55:v (3.57) BS01 rna ? GO:0003735 ... P37807 38177497
    864526 8r55:w (3.57) BS01 rna ? GO:0003735 ... P12873 38177497
    864527 8r55:x (3.57) BS01 rna ? GO:0003735 ... P19947 38177497
    864528 8r55:z (3.57) BS01 rna N/A GO:0003677 ... P94545 38177497
    864529 8r56:A (2.45) BS01 Y2W 3.2.1.- GO:0003824 ... D5E1T0 38647177
    864530 8r56:B (2.45) BS01 Y2W 3.2.1.- GO:0003824 ... D5E1T0 38647177
    864531 8r56:C (2.45) BS01 Y2W 3.2.1.- GO:0003824 ... D5E1T0 38647177
    864532 8r56:D (2.45) BS01 Y2W 3.2.1.- GO:0003824 ... D5E1T0 38647177
    864533 8r57:F (2.55) BS01 rna ? GO:0003723 ... W5I1R7 38139282
    864534 8r57:K (2.55) BS01 rna ? GO:0003723 ... W5AUH7 38139282
    864535 8r57:M (2.55) BS01 rna ? GO:0003735 ... W5FEZ3 38139282
    864536 8r57:P (2.55) BS01 rna ? GO:0000028 ... W5D067 38139282
    864537 8r57:P (2.55) BS02 MG ? GO:0000028 ... W5D067 38139282
    864538 8r57:Q (2.55) BS01 rna ? GO:0000462 ... W5DS33 38139282
    864539 8r57:R (2.55) BS01 rna ? GO:0000028 ... A0A3B6LV48 38139282
    864540 8r57:S (2.55) BS01 rna ? GO:0003676 ... Q8L806 38139282
    864541 8r57:T (2.55) BS01 rna ? GO:0003735 ... W5FWF5 38139282
    864542 8r57:U (2.55) BS01 rna ? GO:0003735 ... U5HTD8 38139282
    864543 8r57:Z (2.55) BS01 rna ? GO:0003735 ... W5EP45 38139282
    864544 8r57:c (2.55) BS01 rna ? GO:0000028 ... W5E8X2 38139282
    864545 8r57:d (2.55) BS01 rna ? GO:0002181 ... Q5I7K3 38139282
    864546 8r57:d (2.55) BS02 ZN ? GO:0002181 ... Q5I7K3 38139282
    864547 8r57:f (2.55) BS01 rna ? GO:0003729 ... W5A9E1 38139282
    864548 8r57:f (2.55) BS02 ZN ? GO:0003729 ... W5A9E1 38139282
    864549 8r57:g (2.55) BS01 rna ? GO:0005080 ... W5D4F5 38139282
    864550 8r57:h (2.55) BS01 rna ? GO:0003735 ... A0A3B5XY60 38139282
    864551 8r58:A (2.31) BS01 peptide N/A N/A P51812 N/A
    864552 8r58:A (2.31) BS02 QCT N/A N/A P51812 N/A
    864553 8r59:0 (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864554 8r59:0A (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864555 8r59:0B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864556 8r59:0C (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864557 8r59:1 (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864558 8r59:1A (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864559 8r59:1B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864560 8r59:1C (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864561 8r59:2 (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864562 8r59:2A (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864563 8r59:2B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864564 8r59:2C (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864565 8r59:3 (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864566 8r59:3A (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864567 8r59:3B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864568 8r59:3C (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864569 8r59:4 (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864570 8r59:4A (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864571 8r59:4B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864572 8r59:4C (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864573 8r59:5 (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864574 8r59:5A (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864575 8r59:5B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864576 8r59:5C (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864577 8r59:6 (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864578 8r59:6A (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864579 8r59:6B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864580 8r59:6C (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864581 8r59:7 (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864582 8r59:7A (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864583 8r59:7B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864584 8r59:7C (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864585 8r59:8 (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864586 8r59:8A (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864587 8r59:8B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864588 8r59:8C (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864589 8r59:9 (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864590 8r59:9A (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864591 8r59:9B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864592 8r59:9C (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864593 8r59:AA (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864594 8r59:AB (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864595 8r59:AC (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864596 8r59:AD (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864597 8r59:B (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864598 8r59:BA (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864599 8r59:BB (2.86) BS01 CO N/A N/A Q9X6J6 39676522
    864600 8r59:BC (2.86) BS01 CO N/A N/A Q9X6J6 39676522

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).