SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    865001 8r5a:s (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865002 8r5a:sA (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865003 8r5a:sB (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865004 8r5a:sC (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865005 8r5a:t (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865006 8r5a:tA (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865007 8r5a:tB (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865008 8r5a:tC (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865009 8r5a:u (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865010 8r5a:uA (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865011 8r5a:uB (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865012 8r5a:uC (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865013 8r5a:v (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865014 8r5a:vA (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865015 8r5a:vB (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865016 8r5a:vC (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865017 8r5a:w (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865018 8r5a:wA (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865019 8r5a:wB (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865020 8r5a:wC (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865021 8r5a:x (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865022 8r5a:xA (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865023 8r5a:xB (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865024 8r5a:xC (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865025 8r5a:y (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865026 8r5a:yA (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865027 8r5a:yB (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865028 8r5a:yC (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865029 8r5a:z (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865030 8r5a:zA (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865031 8r5a:zB (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865032 8r5a:zC (2.84) BS01 CO N/A N/A Q9X6J6 39676522
    865033 8r5b:A (1.6) BS01 Y32 2.3.2.27 N/A Q9C029 N/A
    865034 8r5b:B (1.6) BS01 Y32 2.3.2.27 N/A Q9C029 N/A
    865035 8r5c:A (1.6) BS01 Y3C 2.3.2.27 N/A Q9C029 38934237
    865036 8r5e:A (1.7) BS01 ANP N/A N/A P45983 N/A
    865037 8r5e:A (1.7) BS02 Y6K N/A N/A P45983 N/A
    865038 8r5f:A (1.65) BS01 ANP N/A GO:0000165 ... P28482 N/A
    865039 8r5f:A (1.65) BS02 Y3H N/A GO:0000165 ... P28482 N/A
    865040 8r5g:A (4.28) BS01 ZN N/A GO:0046872 ... A1YTN7 N/A
    865041 8r5h:C (3.44) BS01 SY8 2.3.2.23 N/A Q712K3 38382526
    865042 8r5h:F (3.44) BS01 759 ? N/A O60885 38382526
    865043 8r5h:H (3.44) BS01 759 ? N/A P40337 38382526
    865044 8r5h:R (3.44) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 38382526
    865045 8r5h:R (3.44) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 38382526
    865046 8r5h:R (3.44) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 38382526
    865047 8r5k:A (0.89) BS01 Y6Z 5.2.1.8 GO:0003755 ... Q13451 38582133
    865048 8r5l:A (2.2) BS01 CA N/A N/A P16581 38728868
    865049 8r5l:A (2.2) BS02 Y6T N/A N/A P16581 38728868
    865050 8r5m:A (2.49) BS01 Y6O N/A N/A P16581 38728868
    865051 8r5m:A (2.49) BS02 CA N/A N/A P16581 38728868
    865052 8r5n:A (1.812) BS01 ATP N/A GO:0007219 ... Q86Y01 39048679
    865053 8r5n:B (1.812) BS01 ATP N/A GO:0007219 ... Q86Y01 39048679
    865054 8r5n:B (1.812) BS02 ATP N/A GO:0007219 ... Q86Y01 39048679
    865055 8r5o:E (2.49) BS01 ZN 2.7.7.6 GO:0000428 ... A0A6C0M829 38428394
    865056 8r5o:I (2.49) BS01 FE N/A GO:0004784 ... N/A 38428394
    865057 8r5o:L (2.49) BS01 SAH N/A N/A N/A 38428394
    865058 8r5o:N (2.49) BS01 FE N/A GO:0004784 ... N/A 38428394
    865059 8r5q:A (2.62) BS01 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865060 8r5q:A (2.62) BS02 ZIQ 1.13.11.11 GO:0004833 ... P48775 39537789
    865061 8r5q:A (2.62) BS03 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865062 8r5q:B (2.62) BS01 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865063 8r5q:B (2.62) BS02 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865064 8r5q:B (2.62) BS03 ZIQ 1.13.11.11 GO:0004833 ... P48775 39537789
    865065 8r5q:C (2.62) BS01 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865066 8r5q:C (2.62) BS02 ZIQ 1.13.11.11 GO:0004833 ... P48775 39537789
    865067 8r5q:C (2.62) BS03 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865068 8r5q:D (2.62) BS01 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865069 8r5q:D (2.62) BS02 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865070 8r5q:D (2.62) BS03 ZIQ 1.13.11.11 GO:0004833 ... P48775 39537789
    865071 8r5r:A (3.078) BS01 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865072 8r5r:A (3.078) BS02 ZIQ 1.13.11.11 GO:0004833 ... P48775 39537789
    865073 8r5r:A (3.078) BS03 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865074 8r5r:B (3.078) BS01 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865075 8r5r:B (3.078) BS02 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865076 8r5r:B (3.078) BS03 ZIQ 1.13.11.11 GO:0004833 ... P48775 39537789
    865077 8r5r:C (3.078) BS01 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865078 8r5r:C (3.078) BS02 ZIQ 1.13.11.11 GO:0004833 ... P48775 39537789
    865079 8r5r:C (3.078) BS03 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865080 8r5r:D (3.078) BS01 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865081 8r5r:D (3.078) BS02 Y5N 1.13.11.11 GO:0004833 ... P48775 39537789
    865082 8r5r:D (3.078) BS03 ZIQ 1.13.11.11 GO:0004833 ... P48775 39537789
    865083 8r5t:A (1.58) BS01 Y4E 3.5.2.6 GO:0008270 ... C7C422 38373290
    865084 8r5t:A (1.58) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 38373290
    865085 8r5t:A (1.58) BS03 ZN 3.5.2.6 GO:0008270 ... C7C422 38373290
    865086 8r5t:B (1.58) BS01 ZN 3.5.2.6 GO:0008270 ... C7C422 38373290
    865087 8r5t:B (1.58) BS02 ZN 3.5.2.6 GO:0008270 ... C7C422 38373290
    865088 8r5u:A (1.56) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 38373290
    865089 8r5u:A (1.56) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 38373290
    865090 8r5u:A (1.56) BS03 Y4E 3.5.2.6 GO:0016787 ... Q9K2N0 38373290
    865091 8r5u:B (1.56) BS01 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 38373290
    865092 8r5u:B (1.56) BS02 ZN 3.5.2.6 GO:0016787 ... Q9K2N0 38373290
    865093 8r5u:B (1.56) BS03 Y4E 3.5.2.6 GO:0016787 ... Q9K2N0 38373290
    865094 8r5v:A (1.8) BS01 Y4I 4.6.1.18 GO:0003676 ... P61823 39392463
    865095 8r5v:A (1.8) BS02 TF4 4.6.1.18 GO:0003676 ... P61823 39392463
    865096 8r5v:B (1.8) BS01 TF4 4.6.1.18 GO:0003676 ... P61823 39392463
    865097 8r60:A (3.23) BS01 rna 3.1.-.- GO:0003723 ... Q3HM39 38563748
    865098 8r60:A (3.23) BS02 rna 3.1.-.- GO:0003723 ... Q3HM39 38563748
    865099 8r60:A (3.23) BS03 peptide 3.1.-.- GO:0003723 ... Q3HM39 38563748
    865100 8r60:B (3.23) BS01 rna 2.7.7.48 GO:0000166 ... Q3HM40 38563748
    865101 8r60:B (3.23) BS02 rna 2.7.7.48 GO:0000166 ... Q3HM40 38563748
    865102 8r60:C (3.23) BS01 rna ? GO:0001172 ... Q3HM41 38563748
    865103 8r64:A (3.2) BS01 ATP N/A GO:0005524 ... Q6PIW4 39636933
    865104 8r64:B (3.2) BS01 peptide N/A GO:0005524 ... Q6PIW4 39636933
    865105 8r64:B (3.2) BS02 ATP N/A GO:0005524 ... Q6PIW4 39636933
    865106 8r64:B (3.2) BS03 ATP N/A GO:0005524 ... Q6PIW4 39636933
    865107 8r64:C (3.2) BS01 peptide N/A GO:0005524 ... Q6PIW4 39636933
    865108 8r64:C (3.2) BS02 ATP N/A GO:0005524 ... Q6PIW4 39636933
    865109 8r64:C (3.2) BS03 ATP N/A GO:0005524 ... Q6PIW4 39636933
    865110 8r64:D (3.2) BS01 peptide N/A GO:0005524 ... Q6PIW4 39636933
    865111 8r64:D (3.2) BS02 ATP N/A GO:0005524 ... Q6PIW4 39636933
    865112 8r64:D (3.2) BS03 ATP N/A GO:0005524 ... Q6PIW4 39636933
    865113 8r64:E (3.2) BS01 peptide N/A GO:0005524 ... Q6PIW4 39636933
    865114 8r64:E (3.2) BS02 ATP N/A GO:0005524 ... Q6PIW4 39636933
    865115 8r64:F (3.2) BS01 peptide N/A GO:0005524 ... Q6PIW4 39636933
    865116 8r64:F (3.2) BS02 ATP N/A GO:0005524 ... Q6PIW4 39636933
    865117 8r64:F (3.2) BS03 ADP N/A GO:0005524 ... Q6PIW4 39636933
    865118 8r65:A (4.23) BS01 rna 3.1.-.- GO:0003723 ... Q3HM39 38563748
    865119 8r65:A (4.23) BS02 rna 3.1.-.- GO:0003723 ... Q3HM39 38563748
    865120 8r65:A (4.23) BS03 peptide 3.1.-.- GO:0003723 ... Q3HM39 38563748
    865121 8r65:B (4.23) BS01 rna 2.7.7.48 GO:0000166 ... Q3HM40 38563748
    865122 8r65:B (4.23) BS02 rna 2.7.7.48 GO:0000166 ... Q3HM40 38563748
    865123 8r65:C (4.23) BS01 rna ? GO:0001172 ... Q3HM41 38563748
    865124 8r67:A (2.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38735475
    865125 8r67:A (2.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 38735475
    865126 8r67:B (2.2) BS01 GDP ? GO:0000226 ... Q6B856 38735475
    865127 8r67:B (2.2) BS02 CA ? GO:0000226 ... Q6B856 38735475
    865128 8r67:C (2.2) BS01 GTP 3.6.5.- GO:0000226 ... P81947 38735475
    865129 8r67:C (2.2) BS02 CA 3.6.5.- GO:0000226 ... P81947 38735475
    865130 8r67:D (2.2) BS01 GDP ? GO:0000226 ... Q6B856 38735475
    865131 8r67:D (2.2) BS02 Y74 ? GO:0000226 ... Q6B856 38735475
    865132 8r67:D (2.2) BS03 Y74 ? GO:0000226 ... Q6B856 38735475
    865133 8r67:F (2.2) BS01 ACP 6.3.2.25 GO:0000226 ... A0A8V0Z8P0 38735475
    865134 8r69:E (4.3) BS01 ZN N/A GO:0046872 ... A1YTN7 N/A
    865135 8r6a:A (2.4) BS01 ADP N/A GO:0007219 ... Q86Y01 39048679
    865136 8r6a:B (2.4) BS01 ADP N/A GO:0007219 ... Q86Y01 39048679
    865137 8r6b:A (2.5) BS01 ADP N/A GO:0007219 ... Q86Y01 39048679
    865138 8r6c:0 (2.2) BS01 rna N/A GO:0000027 ... P0A7N9 38826346
    865139 8r6c:1 (2.2) BS01 rna N/A GO:0002181 ... P0A7P5 38826346
    865140 8r6c:2 (2.2) BS01 rna N/A GO:0002181 ... P0A7Q1 38826346
    865141 8r6c:3 (2.2) BS01 rna N/A GO:0002181 ... P0A7Q6 38826346
    865142 8r6c:3 (2.2) BS02 ZN N/A GO:0002181 ... P0A7Q6 38826346
    865143 8r6c:4 (2.2) BS01 rna N/A GO:0002181 ... P0A7M9 38826346
    865144 8r6c:4 (2.2) BS02 ZN N/A GO:0002181 ... P0A7M9 38826346
    865145 8r6c:B (2.2) BS01 rna N/A GO:0000028 ... P0A7V0 38826346
    865146 8r6c:C (2.2) BS01 rna N/A GO:0000028 ... P0A7V3 38826346
    865147 8r6c:D (2.2) BS01 rna N/A GO:0000028 ... P0A7V8 38826346
    865148 8r6c:E (2.2) BS01 rna N/A GO:0000028 ... P0A7W1 38826346
    865149 8r6c:F (2.2) BS01 rna N/A GO:0002181 ... P02358 38826346
    865150 8r6c:G (2.2) BS01 rna N/A GO:0000028 ... P02359 38826346
    865151 8r6c:H (2.2) BS01 rna N/A GO:0000028 ... P0A7W7 38826346
    865152 8r6c:I (2.2) BS01 rna N/A GO:0000049 ... P0A7X3 38826346
    865153 8r6c:I (2.2) BS02 rna N/A GO:0000049 ... P0A7X3 38826346
    865154 8r6c:J (2.2) BS01 rna N/A GO:0000049 ... P0A7R5 38826346
    865155 8r6c:K (2.2) BS01 rna N/A GO:0002181 ... P0A7R9 38826346
    865156 8r6c:L (2.2) BS01 rna N/A GO:0000049 ... P0A7S3 38826346
    865157 8r6c:M (2.2) BS01 rna N/A GO:0000049 ... P0A7S9 38826346
    865158 8r6c:M (2.2) BS02 rna N/A GO:0000049 ... P0A7S9 38826346
    865159 8r6c:N (2.2) BS01 rna N/A GO:0000028 ... P0AG59 38826346
    865160 8r6c:O (2.2) BS01 rna N/A GO:0000028 ... P0ADZ4 38826346
    865161 8r6c:O (2.2) BS02 rna N/A GO:0000028 ... P0ADZ4 38826346
    865162 8r6c:P (2.2) BS01 rna N/A GO:0000028 ... P0A7T3 38826346
    865163 8r6c:Q (2.2) BS01 rna N/A GO:0000028 ... P0AG63 38826346
    865164 8r6c:R (2.2) BS01 rna N/A GO:0002181 ... P0A7T7 38826346
    865165 8r6c:S (2.2) BS01 rna N/A GO:0000028 ... P0A7U3 38826346
    865166 8r6c:T (2.2) BS01 rna N/A GO:0000028 ... P0A7U7 38826346
    865167 8r6c:U (2.2) BS01 rna N/A GO:0000028 ... P68679 38826346
    865168 8r6c:c (2.2) BS01 rna N/A GO:0000027 ... P60422 38826346
    865169 8r6c:c (2.2) BS02 rna N/A GO:0000027 ... P60422 38826346
    865170 8r6c:d (2.2) BS01 rna N/A GO:0000027 ... P60438 38826346
    865171 8r6c:e (2.2) BS01 rna N/A GO:0001070 ... P60723 38826346
    865172 8r6c:f (2.2) BS01 rna N/A GO:0000027 ... P62399 38826346
    865173 8r6c:f (2.2) BS02 rna N/A GO:0000027 ... P62399 38826346
    865174 8r6c:f (2.2) BS03 rna N/A GO:0000027 ... P62399 38826346
    865175 8r6c:g (2.2) BS01 rna N/A GO:0000027 ... P0AG55 38826346
    865176 8r6c:h (2.2) BS01 rna N/A GO:0002181 ... P0A7R1 38826346
    865177 8r6c:i (2.2) BS01 rna N/A GO:0002181 ... P0AA10 38826346
    865178 8r6c:j (2.2) BS01 rna N/A GO:0002181 ... P0ADY3 38826346
    865179 8r6c:j (2.2) BS02 rna N/A GO:0002181 ... P0ADY3 38826346
    865180 8r6c:k (2.2) BS01 rna N/A GO:0002181 ... P02413 38826346
    865181 8r6c:l (2.2) BS01 rna N/A GO:0000027 ... P0ADY7 38826346
    865182 8r6c:l (2.2) BS02 rna N/A GO:0000027 ... P0ADY7 38826346
    865183 8r6c:l (2.2) BS03 rna N/A GO:0000027 ... P0ADY7 38826346
    865184 8r6c:m (2.2) BS01 rna N/A GO:0000027 ... P0AG44 38826346
    865185 8r6c:n (2.2) BS01 rna N/A GO:0002181 ... P0C018 38826346
    865186 8r6c:n (2.2) BS02 rna N/A GO:0002181 ... P0C018 38826346
    865187 8r6c:o (2.2) BS01 rna N/A GO:0000027 ... P0A7K6 38826346
    865188 8r6c:o (2.2) BS02 rna N/A GO:0000027 ... P0A7K6 38826346
    865189 8r6c:p (2.2) BS01 rna N/A GO:0000027 ... P0A7L3 38826346
    865190 8r6c:q (2.2) BS01 rna N/A GO:0002181 ... P0AG48 38826346
    865191 8r6c:r (2.2) BS01 rna N/A GO:0002181 ... P61175 38826346
    865192 8r6c:s (2.2) BS01 rna N/A GO:0000027 ... P0ADZ0 38826346
    865193 8r6c:t (2.2) BS01 rna N/A GO:0000027 ... P60624 38826346
    865194 8r6c:u (2.2) BS01 rna N/A GO:0000027 ... P68919 38826346
    865195 8r6c:u (2.2) BS02 rna N/A GO:0000027 ... P68919 38826346
    865196 8r6c:v (2.2) BS01 rna N/A GO:0000027 ... P0A7L8 38826346
    865197 8r6c:v (2.2) BS02 rna N/A GO:0000027 ... P0A7L8 38826346
    865198 8r6c:v (2.2) BS03 rna N/A GO:0000027 ... P0A7L8 38826346
    865199 8r6c:w (2.2) BS01 rna N/A GO:0000027 ... P0A7M2 38826346
    865200 8r6c:w (2.2) BS02 rna N/A GO:0000027 ... P0A7M2 38826346

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).