SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    865601 8r98:B (3.0) BS01 RET N/A N/A N/A N/A
    865602 8r98:C (3.0) BS01 RET N/A N/A N/A N/A
    865603 8r98:D (3.0) BS01 RET N/A N/A N/A N/A
    865604 8r98:E (3.0) BS01 RET N/A N/A N/A N/A
    865605 8r98:F (3.0) BS01 RET N/A N/A N/A N/A
    865606 8r98:G (3.0) BS01 RET N/A N/A N/A N/A
    865607 8r98:H (3.0) BS01 RET N/A N/A N/A N/A
    865608 8r98:I (3.0) BS01 RET N/A N/A N/A N/A
    865609 8r98:K (3.0) BS01 RET N/A N/A N/A N/A
    865610 8r99:A (1.81) BS01 ANP 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865611 8r99:A (1.81) BS02 MG 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865612 8r9a:A (1.71) BS01 I74 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865613 8r9b:A (2.21) BS01 ANP 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865614 8r9b:A (2.21) BS02 MG 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865615 8r9b:B (2.21) BS01 ANP 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865616 8r9b:B (2.21) BS02 MG 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865617 8r9b:C (2.21) BS01 ANP 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865618 8r9b:D (2.21) BS01 ANP 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865619 8r9c:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865620 8r9d:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865621 8r9e:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865622 8r9f:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865623 8r9g:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865624 8r9h:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865625 8r9i:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865626 8r9j:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865627 8r9k:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865628 8r9l:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865629 8r9m:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865630 8r9n:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865631 8r9o:A (2.22) BS01 YN3 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865632 8r9o:B (2.22) BS01 YN3 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865633 8r9p:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865634 8r9q:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865635 8r9r:A (2.42) BS01 GDP ? GO:0003924 ... A4Y8J9 38376823
    865636 8r9s:A (2.78) BS01 YPK 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865637 8r9s:B (2.78) BS01 YPK 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865638 8r9t:A (1.4) BS01 CA N/A N/A A0A2K3CYA1 39255848
    865639 8r9u:A (1.937) BS01 YNK 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865640 8r9u:B (1.937) BS01 YNK 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38870939
    865641 8r9v:A (4.4) BS01 MG N/A N/A Q99104 N/A
    865642 8r9v:A (4.4) BS02 ADP N/A N/A Q99104 N/A
    865643 8r9v:B (4.4) BS01 ADP N/A GO:0000287 ... P68135 N/A
    865644 8r9v:C (4.4) BS01 ADP N/A GO:0000287 ... P68135 N/A
    865645 8r9v:D (4.4) BS01 ADP N/A GO:0000287 ... P68135 N/A
    865646 8r9x:L (3.1) BS01 FUC N/A N/A N/A 38909062
    865647 8ra1:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865648 8ra2:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865649 8ra3:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865650 8ra4:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865651 8ra5:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865652 8ra6:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865653 8ra7:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865654 8ra8:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865655 8ra9:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865656 8raa:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865657 8rab:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865658 8rac:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865659 8rad:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865660 8rae:A (1.4) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P68082 38355794
    865661 8raf:A (2.0) BS01 PLP ? GO:0003824 ... F4KWH0 38649133
    865662 8rai:A (2.0) BS01 ZXN ? GO:0003824 ... F4KWH0 38649133
    865663 8rak:A (1.85) BS01 FMN N/A GO:0004151 ... Q02127 38805244
    865664 8rak:A (1.85) BS02 YMH N/A GO:0004151 ... Q02127 38805244
    865665 8ral:A (2.1) BS01 peptide N/A N/A P14434 N/A
    865666 8ral:B (2.1) BS01 peptide N/A N/A P14483 N/A
    865667 8ram:A (2.8) BS01 dna N/A GO:0000428 ... P04050 39424994
    865668 8ram:A (2.8) BS02 rna N/A GO:0000428 ... P04050 39424994
    865669 8ram:A (2.8) BS03 dna N/A GO:0000428 ... P04050 39424994
    865670 8ram:A (2.8) BS04 ZN N/A GO:0000428 ... P04050 39424994
    865671 8ram:A (2.8) BS05 MG N/A GO:0000428 ... P04050 39424994
    865672 8ram:B (2.8) BS01 rna N/A GO:0000428 ... P08518 39424994
    865673 8ram:B (2.8) BS02 dna N/A GO:0000428 ... P08518 39424994
    865674 8ram:B (2.8) BS03 ZN N/A GO:0000428 ... P08518 39424994
    865675 8ram:C (2.8) BS01 ZN N/A GO:0000428 ... P16370 39424994
    865676 8ram:E (2.8) BS01 dna N/A GO:0000428 ... P20434 39424994
    865677 8ram:I (2.8) BS01 ZN N/A GO:0000428 ... P27999 39424994
    865678 8ram:J (2.8) BS01 ZN N/A GO:0000428 ... P22139 39424994
    865679 8ram:L (2.8) BS01 ZN N/A GO:0000428 ... P40422 39424994
    865680 8ram:M (2.8) BS01 ZN N/A GO:0000993 ... P36053 39424994
    865681 8ram:O (2.8) BS01 rna N/A GO:0001147 ... Q00416 39424994
    865682 8ram:Z (2.8) BS01 dna N/A GO:0000245 ... P27692 39424994
    865683 8ran:O (3.25) BS01 rna N/A GO:0001147 ... Q00416 39424994
    865684 8rao:O (4.4) BS01 rna N/A GO:0001147 ... Q00416 39424994
    865685 8rao:O (4.4) BS02 ADP N/A GO:0001147 ... Q00416 39424994
    865686 8rao:O (4.4) BS03 MG N/A GO:0001147 ... Q00416 39424994
    865687 8rao:O (4.4) BS04 BEF N/A GO:0001147 ... Q00416 39424994
    865688 8rap:A (4.3) BS01 dna N/A GO:0000428 ... P04050 39424994
    865689 8rap:A (4.3) BS02 rna N/A GO:0000428 ... P04050 39424994
    865690 8rap:A (4.3) BS03 dna N/A GO:0000428 ... P04050 39424994
    865691 8rap:A (4.3) BS04 ZN N/A GO:0000428 ... P04050 39424994
    865692 8rap:A (4.3) BS05 MG N/A GO:0000428 ... P04050 39424994
    865693 8rap:B (4.3) BS01 dna N/A GO:0000428 ... P08518 39424994
    865694 8rap:B (4.3) BS02 rna N/A GO:0000428 ... P08518 39424994
    865695 8rap:B (4.3) BS03 dna N/A GO:0000428 ... P08518 39424994
    865696 8rap:B (4.3) BS04 ZN N/A GO:0000428 ... P08518 39424994
    865697 8rap:C (4.3) BS01 ZN N/A GO:0000428 ... P16370 39424994
    865698 8rap:I (4.3) BS01 ZN N/A GO:0000428 ... P27999 39424994
    865699 8rap:J (4.3) BS01 ZN N/A GO:0000428 ... P22139 39424994
    865700 8rap:L (4.3) BS01 ZN N/A GO:0000428 ... P40422 39424994
    865701 8rap:M (4.3) BS01 ZN N/A GO:0000993 ... P36053 39424994
    865702 8rap:O (4.3) BS01 rna N/A GO:0001147 ... Q00416 39424994
    865703 8rap:O (4.3) BS02 ADP N/A GO:0001147 ... Q00416 39424994
    865704 8rap:O (4.3) BS03 MG N/A GO:0001147 ... Q00416 39424994
    865705 8rap:O (4.3) BS04 BEF N/A GO:0001147 ... Q00416 39424994
    865706 8rap:Z (4.3) BS01 dna N/A GO:0000245 ... P27692 39424994
    865707 8rap:Z (4.3) BS02 dna N/A GO:0000245 ... P27692 39424994
    865708 8raq:A (1.4) BS01 SAM N/A GO:0005515 ... P9WPB1 N/A
    865709 8raq:A0A0 (1.4) BS01 SAM N/A GO:0005515 ... P9WPB1 N/A
    865710 8rar:A (1.15) BS01 ZN N/A GO:0002009 ... P00918 38856178
    865711 8rar:A (1.15) BS02 YNF N/A GO:0002009 ... P00918 38856178
    865712 8ras:C (2.62) BS01 dna 2.7.7.6 GO:0000428 ... P46818 38428394
    865713 8ras:C (2.62) BS02 dna 2.7.7.6 GO:0000428 ... P46818 38428394
    865714 8ras:C (2.62) BS03 rna 2.7.7.6 GO:0000428 ... P46818 38428394
    865715 8ras:D (2.62) BS01 dna 2.7.7.6 GO:0000287 ... A0A6C0M5W0 38428394
    865716 8ras:D (2.62) BS02 dna 2.7.7.6 GO:0000287 ... A0A6C0M5W0 38428394
    865717 8ras:D (2.62) BS03 MG 2.7.7.6 GO:0000287 ... A0A6C0M5W0 38428394
    865718 8ras:E (2.62) BS01 dna 2.7.7.6 GO:0000428 ... A0A6C0M829 38428394
    865719 8ras:E (2.62) BS02 ZN 2.7.7.6 GO:0000428 ... A0A6C0M829 38428394
    865720 8ras:F (2.62) BS01 dna N/A N/A N/A 38428394
    865721 8ras:F (2.62) BS02 dna N/A N/A N/A 38428394
    865722 8ras:I (2.62) BS01 FE N/A GO:0004784 ... N/A 38428394
    865723 8ras:L (2.62) BS01 SAH N/A N/A N/A 38428394
    865724 8ras:N (2.62) BS01 FE N/A GO:0004784 ... N/A 38428394
    865725 8rb6:A (2.0) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 38364714
    865726 8rb6:A (2.0) BS02 YMC 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 38364714
    865727 8rb6:B (2.0) BS01 NAP 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 38364714
    865728 8rb6:B (2.0) BS02 YMC 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64
    GO:0001523 ... P42330 38364714
    865729 8rb8:A (3.41) BS01 FES N/A GO:0005886 ... C1DMA8 38890433
    865730 8rb8:B (3.41) BS01 SF4 N/A GO:0005886 ... C1DMA7 38890433
    865731 8rb8:B (3.41) BS02 SF4 N/A GO:0005886 ... C1DMA7 38890433
    865732 8rb8:C (3.41) BS01 FMN N/A GO:0005886 ... C1DMA6 38890433
    865733 8rb8:C (3.41) BS02 SF4 N/A GO:0005886 ... C1DMA6 38890433
    865734 8rb8:C (3.41) BS03 SF4 N/A GO:0005886 ... C1DMA6 38890433
    865735 8rb8:D (3.41) BS01 RBF N/A GO:0005886 ... C1DMA5 38890433
    865736 8rb8:D (3.41) BS02 FMN N/A GO:0005886 ... C1DMA5 38890433
    865737 8rb8:E (3.41) BS01 FES N/A GO:0005886 ... Q9F5Y1 38890433
    865738 8rb8:G (3.41) BS01 FMN N/A GO:0005886 ... C1DMA4 38890433
    865739 8rb9:A (3.19) BS01 FES N/A GO:0005886 ... C1DMA8 38890433
    865740 8rb9:B (3.19) BS01 SF4 N/A GO:0005886 ... C1DMA7 38890433
    865741 8rb9:B (3.19) BS02 SF4 N/A GO:0005886 ... C1DMA7 38890433
    865742 8rb9:C (3.19) BS01 FMN N/A GO:0005886 ... C1DMA6 38890433
    865743 8rb9:C (3.19) BS02 SF4 N/A GO:0005886 ... C1DMA6 38890433
    865744 8rb9:C (3.19) BS03 SF4 N/A GO:0005886 ... C1DMA6 38890433
    865745 8rb9:D (3.19) BS01 RBF N/A GO:0005886 ... C1DMA5 38890433
    865746 8rb9:D (3.19) BS02 FMN N/A GO:0005886 ... C1DMA5 38890433
    865747 8rb9:E (3.19) BS01 FES N/A GO:0005886 ... Q9F5Y1 38890433
    865748 8rb9:G (3.19) BS01 FMN N/A GO:0005886 ... C1DMA4 38890433
    865749 8rba:A (1.57) BS01 YLW N/A N/A P04637 39698266
    865750 8rba:A (1.57) BS02 ZN N/A N/A P04637 39698266
    865751 8rba:B (1.57) BS01 YLW N/A N/A P04637 39698266
    865752 8rba:B (1.57) BS02 ZN N/A N/A P04637 39698266
    865753 8rbb:A (1.69) BS01 YLW N/A N/A P04637 39698266
    865754 8rbb:A (1.69) BS02 YLW N/A N/A P04637 39698266
    865755 8rbb:A (1.69) BS03 YLW N/A N/A P04637 39698266
    865756 8rbb:A (1.69) BS04 YLW N/A N/A P04637 39698266
    865757 8rbb:A (1.69) BS05 ZN N/A N/A P04637 39698266
    865758 8rbb:B (1.69) BS01 YLW N/A N/A P04637 39698266
    865759 8rbb:B (1.69) BS02 YLW N/A N/A P04637 39698266
    865760 8rbb:B (1.69) BS03 YLW N/A N/A P04637 39698266
    865761 8rbb:B (1.69) BS04 YLW N/A N/A P04637 39698266
    865762 8rbb:B (1.69) BS05 ZN N/A N/A P04637 39698266
    865763 8rbc:A (2.06) BS01 YM0 N/A N/A P04637 39698266
    865764 8rbc:A (2.06) BS02 ZN N/A N/A P04637 39698266
    865765 8rbc:B (2.06) BS01 YM0 N/A N/A P04637 39698266
    865766 8rbc:B (2.06) BS02 ZN N/A N/A P04637 39698266
    865767 8rbd:A (1.5) BS01 SFG N/A GO:0006629 ... P9WPB1 N/A
    865768 8rbd:A0A0 (1.5) BS01 SFG N/A GO:0006629 ... P9WPB1 N/A
    865769 8rbf:A (4.2) BS01 ADP N/A N/A Q99104 N/A
    865770 8rbf:B (4.2) BS01 ADP N/A GO:0000287 ... P68135 N/A
    865771 8rbf:C (4.2) BS01 ADP N/A GO:0000287 ... P68135 N/A
    865772 8rbf:D (4.2) BS01 ADP N/A GO:0000287 ... P68135 N/A
    865773 8rbg:A (4.9) BS01 MG N/A N/A Q99104 N/A
    865774 8rbg:A (4.9) BS02 ADP N/A N/A Q99104 N/A
    865775 8rbh:A (1.88) BS01 peptide N/A N/A Q53G59 N/A
    865776 8rbh:B (1.88) BS01 peptide N/A N/A Q53G59 N/A
    865777 8rbk:A (3.6) BS01 SAH N/A GO:0005634 ... A5PJT3 N/A
    865778 8rbl:A (1.55) BS01 SAH N/A GO:0006629 ... P9WPB1 N/A
    865779 8rbl:B (1.55) BS01 SAH N/A GO:0006629 ... P9WPB1 N/A
    865780 8rbm:A (3.24) BS01 peptide N/A GO:0005886 ... C1DMA8 38890433
    865781 8rbm:A (3.24) BS02 FES N/A GO:0005886 ... C1DMA8 38890433
    865782 8rbm:C (3.24) BS01 peptide N/A GO:0005886 ... C1DMA6 38890433
    865783 8rbm:C (3.24) BS02 FMN N/A GO:0005886 ... C1DMA6 38890433
    865784 8rbm:C (3.24) BS03 SF4 N/A GO:0005886 ... C1DMA6 38890433
    865785 8rbm:C (3.24) BS04 SF4 N/A GO:0005886 ... C1DMA6 38890433
    865786 8rbm:D (3.24) BS01 RBF N/A GO:0005886 ... C1DMA5 38890433
    865787 8rbm:D (3.24) BS02 FMN N/A GO:0005886 ... C1DMA5 38890433
    865788 8rbm:E (3.24) BS01 FES N/A GO:0005886 ... Q9F5Y1 38890433
    865789 8rbm:G (3.24) BS01 FMN N/A GO:0005886 ... C1DMA4 38890433
    865790 8rbn:A (2.1) BS01 BEM ? GO:0016829 ... A0A7I9C8Z1 N/A
    865791 8rbn:A (2.1) BS02 MAW ? GO:0016829 ... A0A7I9C8Z1 N/A
    865792 8rbn:A (2.1) BS03 BEM ? GO:0016829 ... A0A7I9C8Z1 N/A
    865793 8rbn:A (2.1) BS04 MAV ? GO:0016829 ... A0A7I9C8Z1 N/A
    865794 8rbn:A (2.1) BS05 BEM ? GO:0016829 ... A0A7I9C8Z1 N/A
    865795 8rbo:A (3.02) BS01 ZN 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    865796 8rbo:A (3.02) BS02 ZN 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    865797 8rbo:A (3.02) BS03 MG 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    865798 8rbo:B (3.02) BS01 ZN 2.7.7.6 GO:0000428 ... Q8U0M3 38709902
    865799 8rbo:N (3.02) BS01 ZN 2.7.7.6 GO:0000428 ... P60292 38709902
    865800 8rbo:P (3.02) BS01 ZN 2.7.7.6 GO:0000428 ... Q8TZI3 38709902

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).