SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    865801 8qke:A (1.504) BS02 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865802 8qke:A (1.504) BS03 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865803 8qke:A (1.504) BS04 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865804 8qke:B (1.504) BS01 peptide 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865805 8qke:B (1.504) BS02 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865806 8qke:B (1.504) BS03 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865807 8qke:B (1.504) BS04 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865808 8qkg:A (1.538) BS01 peptide 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865809 8qkg:A (1.538) BS02 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865810 8qkg:A (1.538) BS03 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865811 8qkg:A (1.538) BS04 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865812 8qkg:B (1.538) BS01 peptide 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865813 8qkg:B (1.538) BS02 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865814 8qkg:B (1.538) BS03 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865815 8qkg:B (1.538) BS04 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865816 8qkh:A (4.15) BS01 ZN N/A GO:0046872 ... A1YTN7 41507424
    865817 8qki:A (3.46) BS01 CLR N/A GO:0005243 ... P08034 39739741
    865818 8qki:A (3.46) BS02 CLR N/A GO:0005243 ... P08034 39739741
    865819 8qki:B (3.46) BS01 CLR N/A GO:0005243 ... P08034 39739741
    865820 8qki:C (3.46) BS01 CLR N/A GO:0005243 ... P08034 39739741
    865821 8qki:D (3.46) BS01 CLR N/A GO:0005243 ... P08034 39739741
    865822 8qki:E (3.46) BS01 CLR N/A GO:0005243 ... P08034 39739741
    865823 8qki:F (3.46) BS01 CLR N/A GO:0005243 ... P08034 39739741
    865824 8qkj:A (1.767) BS01 peptide 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865825 8qkj:A (1.767) BS02 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865826 8qkj:A (1.767) BS03 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865827 8qkj:A (1.767) BS04 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865828 8qkj:B (1.767) BS01 peptide 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865829 8qkj:B (1.767) BS02 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865830 8qkj:B (1.767) BS03 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865831 8qkj:B (1.767) BS04 CA 3.4.21.62 GO:0004252 ... E6Y8B9 38503166
    865832 8qkm:0 (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865833 8qkm:1 (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865834 8qkm:2 (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865835 8qkm:3 (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865836 8qkm:4 (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865837 8qkm:5 (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865838 8qkm:6 (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865839 8qkm:7 (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865840 8qkm:A (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865841 8qkm:B (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865842 8qkm:C (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865843 8qkm:D (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865844 8qkm:E (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865845 8qkm:F (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865846 8qkm:G (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865847 8qkm:H (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865848 8qkm:I (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865849 8qkm:J (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865850 8qkm:K (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865851 8qkm:L (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865852 8qkm:M (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865853 8qkm:N (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865854 8qkm:O (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865855 8qkm:P (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865856 8qkm:Q (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865857 8qkm:R (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865858 8qkm:S (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865859 8qkm:T (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865860 8qkm:U (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865861 8qkm:V (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865862 8qkm:W (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865863 8qkm:X (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865864 8qkm:Y (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865865 8qkm:Z (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865866 8qkm:a (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865867 8qkm:b (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865868 8qkm:c (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865869 8qkm:d (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865870 8qkm:e (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865871 8qkm:f (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865872 8qkm:g (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865873 8qkm:h (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865874 8qkm:i (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865875 8qkm:j (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865876 8qkm:k (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865877 8qkm:l (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865878 8qkm:m (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865879 8qkm:n (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865880 8qkm:o (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865881 8qkm:p (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865882 8qkm:q (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865883 8qkm:r (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865884 8qkm:s (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865885 8qkm:t (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865886 8qkm:t (2.39) BS02 CA N/A GO:0003723 ... P03606 39214281
    865887 8qkm:u (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865888 8qkm:v (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865889 8qkm:w (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865890 8qkm:w (2.39) BS02 CA N/A GO:0003723 ... P03606 39214281
    865891 8qkm:x (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865892 8qkm:y (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865893 8qkm:z (2.39) BS01 CA N/A GO:0003723 ... P03606 39214281
    865894 8qkt:AAA (3.261) BS01 dna ? GO:0000786 ... P68431 N/A
    865895 8qkt:AAA (3.261) BS02 dna ? GO:0000786 ... P68431 N/A
    865896 8qkt:BBB (3.261) BS01 dna ? GO:0003677 ... A0A8C1JQV0 N/A
    865897 8qkt:BBB (3.261) BS02 dna ? GO:0003677 ... A0A8C1JQV0 N/A
    865898 8qkt:CCC (3.261) BS01 dna ? GO:0000786 ... H2QSF5 N/A
    865899 8qkt:CCC (3.261) BS02 dna ? GO:0000786 ... H2QSF5 N/A
    865900 8qkt:DDD (3.261) BS01 dna ? GO:0000786 ... P06899 N/A
    865901 8qkt:DDD (3.261) BS02 dna ? GO:0000786 ... P06899 N/A
    865902 8qkt:EEE (3.261) BS01 dna ? GO:0000786 ... P68431 N/A
    865903 8qkt:EEE (3.261) BS02 dna ? GO:0000786 ... P68431 N/A
    865904 8qkt:FFF (3.261) BS01 dna ? GO:0003677 ... A0A8C1JQV0 N/A
    865905 8qkt:FFF (3.261) BS02 dna ? GO:0003677 ... A0A8C1JQV0 N/A
    865906 8qkt:GGG (3.261) BS01 dna ? GO:0000786 ... A0A2Y9FT95 N/A
    865907 8qkt:GGG (3.261) BS02 dna ? GO:0000786 ... A0A2Y9FT95 N/A
    865908 8qkt:HHH (3.261) BS01 dna ? GO:0000786 ... P06899 N/A
    865909 8qkt:HHH (3.261) BS02 dna ? GO:0000786 ... P06899 N/A
    865910 8qkt:KKK (3.261) BS01 dna ? GO:0000786 ... P68431 N/A
    865911 8qkt:KKK (3.261) BS02 dna ? GO:0000786 ... P68431 N/A
    865912 8qkt:LLL (3.261) BS01 dna ? GO:0003677 ... A0A8C1JQV0 N/A
    865913 8qkt:LLL (3.261) BS02 dna ? GO:0003677 ... A0A8C1JQV0 N/A
    865914 8qkt:MMM (3.261) BS01 dna ? GO:0000786 ... H2QSF5 N/A
    865915 8qkt:MMM (3.261) BS02 dna ? GO:0000786 ... H2QSF5 N/A
    865916 8qkt:NNN (3.261) BS01 dna ? GO:0000786 ... P06899 N/A
    865917 8qkt:NNN (3.261) BS02 dna ? GO:0000786 ... P06899 N/A
    865918 8qkt:OOO (3.261) BS01 dna ? GO:0000786 ... P68431 N/A
    865919 8qkt:OOO (3.261) BS02 dna ? GO:0000786 ... P68431 N/A
    865920 8qkt:PPP (3.261) BS01 dna ? GO:0003677 ... A0A8C1JQV0 N/A
    865921 8qkt:PPP (3.261) BS02 dna ? GO:0003677 ... A0A8C1JQV0 N/A
    865922 8qkt:QQQ (3.261) BS01 dna ? GO:0000786 ... A0A2Y9FT95 N/A
    865923 8qkt:QQQ (3.261) BS02 dna ? GO:0000786 ... A0A2Y9FT95 N/A
    865924 8qkt:RRR (3.261) BS01 dna ? GO:0000786 ... P06899 N/A
    865925 8qkt:RRR (3.261) BS02 dna ? GO:0000786 ... P06899 N/A
    865926 8qku:A (3.8) BS01 dna N/A GO:0000776 ... P61830 39506114
    865927 8qku:A (3.8) BS02 dna N/A GO:0000776 ... P61830 39506114
    865928 8qku:B (3.8) BS01 dna N/A GO:0000776 ... P61830 39506114
    865929 8qku:B (3.8) BS02 dna N/A GO:0000776 ... P61830 39506114
    865930 8qku:C (3.8) BS01 dna N/A GO:0000786 ... P02309 39506114
    865931 8qku:C (3.8) BS02 dna N/A GO:0000786 ... P02309 39506114
    865932 8qku:D (3.8) BS01 dna N/A GO:0000786 ... P02309 39506114
    865933 8qku:D (3.8) BS02 dna N/A GO:0000786 ... P02309 39506114
    865934 8qku:E (3.8) BS01 dna N/A GO:0000786 ... P04912 39506114
    865935 8qku:E (3.8) BS02 dna N/A GO:0000786 ... P04912 39506114
    865936 8qku:F (3.8) BS01 dna N/A GO:0000786 ... P04912 39506114
    865937 8qku:G (3.8) BS01 dna N/A GO:0000122 ... P02293 39506114
    865938 8qku:G (3.8) BS02 dna N/A GO:0000122 ... P02293 39506114
    865939 8qku:H (3.8) BS01 dna N/A GO:0000122 ... P02293 39506114
    865940 8qku:M (3.8) BS01 dna N/A GO:0000725 ... Q05471 39506114
    865941 8qku:M (3.8) BS02 dna N/A GO:0000725 ... Q05471 39506114
    865942 8qku:M (3.8) BS03 ADP N/A GO:0000725 ... Q05471 39506114
    865943 8qku:M (3.8) BS04 BEF N/A GO:0000725 ... Q05471 39506114
    865944 8qku:R (3.8) BS01 ADP N/A GO:0000785 ... Q12509 39506114
    865945 8qku:R (3.8) BS02 BEF N/A GO:0000785 ... Q12509 39506114
    865946 8qku:S (3.8) BS01 dna N/A GO:0000785 ... Q03433 39506114
    865947 8qku:S (3.8) BS02 ZN N/A GO:0000785 ... Q03433 39506114
    865948 8qku:S (3.8) BS03 ZN N/A GO:0000785 ... Q03433 39506114
    865949 8qku:T (3.8) BS01 ADP N/A GO:0000492 ... Q03940 39506114
    865950 8qku:U (3.8) BS01 ADP N/A GO:0000492 ... Q12464 39506114
    865951 8qku:V (3.8) BS01 ADP N/A GO:0000492 ... Q03940 39506114
    865952 8qku:W (3.8) BS01 ADP N/A GO:0000492 ... Q12464 39506114
    865953 8qku:X (3.8) BS01 ADP N/A GO:0000492 ... Q03940 39506114
    865954 8qku:Y (3.8) BS01 ADP N/A GO:0000492 ... Q12464 39506114
    865955 8qku:Z (3.8) BS01 dna N/A N/A Q03388 39506114
    865956 8qkv:A (4.7) BS01 dna N/A GO:0000776 ... P61830 39506114
    865957 8qkv:A (4.7) BS02 dna N/A GO:0000776 ... P61830 39506114
    865958 8qkv:B (4.7) BS01 dna N/A GO:0000776 ... P61830 39506114
    865959 8qkv:B (4.7) BS02 dna N/A GO:0000776 ... P61830 39506114
    865960 8qkv:C (4.7) BS01 dna N/A GO:0000786 ... P02309 39506114
    865961 8qkv:C (4.7) BS02 dna N/A GO:0000786 ... P02309 39506114
    865962 8qkv:D (4.7) BS01 dna N/A GO:0000786 ... P02309 39506114
    865963 8qkv:D (4.7) BS02 dna N/A GO:0000786 ... P02309 39506114
    865964 8qkv:E (4.7) BS01 dna N/A GO:0000786 ... P04912 39506114
    865965 8qkv:E (4.7) BS02 dna N/A GO:0000786 ... P04912 39506114
    865966 8qkv:F (4.7) BS01 dna N/A GO:0000786 ... P04912 39506114
    865967 8qkv:F (4.7) BS02 dna N/A GO:0000786 ... P04912 39506114
    865968 8qkv:G (4.7) BS01 dna N/A GO:0000122 ... P02293 39506114
    865969 8qkv:G (4.7) BS02 dna N/A GO:0000122 ... P02293 39506114
    865970 8qkv:H (4.7) BS01 dna N/A GO:0000122 ... P02293 39506114
    865971 8qkv:H (4.7) BS02 dna N/A GO:0000122 ... P02293 39506114
    865972 8qkv:M (4.7) BS01 dna N/A GO:0000725 ... Q05471 39506114
    865973 8qkv:M (4.7) BS02 dna N/A GO:0000725 ... Q05471 39506114
    865974 8qkv:M (4.7) BS03 ADP N/A GO:0000725 ... Q05471 39506114
    865975 8qkv:M (4.7) BS04 BEF N/A GO:0000725 ... Q05471 39506114
    865976 8qkv:R (4.7) BS01 ADP N/A GO:0000785 ... Q12509 39506114
    865977 8qkv:R (4.7) BS02 BEF N/A GO:0000785 ... Q12509 39506114
    865978 8qkv:S (4.7) BS01 ZN N/A GO:0000785 ... Q03433 39506114
    865979 8qkv:S (4.7) BS02 ZN N/A GO:0000785 ... Q03433 39506114
    865980 8qkv:T (4.7) BS01 ADP N/A GO:0000492 ... Q03940 39506114
    865981 8qkv:U (4.7) BS01 ADP N/A GO:0000492 ... Q12464 39506114
    865982 8qkv:V (4.7) BS01 ADP N/A GO:0000492 ... Q03940 39506114
    865983 8qkv:V (4.7) BS02 ADP N/A GO:0000492 ... Q03940 39506114
    865984 8qkv:V (4.7) BS03 MG N/A GO:0000492 ... Q03940 39506114
    865985 8qkv:W (4.7) BS01 ADP N/A GO:0000492 ... Q12464 39506114
    865986 8qkv:W (4.7) BS02 MG N/A GO:0000492 ... Q12464 39506114
    865987 8qkv:X (4.7) BS01 ADP N/A GO:0000492 ... Q03940 39506114
    865988 8qkv:X (4.7) BS02 MG N/A GO:0000492 ... Q03940 39506114
    865989 8qkv:Y (4.7) BS01 ADP N/A GO:0000492 ... Q12464 39506114
    865990 8qkv:Y (4.7) BS02 MG N/A GO:0000492 ... Q12464 39506114
    865991 8qkv:Z (4.7) BS01 dna N/A N/A Q03388 39506114
    865992 8qkv:Z (4.7) BS02 dna N/A N/A Q03388 39506114
    865993 8qkw:A (1.65) BS01 VXT N/A GO:0009758 ... A0A2V0R8Q9 40349214
    865994 8qkw:A (1.65) BS02 VXT N/A GO:0009758 ... A0A2V0R8Q9 40349214
    865995 8qkz:AAA (1.34) BS01 ZN N/A GO:0004064 ... P00918 39378331
    865996 8qkz:AAA (1.34) BS02 KIX N/A GO:0004064 ... P00918 39378331
    865997 8ql1:A (2.3) BS01 MG N/A N/A Q9NU22 40207627
    865998 8ql1:C (2.3) BS01 MG N/A N/A Q9NU22 40207627
    865999 8ql1:E (2.3) BS01 MG N/A N/A Q9NU22 40207627
    866000 8ql1:G (2.3) BS01 MG N/A N/A Q9NU22 40207627

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).