SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4321 4322 4323 4324 4325 4326 4327 4328 4329 4330 4331 4332 4333 4334 4335 4336 4337 4338 4339 4340 4341 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    866001 8ql2:A (1.7) BS01 GTP N/A GO:0000226 ... P81947 N/A
    866002 8ql2:A (1.7) BS02 CA N/A GO:0000226 ... P81947 N/A
    866003 8ql2:A (1.7) BS03 IBL N/A GO:0000226 ... P81947 N/A
    866004 8ql2:B (1.7) BS01 IBL N/A GO:0000226 ... Q6B856 N/A
    866005 8ql2:B (1.7) BS02 GTP N/A GO:0000226 ... Q6B856 N/A
    866006 8ql3:A (1.8) BS01 GTP N/A GO:0000226 ... P81947 N/A
    866007 8ql3:A (1.8) BS02 CA N/A GO:0000226 ... P81947 N/A
    866008 8ql3:A (1.8) BS03 IBL N/A GO:0000226 ... P81947 N/A
    866009 8ql3:B (1.8) BS01 GTP N/A GO:0000226 ... Q6B856 N/A
    866010 8ql3:B (1.8) BS02 IBL N/A GO:0000226 ... Q6B856 N/A
    866011 8ql4:A (1.8) BS01 GTP N/A GO:0000226 ... P81947 N/A
    866012 8ql4:A (1.8) BS02 CA N/A GO:0000226 ... P81947 N/A
    866013 8ql4:A (1.8) BS03 IBL N/A GO:0000226 ... P81947 N/A
    866014 8ql4:B (1.8) BS01 GTP N/A GO:0000226 ... Q6B856 N/A
    866015 8ql4:B (1.8) BS02 IBL N/A GO:0000226 ... Q6B856 N/A
    866016 8ql5:A (1.8) BS01 GTP N/A GO:0000226 ... P81947 N/A
    866017 8ql5:A (1.8) BS02 CA N/A GO:0000226 ... P81947 N/A
    866018 8ql5:A (1.8) BS03 IBL N/A GO:0000226 ... P81947 N/A
    866019 8ql5:B (1.8) BS01 GTP N/A GO:0000226 ... Q6B856 N/A
    866020 8ql5:B (1.8) BS02 IBL N/A GO:0000226 ... Q6B856 N/A
    866021 8ql6:A (1.8) BS01 GTP N/A GO:0000226 ... P81947 N/A
    866022 8ql6:A (1.8) BS02 CA N/A GO:0000226 ... P81947 N/A
    866023 8ql6:A (1.8) BS03 VYT N/A GO:0000226 ... P81947 N/A
    866024 8ql6:B (1.8) BS01 GTP N/A GO:0000226 ... Q6B856 N/A
    866025 8ql6:B (1.8) BS02 VYT N/A GO:0000226 ... Q6B856 N/A
    866026 8ql7:A (1.8) BS01 GTP N/A GO:0000226 ... P81947 N/A
    866027 8ql7:A (1.8) BS02 CA N/A GO:0000226 ... P81947 N/A
    866028 8ql7:A (1.8) BS03 VYT N/A GO:0000226 ... P81947 N/A
    866029 8ql7:B (1.8) BS01 GTP N/A GO:0000226 ... Q6B856 N/A
    866030 8ql7:B (1.8) BS02 VYT N/A GO:0000226 ... Q6B856 N/A
    866031 8ql8:A (1.8) BS01 GTP N/A GO:0000226 ... P81947 N/A
    866032 8ql8:A (1.8) BS02 CA N/A GO:0000226 ... P81947 N/A
    866033 8ql8:A (1.8) BS03 VYT N/A GO:0000226 ... P81947 N/A
    866034 8ql8:B (1.8) BS01 GDP N/A GO:0000226 ... Q6B856 N/A
    866035 8ql8:B (1.8) BS02 VYT N/A GO:0000226 ... Q6B856 N/A
    866036 8ql9:A (1.8) BS01 GTP N/A GO:0000226 ... P81947 N/A
    866037 8ql9:A (1.8) BS02 CA N/A GO:0000226 ... P81947 N/A
    866038 8ql9:A (1.8) BS03 IBL N/A GO:0000226 ... P81947 N/A
    866039 8ql9:B (1.8) BS01 GDP N/A GO:0000226 ... Q6B856 N/A
    866040 8ql9:B (1.8) BS02 IBL N/A GO:0000226 ... Q6B856 N/A
    866041 8qla:A (1.8) BS01 GTP N/A GO:0000226 ... P81947 N/A
    866042 8qla:A (1.8) BS02 CA N/A GO:0000226 ... P81947 N/A
    866043 8qla:A (1.8) BS03 IBL N/A GO:0000226 ... P81947 N/A
    866044 8qla:B (1.8) BS01 GDP N/A GO:0000226 ... Q6B856 N/A
    866045 8qla:B (1.8) BS02 IBL N/A GO:0000226 ... Q6B856 N/A
    866046 8qlb:A (1.8) BS01 GTP N/A GO:0000226 ... P81947 N/A
    866047 8qlb:A (1.8) BS02 CA N/A GO:0000226 ... P81947 N/A
    866048 8qlb:A (1.8) BS03 VYT N/A GO:0000226 ... P81947 N/A
    866049 8qlb:B (1.8) BS01 GDP N/A GO:0000226 ... Q6B856 N/A
    866050 8qlb:B (1.8) BS02 VYT N/A GO:0000226 ... Q6B856 N/A
    866051 8qlg:A (2.1) BS01 peptide ? GO:0005886 ... H2BJN6 38838057
    866052 8qlg:A (2.1) BS02 ZN ? GO:0005886 ... H2BJN6 38838057
    866053 8qlg:A (2.1) BS03 ZN ? GO:0005886 ... H2BJN6 38838057
    866054 8qlg:A (2.1) BS04 ZN ? GO:0005886 ... H2BJN6 38838057
    866055 8qlg:B (2.1) BS01 peptide ? GO:0005886 ... H2BJN6 38838057
    866056 8qlg:B (2.1) BS02 ZN ? GO:0005886 ... H2BJN6 38838057
    866057 8qlg:B (2.1) BS03 ZN ? GO:0005886 ... H2BJN6 38838057
    866058 8qlg:B (2.1) BS04 ZN ? GO:0005886 ... H2BJN6 38838057
    866059 8qli:A (1.12) BS01 BEM N/A N/A A0A7I9C8Z1 40102416
    866060 8qli:A (1.12) BS02 BEM N/A N/A A0A7I9C8Z1 40102416
    866061 8qli:A (1.12) BS03 BEM N/A N/A A0A7I9C8Z1 40102416
    866062 8qli:A (1.12) BS04 BEM N/A N/A A0A7I9C8Z1 40102416
    866063 8qlj:A (1.65) BS01 peptide ? GO:0005886 ... P0A4G1 38838057
    866064 8qlk:A (2.29) BS01 peptide ? GO:0005886 ... P0A4G1 38838057
    866065 8qll:A (2.4) BS01 GSH N/A GO:0004364 ... Q9Z339 38441878
    866066 8qll:B (2.4) BS01 GSH N/A GO:0004364 ... Q9Z339 38441878
    866067 8qlm:A (1.66) BS01 peptide ? GO:0005886 ... P0A4G1 38838057
    866068 8qlm:B (1.66) BS01 peptide ? GO:0005886 ... P0A4G1 38838057
    866069 8qln:A (2.51) BS01 TEW N/A GO:0019068 ... P16784 N/A
    866070 8qlp:A (3.14) BS01 rna N/A GO:0007165 ... A0AAN0NP98 38224450
    866071 8qlp:A (3.14) BS02 dna N/A GO:0007165 ... A0AAN0NP98 38224450
    866072 8qlp:B (3.14) BS01 rna N/A GO:0003676 ... N/A 38224450
    866073 8qlp:B (3.14) BS02 dna N/A GO:0003676 ... N/A 38224450
    866074 8qlp:B (3.14) BS03 MG N/A GO:0003676 ... N/A 38224450
    866075 8qlp:E (3.14) BS01 rna N/A GO:0007165 ... A0AAN0NP98 38224450
    866076 8qlp:E (3.14) BS02 dna N/A GO:0007165 ... A0AAN0NP98 38224450
    866077 8qlp:F (3.14) BS01 rna N/A GO:0003676 ... N/A 38224450
    866078 8qlp:F (3.14) BS02 dna N/A GO:0003676 ... N/A 38224450
    866079 8qlp:F (3.14) BS03 MG N/A GO:0003676 ... N/A 38224450
    866080 8qlp:I (3.14) BS01 rna N/A GO:0007165 ... A0AAN0NP98 38224450
    866081 8qlp:I (3.14) BS02 dna N/A GO:0007165 ... A0AAN0NP98 38224450
    866082 8qlp:J (3.14) BS01 rna N/A GO:0003676 ... N/A 38224450
    866083 8qlp:J (3.14) BS02 dna N/A GO:0003676 ... N/A 38224450
    866084 8qlp:J (3.14) BS03 MG N/A GO:0003676 ... N/A 38224450
    866085 8qlp:M (3.14) BS01 rna N/A GO:0007165 ... A0AAN0NP98 38224450
    866086 8qlp:M (3.14) BS02 dna N/A GO:0007165 ... A0AAN0NP98 38224450
    866087 8qlp:N (3.14) BS01 rna N/A GO:0003676 ... N/A 38224450
    866088 8qlp:N (3.14) BS02 dna N/A GO:0003676 ... N/A 38224450
    866089 8qlp:N (3.14) BS03 MG N/A GO:0003676 ... N/A 38224450
    866090 8qlq:A (1.64) BS01 VY0 2.7.11.1 GO:0004672 ... Q9Y6E0 38126712
    866091 8qlr:A (1.85) BS01 VYN 2.7.11.1 GO:0004672 ... Q9Y6E0 38422480
    866092 8qlr:B (1.85) BS01 VYN 2.7.11.1 GO:0004672 ... Q9Y6E0 38422480
    866093 8qls:A (1.61) BS01 VYH 2.7.11.1 GO:0004672 ... Q9Y6E0 38422480
    866094 8qlt:A (1.47) BS01 VZ2 2.7.11.1 GO:0004672 ... Q9Y6E0 38422480
    866095 8qlv:A (1.49) BS01 peptide ? GO:0005886 ... P0A4G1 38838057
    866096 8qm0:A (1.76) BS01 peptide ? GO:0043190 ... P18791 38838057
    866097 8qm0:B (1.76) BS01 peptide ? GO:0043190 ... P18791 38838057
    866098 8qm0:C (1.76) BS01 peptide ? GO:0043190 ... P18791 38838057
    866099 8qm0:D (1.76) BS01 peptide ? GO:0043190 ... P18791 38838057
    866100 8qm1:A (1.91) BS01 CER 2.3.1.179 GO:0004315 ... G3XDA2 40233425
    866101 8qm1:B (1.91) BS01 CER 2.3.1.179 GO:0004315 ... G3XDA2 40233425
    866102 8qm3:A (1.53) BS01 402 1.12.7.2 GO:0005506 ... P29166 37983562
    866103 8qm3:A (1.53) BS02 SF4 1.12.7.2 GO:0005506 ... P29166 37983562
    866104 8qm3:A (1.53) BS03 SF4 1.12.7.2 GO:0005506 ... P29166 37983562
    866105 8qm3:A (1.53) BS04 SF4 1.12.7.2 GO:0005506 ... P29166 37983562
    866106 8qm3:A (1.53) BS05 SF4 1.12.7.2 GO:0005506 ... P29166 37983562
    866107 8qm3:A (1.53) BS06 FES 1.12.7.2 GO:0005506 ... P29166 37983562
    866108 8qm3:A (1.53) BS07 MG 1.12.7.2 GO:0005506 ... P29166 37983562
    866109 8qm3:B (1.53) BS01 402 1.12.7.2 GO:0005506 ... P29166 37983562
    866110 8qm3:B (1.53) BS02 SF4 1.12.7.2 GO:0005506 ... P29166 37983562
    866111 8qm3:B (1.53) BS03 SF4 1.12.7.2 GO:0005506 ... P29166 37983562
    866112 8qm3:B (1.53) BS04 SF4 1.12.7.2 GO:0005506 ... P29166 37983562
    866113 8qm3:B (1.53) BS05 SF4 1.12.7.2 GO:0005506 ... P29166 37983562
    866114 8qm3:B (1.53) BS06 FES 1.12.7.2 GO:0005506 ... P29166 37983562
    866115 8qm3:B (1.53) BS07 MG 1.12.7.2 GO:0005506 ... P29166 37983562
    866116 8qm4:A (1.849) BS01 W5B N/A GO:0003723 ... P06730 40016190
    866117 8qm4:B (1.849) BS01 W5B N/A GO:0003723 ... P06730 40016190
    866118 8qm5:A (1.889) BS01 W4U N/A GO:0003723 ... P06730 40016190
    866119 8qm5:B (1.889) BS01 W4U N/A GO:0003723 ... P06730 40016190
    866120 8qm6:A (1.93) BS01 W2N N/A GO:0003723 ... P06730 40016190
    866121 8qm6:A (1.93) BS02 W4B N/A GO:0003723 ... P06730 40016190
    866122 8qm6:B (1.93) BS01 W4B N/A GO:0003723 ... P06730 40016190
    866123 8qm6:B (1.93) BS02 W2N N/A GO:0003723 ... P06730 40016190
    866124 8qm7:A (2.191) BS01 W5K N/A GO:0003723 ... P06730 40016190
    866125 8qm7:B (2.191) BS01 W5K N/A GO:0003723 ... P06730 40016190
    866126 8qm8:A (1.585) BS01 W4K N/A GO:0003723 ... P06730 40016190
    866127 8qm8:B (1.585) BS01 W4K N/A GO:0003723 ... P06730 40016190
    866128 8qm9:A (1.973) BS01 W4K N/A GO:0003723 ... P06730 40016190
    866129 8qm9:B (1.973) BS01 W4K N/A GO:0003723 ... P06730 40016190
    866130 8qma:B (3.5) BS01 ZN 2.7.7.6 GO:0003677 ... A0A6C0M829 38428434
    866131 8qma:G (3.5) BS01 FE N/A GO:0004784 ... N/A 38428434
    866132 8qma:J (3.5) BS01 SAM N/A N/A N/A 38428434
    866133 8qma:L (3.5) BS01 FE N/A GO:0004784 ... N/A 38428434
    866134 8qmb:A (2.0) BS01 dna N/A GO:0003677 ... P72525
    Q59961
    40595483
    866135 8qmb:A (2.0) BS02 dna N/A GO:0003677 ... P72525
    Q59961
    40595483
    866136 8qmb:A (2.0) BS03 dna N/A GO:0003677 ... P72525
    Q59961
    40595483
    866137 8qmb:A (2.0) BS04 MG N/A GO:0003677 ... P72525
    Q59961
    40595483
    866138 8qmb:A (2.0) BS05 MG N/A GO:0003677 ... P72525
    Q59961
    40595483
    866139 8qmb:A (2.0) BS06 TE9 N/A GO:0003677 ... P72525
    Q59961
    40595483
    866140 8qmb:B (2.0) BS01 dna N/A GO:0003677 ... P72525
    Q59961
    40595483
    866141 8qmb:B (2.0) BS02 dna N/A GO:0003677 ... P72525
    Q59961
    40595483
    866142 8qmb:B (2.0) BS03 dna N/A GO:0003677 ... P72525
    Q59961
    40595483
    866143 8qmb:B (2.0) BS04 MG N/A GO:0003677 ... P72525
    Q59961
    40595483
    866144 8qmb:B (2.0) BS05 MG N/A GO:0003677 ... P72525
    Q59961
    40595483
    866145 8qmb:B (2.0) BS06 TE9 N/A GO:0003677 ... P72525
    Q59961
    40595483
    866146 8qmc:A (2.402) BS01 dna N/A GO:0003677 ... P72525 40595483
    866147 8qmc:A (2.402) BS02 dna N/A GO:0003677 ... P72525 40595483
    866148 8qmc:A (2.402) BS03 dna N/A GO:0003677 ... P72525 40595483
    866149 8qmc:A (2.402) BS04 MG N/A GO:0003677 ... P72525 40595483
    866150 8qmc:A (2.402) BS05 MG N/A GO:0003677 ... P72525 40595483
    866151 8qmc:A (2.402) BS06 TE9 N/A GO:0003677 ... P72525 40595483
    866152 8qmc:B (2.402) BS01 dna N/A GO:0003677 ... P72525 40595483
    866153 8qmc:B (2.402) BS02 dna N/A GO:0003677 ... P72525 40595483
    866154 8qmc:B (2.402) BS03 dna N/A GO:0003677 ... P72525 40595483
    866155 8qmc:B (2.402) BS04 MG N/A GO:0003677 ... P72525 40595483
    866156 8qmc:B (2.402) BS05 MG N/A GO:0003677 ... P72525 40595483
    866157 8qmc:B (2.402) BS06 TE9 N/A GO:0003677 ... P72525 40595483
    866158 8qmf:A (2.1) BS01 TPP 2.2.1.1 GO:0004802 ... Q7MDD4 38145310
    866159 8qmf:A (2.1) BS02 MG 2.2.1.1 GO:0004802 ... Q7MDD4 38145310
    866160 8qmf:A (2.1) BS03 TPP 2.2.1.1 GO:0004802 ... Q7MDD4 38145310
    866161 8qmf:B (2.1) BS01 TPP 2.2.1.1 GO:0004802 ... Q7MDD4 38145310
    866162 8qmf:B (2.1) BS02 TPP 2.2.1.1 GO:0004802 ... Q7MDD4 38145310
    866163 8qmf:B (2.1) BS03 MG 2.2.1.1 GO:0004802 ... Q7MDD4 38145310
    866164 8qmg:A (2.3) BS01 ZN ? N/A Q94EW1 39437181
    866165 8qmg:B (2.3) BS01 ZN ? N/A Q94EW1 39437181
    866166 8qmg:C (2.3) BS01 ZN ? N/A Q94EW1 39437181
    866167 8qmg:D (2.3) BS01 ZN ? N/A Q94EW1 39437181
    866168 8qmg:F (2.3) BS01 ZN ? N/A Q94EW1 39437181
    866169 8qmg:F (2.3) BS02 ZN ? N/A Q94EW1 39437181
    866170 8qmg:G (2.3) BS01 ZN ? N/A Q94EW1 39437181
    866171 8qmj:A (0.98) BS01 MAV N/A N/A A0A7I9C8Z1 40102416
    866172 8qmj:A (0.98) BS02 BEM N/A N/A A0A7I9C8Z1 40102416
    866173 8qmj:A (0.98) BS03 BEM N/A N/A A0A7I9C8Z1 40102416
    866174 8qmk:A (1.3) BS01 CMO 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866175 8qmk:A (1.3) BS02 CYN 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866176 8qmk:A (1.3) BS03 SF4 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866177 8qmk:A (1.3) BS04 SAH 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866178 8qmk:A (1.3) BS05 CYS 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866179 8qml:A (1.4) BS01 SAH 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866180 8qml:A (1.4) BS02 41K 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866181 8qml:A (1.4) BS03 SF4 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866182 8qmm:A (1.2) BS01 SAH 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866183 8qmm:A (1.2) BS02 SF4 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866184 8qmn:A (1.48) BS01 SAH 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866185 8qmn:A (1.48) BS02 SF4 1.8.-.- GO:0003824 ... Q9X0Z6 37962296
    866186 8qmo:A (2.76) BS01 MOO ? GO:0003723 ... P08238 38135181
    866187 8qmo:A (2.76) BS02 ADP ? GO:0003723 ... P08238 38135181
    866188 8qmo:B (2.76) BS01 MOO ? GO:0003723 ... P08238 38135181
    866189 8qmo:B (2.76) BS02 ADP ? GO:0003723 ... P08238 38135181
    866190 8qmo:D (2.76) BS01 W62 ? GO:0006355 ... P35869 38135181
    866191 8qmp:A (3.3) BS01 MG N/A GO:0000166 ... Q9LF79 39168442
    866192 8qmp:A (3.3) BS02 BEF N/A GO:0000166 ... Q9LF79 39168442
    866193 8qmq:A (1.7) BS01 NAD N/A GO:0004030 ... P76149 39406738
    866194 8qmq:B (1.7) BS01 NAD N/A GO:0004030 ... P76149 39406738
    866195 8qmq:C (1.7) BS01 NAD N/A GO:0004030 ... P76149 39406738
    866196 8qmq:D (1.7) BS01 NAD N/A GO:0004030 ... P76149 39406738
    866197 8qmr:A (2.3) BS01 NAD N/A GO:0004030 ... P76149 39406738
    866198 8qmr:A (2.3) BS02 SSN N/A GO:0004030 ... P76149 39406738
    866199 8qmr:B (2.3) BS01 NAD N/A GO:0004030 ... P76149 39406738
    866200 8qmr:B (2.3) BS02 SSN N/A GO:0004030 ... P76149 39406738

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).