SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    866001 8rcf:D (3.4) BS03 ATP N/A GO:0000150 ... Q06609 39178838
    866002 8rcf:D (3.4) BS04 CA N/A GO:0000150 ... Q06609 39178838
    866003 8rcf:D (3.4) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    866004 8rcf:E (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    866005 8rcf:E (3.4) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    866006 8rcf:E (3.4) BS03 CA N/A GO:0000150 ... Q06609 39178838
    866007 8rcf:E (3.4) BS04 ATP N/A GO:0000150 ... Q06609 39178838
    866008 8rcf:F (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    866009 8rcf:F (3.4) BS02 dna N/A GO:0000150 ... Q06609 39178838
    866010 8rcf:F (3.4) BS03 ATP N/A GO:0000150 ... Q06609 39178838
    866011 8rcf:F (3.4) BS04 CA N/A GO:0000150 ... Q06609 39178838
    866012 8rcf:F (3.4) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    866013 8rcf:G (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    866014 8rcf:G (3.4) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    866015 8rcf:G (3.4) BS03 CA N/A GO:0000150 ... Q06609 39178838
    866016 8rcf:G (3.4) BS04 CA N/A GO:0000150 ... Q06609 39178838
    866017 8rcf:G (3.4) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    866018 8rcf:H (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    866019 8rcf:H (3.4) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    866020 8rcf:H (3.4) BS03 CA N/A GO:0000150 ... Q06609 39178838
    866021 8rcg:A (2.005) BS01 MGD 1.2.1.2 GO:0005515 ... Q72EJ1 38699971
    866022 8rcg:A (2.005) BS02 MGD 1.2.1.2 GO:0005515 ... Q72EJ1 38699971
    866023 8rcg:A (2.005) BS03 SF4 1.2.1.2 GO:0005515 ... Q72EJ1 38699971
    866024 8rcg:B (2.005) BS01 SF4 ? GO:0030313 ... Q72EJ0 38699971
    866025 8rcg:B (2.005) BS02 SF4 ? GO:0030313 ... Q72EJ0 38699971
    866026 8rcg:B (2.005) BS03 SF4 ? GO:0030313 ... Q72EJ0 38699971
    866027 8rch:A (4.0) BS01 ANP N/A GO:0000139 ... P42345 N/A
    866028 8rch:A (4.0) BS02 MG N/A GO:0000139 ... P42345 N/A
    866029 8rch:B (4.0) BS01 ANP N/A GO:0000139 ... P42345 N/A
    866030 8rch:B (4.0) BS02 MG N/A GO:0000139 ... P42345 N/A
    866031 8rch:W (4.0) BS01 peptide N/A GO:0001558 ... Q8N122 N/A
    866032 8rch:Y (4.0) BS01 peptide N/A GO:0001558 ... Q8N122 N/A
    866033 8rci:A (1.5) BS01 ZN N/A N/A P04637 N/A
    866034 8rck:B (3.4) BS01 ANP N/A GO:0000139 ... P42345 N/A
    866035 8rck:B (3.4) BS02 MG N/A GO:0000139 ... P42345 N/A
    866036 8rck:Y (3.4) BS01 peptide N/A GO:0001558 ... Q8N122 N/A
    866037 8rcl:12 (3.49) BS01 rna ? GO:0000027 ... P0A7M2 38409277
    866038 8rcl:32 (3.49) BS01 rna ? GO:0000027 ... P0AG51 38409277
    866039 8rcl:32 (3.49) BS02 rna ? GO:0000027 ... P0AG51 38409277
    866040 8rcl:4 (3.49) BS01 rna ? GO:0002181 ... P0A7M9 38409277
    866041 8rcl:4 (3.49) BS02 rna ? GO:0002181 ... P0A7M9 38409277
    866042 8rcl:4 (3.49) BS03 ZN ? GO:0002181 ... P0A7M9 38409277
    866043 8rcl:62 (3.49) BS01 rna ? GO:0002181 ... P0A7Q1 38409277
    866044 8rcl:B (3.49) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    866045 8rcl:B (3.49) BS02 peptide ? GO:0000028 ... P0A7V0 38409277
    866046 8rcl:B (3.49) BS03 ZN ? GO:0000028 ... P0A7V0 38409277
    866047 8rcl:B2 (3.49) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    866048 8rcl:C1 (3.49) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    866049 8rcl:C1 (3.49) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    866050 8rcl:C2 (3.49) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    866051 8rcl:C2 (3.49) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    866052 8rcl:D1 (3.49) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    866053 8rcl:D2 (3.49) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    866054 8rcl:E1 (3.49) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    866055 8rcl:E1 (3.49) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    866056 8rcl:E2 (3.49) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    866057 8rcl:E2 (3.49) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    866058 8rcl:F1 (3.49) BS01 rna ? GO:0002181 ... P02358 38409277
    866059 8rcl:F2 (3.49) BS01 rna ? GO:0002181 ... P02358 38409277
    866060 8rcl:G1 (3.49) BS01 rna ? GO:0000028 ... P02359 38409277
    866061 8rcl:G1 (3.49) BS02 rna ? GO:0000028 ... P02359 38409277
    866062 8rcl:G2 (3.49) BS01 rna ? GO:0000028 ... P02359 38409277
    866063 8rcl:G2 (3.49) BS02 rna ? GO:0000028 ... P02359 38409277
    866064 8rcl:G2 (3.49) BS03 rna ? GO:0000028 ... P02359 38409277
    866065 8rcl:H1 (3.49) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    866066 8rcl:H2 (3.49) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    866067 8rcl:I1 (3.49) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    866068 8rcl:I1 (3.49) BS02 rna ? GO:0000049 ... P0A7X3 38409277
    866069 8rcl:I2 (3.49) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    866070 8rcl:I2 (3.49) BS02 rna ? GO:0000049 ... P0A7X3 38409277
    866071 8rcl:J1 (3.49) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    866072 8rcl:J2 (3.49) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    866073 8rcl:K1 (3.49) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    866074 8rcl:K2 (3.49) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    866075 8rcl:L1 (3.49) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    866076 8rcl:L2 (3.49) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    866077 8rcl:M1 (3.49) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    866078 8rcl:M2 (3.49) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    866079 8rcl:M2 (3.49) BS02 rna ? GO:0000049 ... P0A7S9 38409277
    866080 8rcl:N1 (3.49) BS01 rna ? GO:0000028 ... P0AG59 38409277
    866081 8rcl:N2 (3.49) BS01 rna ? GO:0000028 ... P0AG59 38409277
    866082 8rcl:O1 (3.49) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    866083 8rcl:O2 (3.49) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    866084 8rcl:O2 (3.49) BS02 rna ? GO:0000028 ... P0ADZ4 38409277
    866085 8rcl:P1 (3.49) BS01 rna ? GO:0000028 ... P0A7T3 38409277
    866086 8rcl:Q1 (3.49) BS01 rna ? GO:0000028 ... P0AG63 38409277
    866087 8rcl:Q2 (3.49) BS01 rna ? GO:0000028 ... P0AG63 38409277
    866088 8rcl:R1 (3.49) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    866089 8rcl:R2 (3.49) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    866090 8rcl:S1 (3.49) BS01 rna ? GO:0000028 ... P0A7U3 38409277
    866091 8rcl:S2 (3.49) BS01 rna ? GO:0000028 ... P0A7U3 38409277
    866092 8rcl:T1 (3.49) BS01 rna ? GO:0000028 ... P0A7U7 38409277
    866093 8rcl:U1 (3.49) BS01 rna ? GO:0000028 ... P68679 38409277
    866094 8rcl:U1 (3.49) BS02 rna ? GO:0000028 ... P68679 38409277
    866095 8rcl:U2 (3.49) BS01 rna ? GO:0000028 ... P68679 38409277
    866096 8rcl:U2 (3.49) BS02 rna ? GO:0000028 ... P68679 38409277
    866097 8rcl:a2 (3.49) BS01 rna ? GO:0000027 ... P0A7L0 38409277
    866098 8rcl:b2 (3.49) BS01 rna ? GO:0000027 ... P60422 38409277
    866099 8rcl:b2 (3.49) BS02 rna ? GO:0000027 ... P60422 38409277
    866100 8rcl:e2 (3.49) BS01 rna ? GO:0000027 ... P62399 38409277
    866101 8rcl:e2 (3.49) BS02 rna ? GO:0000027 ... P62399 38409277
    866102 8rcl:e2 (3.49) BS03 rna ? GO:0000027 ... P62399 38409277
    866103 8rcl:g2 (3.49) BS01 rna ? GO:0000027 ... P0A7N9 38409277
    866104 8rcl:h2 (3.49) BS01 rna ? GO:0000027 ... P0ADY7 38409277
    866105 8rcl:h2 (3.49) BS02 rna ? GO:0000027 ... P0ADY7 38409277
    866106 8rcl:i2 (3.49) BS01 rna ? GO:0002181 ... P0A7R1 38409277
    866107 8rcl:i2 (3.49) BS02 rna ? GO:0002181 ... P0A7R1 38409277
    866108 8rcl:l2 (3.49) BS01 rna ? GO:0002181 ... P0A7P5 38409277
    866109 8rcl:o2 (3.49) BS01 rna ? GO:0002181 ... P02413 38409277
    866110 8rcl:o2 (3.49) BS02 MG ? GO:0002181 ... P02413 38409277
    866111 8rcl:r2 (3.49) BS01 rna ? GO:0002181 ... P0C018 38409277
    866112 8rcl:r2 (3.49) BS02 rna ? GO:0002181 ... P0C018 38409277
    866113 8rcl:z2 (3.49) BS01 rna ? GO:0000027 ... P0A7L8 38409277
    866114 8rcm:12 (3.59) BS01 rna ? GO:0000027 ... P0A7M2 38409277
    866115 8rcm:32 (3.59) BS01 rna ? GO:0000027 ... P0AG51 38409277
    866116 8rcm:32 (3.59) BS02 rna ? GO:0000027 ... P0AG51 38409277
    866117 8rcm:4 (3.59) BS01 rna ? GO:0002181 ... P0A7M9 38409277
    866118 8rcm:4 (3.59) BS02 rna ? GO:0002181 ... P0A7M9 38409277
    866119 8rcm:4 (3.59) BS03 ZN ? GO:0002181 ... P0A7M9 38409277
    866120 8rcm:62 (3.59) BS01 rna ? GO:0002181 ... P0A7Q1 38409277
    866121 8rcm:B (3.59) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    866122 8rcm:B2 (3.59) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    866123 8rcm:C1 (3.59) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    866124 8rcm:C1 (3.59) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    866125 8rcm:C2 (3.59) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    866126 8rcm:C2 (3.59) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    866127 8rcm:D1 (3.59) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    866128 8rcm:D1 (3.59) BS02 rna ? GO:0000028 ... P0A7V8 38409277
    866129 8rcm:D2 (3.59) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    866130 8rcm:E1 (3.59) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    866131 8rcm:E1 (3.59) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    866132 8rcm:E2 (3.59) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    866133 8rcm:E2 (3.59) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    866134 8rcm:F1 (3.59) BS01 rna ? GO:0002181 ... P02358 38409277
    866135 8rcm:F2 (3.59) BS01 rna ? GO:0002181 ... P02358 38409277
    866136 8rcm:G1 (3.59) BS01 rna ? GO:0000028 ... P02359 38409277
    866137 8rcm:G1 (3.59) BS02 rna ? GO:0000028 ... P02359 38409277
    866138 8rcm:G2 (3.59) BS01 rna ? GO:0000028 ... P02359 38409277
    866139 8rcm:G2 (3.59) BS02 rna ? GO:0000028 ... P02359 38409277
    866140 8rcm:G2 (3.59) BS03 rna ? GO:0000028 ... P02359 38409277
    866141 8rcm:H1 (3.59) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    866142 8rcm:H2 (3.59) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    866143 8rcm:I1 (3.59) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    866144 8rcm:I1 (3.59) BS02 rna ? GO:0000049 ... P0A7X3 38409277
    866145 8rcm:I2 (3.59) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    866146 8rcm:I2 (3.59) BS02 rna ? GO:0000049 ... P0A7X3 38409277
    866147 8rcm:J1 (3.59) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    866148 8rcm:J2 (3.59) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    866149 8rcm:K1 (3.59) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    866150 8rcm:K2 (3.59) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    866151 8rcm:L1 (3.59) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    866152 8rcm:L2 (3.59) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    866153 8rcm:M1 (3.59) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    866154 8rcm:M2 (3.59) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    866155 8rcm:M2 (3.59) BS02 rna ? GO:0000049 ... P0A7S9 38409277
    866156 8rcm:N1 (3.59) BS01 rna ? GO:0000028 ... P0AG59 38409277
    866157 8rcm:N2 (3.59) BS01 rna ? GO:0000028 ... P0AG59 38409277
    866158 8rcm:O1 (3.59) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    866159 8rcm:O2 (3.59) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    866160 8rcm:O2 (3.59) BS02 rna ? GO:0000028 ... P0ADZ4 38409277
    866161 8rcm:P1 (3.59) BS01 rna ? GO:0000028 ... P0A7T3 38409277
    866162 8rcm:Q1 (3.59) BS01 rna ? GO:0000028 ... P0AG63 38409277
    866163 8rcm:Q2 (3.59) BS01 rna ? GO:0000028 ... P0AG63 38409277
    866164 8rcm:R1 (3.59) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    866165 8rcm:R2 (3.59) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    866166 8rcm:S1 (3.59) BS01 rna ? GO:0000028 ... P0A7U3 38409277
    866167 8rcm:S2 (3.59) BS01 rna ? GO:0000028 ... P0A7U3 38409277
    866168 8rcm:T1 (3.59) BS01 rna ? GO:0000028 ... P0A7U7 38409277
    866169 8rcm:U1 (3.59) BS01 rna ? GO:0000028 ... P68679 38409277
    866170 8rcm:U1 (3.59) BS02 rna ? GO:0000028 ... P68679 38409277
    866171 8rcm:U2 (3.59) BS01 rna ? GO:0000028 ... P68679 38409277
    866172 8rcm:U2 (3.59) BS02 rna ? GO:0000028 ... P68679 38409277
    866173 8rcm:a2 (3.59) BS01 rna ? GO:0000027 ... P0A7L0 38409277
    866174 8rcm:b2 (3.59) BS01 rna ? GO:0000027 ... P60422 38409277
    866175 8rcm:b2 (3.59) BS02 rna ? GO:0000027 ... P60422 38409277
    866176 8rcm:e2 (3.59) BS01 rna ? GO:0000027 ... P62399 38409277
    866177 8rcm:e2 (3.59) BS02 rna ? GO:0000027 ... P62399 38409277
    866178 8rcm:e2 (3.59) BS03 rna ? GO:0000027 ... P62399 38409277
    866179 8rcm:g2 (3.59) BS01 rna ? GO:0000027 ... P0A7N9 38409277
    866180 8rcm:h2 (3.59) BS01 rna ? GO:0000027 ... P0ADY7 38409277
    866181 8rcm:h2 (3.59) BS02 rna ? GO:0000027 ... P0ADY7 38409277
    866182 8rcm:i2 (3.59) BS01 rna ? GO:0002181 ... P0A7R1 38409277
    866183 8rcm:i2 (3.59) BS02 rna ? GO:0002181 ... P0A7R1 38409277
    866184 8rcm:l2 (3.59) BS01 rna ? GO:0002181 ... P0A7P5 38409277
    866185 8rcm:o2 (3.59) BS01 rna ? GO:0002181 ... P02413 38409277
    866186 8rcm:r2 (3.59) BS01 rna ? GO:0002181 ... P0C018 38409277
    866187 8rcm:r2 (3.59) BS02 rna ? GO:0002181 ... P0C018 38409277
    866188 8rcm:z2 (3.59) BS01 rna ? GO:0000027 ... P0A7L8 38409277
    866189 8rcm:z2 (3.59) BS02 rna ? GO:0000027 ... P0A7L8 38409277
    866190 8rcn:B (3.1) BS01 ANP N/A GO:0000139 ... P42345 N/A
    866191 8rcn:B (3.1) BS02 MG N/A GO:0000139 ... P42345 N/A
    866192 8rcn:Y (3.1) BS01 peptide N/A GO:0001558 ... Q8N122 N/A
    866193 8rco:A (1.9) BS01 MYR N/A GO:0005615 ... P02768 38782206
    866194 8rco:A (1.9) BS02 MYR N/A GO:0005615 ... P02768 38782206
    866195 8rco:A (1.9) BS03 MYR N/A GO:0005615 ... P02768 38782206
    866196 8rco:A (1.9) BS04 MYR N/A GO:0005615 ... P02768 38782206
    866197 8rco:A (1.9) BS05 MYR N/A GO:0005615 ... P02768 38782206
    866198 8rco:A (1.9) BS06 MYR N/A GO:0005615 ... P02768 38782206
    866199 8rco:A (1.9) BS07 GOR N/A GO:0005615 ... P02768 38782206
    866200 8rco:A (1.9) BS08 GOR N/A GO:0005615 ... P02768 38782206

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).