SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    866201 8rco:B (1.9) BS01 MYR N/A GO:0005615 ... P02768 38782206
    866202 8rco:B (1.9) BS02 MYR N/A GO:0005615 ... P02768 38782206
    866203 8rco:B (1.9) BS03 MYR N/A GO:0005615 ... P02768 38782206
    866204 8rco:B (1.9) BS04 MYR N/A GO:0005615 ... P02768 38782206
    866205 8rco:B (1.9) BS05 MYR N/A GO:0005615 ... P02768 38782206
    866206 8rco:B (1.9) BS06 GOR N/A GO:0005615 ... P02768 38782206
    866207 8rco:B (1.9) BS07 GOR N/A GO:0005615 ... P02768 38782206
    866208 8rcr:A (3.6) BS01 CLR N/A N/A Q8TD43 39828793
    866209 8rcr:A (3.6) BS02 CLR N/A N/A Q8TD43 39828793
    866210 8rcr:A (3.6) BS03 CLR N/A N/A Q8TD43 39828793
    866211 8rcr:A (3.6) BS04 CLR N/A N/A Q8TD43 39828793
    866212 8rcr:B (3.6) BS01 CLR N/A N/A Q8TD43 39828793
    866213 8rcr:B (3.6) BS02 CLR N/A N/A Q8TD43 39828793
    866214 8rcr:B (3.6) BS03 CLR N/A N/A Q8TD43 39828793
    866215 8rcr:C (3.6) BS01 CLR N/A N/A Q8TD43 39828793
    866216 8rcr:C (3.6) BS02 CLR N/A N/A Q8TD43 39828793
    866217 8rcr:C (3.6) BS03 CLR N/A N/A Q8TD43 39828793
    866218 8rcr:C (3.6) BS04 CLR N/A N/A Q8TD43 39828793
    866219 8rcr:D (3.6) BS01 CLR N/A N/A Q8TD43 39828793
    866220 8rcr:D (3.6) BS02 CLR N/A N/A Q8TD43 39828793
    866221 8rcs:12 (4.46) BS01 rna ? GO:0000027 ... P0A7M2 38409277
    866222 8rcs:12 (4.46) BS02 rna ? GO:0000027 ... P0A7M2 38409277
    866223 8rcs:32 (4.46) BS01 rna ? GO:0000027 ... P0AG51 38409277
    866224 8rcs:4 (4.46) BS01 rna ? GO:0002181 ... P0A7M9 38409277
    866225 8rcs:4 (4.46) BS02 rna ? GO:0002181 ... P0A7M9 38409277
    866226 8rcs:62 (4.46) BS01 rna ? GO:0002181 ... P0A7Q1 38409277
    866227 8rcs:B (4.46) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    866228 8rcs:B (4.46) BS02 rna ? GO:0000028 ... P0A7V0 38409277
    866229 8rcs:B (4.46) BS03 peptide ? GO:0000028 ... P0A7V0 38409277
    866230 8rcs:B (4.46) BS04 ZN ? GO:0000028 ... P0A7V0 38409277
    866231 8rcs:B2 (4.46) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    866232 8rcs:C1 (4.46) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    866233 8rcs:C1 (4.46) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    866234 8rcs:C2 (4.46) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    866235 8rcs:D1 (4.46) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    866236 8rcs:D2 (4.46) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    866237 8rcs:E1 (4.46) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    866238 8rcs:E1 (4.46) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    866239 8rcs:E2 (4.46) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    866240 8rcs:E2 (4.46) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    866241 8rcs:F1 (4.46) BS01 rna ? GO:0002181 ... P02358 38409277
    866242 8rcs:F2 (4.46) BS01 rna ? GO:0002181 ... P02358 38409277
    866243 8rcs:G1 (4.46) BS01 rna ? GO:0000028 ... P02359 38409277
    866244 8rcs:G2 (4.46) BS01 rna ? GO:0000028 ... P02359 38409277
    866245 8rcs:G2 (4.46) BS02 rna ? GO:0000028 ... P02359 38409277
    866246 8rcs:H1 (4.46) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    866247 8rcs:H2 (4.46) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    866248 8rcs:I1 (4.46) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    866249 8rcs:I2 (4.46) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    866250 8rcs:I2 (4.46) BS02 rna ? GO:0000049 ... P0A7X3 38409277
    866251 8rcs:J1 (4.46) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    866252 8rcs:J2 (4.46) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    866253 8rcs:K1 (4.46) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    866254 8rcs:K2 (4.46) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    866255 8rcs:L1 (4.46) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    866256 8rcs:L2 (4.46) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    866257 8rcs:M1 (4.46) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    866258 8rcs:M2 (4.46) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    866259 8rcs:N1 (4.46) BS01 peptide ? GO:0000028 ... P0AG59 38409277
    866260 8rcs:N1 (4.46) BS02 rna ? GO:0000028 ... P0AG59 38409277
    866261 8rcs:N2 (4.46) BS01 rna ? GO:0000028 ... P0AG59 38409277
    866262 8rcs:O1 (4.46) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    866263 8rcs:O2 (4.46) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    866264 8rcs:O2 (4.46) BS02 rna ? GO:0000028 ... P0ADZ4 38409277
    866265 8rcs:P1 (4.46) BS01 rna ? GO:0000028 ... P0A7T3 38409277
    866266 8rcs:Q1 (4.46) BS01 rna ? GO:0000028 ... P0AG63 38409277
    866267 8rcs:Q2 (4.46) BS01 rna ? GO:0000028 ... P0AG63 38409277
    866268 8rcs:R1 (4.46) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    866269 8rcs:R2 (4.46) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    866270 8rcs:S1 (4.46) BS01 peptide ? GO:0000028 ... P0A7U3 38409277
    866271 8rcs:S1 (4.46) BS02 rna ? GO:0000028 ... P0A7U3 38409277
    866272 8rcs:S2 (4.46) BS01 rna ? GO:0000028 ... P0A7U3 38409277
    866273 8rcs:T1 (4.46) BS01 rna ? GO:0000028 ... P0A7U7 38409277
    866274 8rcs:U1 (4.46) BS01 rna ? GO:0000028 ... P68679 38409277
    866275 8rcs:U1 (4.46) BS02 rna ? GO:0000028 ... P68679 38409277
    866276 8rcs:U2 (4.46) BS01 rna ? GO:0000028 ... P68679 38409277
    866277 8rcs:U2 (4.46) BS02 rna ? GO:0000028 ... P68679 38409277
    866278 8rcs:a2 (4.46) BS01 rna ? GO:0000027 ... P0A7L0 38409277
    866279 8rcs:b2 (4.46) BS01 rna ? GO:0000027 ... P60422 38409277
    866280 8rcs:b2 (4.46) BS02 rna ? GO:0000027 ... P60422 38409277
    866281 8rcs:e2 (4.46) BS01 rna ? GO:0000027 ... P62399 38409277
    866282 8rcs:e2 (4.46) BS02 rna ? GO:0000027 ... P62399 38409277
    866283 8rcs:g2 (4.46) BS01 rna ? GO:0000027 ... P0A7N9 38409277
    866284 8rcs:h2 (4.46) BS01 rna ? GO:0000027 ... P0ADY7 38409277
    866285 8rcs:h2 (4.46) BS02 rna ? GO:0000027 ... P0ADY7 38409277
    866286 8rcs:i2 (4.46) BS01 rna ? GO:0002181 ... P0A7R1 38409277
    866287 8rcs:i2 (4.46) BS02 rna ? GO:0002181 ... P0A7R1 38409277
    866288 8rcs:l2 (4.46) BS01 rna ? GO:0002181 ... P0A7P5 38409277
    866289 8rcs:o2 (4.46) BS01 rna ? GO:0002181 ... P02413 38409277
    866290 8rcs:o2 (4.46) BS02 MG ? GO:0002181 ... P02413 38409277
    866291 8rcs:r2 (4.46) BS01 rna ? GO:0002181 ... P0C018 38409277
    866292 8rcs:r2 (4.46) BS02 rna ? GO:0002181 ... P0C018 38409277
    866293 8rcs:z2 (4.46) BS01 rna ? GO:0000027 ... P0A7L8 38409277
    866294 8rcs:z2 (4.46) BS02 rna ? GO:0000027 ... P0A7L8 38409277
    866295 8rct:12 (5.32) BS01 rna ? GO:0000027 ... P0A7M2 38409277
    866296 8rct:12 (5.32) BS02 rna ? GO:0000027 ... P0A7M2 38409277
    866297 8rct:32 (5.32) BS01 rna ? GO:0000027 ... P0AG51 38409277
    866298 8rct:32 (5.32) BS02 rna ? GO:0000027 ... P0AG51 38409277
    866299 8rct:4 (5.32) BS01 rna ? GO:0002181 ... P0A7M9 38409277
    866300 8rct:4 (5.32) BS02 rna ? GO:0002181 ... P0A7M9 38409277
    866301 8rct:4 (5.32) BS03 ZN ? GO:0002181 ... P0A7M9 38409277
    866302 8rct:62 (5.32) BS01 rna ? GO:0002181 ... P0A7Q1 38409277
    866303 8rct:B (5.32) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    866304 8rct:B (5.32) BS02 peptide ? GO:0000028 ... P0A7V0 38409277
    866305 8rct:B (5.32) BS03 ZN ? GO:0000028 ... P0A7V0 38409277
    866306 8rct:B2 (5.32) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    866307 8rct:C1 (5.32) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    866308 8rct:C1 (5.32) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    866309 8rct:C2 (5.32) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    866310 8rct:D1 (5.32) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    866311 8rct:D2 (5.32) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    866312 8rct:E1 (5.32) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    866313 8rct:E1 (5.32) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    866314 8rct:E2 (5.32) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    866315 8rct:E2 (5.32) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    866316 8rct:F1 (5.32) BS01 rna ? GO:0002181 ... P02358 38409277
    866317 8rct:F2 (5.32) BS01 rna ? GO:0002181 ... P02358 38409277
    866318 8rct:G1 (5.32) BS01 rna ? GO:0000028 ... P02359 38409277
    866319 8rct:G2 (5.32) BS01 rna ? GO:0000028 ... P02359 38409277
    866320 8rct:G2 (5.32) BS02 rna ? GO:0000028 ... P02359 38409277
    866321 8rct:H1 (5.32) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    866322 8rct:H2 (5.32) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    866323 8rct:I1 (5.32) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    866324 8rct:I2 (5.32) BS01 rna ? GO:0000049 ... P0A7X3 38409277
    866325 8rct:I2 (5.32) BS02 rna ? GO:0000049 ... P0A7X3 38409277
    866326 8rct:J1 (5.32) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    866327 8rct:J2 (5.32) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    866328 8rct:K1 (5.32) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    866329 8rct:K2 (5.32) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    866330 8rct:L1 (5.32) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    866331 8rct:L2 (5.32) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    866332 8rct:M1 (5.32) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    866333 8rct:M2 (5.32) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    866334 8rct:N1 (5.32) BS01 peptide ? GO:0000028 ... P0AG59 38409277
    866335 8rct:N1 (5.32) BS02 rna ? GO:0000028 ... P0AG59 38409277
    866336 8rct:N2 (5.32) BS01 rna ? GO:0000028 ... P0AG59 38409277
    866337 8rct:O1 (5.32) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    866338 8rct:O2 (5.32) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    866339 8rct:O2 (5.32) BS02 rna ? GO:0000028 ... P0ADZ4 38409277
    866340 8rct:P1 (5.32) BS01 rna ? GO:0000028 ... P0A7T3 38409277
    866341 8rct:Q1 (5.32) BS01 rna ? GO:0000028 ... P0AG63 38409277
    866342 8rct:Q2 (5.32) BS01 rna ? GO:0000028 ... P0AG63 38409277
    866343 8rct:R1 (5.32) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    866344 8rct:R2 (5.32) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    866345 8rct:S1 (5.32) BS01 peptide ? GO:0000028 ... P0A7U3 38409277
    866346 8rct:S1 (5.32) BS02 rna ? GO:0000028 ... P0A7U3 38409277
    866347 8rct:S2 (5.32) BS01 rna ? GO:0000028 ... P0A7U3 38409277
    866348 8rct:T1 (5.32) BS01 rna ? GO:0000028 ... P0A7U7 38409277
    866349 8rct:U1 (5.32) BS01 rna ? GO:0000028 ... P68679 38409277
    866350 8rct:U1 (5.32) BS02 rna ? GO:0000028 ... P68679 38409277
    866351 8rct:U2 (5.32) BS01 rna ? GO:0000028 ... P68679 38409277
    866352 8rct:U2 (5.32) BS02 rna ? GO:0000028 ... P68679 38409277
    866353 8rct:a2 (5.32) BS01 rna ? GO:0000027 ... P0A7L0 38409277
    866354 8rct:b2 (5.32) BS01 rna ? GO:0000027 ... P60422 38409277
    866355 8rct:b2 (5.32) BS02 rna ? GO:0000027 ... P60422 38409277
    866356 8rct:e2 (5.32) BS01 rna ? GO:0000027 ... P62399 38409277
    866357 8rct:e2 (5.32) BS02 rna ? GO:0000027 ... P62399 38409277
    866358 8rct:g2 (5.32) BS01 rna ? GO:0000027 ... P0A7N9 38409277
    866359 8rct:h2 (5.32) BS01 rna ? GO:0000027 ... P0ADY7 38409277
    866360 8rct:h2 (5.32) BS02 rna ? GO:0000027 ... P0ADY7 38409277
    866361 8rct:i2 (5.32) BS01 rna ? GO:0002181 ... P0A7R1 38409277
    866362 8rct:i2 (5.32) BS02 rna ? GO:0002181 ... P0A7R1 38409277
    866363 8rct:l2 (5.32) BS01 rna ? GO:0002181 ... P0A7P5 38409277
    866364 8rct:o2 (5.32) BS01 rna ? GO:0002181 ... P02413 38409277
    866365 8rct:o2 (5.32) BS02 MG ? GO:0002181 ... P02413 38409277
    866366 8rct:r2 (5.32) BS01 rna ? GO:0002181 ... P0C018 38409277
    866367 8rct:r2 (5.32) BS02 rna ? GO:0002181 ... P0C018 38409277
    866368 8rct:z2 (5.32) BS01 rna ? GO:0000027 ... P0A7L8 38409277
    866369 8rct:z2 (5.32) BS02 rna ? GO:0000027 ... P0A7L8 38409277
    866370 8rcu:A (3.5) BS01 CLR N/A N/A Q8TD43 39828793
    866371 8rcu:A (3.5) BS02 CLR N/A N/A Q8TD43 39828793
    866372 8rcu:A (3.5) BS03 CLR N/A N/A Q8TD43 39828793
    866373 8rcu:A (3.5) BS04 CLR N/A N/A Q8TD43 39828793
    866374 8rcu:B (3.5) BS01 CLR N/A N/A Q8TD43 39828793
    866375 8rcu:B (3.5) BS02 CLR N/A N/A Q8TD43 39828793
    866376 8rcu:C (3.5) BS01 CLR N/A N/A Q8TD43 39828793
    866377 8rcu:D (3.5) BS01 CLR N/A N/A Q8TD43 39828793
    866378 8rcu:D (3.5) BS02 CLR N/A N/A Q8TD43 39828793
    866379 8rcu:D (3.5) BS03 CLR N/A N/A Q8TD43 39828793
    866380 8rcv:A (1.65) BS01 peptide ? GO:0006955 ... C5IYE8 38742159
    866381 8rcw:A (1.692) BS01 YQF ? N/A P9WMJ3 38548139
    866382 8rcw:B (1.692) BS01 YQF ? N/A P9WMJ3 38548139
    866383 8rcy:A (1.8) BS01 CA N/A N/A Q9H2X3 39246372
    866384 8rcy:A (1.8) BS02 A1H0Q N/A N/A Q9H2X3 39246372
    866385 8rcz:A (2.25) BS01 NAI N/A GO:0004318 ... Q9HZP8 N/A
    866386 8rcz:B (2.25) BS01 NAI N/A GO:0004318 ... Q9HZP8 N/A
    866387 8rd0:C (1.765) BS01 51X N/A N/A Q7Z6Z7 39048679
    866388 8rd0:D (1.765) BS01 51X N/A N/A Q7Z6Z7 39048679
    866389 8rd1:A (1.896) BS01 YP2 N/A N/A Q7Z6Z7 39048679
    866390 8rd1:C (1.896) BS01 YP2 N/A N/A Q7Z6Z7 39048679
    866391 8rd1:D (1.896) BS01 YP2 N/A N/A Q7Z6Z7 39048679
    866392 8rd5:A (1.5) BS01 6NT N/A GO:0004553 ... P23360 39261644
    866393 8rd5:B (1.5) BS01 6NT N/A GO:0004553 ... P23360 39261644
    866394 8rd7:D (1.31) BS01 AR6 N/A N/A Q7Z6Z7 39048679
    866395 8rd8:A4 (2.62) BS01 rna ? GO:0003735 ... A0A0M4TFJ4 38355796
    866396 8rd8:Af (2.62) BS01 rna ? GO:0003735 ... A0A0M4T1M3 38355796
    866397 8rd8:B (2.62) BS01 rna ? N/A A0A0M3V8U3 38355796
    866398 8rd8:B (2.62) BS02 rna ? N/A A0A0M3V8U3 38355796
    866399 8rd8:BQ (2.62) BS01 rna ? GO:0003735 ... A0A0M4U618 38355796
    866400 8rd8:Ba (2.62) BS01 rna ? GO:0003735 ... A0A0M4TEZ6 38355796

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).