SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    867201 8rgk:B (1.9) BS05 MYR N/A GO:0005615 ... P02768 38782206
    867202 8rgk:B (1.9) BS06 MYR N/A GO:0005615 ... P02768 38782206
    867203 8rgk:B (1.9) BS07 MYR N/A GO:0005615 ... P02768 38782206
    867204 8rgl:A (1.9) BS01 MYR N/A GO:0005615 ... P02768 38782206
    867205 8rgl:A (1.9) BS02 MYR N/A GO:0005615 ... P02768 38782206
    867206 8rgl:A (1.9) BS03 MYR N/A GO:0005615 ... P02768 38782206
    867207 8rgl:A (1.9) BS04 MYR N/A GO:0005615 ... P02768 38782206
    867208 8rgl:A (1.9) BS05 MYR N/A GO:0005615 ... P02768 38782206
    867209 8rgl:A (1.9) BS06 MYR N/A GO:0005615 ... P02768 38782206
    867210 8rgl:A (1.9) BS07 GOQ N/A GO:0005615 ... P02768 38782206
    867211 8rgl:B (1.9) BS01 MYR N/A GO:0005615 ... P02768 38782206
    867212 8rgl:B (1.9) BS02 MYR N/A GO:0005615 ... P02768 38782206
    867213 8rgl:B (1.9) BS03 MYR N/A GO:0005615 ... P02768 38782206
    867214 8rgl:B (1.9) BS04 MYR N/A GO:0005615 ... P02768 38782206
    867215 8rgl:B (1.9) BS05 MYR N/A GO:0005615 ... P02768 38782206
    867216 8rgl:B (1.9) BS06 MYR N/A GO:0005615 ... P02768 38782206
    867217 8rgl:B (1.9) BS07 GOQ N/A GO:0005615 ... P02768 38782206
    867218 8rgm:A (4.0) BS01 dna N/A N/A P68431 N/A
    867219 8rgm:A (4.0) BS02 dna N/A N/A P68431 N/A
    867220 8rgm:B (4.0) BS01 dna N/A N/A P62805 N/A
    867221 8rgm:B (4.0) BS02 dna N/A N/A P62805 N/A
    867222 8rgm:C (4.0) BS01 dna N/A N/A P04908 N/A
    867223 8rgm:C (4.0) BS02 dna N/A N/A P04908 N/A
    867224 8rgm:D (4.0) BS01 dna N/A N/A P06899 N/A
    867225 8rgm:D (4.0) BS02 dna N/A N/A P06899 N/A
    867226 8rgm:E (4.0) BS01 dna N/A N/A P68431 N/A
    867227 8rgm:E (4.0) BS02 dna N/A N/A P68431 N/A
    867228 8rgm:F (4.0) BS01 dna N/A N/A P62805 N/A
    867229 8rgm:F (4.0) BS02 dna N/A N/A P62805 N/A
    867230 8rgm:G (4.0) BS01 dna N/A N/A P04908 N/A
    867231 8rgm:G (4.0) BS02 dna N/A N/A P04908 N/A
    867232 8rgm:H (4.0) BS01 dna N/A N/A P06899 N/A
    867233 8rgm:H (4.0) BS02 dna N/A N/A P06899 N/A
    867234 8rgn:A (3.7) BS01 ATP N/A N/A O06967 N/A
    867235 8rgn:A (3.7) BS02 ATP N/A N/A O06967 N/A
    867236 8rgn:B (3.7) BS01 ATP N/A N/A O06967 N/A
    867237 8rgn:B (3.7) BS02 ATP N/A N/A O06967 N/A
    867238 8rgp:1 (3.0) BS01 FMN 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    867239 8rgp:1 (3.0) BS02 SF4 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    867240 8rgp:2 (3.0) BS01 FES 7.1.1.2 GO:0005739 ... Q9D6J6 38575788
    867241 8rgp:3 (3.0) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867242 8rgp:3 (3.0) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867243 8rgp:3 (3.0) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867244 8rgp:6 (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    867245 8rgp:6 (3.0) BS02 UQ 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    867246 8rgp:7 (3.0) BS01 ZN ? GO:0001822 ... P52503 38575788
    867247 8rgp:9 (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    867248 8rgp:9 (3.0) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    867249 8rgp:D (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    867250 8rgp:D (3.0) BS02 UQ 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    867251 8rgp:H (3.0) BS01 UQ 7.1.1.2 GO:0001666 ... P03888 38575788
    867252 8rgp:O (3.0) BS01 DGT ? GO:0005739 ... Q99LC3 38575788
    867253 8rgp:P (3.0) BS01 NDP ? GO:0003954 ... Q9DC69 38575788
    867254 8rgp:W (3.0) BS01 ZMP ? GO:0003674 ... Q9CQZ5 38575788
    867255 8rgp:n (3.0) BS01 ZMP ? GO:0005739 ... Q9CQJ8 38575788
    867256 8rgq:1 (3.0) BS01 FMN 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    867257 8rgq:1 (3.0) BS02 SF4 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    867258 8rgq:2 (3.0) BS01 FES 7.1.1.2 GO:0005739 ... Q9D6J6 38575788
    867259 8rgq:3 (3.0) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867260 8rgq:3 (3.0) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867261 8rgq:3 (3.0) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867262 8rgq:6 (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    867263 8rgq:7 (3.0) BS01 ZN ? GO:0001822 ... P52503 38575788
    867264 8rgq:9 (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    867265 8rgq:9 (3.0) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    867266 8rgq:D (3.0) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    867267 8rgq:O (3.0) BS01 DGT ? GO:0005739 ... Q99LC3 38575788
    867268 8rgq:P (3.0) BS01 NDP ? GO:0003954 ... Q9DC69 38575788
    867269 8rgq:W (3.0) BS01 ZMP ? GO:0003674 ... Q9CQZ5 38575788
    867270 8rgq:n (3.0) BS01 ZMP ? GO:0005739 ... Q9CQJ8 38575788
    867271 8rgr:1 (2.9) BS01 FMN 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    867272 8rgr:1 (2.9) BS02 SF4 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    867273 8rgr:2 (2.9) BS01 FES 7.1.1.2 GO:0005739 ... Q9D6J6 38575788
    867274 8rgr:3 (2.9) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867275 8rgr:3 (2.9) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867276 8rgr:3 (2.9) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867277 8rgr:6 (2.9) BS01 SF4 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    867278 8rgr:6 (2.9) BS02 UQ 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    867279 8rgr:7 (2.9) BS01 ZN ? GO:0001822 ... P52503 38575788
    867280 8rgr:9 (2.9) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    867281 8rgr:9 (2.9) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    867282 8rgr:D (2.9) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    867283 8rgr:D (2.9) BS02 UQ 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    867284 8rgr:H (2.9) BS01 UQ 7.1.1.2 GO:0001666 ... P03888 38575788
    867285 8rgr:O (2.9) BS01 DGT ? GO:0005739 ... Q99LC3 38575788
    867286 8rgr:P (2.9) BS01 NDP ? GO:0003954 ... Q9DC69 38575788
    867287 8rgr:W (2.9) BS01 ZMP ? GO:0003674 ... Q9CQZ5 38575788
    867288 8rgr:n (2.9) BS01 ZMP ? GO:0005739 ... Q9CQJ8 38575788
    867289 8rgs:A (1.79) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    867290 8rgs:B (1.79) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    867291 8rgt:1 (3.1) BS01 FMN 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    867292 8rgt:1 (3.1) BS02 SF4 7.1.1.2 GO:0005515 ... Q91YT0 38575788
    867293 8rgt:2 (3.1) BS01 FES 7.1.1.2 GO:0005739 ... Q9D6J6 38575788
    867294 8rgt:3 (3.1) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867295 8rgt:3 (3.1) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867296 8rgt:3 (3.1) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 38575788
    867297 8rgt:6 (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... Q9DC70 38575788
    867298 8rgt:7 (3.1) BS01 ZN ? GO:0001822 ... P52503 38575788
    867299 8rgt:9 (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    867300 8rgt:9 (3.1) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 38575788
    867301 8rgt:D (3.1) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 38575788
    867302 8rgt:O (3.1) BS01 DGT ? GO:0005739 ... Q99LC3 38575788
    867303 8rgt:P (3.1) BS01 NDP ? GO:0003954 ... Q9DC69 38575788
    867304 8rgt:T (3.1) BS01 ZMP ? GO:0005654 ... Q9CR21 38575788
    867305 8rgt:W (3.1) BS01 ZMP ? GO:0003674 ... Q9CQZ5 38575788
    867306 8rgt:n (3.1) BS01 ZMP ? GO:0005739 ... Q9CQJ8 38575788
    867307 8rgu:A (1.9) BS01 MN N/A GO:0000050 ... P78540 39572889
    867308 8rgu:A (1.9) BS02 MN N/A GO:0000050 ... P78540 39572889
    867309 8rgu:A (1.9) BS03 PRO N/A GO:0000050 ... P78540 39572889
    867310 8rgu:B (1.9) BS01 MN N/A GO:0000050 ... P78540 39572889
    867311 8rgu:B (1.9) BS02 MN N/A GO:0000050 ... P78540 39572889
    867312 8rgu:B (1.9) BS03 PRO N/A GO:0000050 ... P78540 39572889
    867313 8rgu:C (1.9) BS01 MN N/A GO:0000050 ... P78540 39572889
    867314 8rgu:C (1.9) BS02 MN N/A GO:0000050 ... P78540 39572889
    867315 8rgu:C (1.9) BS03 PRO N/A GO:0000050 ... P78540 39572889
    867316 8rgw:A (1.88) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    867317 8rgw:B (1.88) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    867318 8rgy:A (2.07) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    867319 8rgy:B (2.07) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004601 ... A0A7U9DT46 38488731
    867320 8rh3:A (1.96) BS01 A1H0F ? GO:0009159 ... K9TVX3 38449528
    867321 8rh3:B (1.96) BS01 A1H0F ? GO:0009159 ... K9TVX3 38449528
    867322 8rh3:B (1.96) BS02 A1H0F ? GO:0009159 ... K9TVX3 38449528
    867323 8rh3:C (1.96) BS01 A1H0F ? GO:0009159 ... K9TVX3 38449528
    867324 8rh3:D (1.96) BS01 A1H0F ? GO:0009159 ... K9TVX3 38449528
    867325 8rh4:A (2.52) BS01 EST N/A GO:0004888 ... P24046 N/A
    867326 8rh4:A (2.52) BS02 EST N/A GO:0004888 ... P24046 N/A
    867327 8rh4:B (2.52) BS01 EST N/A GO:0004888 ... P24046 N/A
    867328 8rh4:B (2.52) BS02 EST N/A GO:0004888 ... P24046 N/A
    867329 8rh4:C (2.52) BS01 EST N/A GO:0004888 ... P24046 N/A
    867330 8rh4:C (2.52) BS02 EST N/A GO:0004888 ... P24046 N/A
    867331 8rh4:D (2.52) BS01 EST N/A GO:0004888 ... P24046 N/A
    867332 8rh4:D (2.52) BS02 EST N/A GO:0004888 ... P24046 N/A
    867333 8rh4:E (2.52) BS01 EST N/A GO:0004888 ... P24046 N/A
    867334 8rh4:E (2.52) BS02 EST N/A GO:0004888 ... P24046 N/A
    867335 8rh5:A (2.54) BS01 GAL N/A N/A A0AAX4NFB8 N/A
    867336 8rh5:A (2.54) BS02 GAL N/A N/A A0AAX4NFB8 N/A
    867337 8rh5:A (2.54) BS03 GAL N/A N/A A0AAX4NFB8 N/A
    867338 8rh5:A (2.54) BS04 GAL N/A N/A A0AAX4NFB8 N/A
    867339 8rh5:A (2.54) BS05 GAL N/A N/A A0AAX4NFB8 N/A
    867340 8rh5:A (2.54) BS06 BGC N/A N/A A0AAX4NFB8 N/A
    867341 8rh5:A (2.54) BS07 GAL N/A N/A A0AAX4NFB8 N/A
    867342 8rh5:A (2.54) BS08 BGC N/A N/A A0AAX4NFB8 N/A
    867343 8rh5:A (2.54) BS09 GAL N/A N/A A0AAX4NFB8 N/A
    867344 8rh5:B (2.54) BS01 GAL N/A N/A A0AAX4NFB8 N/A
    867345 8rh5:B (2.54) BS02 GAL N/A N/A A0AAX4NFB8 N/A
    867346 8rh5:B (2.54) BS03 GAL N/A N/A A0AAX4NFB8 N/A
    867347 8rh5:B (2.54) BS04 GAL N/A N/A A0AAX4NFB8 N/A
    867348 8rh5:B (2.54) BS05 GAL N/A N/A A0AAX4NFB8 N/A
    867349 8rh5:B (2.54) BS06 BGC N/A N/A A0AAX4NFB8 N/A
    867350 8rh5:B (2.54) BS07 GAL N/A N/A A0AAX4NFB8 N/A
    867351 8rh5:B (2.54) BS08 BGC N/A N/A A0AAX4NFB8 N/A
    867352 8rh5:B (2.54) BS09 GAL N/A N/A A0AAX4NFB8 N/A
    867353 8rh5:C (2.54) BS01 GAL N/A N/A A0AAX4NFB8 N/A
    867354 8rh5:C (2.54) BS02 GAL N/A N/A A0AAX4NFB8 N/A
    867355 8rh5:C (2.54) BS03 GAL N/A N/A A0AAX4NFB8 N/A
    867356 8rh5:C (2.54) BS04 GAL N/A N/A A0AAX4NFB8 N/A
    867357 8rh5:C (2.54) BS05 GAL N/A N/A A0AAX4NFB8 N/A
    867358 8rh5:C (2.54) BS06 BGC N/A N/A A0AAX4NFB8 N/A
    867359 8rh5:C (2.54) BS07 GAL N/A N/A A0AAX4NFB8 N/A
    867360 8rh5:C (2.54) BS08 BGC N/A N/A A0AAX4NFB8 N/A
    867361 8rh5:C (2.54) BS09 GAL N/A N/A A0AAX4NFB8 N/A
    867362 8rh5:D (2.54) BS01 GAL N/A N/A A0AAX4NFB8 N/A
    867363 8rh5:D (2.54) BS02 GAL N/A N/A A0AAX4NFB8 N/A
    867364 8rh5:D (2.54) BS03 GAL N/A N/A A0AAX4NFB8 N/A
    867365 8rh5:D (2.54) BS04 GAL N/A N/A A0AAX4NFB8 N/A
    867366 8rh5:D (2.54) BS05 GAL N/A N/A A0AAX4NFB8 N/A
    867367 8rh5:D (2.54) BS06 BGC N/A N/A A0AAX4NFB8 N/A
    867368 8rh5:D (2.54) BS07 GAL N/A N/A A0AAX4NFB8 N/A
    867369 8rh5:D (2.54) BS08 BGC N/A N/A A0AAX4NFB8 N/A
    867370 8rh5:D (2.54) BS09 GAL N/A N/A A0AAX4NFB8 N/A
    867371 8rh5:E (2.54) BS01 GAL N/A N/A A0AAX4NFB8 N/A
    867372 8rh5:E (2.54) BS02 GAL N/A N/A A0AAX4NFB8 N/A
    867373 8rh5:E (2.54) BS03 GAL N/A N/A A0AAX4NFB8 N/A
    867374 8rh5:E (2.54) BS04 GAL N/A N/A A0AAX4NFB8 N/A
    867375 8rh5:E (2.54) BS05 GAL N/A N/A A0AAX4NFB8 N/A
    867376 8rh5:E (2.54) BS06 BGC N/A N/A A0AAX4NFB8 N/A
    867377 8rh5:E (2.54) BS07 GAL N/A N/A A0AAX4NFB8 N/A
    867378 8rh5:E (2.54) BS08 BGC N/A N/A A0AAX4NFB8 N/A
    867379 8rh5:E (2.54) BS09 GAL N/A N/A A0AAX4NFB8 N/A
    867380 8rh5:F (2.54) BS01 GAL N/A N/A A0AAX4NFB8 N/A
    867381 8rh5:F (2.54) BS02 GAL N/A N/A A0AAX4NFB8 N/A
    867382 8rh5:F (2.54) BS03 GAL N/A N/A A0AAX4NFB8 N/A
    867383 8rh5:F (2.54) BS04 GAL N/A N/A A0AAX4NFB8 N/A
    867384 8rh5:F (2.54) BS05 GAL N/A N/A A0AAX4NFB8 N/A
    867385 8rh5:F (2.54) BS06 BGC N/A N/A A0AAX4NFB8 N/A
    867386 8rh5:F (2.54) BS07 GAL N/A N/A A0AAX4NFB8 N/A
    867387 8rh5:F (2.54) BS08 BGC N/A N/A A0AAX4NFB8 N/A
    867388 8rh5:F (2.54) BS09 GAL N/A N/A A0AAX4NFB8 N/A
    867389 8rh5:G (2.54) BS01 GAL N/A N/A A0AAX4NFB8 N/A
    867390 8rh5:G (2.54) BS02 GAL N/A N/A A0AAX4NFB8 N/A
    867391 8rh5:G (2.54) BS03 GAL N/A N/A A0AAX4NFB8 N/A
    867392 8rh5:G (2.54) BS04 GAL N/A N/A A0AAX4NFB8 N/A
    867393 8rh5:G (2.54) BS05 GAL N/A N/A A0AAX4NFB8 N/A
    867394 8rh5:G (2.54) BS06 BGC N/A N/A A0AAX4NFB8 N/A
    867395 8rh5:G (2.54) BS07 GAL N/A N/A A0AAX4NFB8 N/A
    867396 8rh5:G (2.54) BS08 BGC N/A N/A A0AAX4NFB8 N/A
    867397 8rh5:G (2.54) BS09 GAL N/A N/A A0AAX4NFB8 N/A
    867398 8rh5:H (2.54) BS01 GAL N/A N/A A0AAX4NFB8 N/A
    867399 8rh5:H (2.54) BS02 GAL N/A N/A A0AAX4NFB8 N/A
    867400 8rh5:H (2.54) BS03 GAL N/A N/A A0AAX4NFB8 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).