SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    867201 8qrl:N (3.34) BS01 rna N/A GO:0003735 ... Q9Y2R5 38969660
    867202 8qrl:O (3.34) BS01 rna N/A GO:0003735 ... Q9Y676 38969660
    867203 8qrl:O (3.34) BS02 ZN N/A GO:0003735 ... Q9Y676 38969660
    867204 8qrl:P (3.34) BS01 rna N/A GO:0003735 ... Q9Y3D5 38969660
    867205 8qrl:P (3.34) BS02 FES N/A GO:0003735 ... Q9Y3D5 38969660
    867206 8qrl:Q (3.34) BS01 rna N/A GO:0003723 ... P82921 38969660
    867207 8qrl:S (3.34) BS01 rna N/A GO:0003723 ... Q9Y3D9 38969660
    867208 8qrl:T (3.34) BS01 rna N/A GO:0003735 ... P82663 38969660
    867209 8qrl:T (3.34) BS02 FES N/A GO:0003735 ... P82663 38969660
    867210 8qrl:U (3.34) BS01 rna N/A GO:0003723 ... Q9BYN8 38969660
    867211 8qrl:V (3.34) BS01 rna N/A GO:0000049 ... Q92552 38969660
    867212 8qrl:X (3.34) BS01 rna N/A GO:0003723 ... P51398 38969660
    867213 8qrl:X (3.34) BS02 ATP N/A GO:0003723 ... P51398 38969660
    867214 8qrl:X (3.34) BS03 GDP N/A GO:0003723 ... P51398 38969660
    867215 8qrl:Z (3.34) BS01 rna N/A GO:0003735 ... Q9Y291 38969660
    867216 8qrm:0 (3.05) BS01 rna N/A GO:0003735 ... P82930 38969660
    867217 8qrm:2 (3.05) BS01 rna N/A GO:0001650 ... Q96BP2 38969660
    867218 8qrm:3 (3.05) BS01 rna N/A GO:0005515 ... Q9NWT8 38969660
    867219 8qrm:8 (3.05) BS01 rna N/A GO:0003743 ... Q9H2K0 38969660
    867220 8qrm:B (3.05) BS01 rna N/A GO:0003735 ... Q9Y399 38969660
    867221 8qrm:B (3.05) BS02 MG N/A GO:0003735 ... Q9Y399 38969660
    867222 8qrm:C (3.05) BS01 rna N/A GO:0003723 ... Q96EL2 38969660
    867223 8qrm:D (3.05) BS01 rna N/A GO:0003723 ... P82675 38969660
    867224 8qrm:E (3.05) BS01 rna N/A GO:0003735 ... P82932 38969660
    867225 8qrm:F (3.05) BS01 rna N/A GO:0003723 ... Q9Y2R9 38969660
    867226 8qrm:G (3.05) BS01 rna N/A GO:0003723 ... P82933 38969660
    867227 8qrm:H (3.05) BS01 rna N/A GO:0005739 ... P82664 38969660
    867228 8qrm:I (3.05) BS01 rna N/A GO:0003723 ... P82912 38969660
    867229 8qrm:J (3.05) BS01 rna N/A GO:0003723 ... O15235 38969660
    867230 8qrm:K (3.05) BS01 rna N/A GO:0003723 ... O60783 38969660
    867231 8qrm:L (3.05) BS01 rna N/A GO:0003723 ... P82914 38969660
    867232 8qrm:L (3.05) BS02 NAD N/A GO:0003723 ... P82914 38969660
    867233 8qrm:M (3.05) BS01 rna N/A GO:0003735 ... Q9Y3D3 38969660
    867234 8qrm:N (3.05) BS01 rna N/A GO:0003735 ... Q9Y2R5 38969660
    867235 8qrm:O (3.05) BS01 rna N/A GO:0003735 ... Q9Y676 38969660
    867236 8qrm:O (3.05) BS02 ZN N/A GO:0003735 ... Q9Y676 38969660
    867237 8qrm:P (3.05) BS01 rna N/A GO:0003735 ... Q9Y3D5 38969660
    867238 8qrm:P (3.05) BS02 FES N/A GO:0003735 ... Q9Y3D5 38969660
    867239 8qrm:Q (3.05) BS01 rna N/A GO:0003723 ... P82921 38969660
    867240 8qrm:S (3.05) BS01 rna N/A GO:0003723 ... Q9Y3D9 38969660
    867241 8qrm:T (3.05) BS01 rna N/A GO:0003735 ... P82663 38969660
    867242 8qrm:T (3.05) BS02 FES N/A GO:0003735 ... P82663 38969660
    867243 8qrm:U (3.05) BS01 rna N/A GO:0003723 ... Q9BYN8 38969660
    867244 8qrm:V (3.05) BS01 rna N/A GO:0000049 ... Q92552 38969660
    867245 8qrm:X (3.05) BS01 rna N/A GO:0003723 ... P51398 38969660
    867246 8qrm:X (3.05) BS02 ATP N/A GO:0003723 ... P51398 38969660
    867247 8qrm:X (3.05) BS03 GNP N/A GO:0003723 ... P51398 38969660
    867248 8qrm:Z (3.05) BS01 rna N/A GO:0003735 ... Q9Y291 38969660
    867249 8qrn:0 (2.98) BS01 rna N/A GO:0003735 ... P82930 38969660
    867250 8qrn:2 (2.98) BS01 rna N/A GO:0001650 ... Q96BP2 38969660
    867251 8qrn:3 (2.98) BS01 rna N/A GO:0005515 ... Q9NWT8 38969660
    867252 8qrn:7 (2.98) BS01 rna N/A GO:0001731 ... P46199 38969660
    867253 8qrn:7 (2.98) BS02 rna N/A GO:0001731 ... P46199 38969660
    867254 8qrn:7 (2.98) BS03 FME N/A GO:0001731 ... P46199 38969660
    867255 8qrn:7 (2.98) BS04 GTP N/A GO:0001731 ... P46199 38969660
    867256 8qrn:7 (2.98) BS05 MG N/A GO:0001731 ... P46199 38969660
    867257 8qrn:B (2.98) BS01 rna N/A GO:0003735 ... Q9Y399 38969660
    867258 8qrn:B (2.98) BS02 MG N/A GO:0003735 ... Q9Y399 38969660
    867259 8qrn:C (2.98) BS01 rna N/A GO:0003723 ... Q96EL2 38969660
    867260 8qrn:D (2.98) BS01 rna N/A GO:0003723 ... P82675 38969660
    867261 8qrn:E (2.98) BS01 rna N/A GO:0003735 ... P82932 38969660
    867262 8qrn:F (2.98) BS01 rna N/A GO:0003723 ... Q9Y2R9 38969660
    867263 8qrn:G (2.98) BS01 rna N/A GO:0003723 ... P82933 38969660
    867264 8qrn:H (2.98) BS01 rna N/A GO:0005739 ... P82664 38969660
    867265 8qrn:I (2.98) BS01 rna N/A GO:0003723 ... P82912 38969660
    867266 8qrn:J (2.98) BS01 rna N/A GO:0003723 ... O15235 38969660
    867267 8qrn:K (2.98) BS01 rna N/A GO:0003723 ... O60783 38969660
    867268 8qrn:L (2.98) BS01 rna N/A GO:0003723 ... P82914 38969660
    867269 8qrn:L (2.98) BS02 NAD N/A GO:0003723 ... P82914 38969660
    867270 8qrn:M (2.98) BS01 rna N/A GO:0003735 ... Q9Y3D3 38969660
    867271 8qrn:N (2.98) BS01 rna N/A GO:0003735 ... Q9Y2R5 38969660
    867272 8qrn:O (2.98) BS01 rna N/A GO:0003735 ... Q9Y676 38969660
    867273 8qrn:O (2.98) BS02 ZN N/A GO:0003735 ... Q9Y676 38969660
    867274 8qrn:P (2.98) BS01 rna N/A GO:0003735 ... Q9Y3D5 38969660
    867275 8qrn:P (2.98) BS02 FES N/A GO:0003735 ... Q9Y3D5 38969660
    867276 8qrn:Q (2.98) BS01 rna N/A GO:0003723 ... P82921 38969660
    867277 8qrn:S (2.98) BS01 rna N/A GO:0003723 ... Q9Y3D9 38969660
    867278 8qrn:T (2.98) BS01 rna N/A GO:0003735 ... P82663 38969660
    867279 8qrn:T (2.98) BS02 FES N/A GO:0003735 ... P82663 38969660
    867280 8qrn:U (2.98) BS01 rna N/A GO:0003723 ... Q9BYN8 38969660
    867281 8qrn:V (2.98) BS01 rna N/A GO:0000049 ... Q92552 38969660
    867282 8qrn:X (2.98) BS01 rna N/A GO:0003723 ... P51398 38969660
    867283 8qrn:X (2.98) BS02 ATP N/A GO:0003723 ... P51398 38969660
    867284 8qrn:X (2.98) BS03 GNP N/A GO:0003723 ... P51398 38969660
    867285 8qrn:Z (2.98) BS01 rna N/A GO:0003735 ... Q9Y291 38969660
    867286 8qro:A (2.6) BS01 GLN N/A GO:0005515 ... Q15758 39095408
    867287 8qro:B (2.6) BS01 GLN N/A GO:0005515 ... Q15758 39095408
    867288 8qro:C (2.6) BS01 GLN N/A GO:0005515 ... Q15758 39095408
    867289 8qrp:B (2.7) BS01 GLN N/A GO:0005515 ... Q15758 39095408
    867290 8qrq:B (2.74) BS01 GLN N/A GO:0005515 ... Q15758 39095408
    867291 8qrr:B (2.78) BS01 GLN N/A GO:0005515 ... Q15758 39095408
    867292 8qrs:B (2.86) BS01 GLN N/A GO:0005515 ... Q15758 39095408
    867293 8qrt:AAA (2.0) BS01 WP2 N/A GO:0006633 ... N/A 38334233
    867294 8qrt:BBB (2.0) BS01 WP2 N/A GO:0006633 ... N/A 38334233
    867295 8qrt:CCC (2.0) BS01 WP2 N/A GO:0006633 ... N/A 38334233
    867296 8qrt:DDD (2.0) BS01 WP2 N/A GO:0006633 ... N/A 38334233
    867297 8qru:B (2.9) BS01 GLN N/A GO:0005515 ... Q15758 39095408
    867298 8qs0:AAA (2.3) BS01 WOX N/A GO:0006633 ... N/A 38334233
    867299 8qs0:BBB (2.3) BS01 WOX N/A GO:0006633 ... N/A 38334233
    867300 8qs0:CCC (2.3) BS01 WOX N/A GO:0006633 ... N/A 38334233
    867301 8qs0:DDD (2.3) BS01 WOX N/A GO:0006633 ... N/A 38334233
    867302 8qs2:A (2.0) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867303 8qs2:A (2.0) BS02 MG N/A GO:0001836 ... P31947 41617210
    867304 8qs2:A (2.0) BS03 WPW N/A GO:0001836 ... P31947 41617210
    867305 8qs3:A (1.6) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867306 8qs3:A (1.6) BS02 MG N/A GO:0001836 ... P31947 41617210
    867307 8qs3:A (1.6) BS03 WQI N/A GO:0001836 ... P31947 41617210
    867308 8qs3:M (1.6) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867309 8qs3:M (1.6) BS02 MG N/A GO:0001836 ... P31947 41617210
    867310 8qs3:M (1.6) BS03 WQI N/A GO:0001836 ... P31947 41617210
    867311 8qs4:A (2.0) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867312 8qs4:A (2.0) BS02 MG N/A GO:0001836 ... P31947 41617210
    867313 8qs4:A (2.0) BS03 WPN N/A GO:0001836 ... P31947 41617210
    867314 8qs5:A (2.0) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867315 8qs5:A (2.0) BS02 MG N/A GO:0001836 ... P31947 41617210
    867316 8qs5:A (2.0) BS03 WQ5 N/A GO:0001836 ... P31947 41617210
    867317 8qs6:A (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867318 8qs6:A (1.8) BS02 MG N/A GO:0001836 ... P31947 41617210
    867319 8qs6:A (1.8) BS03 WQ0 N/A GO:0001836 ... P31947 41617210
    867320 8qs7:A (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867321 8qs7:A (1.8) BS02 WQX N/A GO:0001836 ... P31947 41617210
    867322 8qs8:A (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867323 8qs8:A (1.8) BS02 MG N/A GO:0001836 ... P31947 41617210
    867324 8qs8:A (1.8) BS03 WQN N/A GO:0001836 ... P31947 41617210
    867325 8qs9:A (2.0) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867326 8qs9:A (2.0) BS02 MG N/A GO:0001836 ... P31947 41617210
    867327 8qs9:A (2.0) BS03 WQE N/A GO:0001836 ... P31947 41617210
    867328 8qsa:A (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867329 8qsa:A (1.8) BS02 WQ9 N/A GO:0001836 ... P31947 41617210
    867330 8qsb:A (1.9) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867331 8qsb:A (1.9) BS02 WQ9 N/A GO:0001836 ... P31947 41617210
    867332 8qsb:A (1.9) BS03 MG N/A GO:0001836 ... P31947 41617210
    867333 8qsb:J (1.9) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867334 8qsb:J (1.9) BS02 WQ9 N/A GO:0001836 ... P31947 41617210
    867335 8qsc:A (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867336 8qsc:A (1.8) BS02 WPN N/A GO:0001836 ... P31947 41617210
    867337 8qsc:J (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867338 8qsc:J (1.8) BS02 WPN N/A GO:0001836 ... P31947 41617210
    867339 8qsd:A (2.0) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867340 8qsd:A (2.0) BS02 WQT N/A GO:0001836 ... P31947 41617210
    867341 8qsd:J (2.0) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867342 8qsd:J (2.0) BS02 WQT N/A GO:0001836 ... P31947 41617210
    867343 8qse:A (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867344 8qse:A (1.8) BS02 WQI N/A GO:0001836 ... P31947 41617210
    867345 8qse:J (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867346 8qse:J (1.8) BS02 WQI N/A GO:0001836 ... P31947 41617210
    867347 8qsf:A (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867348 8qsf:A (1.8) BS02 WPN N/A GO:0001836 ... P31947 41617210
    867349 8qsf:J (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867350 8qsf:J (1.8) BS02 WPN N/A GO:0001836 ... P31947 41617210
    867351 8qsg:A (2.0) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867352 8qsg:A (2.0) BS02 WQ9 N/A GO:0001836 ... P31947 41617210
    867353 8qsg:J (2.0) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867354 8qsg:J (2.0) BS02 WQ9 N/A GO:0001836 ... P31947 41617210
    867355 8qsh:A (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867356 8qsh:A (1.8) BS02 WQI N/A GO:0001836 ... P31947 41617210
    867357 8qsh:J (1.8) BS01 peptide N/A GO:0001836 ... P31947 41617210
    867358 8qsh:J (1.8) BS02 WQI N/A GO:0001836 ... P31947 41617210
    867359 8qsi:PM (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867360 8qsi:PN (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867361 8qsi:PO (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867362 8qsi:PP (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867363 8qsi:PQ (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867364 8qsi:PR (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867365 8qsi:PS (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867366 8qsi:PT (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867367 8qsi:PU (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867368 8qsi:PV (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867369 8qsi:PW (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867370 8qsi:PX (2.75) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867371 8qsj:0 (3.0) BS01 rna ? GO:0003723 ... Q9BYC8 38042949
    867372 8qsj:0 (3.0) BS02 ZN ? GO:0003723 ... Q9BYC8 38042949
    867373 8qsj:1 (3.0) BS01 rna ? GO:0003735 ... O75394 38042949
    867374 8qsj:2 (3.0) BS01 rna ? GO:0003735 ... Q9BQ48 38042949
    867375 8qsj:3 (3.0) BS01 rna ? GO:0003735 ... Q9NZE8 38042949
    867376 8qsj:4 (3.0) BS01 rna ? GO:0003735 ... Q9P0J6 38042949
    867377 8qsj:4 (3.0) BS02 ZN ? GO:0003735 ... Q9P0J6 38042949
    867378 8qsj:5 (3.0) BS01 rna ? GO:0003723 ... Q9BZE1 38042949
    867379 8qsj:6 (3.0) BS01 rna ? GO:0005515 ... Q96DV4 38042949
    867380 8qsj:6 (3.0) BS02 rna ? GO:0005515 ... Q96DV4 38042949
    867381 8qsj:8 (3.0) BS01 rna ? GO:0003723 ... Q9NQ50 38042949
    867382 8qsj:9 (3.0) BS01 rna ? GO:0003723 ... Q8IXM3 38042949
    867383 8qsj:D (3.0) BS01 rna ? GO:0003723 ... Q5T653 38042949
    867384 8qsj:E (3.0) BS01 rna ? GO:0003723 ... P09001 38042949
    867385 8qsj:F (3.0) BS01 rna ? GO:0003723 ... Q9BYD3 38042949
    867386 8qsj:H (3.0) BS01 rna ? GO:0003723 ... Q9BYD2 38042949
    867387 8qsj:I (3.0) BS01 rna ? GO:0003723 ... Q7Z7H8 38042949
    867388 8qsj:I (3.0) BS02 peptide ? GO:0003723 ... Q7Z7H8 38042949
    867389 8qsj:J (3.0) BS01 rna ? GO:0003723 ... Q9Y3B7 38042949
    867390 8qsj:K (3.0) BS01 rna ? GO:0003723 ... Q9BYD1 38042949
    867391 8qsj:L (3.0) BS01 rna ? GO:0003723 ... Q6P1L8 38042949
    867392 8qsj:M (3.0) BS01 rna ? GO:0003723 ... Q9P015 38042949
    867393 8qsj:M (3.0) BS02 MG ? GO:0003723 ... Q9P015 38042949
    867394 8qsj:N (3.0) BS01 rna ? GO:0003735 ... Q9NX20 38042949
    867395 8qsj:N (3.0) BS02 peptide ? GO:0003735 ... Q9NX20 38042949
    867396 8qsj:O (3.0) BS01 rna ? GO:0003735 ... Q9NRX2 38042949
    867397 8qsj:P (3.0) BS01 rna ? GO:0003735 ... Q9H0U6 38042949
    867398 8qsj:P (3.0) BS02 rna ? GO:0003735 ... Q9H0U6 38042949
    867399 8qsj:Q (3.0) BS01 rna ? GO:0003735 ... P49406 38042949
    867400 8qsj:R (3.0) BS01 rna ? GO:0003723 ... Q9BYC9 38042949

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).