SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    867401 8qsj:S (3.0) BS01 rna ? GO:0003723 ... Q7Z2W9 38042949
    867402 8qsj:T (3.0) BS01 rna ? GO:0003723 ... Q9NWU5 38042949
    867403 8qsj:U (3.0) BS01 rna ? GO:0003723 ... Q16540 38042949
    867404 8qsj:V (3.0) BS01 rna ? GO:0003723 ... Q96A35 38042949
    867405 8qsj:W (3.0) BS01 rna ? GO:0003723 ... Q9P0M9 38042949
    867406 8qsj:X (3.0) BS01 rna ? GO:0003723 ... Q13084 38042949
    867407 8qsj:Y (3.0) BS01 rna ? GO:0003735 ... Q9HD33 38042949
    867408 8qsj:Z (3.0) BS01 rna ? GO:0003735 ... Q8TCC3 38042949
    867409 8qsj:a (3.0) BS01 rna ? GO:0003723 ... Q9Y6G3 38042949
    867410 8qsj:b (3.0) BS01 rna ? GO:0003723 ... Q8N983 38042949
    867411 8qsj:c (3.0) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 38042949
    867412 8qsj:d (3.0) BS01 rna ? GO:0003723 ... Q9BRJ2 38042949
    867413 8qsj:e (3.0) BS01 rna ? GO:0003735 ... Q9H2W6 38042949
    867414 8qsj:f (3.0) BS01 rna ? GO:0005515 ... Q96GC5 38042949
    867415 8qsj:f (3.0) BS02 rna ? GO:0005515 ... Q96GC5 38042949
    867416 8qsj:g (3.0) BS01 rna ? GO:0003735 ... Q13405 38042949
    867417 8qsj:i (3.0) BS01 rna ? GO:0003735 ... Q4U2R6 38042949
    867418 8qsj:j (3.0) BS01 rna ? GO:0003735 ... Q86TS9 38042949
    867419 8qsj:o (3.0) BS01 rna ? GO:0003735 ... Q9BQC6 38042949
    867420 8qsj:q (3.0) BS01 rna ? GO:0003735 ... Q8TAE8 38042949
    867421 8qsj:r (3.0) BS01 rna ? GO:0003735 ... Q9NVS2 38042949
    867422 8qsj:r (3.0) BS02 FES ? GO:0003735 ... Q9NVS2 38042949
    867423 8qsj:s (3.0) BS01 rna ? GO:0003723 ... Q9NP92 38042949
    867424 8qsj:u (3.0) BS01 rna ? GO:0005515 ... Q96EH3 38042949
    867425 8qsj:v (3.0) BS01 PM8 ? GO:0000266 ... L0R8F8 38042949
    867426 8qsj:x (3.0) BS01 rna 2.1.1.- GO:0000957 ... Q96CB9 38042949
    867427 8qsj:x (3.0) BS02 SAM 2.1.1.- GO:0000957 ... Q96CB9 38042949
    867428 8qsj:y (3.0) BS01 rna ? GO:0003676 ... Q7Z6M4 38042949
    867429 8qsj:z (3.0) BS01 rna ? GO:0003924 ... Q9BT17 38042949
    867430 8qsj:z (3.0) BS02 GNP ? GO:0003924 ... Q9BT17 38042949
    867431 8qsj:z (3.0) BS03 MG ? GO:0003924 ... Q9BT17 38042949
    867432 8qsk:A (3.3) BS01 Y01 ? GO:0005290 ... Q8N697 N/A
    867433 8qsk:A (3.3) BS02 Y01 ? GO:0005290 ... Q8N697 N/A
    867434 8qsk:A (3.3) BS03 Y01 ? GO:0005290 ... Q8N697 N/A
    867435 8qsk:A (3.3) BS04 Y01 ? GO:0005290 ... Q8N697 N/A
    867436 8qsk:A (3.3) BS05 Y01 ? GO:0005290 ... Q8N697 N/A
    867437 8qsk:A (3.3) BS06 Y01 ? GO:0005290 ... Q8N697 N/A
    867438 8qsk:A (3.3) BS07 Y01 ? GO:0005290 ... Q8N697 N/A
    867439 8qsk:A (3.3) BS08 Y01 ? GO:0005290 ... Q8N697 N/A
    867440 8qsk:C (3.3) BS01 Y01 ? GO:0005290 ... Q8N697 N/A
    867441 8qsk:C (3.3) BS02 Y01 ? GO:0005290 ... Q8N697 N/A
    867442 8qsk:C (3.3) BS03 Y01 ? GO:0005290 ... Q8N697 N/A
    867443 8qsk:C (3.3) BS04 Y01 ? GO:0005290 ... Q8N697 N/A
    867444 8qsk:C (3.3) BS05 Y01 ? GO:0005290 ... Q8N697 N/A
    867445 8qsk:C (3.3) BS06 Y01 ? GO:0005290 ... Q8N697 N/A
    867446 8qsk:C (3.3) BS07 Y01 ? GO:0005290 ... Q8N697 N/A
    867447 8qsk:C (3.3) BS08 Y01 ? GO:0005290 ... Q8N697 N/A
    867448 8qsl:A (2.81) BS01 Y01 ? GO:0005290 ... Q8N697 N/A
    867449 8qsl:A (2.81) BS02 Y01 ? GO:0005290 ... Q8N697 N/A
    867450 8qsl:A (2.81) BS03 Y01 ? GO:0005290 ... Q8N697 N/A
    867451 8qsl:A (2.81) BS04 Y01 ? GO:0005290 ... Q8N697 N/A
    867452 8qsl:A (2.81) BS05 Y01 ? GO:0005290 ... Q8N697 N/A
    867453 8qsl:A (2.81) BS06 Y01 ? GO:0005290 ... Q8N697 N/A
    867454 8qsl:A (2.81) BS07 Y01 ? GO:0005290 ... Q8N697 N/A
    867455 8qsl:C (2.81) BS01 Y01 ? GO:0005290 ... Q8N697 N/A
    867456 8qsl:C (2.81) BS02 Y01 ? GO:0005290 ... Q8N697 N/A
    867457 8qsl:C (2.81) BS03 Y01 ? GO:0005290 ... Q8N697 N/A
    867458 8qsl:C (2.81) BS04 Y01 ? GO:0005290 ... Q8N697 N/A
    867459 8qsl:C (2.81) BS05 Y01 ? GO:0005290 ... Q8N697 N/A
    867460 8qsl:C (2.81) BS06 Y01 ? GO:0005290 ... Q8N697 N/A
    867461 8qsl:C (2.81) BS07 Y01 ? GO:0005290 ... Q8N697 N/A
    867462 8qso:A (2.106) BS01 GLC ? GO:0005515 ... P0AEX9
    Q07820
    38306405
    867463 8qso:A (2.106) BS02 GLC ? GO:0005515 ... P0AEX9
    Q07820
    38306405
    867464 8qso:A (2.106) BS03 WXW ? GO:0005515 ... P0AEX9
    Q07820
    38306405
    867465 8qsp:A (3.69) BS01 CA N/A N/A P98088 40016425
    867466 8qsp:B (3.69) BS01 CA N/A N/A P98088 40016425
    867467 8qsp:C (3.69) BS01 CA N/A N/A P98088 40016425
    867468 8qsp:D (3.69) BS01 CA N/A N/A P98088 40016425
    867469 8qsr:A (2.56) BS01 BGC N/A GO:0005515 ... P69786 39266522
    867470 8qsr:B (2.56) BS01 BGC N/A GO:0005515 ... P69786 39266522
    867471 8qst:A (2.89) BS01 BGC N/A GO:0005515 ... P69786 39266522
    867472 8qst:B (2.89) BS01 BGC N/A GO:0005515 ... P69786 39266522
    867473 8qsu:A (2.38) BS01 SAH N/A N/A Q5T280 39962046
    867474 8qsv:A (2.62) BS01 SAM N/A N/A Q5T280 39962046
    867475 8qsy:JA (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867476 8qsy:JA (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867477 8qsy:JA (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867478 8qsy:JB (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867479 8qsy:JB (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867480 8qsy:JB (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867481 8qsy:JC (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867482 8qsy:JC (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867483 8qsy:JC (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867484 8qsy:JD (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867485 8qsy:JD (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867486 8qsy:JE (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867487 8qsy:JE (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867488 8qsy:JE (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867489 8qsy:JF (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867490 8qsy:JF (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867491 8qsy:JF (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867492 8qsy:KA (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867493 8qsy:KA (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867494 8qsy:KA (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867495 8qsy:KB (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867496 8qsy:KB (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867497 8qsy:KC (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867498 8qsy:KC (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867499 8qsy:KC (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867500 8qsy:KD (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867501 8qsy:KD (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867502 8qsy:KD (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867503 8qsy:KD (2.68) BS04 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867504 8qsy:KE (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867505 8qsy:KE (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867506 8qsy:KE (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867507 8qsy:KF (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867508 8qsy:KF (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867509 8qsy:KF (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867510 8qsy:KI (2.68) BS01 MG N/A GO:0046872 ... A0A410N6Q7 41042861
    867511 8qsy:LA (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867512 8qsy:LA (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867513 8qsy:LA (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867514 8qsy:LB (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867515 8qsy:LB (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867516 8qsy:LC (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867517 8qsy:LC (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867518 8qsy:LD (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867519 8qsy:LD (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867520 8qsy:LD (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867521 8qsy:LE (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867522 8qsy:LE (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867523 8qsy:LF (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867524 8qsy:LF (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867525 8qsy:LF (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867526 8qsy:MA (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867527 8qsy:MA (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867528 8qsy:MA (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867529 8qsy:MB (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867530 8qsy:MB (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867531 8qsy:MC (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867532 8qsy:MC (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867533 8qsy:MD (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867534 8qsy:MD (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867535 8qsy:MD (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867536 8qsy:ME (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867537 8qsy:ME (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867538 8qsy:MF (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867539 8qsy:MF (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867540 8qsy:MF (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867541 8qsy:NA (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867542 8qsy:NA (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867543 8qsy:NA (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867544 8qsy:NB (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867545 8qsy:NB (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867546 8qsy:NB (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867547 8qsy:NC (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867548 8qsy:NC (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867549 8qsy:NC (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867550 8qsy:ND (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867551 8qsy:ND (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867552 8qsy:ND (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867553 8qsy:NE (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867554 8qsy:NE (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867555 8qsy:NF (2.68) BS01 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867556 8qsy:NF (2.68) BS02 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867557 8qsy:NF (2.68) BS03 MG N/A GO:0046872 ... A0A410N6T9 41042861
    867558 8qsy:PM (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867559 8qsy:PN (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867560 8qsy:PO (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867561 8qsy:PP (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867562 8qsy:PQ (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867563 8qsy:PR (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867564 8qsy:PS (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867565 8qsy:PT (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867566 8qsy:PU (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867567 8qsy:PV (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867568 8qsy:PW (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867569 8qsy:PX (2.68) BS01 MG N/A GO:0046872 ... A0A410N6S3 41042861
    867570 8qsz:A (2.67) BS01 dna N/A GO:0000785 ... P36594 39746995
    867571 8qsz:A (2.67) BS02 rna N/A GO:0000785 ... P36594 39746995
    867572 8qsz:A (2.67) BS03 dna N/A GO:0000785 ... P36594 39746995
    867573 8qsz:B (2.67) BS01 rna N/A GO:0003676 ... Q02061 39746995
    867574 8qsz:B (2.67) BS02 dna N/A GO:0003676 ... Q02061 39746995
    867575 8qsz:B (2.67) BS03 peptide N/A GO:0003676 ... Q02061 39746995
    867576 8qsz:C (2.67) BS01 ZN N/A GO:0000428 ... P37382 39746995
    867577 8qsz:L (2.67) BS01 peptide N/A GO:0003677 ... P48011 39746995
    867578 8qt0:A (1.85) BS01 peptide N/A GO:0017136 ... Q8IXJ6 N/A
    867579 8qt0:A (1.85) BS02 ZN N/A GO:0017136 ... Q8IXJ6 N/A
    867580 8qt0:A (1.85) BS03 WWE N/A GO:0017136 ... Q8IXJ6 N/A
    867581 8qt1:A (1.55) BS01 peptide N/A GO:0017136 ... Q8IXJ6 N/A
    867582 8qt1:A (1.55) BS02 ZN N/A GO:0017136 ... Q8IXJ6 N/A
    867583 8qt1:A (1.55) BS03 WU3 N/A GO:0017136 ... Q8IXJ6 N/A
    867584 8qt2:A (1.65) BS01 peptide N/A GO:0017136 ... Q8IXJ6 N/A
    867585 8qt2:A (1.65) BS02 ZN N/A GO:0017136 ... Q8IXJ6 N/A
    867586 8qt2:A (1.65) BS03 BU3 N/A GO:0017136 ... Q8IXJ6 N/A
    867587 8qt2:A (1.65) BS04 WU8 N/A GO:0017136 ... Q8IXJ6 N/A
    867588 8qt3:A (1.55) BS01 peptide N/A GO:0017136 ... Q8IXJ6 N/A
    867589 8qt3:A (1.55) BS02 ZN N/A GO:0017136 ... Q8IXJ6 N/A
    867590 8qt3:A (1.55) BS03 NAD N/A GO:0017136 ... Q8IXJ6 N/A
    867591 8qt3:A (1.55) BS04 WU3 N/A GO:0017136 ... Q8IXJ6 N/A
    867592 8qt4:A (1.55) BS01 peptide N/A GO:0017136 ... Q8IXJ6 N/A
    867593 8qt4:A (1.55) BS02 ZN N/A GO:0017136 ... Q8IXJ6 N/A
    867594 8qt4:A (1.55) BS03 NAD N/A GO:0017136 ... Q8IXJ6 N/A
    867595 8qt4:A (1.55) BS04 WU8 N/A GO:0017136 ... Q8IXJ6 N/A
    867596 8qt6:A (2.29) BS01 FAD N/A GO:0016491 ... Q8CZ28 39039317
    867597 8qt6:A (2.29) BS02 HEM N/A GO:0016491 ... Q8CZ28 39039317
    867598 8qt6:A (2.29) BS03 HEM N/A GO:0016491 ... Q8CZ28 39039317
    867599 8qt7:A (2.2) BS01 NDP N/A GO:0016491 ... Q8CZ28 39039317
    867600 8qt7:A (2.2) BS02 FAD N/A GO:0016491 ... Q8CZ28 39039317

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).