SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    86601 2gsp:A (1.8) BS01 SGP 4.6.1.24 GO:0001411 ... P00651 9546218
    86602 2gsp:A (1.8) BS02 3GP 4.6.1.24 GO:0001411 ... P00651 9546218
    86603 2gsq:A (2.2) BS01 GBI 2.5.1.18 GO:0004364 ... P46088 8710848
    86604 2gsq:A (2.2) BS02 GBI 2.5.1.18 GO:0004364 ... P46088 8710848
    86605 2gsr:A (2.11) BS01 GTS 2.5.1.18 GO:0004364 ... P80031 7932743 MOAD: Ki=4uM
    86606 2gsr:B (2.11) BS01 GTS 2.5.1.18 GO:0004364 ... P80031 7932743 MOAD: Ki=4uM
    86607 2gss:A (1.9) BS01 EAA 2.5.1.18 GO:0000122 ... P09211 9012673 MOAD: Ki=11.5uM
    BindingDB: IC50=2.6e+4nM
    86608 2gss:B (1.9) BS01 EAA 2.5.1.18 GO:0000122 ... P09211 9012673 MOAD: Ki=11.5uM
    BindingDB: IC50=2.6e+4nM
    86609 2gst:A (1.8) BS01 GPS 2.5.1.18 GO:0004364 ... P04905 8110735 MOAD: Ki=0.85uM
    86610 2gst:B (1.8) BS01 GPS 2.5.1.18 GO:0004364 ... P04905 8110735 MOAD: Ki=0.85uM
    86611 2gsu:A (2.0) BS01 ZN N/A N/A N/A 16893180
    86612 2gsu:A (2.0) BS02 ZN N/A N/A N/A 16893180
    86613 2gsu:A (2.0) BS03 AMP N/A N/A N/A 16893180 MOAD: Ki=268uM
    86614 2gsu:B (2.0) BS01 ZN N/A N/A N/A 16893180
    86615 2gsu:B (2.0) BS02 ZN N/A N/A N/A 16893180
    86616 2gsu:B (2.0) BS03 AMP N/A N/A N/A 16893180 MOAD: Ki=268uM
    86617 2gsw:A (2.92) BS01 FMN 1.7.-.- GO:0005829 ... O07529 N/A
    86618 2gsw:B (2.92) BS01 FMN 1.7.-.- GO:0005829 ... O07529 N/A
    86619 2gsw:C (2.92) BS01 FMN 1.7.-.- GO:0005829 ... O07529 N/A
    86620 2gsw:D (2.92) BS01 FMN 1.7.-.- GO:0005829 ... O07529 N/A
    86621 2gsy:A (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86622 2gsy:B (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86623 2gsy:C (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86624 2gsy:D (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86625 2gsy:E (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86626 2gsy:F (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86627 2gsy:G (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86628 2gsy:H (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86629 2gsy:I (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86630 2gsy:J (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86631 2gsy:K (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86632 2gsy:L (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86633 2gsy:M (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86634 2gsy:N (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86635 2gsy:O (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86636 2gsy:P (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86637 2gsy:Q (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86638 2gsy:R (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86639 2gsy:S (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86640 2gsy:T (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    86641 2gsz:F (4.2) BS01 ADP ? GO:0005524 ... O66950 17355871
    86642 2gt4:A (2.3) BS01 MG 3.6.1.- GO:0000287 ... P32056 16981689
    86643 2gt4:A (2.3) BS02 GDD 3.6.1.- GO:0000287 ... P32056 16981689
    86644 2gt4:B (2.3) BS01 BMA 3.6.1.- GO:0000287 ... P32056 16981689
    86645 2gt4:B (2.3) BS02 MG 3.6.1.- GO:0000287 ... P32056 16981689
    86646 2gt4:B (2.3) BS03 GDD 3.6.1.- GO:0000287 ... P32056 16981689
    86647 2gt4:C (2.3) BS01 BMA 3.6.1.- GO:0000287 ... P32056 16981689
    86648 2gt4:C (2.3) BS02 MG 3.6.1.- GO:0000287 ... P32056 16981689
    86649 2gt4:C (2.3) BS03 GDD 3.6.1.- GO:0000287 ... P32056 16981689
    86650 2gt6:A (-1.00) BS01 CU1 ? N/A O75880 16735468
    86651 2gt9:A (1.75) BS01 peptide ? N/A P04439 17719062
    86652 2gt9:D (1.75) BS01 peptide ? N/A P04439 17719062
    86653 2gtb:A (2.0) BS01 AZP 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6U8 17196984
    86654 2gte:A (1.4) BS01 VA ? GO:0005549 ... O02372 18585358
    86655 2gte:B (1.4) BS01 VA ? GO:0005549 ... O02372 18585358
    86656 2gtf:X (1.4) BS01 HEM ? GO:0005576 ... Q26241 N/A
    86657 2gtf:X (1.4) BS02 P1R ? GO:0005576 ... Q26241 N/A
    86658 2gtk:A (2.1) BS01 peptide ? GO:0003677 ... P37231 16737814
    86659 2gtk:A (2.1) BS02 208 ? GO:0003677 ... P37231 16737814 MOAD: ic50=0.251uM
    BindingDB: EC50=760nM, IC50=251nM
    86660 2gtl:A (3.5) BS01 HEM ? GO:0005506 ... P13579 16843898
    86661 2gtl:A (3.5) BS02 HEM ? GO:0005506 ... P13579 16843898
    86662 2gtl:B (3.5) BS01 HEM ? GO:0005506 ... P02218 16843898
    86663 2gtl:C (3.5) BS01 HEM ? GO:0005506 ... P11069 16843898
    86664 2gtl:D (3.5) BS01 HEM ? GO:0005344 ... O61233 16843898
    86665 2gtl:E (3.5) BS01 HEM ? GO:0005506 ... P13579 16843898
    86666 2gtl:E (3.5) BS02 HEM ? GO:0005506 ... P13579 16843898
    86667 2gtl:F (3.5) BS01 HEM ? GO:0005506 ... P02218 16843898
    86668 2gtl:G (3.5) BS01 HEM ? GO:0005506 ... P11069 16843898
    86669 2gtl:G (3.5) BS02 HEM ? GO:0005506 ... P11069 16843898
    86670 2gtl:G (3.5) BS03 CA ? GO:0005506 ... P11069 16843898
    86671 2gtl:H (3.5) BS01 HEM ? GO:0005344 ... O61233 16843898
    86672 2gtl:I (3.5) BS01 HEM ? GO:0005506 ... P13579 16843898
    86673 2gtl:I (3.5) BS02 HEM ? GO:0005506 ... P13579 16843898
    86674 2gtl:J (3.5) BS01 HEM ? GO:0005506 ... P02218 16843898
    86675 2gtl:K (3.5) BS01 HEM ? GO:0005506 ... P11069 16843898
    86676 2gtl:L (3.5) BS01 HEM ? GO:0005344 ... O61233 16843898
    86677 2gtl:M (3.5) BS01 CA ? N/A Q9GV76 16843898
    86678 2gtl:N (3.5) BS01 CA ? N/A Q2I743 16843898
    86679 2gtl:O (3.5) BS01 CA ? N/A Q2I742 16843898
    86680 2gtm:A (1.9) BS01 LID 2.7.11.24 GO:0000077 ... P47811 16750367 MOAD: ic50=542nM
    86681 2gtn:A (1.8) BS01 LIE 2.7.11.24 GO:0000077 ... P47811 16750367 MOAD: ic50=4nM
    86682 2gtp:A (2.55) BS01 ALF ? GO:0000132 ... P63096 18434541
    86683 2gtp:A (2.55) BS02 MG ? GO:0000132 ... P63096 18434541
    86684 2gtp:A (2.55) BS03 GDP ? GO:0000132 ... P63096 18434541
    86685 2gtp:B (2.55) BS01 ALF ? GO:0000132 ... P63096 18434541
    86686 2gtp:B (2.55) BS02 MG ? GO:0000132 ... P63096 18434541
    86687 2gtp:B (2.55) BS03 GDP ? GO:0000132 ... P63096 18434541
    86688 2gtq:A (2.05) BS01 ZN 3.4.11.2 GO:0004177 ... Q9JYV4 17876832
    86689 2gtt:A (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86690 2gtt:B (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86691 2gtt:C (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86692 2gtt:D (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86693 2gtt:E (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86694 2gtt:F (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86695 2gtt:G (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86696 2gtt:H (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86697 2gtt:I (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86698 2gtt:J (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86699 2gtt:K (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86700 2gtt:L (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86701 2gtt:M (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86702 2gtt:N (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86703 2gtt:O (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86704 2gtt:P (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86705 2gtt:Q (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86706 2gtt:R (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86707 2gtt:S (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86708 2gtt:T (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86709 2gtt:U (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86710 2gtt:V (3.49) BS01 rna ? GO:0003723 ... P0DOF3 16778023
    86711 2gtv:X (-1.00) BS01 TSA 5.4.99.5 GO:0004106 ... Q57696 17994104
    86712 2gtw:A (1.548) BS01 peptide ? N/A P04439 17719062
    86713 2gtw:D (1.548) BS01 peptide ? N/A P04439 17719062
    86714 2gtx:A (2.0) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86715 2gtx:A (2.0) BS02 NLP 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86716 2gtx:B (2.0) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86717 2gtx:B (2.0) BS02 NLP 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86718 2gtz:A (1.7) BS01 peptide ? N/A P04439 17719062
    86719 2gtz:D (1.7) BS01 peptide ? N/A P04439 17719062
    86720 2gu1:A (1.9) BS01 ZN 3.4.-.- GO:0042834 ... Q9KUL5 18498110
    86721 2gu2:A (1.805) BS01 ZN 3.5.1.15 GO:0005634 ... Q9R1T5 17194761
    86722 2gu2:B (1.805) BS01 ZN 3.5.1.15 GO:0005634 ... Q9R1T5 17194761
    86723 2gu4:A (1.8) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86724 2gu4:A (1.8) BS02 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86725 2gu4:A (1.8) BS03 NLP 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86726 2gu4:B (1.8) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86727 2gu4:B (1.8) BS02 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86728 2gu4:B (1.8) BS03 NLP 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86729 2gu5:A (1.6) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86730 2gu5:A (1.6) BS02 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86731 2gu5:A (1.6) BS03 NLP 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86732 2gu5:B (1.6) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86733 2gu5:B (1.6) BS02 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86734 2gu5:B (1.6) BS03 NLP 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86735 2gu6:A (1.7) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86736 2gu6:A (1.7) BS02 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86737 2gu6:A (1.7) BS03 NLP 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86738 2gu6:B (1.7) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86739 2gu6:B (1.7) BS02 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86740 2gu6:B (1.7) BS03 NLP 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86741 2gu7:A (2.0) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86742 2gu7:A (2.0) BS02 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86743 2gu7:B (2.0) BS01 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86744 2gu7:B (2.0) BS02 MN 3.4.11.18 GO:0004239 ... P0AE18 16769889
    86745 2gu8:A (2.2) BS01 peptide 2.7.11.11 GO:0000287 ... P17612 16765046
    86746 2gu8:A (2.2) BS02 796 2.7.11.11 GO:0000287 ... P17612 16765046 MOAD: ic50=0.1nM
    BindingDB: IC50=0.100000nM
    86747 2guc:A (1.79) BS01 MAN ? GO:0005515 ... P84801 16843894
    86748 2guc:A (1.79) BS02 MAN ? GO:0005515 ... P84801 16843894
    86749 2guc:A (1.79) BS03 MAN ? GO:0005515 ... P84801 16843894
    86750 2guc:B (1.79) BS01 MAN ? GO:0005515 ... P84801 16843894
    86751 2guc:B (1.79) BS02 MAN ? GO:0005515 ... P84801 16843894
    86752 2guc:B (1.79) BS03 MAN ? GO:0005515 ... P84801 16843894
    86753 2gud:A (0.94) BS01 MAN ? GO:0005515 ... P84801 16843894
    86754 2gud:A (0.94) BS02 BMA ? GO:0005515 ... P84801 16843894
    86755 2gud:A (0.94) BS03 MAN ? GO:0005515 ... P84801 16843894
    86756 2gud:A (0.94) BS04 MAN ? GO:0005515 ... P84801 16843894
    86757 2gud:A (0.94) BS05 BMA ? GO:0005515 ... P84801 16843894
    86758 2gud:B (0.94) BS01 BMA ? GO:0005515 ... P84801 16843894
    86759 2gud:B (0.94) BS02 MAN ? GO:0005515 ... P84801 16843894
    86760 2gud:B (0.94) BS03 MAN ? GO:0005515 ... P84801 16843894
    86761 2gud:B (0.94) BS04 MAN ? GO:0005515 ... P84801 16843894
    86762 2guf:A (1.95) BS01 MPG ? GO:0005509 ... P06129 17028020
    86763 2guf:A (1.95) BS02 MPG ? GO:0005509 ... P06129 17028020
    86764 2guf:A (1.95) BS03 MPG ? GO:0005509 ... P06129 17028020
    86765 2guf:A (1.95) BS04 MPG ? GO:0005509 ... P06129 17028020
    86766 2guf:A (1.95) BS05 MPG ? GO:0005509 ... P06129 17028020
    86767 2guf:A (1.95) BS06 MPG ? GO:0005509 ... P06129 17028020
    86768 2guf:A (1.95) BS07 MPG ? GO:0005509 ... P06129 17028020
    86769 2guf:A (1.95) BS08 MPG ? GO:0005509 ... P06129 17028020
    86770 2guf:A (1.95) BS09 MPG ? GO:0005509 ... P06129 17028020
    86771 2guf:A (1.95) BS10 MPG ? GO:0005509 ... P06129 17028020
    86772 2gui:A (1.6) BS01 MN 2.7.7.7 GO:0003676 ... P03007 N/A
    86773 2gui:A (1.6) BS02 U5P 2.7.7.7 GO:0003676 ... P03007 N/A
    86774 2gui:A (1.6) BS03 U5P 2.7.7.7 GO:0003676 ... P03007 N/A
    86775 2guo:A (1.9) BS01 peptide ? N/A P04439 17719062
    86776 2guo:D (1.9) BS01 peptide ? N/A P04439 17719062
    86777 2gup:A (2.01) BS01 FRU ? N/A A0A0H2USG4 N/A
    86778 2gup:A (2.01) BS02 FRU ? N/A A0A0H2USG4 N/A
    86779 2guu:A (1.86) BS01 UP6 N/A GO:0004590 ... N/A N/A
    86780 2guy:A (1.59) BS01 CA 3.2.1.1 GO:0004556 ... P0C1B3 16880540
    86781 2gv2:A (1.8) BS01 peptide 2.3.2.27 GO:0005634 ... Q00987 16925398
    86782 2gv6:A (2.1) BS01 730 3.4.21.109 GO:0004252 ... Q9Y5Y6 16821772 MOAD: Ki=0.046uM
    86783 2gv7:A (2.2) BS01 672 3.4.21.109 GO:0004252 ... Q9Y5Y6 16821772 MOAD: Ki=0.014uM
    BindingDB: Ki=14nM
    86784 2gv8:A (2.1) BS01 FAD 1.14.13.- GO:0004497 ... Q9HFE4 16777962
    86785 2gv8:A (2.1) BS02 NDP 1.14.13.- GO:0004497 ... Q9HFE4 16777962
    86786 2gv8:B (2.1) BS01 FAD 1.14.13.- GO:0004497 ... Q9HFE4 16777962
    86787 2gv8:B (2.1) BS02 NDP 1.14.13.- GO:0004497 ... Q9HFE4 16777962
    86788 2gvc:A (2.22) BS01 FAD 1.14.13.- GO:0004497 ... Q9HFE4 16777962
    86789 2gvc:B (2.22) BS01 FAD 1.14.13.- GO:0004497 ... Q9HFE4 16777962
    86790 2gvc:D (2.22) BS01 FAD 1.14.13.- GO:0004497 ... Q9HFE4 16777962
    86791 2gvc:E (2.22) BS01 FAD 1.14.13.- GO:0004497 ... Q9HFE4 16777962
    86792 2gvd:A (2.9) BS01 MN 4.6.1.1 GO:0009190 ... P30803 16766715
    86793 2gvd:A (2.9) BS02 MN 4.6.1.1 GO:0009190 ... P30803 16766715
    86794 2gvd:A (2.9) BS03 FKP 4.6.1.1 GO:0009190 ... P30803 16766715
    86795 2gvd:A (2.9) BS04 128 4.6.1.1 GO:0009190 ... P30803 16766715
    86796 2gvd:B (2.9) BS01 FKP 4.6.1.1 GO:0009190 ... P26769 16766715
    86797 2gvd:B (2.9) BS02 128 4.6.1.1 GO:0009190 ... P26769 16766715
    86798 2gvd:C (2.9) BS01 MN ? GO:0003924 ... P04896 16766715
    86799 2gvd:C (2.9) BS02 GSP ? GO:0003924 ... P04896 16766715
    86800 2gve:A (2.2) BS01 CO 5.3.1.5 GO:0000287 ... P24300 16707576

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).