SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4331 4332 4333 4334 4335 4336 4337 4338 4339 4340 4341 4342 4343 4344 4345 4346 4347 4348 4349 4350 4351 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    868001 8rj6:B (1.9) BS02 AMP N/A GO:0000287 ... P69441 39121211
    868002 8rj7:C (2.1) BS01 LYS N/A N/A P0DTC2 N/A
    868003 8rj9:A (1.59) BS01 ADP N/A GO:0000287 ... P69441 39121211
    868004 8rj9:A (1.59) BS02 ADP N/A GO:0000287 ... P69441 39121211
    868005 8rj9:B (1.59) BS01 ADP N/A GO:0000287 ... P69441 39121211
    868006 8rj9:B (1.59) BS02 ADP N/A GO:0000287 ... P69441 39121211
    868007 8rja:A (1.97) BS01 ZN N/A GO:0004038 ... A0A7R9MYH2 N/A
    868008 8rja:A (1.97) BS02 ZN N/A GO:0004038 ... A0A7R9MYH2 N/A
    868009 8rja:B (1.97) BS01 SF4 N/A GO:0003954 ... A0A7R9R4U5 N/A
    868010 8rja:B (1.97) BS02 MGD N/A GO:0003954 ... A0A7R9R4U5 N/A
    868011 8rja:B (1.97) BS03 MGD N/A GO:0003954 ... A0A7R9R4U5 N/A
    868012 8rja:D (1.97) BS01 MGD N/A GO:0016491 ... A0A7R9R4V6 N/A
    868013 8rja:D (1.97) BS02 MGD N/A GO:0016491 ... A0A7R9R4V6 N/A
    868014 8rja:E (1.97) BS01 SF4 N/A GO:0000166 ... A0A7R9N9K9 N/A
    868015 8rja:E (1.97) BS02 SF4 N/A GO:0000166 ... A0A7R9N9K9 N/A
    868016 8rja:E (1.97) BS03 FAD N/A GO:0000166 ... A0A7R9N9K9 N/A
    868017 8rja:E (1.97) BS04 SF4 N/A GO:0000166 ... A0A7R9N9K9 N/A
    868018 8rja:F (1.97) BS01 SF4 N/A GO:0016491 ... A0A7R9MZV2 N/A
    868019 8rja:F (1.97) BS02 SF4 N/A GO:0016491 ... A0A7R9MZV2 N/A
    868020 8rja:G (1.97) BS01 ZN N/A GO:0004038 ... A0A7R9MYH2 N/A
    868021 8rja:G (1.97) BS02 ZN N/A GO:0004038 ... A0A7R9MYH2 N/A
    868022 8rja:H (1.97) BS01 SF4 N/A GO:0003954 ... A0A7R9R4U5 N/A
    868023 8rja:H (1.97) BS02 MGD N/A GO:0003954 ... A0A7R9R4U5 N/A
    868024 8rja:H (1.97) BS03 MGD N/A GO:0003954 ... A0A7R9R4U5 N/A
    868025 8rja:J (1.97) BS01 MGD N/A GO:0016491 ... A0A7R9R4V6 N/A
    868026 8rja:J (1.97) BS02 MGD N/A GO:0016491 ... A0A7R9R4V6 N/A
    868027 8rja:K (1.97) BS01 SF4 N/A GO:0000166 ... A0A7R9N9K9 N/A
    868028 8rja:K (1.97) BS02 SF4 N/A GO:0000166 ... A0A7R9N9K9 N/A
    868029 8rja:K (1.97) BS03 FAD N/A GO:0000166 ... A0A7R9N9K9 N/A
    868030 8rja:K (1.97) BS04 SF4 N/A GO:0000166 ... A0A7R9N9K9 N/A
    868031 8rja:L (1.97) BS01 SF4 N/A GO:0016491 ... A0A7R9MZV2 N/A
    868032 8rja:L (1.97) BS02 SF4 N/A GO:0016491 ... A0A7R9MZV2 N/A
    868033 8rjb:1 (2.69243) BS01 rna ? GO:0005048 ... P38377 38896445
    868034 8rjb:4 (2.69243) BS01 rna ? GO:0001501 ... A0A8I3PRN4 38896445
    868035 8rjb:A (2.69243) BS01 rna ? GO:0002181 ... G1TT27 38896445
    868036 8rjb:C (2.69243) BS01 peptide ? GO:0003735 ... G1SVW5 38896445
    868037 8rjb:C (2.69243) BS02 rna ? GO:0003735 ... G1SVW5 38896445
    868038 8rjb:C (2.69243) BS03 rna ? GO:0003735 ... G1SVW5 38896445
    868039 8rjb:D (2.69243) BS01 rna ? GO:0000027 ... P19949 38896445
    868040 8rjb:D (2.69243) BS02 rna ? GO:0000027 ... P19949 38896445
    868041 8rjb:E (2.69243) BS01 rna ? GO:0000027 ... G1SKF7 38896445
    868042 8rjb:F (2.69243) BS01 rna ? GO:0000463 ... G1SV32 38896445
    868043 8rjb:F (2.69243) BS02 rna ? GO:0000463 ... G1SV32 38896445
    868044 8rjb:G (2.69243) BS01 rna ? GO:0003723 ... G1STW0 38896445
    868045 8rjb:G (2.69243) BS02 rna ? GO:0003723 ... G1STW0 38896445
    868046 8rjb:H (2.69243) BS01 rna ? GO:0002181 ... G1SWI6 38896445
    868047 8rjb:I (2.69243) BS01 rna ? GO:0003735 ... B7NZQ2 38896445
    868048 8rjb:I (2.69243) BS02 rna ? GO:0003735 ... B7NZQ2 38896445
    868049 8rjb:J (2.69243) BS01 rna ? GO:0003735 ... G1TUB8 38896445
    868050 8rjb:J (2.69243) BS02 rna ? GO:0003735 ... G1TUB8 38896445
    868051 8rjb:J (2.69243) BS03 rna ? GO:0003735 ... G1TUB8 38896445
    868052 8rjb:L (2.69243) BS01 rna ? GO:0003735 ... G1TKB3 38896445
    868053 8rjb:L (2.69243) BS02 rna ? GO:0003735 ... G1TKB3 38896445
    868054 8rjb:M (2.69243) BS01 rna ? GO:0003723 ... G1SZ12 38896445
    868055 8rjb:N (2.69243) BS01 rna ? GO:0002181 ... G1T0C1 38896445
    868056 8rjb:N (2.69243) BS02 rna ? GO:0002181 ... G1T0C1 38896445
    868057 8rjb:O (2.69243) BS01 rna N/A GO:0003729 ... G1TVS8 38896445
    868058 8rjb:P (2.69243) BS01 rna ? GO:0002181 ... G1SCJ6 38896445
    868059 8rjb:P (2.69243) BS02 rna ? GO:0002181 ... G1SCJ6 38896445
    868060 8rjb:Q (2.69243) BS01 rna N/A GO:0003723 ... G1TFE0 38896445
    868061 8rjb:R (2.69243) BS01 rna ? GO:0003723 ... G1TJR3 38896445
    868062 8rjb:S (2.69243) BS01 rna ? GO:0003735 ... G1TTY7 38896445
    868063 8rjb:S (2.69243) BS02 rna ? GO:0003735 ... G1TTY7 38896445
    868064 8rjb:T (2.69243) BS01 rna ? GO:0003735 ... G1SHQ2 38896445
    868065 8rjb:T (2.69243) BS02 rna ? GO:0003735 ... G1SHQ2 38896445
    868066 8rjb:U (2.69243) BS01 rna ? GO:0002181 ... G1TSG1 38896445
    868067 8rjb:V (2.69243) BS01 rna ? GO:0003735 ... G1T6D1 38896445
    868068 8rjb:W (2.69243) BS01 rna ? GO:0000027 ... G1SE28 38896445
    868069 8rjb:X (2.69243) BS01 rna ? GO:0003735 ... G1SE76 38896445
    868070 8rjb:X (2.69243) BS02 rna ? GO:0003735 ... G1SE76 38896445
    868071 8rjb:Y (2.69243) BS01 rna ? GO:0003723 ... G1SQH0 38896445
    868072 8rjb:Y (2.69243) BS02 rna ? GO:0003723 ... G1SQH0 38896445
    868073 8rjb:Z (2.69243) BS01 rna ? GO:0003735 ... G1TXF6 38896445
    868074 8rjb:a (2.69243) BS01 rna ? GO:0003735 ... G1SNY0 38896445
    868075 8rjb:b (2.69243) BS01 rna ? GO:0002181 ... G1SGR6 38896445
    868076 8rjb:c (2.69243) BS01 rna ? GO:0002181 ... G1TDL2 38896445
    868077 8rjb:d (2.69243) BS01 rna ? GO:0002181 ... G1SHG0 38896445
    868078 8rjb:e (2.69243) BS01 rna ? GO:0003735 ... G1TUN8 38896445
    868079 8rjb:f (2.69243) BS01 rna ? GO:0000049 ... G1SF08 38896445
    868080 8rjb:g (2.69243) BS01 rna ? GO:0003735 ... G1TXG5 38896445
    868081 8rjb:g (2.69243) BS02 ZN ? GO:0003735 ... G1TXG5 38896445
    868082 8rjb:g (2.69243) BS03 MG ? GO:0003735 ... G1TXG5 38896445
    868083 8rjb:h (2.69243) BS01 rna ? GO:0000463 ... G1SIT5 38896445
    868084 8rjb:h (2.69243) BS02 rna ? GO:0000463 ... G1SIT5 38896445
    868085 8rjb:i (2.69243) BS01 rna ? GO:0003735 ... G1TTQ5 38896445
    868086 8rjb:j (2.69243) BS01 rna ? GO:0003723 ... U3KPD5 38896445
    868087 8rjb:j (2.69243) BS02 rna ? GO:0003723 ... U3KPD5 38896445
    868088 8rjb:j (2.69243) BS03 ZN ? GO:0003723 ... U3KPD5 38896445
    868089 8rjb:k (2.69243) BS01 rna ? GO:0003735 ... G1U001 38896445
    868090 8rjb:l (2.69243) BS01 peptide ? GO:0003735 ... G1TTN1 38896445
    868091 8rjb:l (2.69243) BS02 rna ? GO:0003735 ... G1TTN1 38896445
    868092 8rjb:l (2.69243) BS03 rna ? GO:0003735 ... G1TTN1 38896445
    868093 8rjb:m (2.69243) BS01 rna N/A GO:0003735 ... P0DXC2 38896445
    868094 8rjb:m (2.69243) BS02 ZN N/A GO:0003735 ... P0DXC2 38896445
    868095 8rjb:o (2.69243) BS01 rna ? GO:0003735 ... G1T040 38896445
    868096 8rjb:o (2.69243) BS02 ZN ? GO:0003735 ... G1T040 38896445
    868097 8rjb:p (2.69243) BS01 rna ? GO:0003735 ... G1SY53 38896445
    868098 8rjb:p (2.69243) BS02 ZN ? GO:0003735 ... G1SY53 38896445
    868099 8rjb:r (2.69243) BS01 rna ? GO:0003735 ... G1U7L1 38896445
    868100 8rjb:w (2.69243) BS01 rna ? GO:0003723 ... G1TL06 38896445
    868101 8rjc:1 (2.90061) BS01 rna ? GO:0005048 ... P38377 38896445
    868102 8rjc:4 (2.90061) BS01 rna ? GO:0001501 ... A0A8I3PRN4 38896445
    868103 8rjc:5 (2.90061) BS01 rna ? GO:0005789 ... P16967 38896445
    868104 8rjc:7 (2.90061) BS01 rna ? GO:0005783 ... A0A8C0T6I4 38896445
    868105 8rjc:A (2.90061) BS01 rna ? GO:0002181 ... G1TT27 38896445
    868106 8rjc:B (2.90061) BS01 rna N/A GO:0003779 ... P02699 38896445
    868107 8rjc:C (2.90061) BS01 rna ? GO:0003735 ... G1SVW5 38896445
    868108 8rjc:C (2.90061) BS02 rna ? GO:0003735 ... G1SVW5 38896445
    868109 8rjc:D (2.90061) BS01 rna ? GO:0000027 ... P19949 38896445
    868110 8rjc:D (2.90061) BS02 rna ? GO:0000027 ... P19949 38896445
    868111 8rjc:E (2.90061) BS01 rna ? GO:0000027 ... G1SKF7 38896445
    868112 8rjc:F (2.90061) BS01 rna ? GO:0000463 ... G1SV32 38896445
    868113 8rjc:F (2.90061) BS02 rna ? GO:0000463 ... G1SV32 38896445
    868114 8rjc:G (2.90061) BS01 rna ? GO:0003723 ... G1STW0 38896445
    868115 8rjc:G (2.90061) BS02 rna ? GO:0003723 ... G1STW0 38896445
    868116 8rjc:H (2.90061) BS01 rna ? GO:0002181 ... G1SWI6 38896445
    868117 8rjc:I (2.90061) BS01 rna ? GO:0003735 ... B7NZQ2 38896445
    868118 8rjc:I (2.90061) BS02 rna ? GO:0003735 ... B7NZQ2 38896445
    868119 8rjc:J (2.90061) BS01 rna ? GO:0003735 ... G1TUB8 38896445
    868120 8rjc:J (2.90061) BS02 rna ? GO:0003735 ... G1TUB8 38896445
    868121 8rjc:L (2.90061) BS01 rna ? GO:0003723 ... G1TKB3 38896445
    868122 8rjc:L (2.90061) BS02 rna ? GO:0003723 ... G1TKB3 38896445
    868123 8rjc:M (2.90061) BS01 rna ? GO:0003723 ... G1SZ12 38896445
    868124 8rjc:N (2.90061) BS01 rna ? GO:0002181 ... G1T0C1 38896445
    868125 8rjc:N (2.90061) BS02 rna ? GO:0002181 ... G1T0C1 38896445
    868126 8rjc:O (2.90061) BS01 rna N/A GO:0003729 ... G1TVS8 38896445
    868127 8rjc:P (2.90061) BS01 rna ? GO:0002181 ... G1SCJ6 38896445
    868128 8rjc:P (2.90061) BS02 rna ? GO:0002181 ... G1SCJ6 38896445
    868129 8rjc:Q (2.90061) BS01 rna ? GO:0003723 ... G1TFE0 38896445
    868130 8rjc:R (2.90061) BS01 rna ? GO:0003723 ... G1TJR3 38896445
    868131 8rjc:S (2.90061) BS01 rna ? GO:0003735 ... G1TTY7 38896445
    868132 8rjc:S (2.90061) BS02 rna ? GO:0003735 ... G1TTY7 38896445
    868133 8rjc:T (2.90061) BS01 rna ? GO:0003735 ... G1SHQ2 38896445
    868134 8rjc:T (2.90061) BS02 rna ? GO:0003735 ... G1SHQ2 38896445
    868135 8rjc:U (2.90061) BS01 rna ? GO:0002181 ... G1TSG1 38896445
    868136 8rjc:V (2.90061) BS01 rna ? GO:0003735 ... G1T6D1 38896445
    868137 8rjc:W (2.90061) BS01 rna ? GO:0000027 ... G1SE28 38896445
    868138 8rjc:X (2.90061) BS01 rna ? GO:0003735 ... G1SE76 38896445
    868139 8rjc:X (2.90061) BS02 rna ? GO:0003735 ... G1SE76 38896445
    868140 8rjc:Y (2.90061) BS01 rna ? GO:0003723 ... G1SQH0 38896445
    868141 8rjc:Y (2.90061) BS02 rna ? GO:0003723 ... G1SQH0 38896445
    868142 8rjc:Z (2.90061) BS01 rna ? GO:0003735 ... G1TXF6 38896445
    868143 8rjc:a (2.90061) BS01 rna ? GO:0003735 ... G1SNY0 38896445
    868144 8rjc:b (2.90061) BS01 rna ? GO:0002181 ... G1SGR6 38896445
    868145 8rjc:c (2.90061) BS01 rna ? GO:0002181 ... G1TDL2 38896445
    868146 8rjc:d (2.90061) BS01 rna ? GO:0002181 ... G1SHG0 38896445
    868147 8rjc:e (2.90061) BS01 rna ? GO:0003735 ... G1TUN8 38896445
    868148 8rjc:f (2.90061) BS01 rna ? GO:0000049 ... G1SF08 38896445
    868149 8rjc:g (2.90061) BS01 rna ? GO:0003735 ... G1TXG5 38896445
    868150 8rjc:g (2.90061) BS02 MG ? GO:0003735 ... G1TXG5 38896445
    868151 8rjc:g (2.90061) BS03 ZN ? GO:0003735 ... G1TXG5 38896445
    868152 8rjc:h (2.90061) BS01 rna ? GO:0000463 ... G1SIT5 38896445
    868153 8rjc:h (2.90061) BS02 rna ? GO:0000463 ... G1SIT5 38896445
    868154 8rjc:i (2.90061) BS01 rna ? GO:0003735 ... G1TTQ5 38896445
    868155 8rjc:j (2.90061) BS01 rna ? GO:0003723 ... U3KPD5 38896445
    868156 8rjc:j (2.90061) BS02 rna ? GO:0003723 ... U3KPD5 38896445
    868157 8rjc:j (2.90061) BS03 ZN ? GO:0003723 ... U3KPD5 38896445
    868158 8rjc:k (2.90061) BS01 rna ? GO:0003735 ... G1U001 38896445
    868159 8rjc:l (2.90061) BS01 rna ? GO:0003735 ... G1TTN1 38896445
    868160 8rjc:l (2.90061) BS02 rna ? GO:0003735 ... G1TTN1 38896445
    868161 8rjc:m (2.90061) BS01 rna N/A GO:0003735 ... P0DXC2 38896445
    868162 8rjc:m (2.90061) BS02 ZN N/A GO:0003735 ... P0DXC2 38896445
    868163 8rjc:o (2.90061) BS01 rna ? GO:0003735 ... G1T040 38896445
    868164 8rjc:o (2.90061) BS02 ZN ? GO:0003735 ... G1T040 38896445
    868165 8rjc:p (2.90061) BS01 rna ? GO:0003735 ... G1SY53 38896445
    868166 8rjc:p (2.90061) BS02 ZN ? GO:0003735 ... G1SY53 38896445
    868167 8rjc:r (2.90061) BS01 rna ? GO:0003735 ... G1U7L1 38896445
    868168 8rjc:w (2.90061) BS01 rna ? GO:0003723 ... G1TL06 38896445
    868169 8rjd:1 (2.78574) BS01 rna ? GO:0005048 ... P38377 38896445
    868170 8rjd:4 (2.78574) BS01 rna ? GO:0001501 ... A0A8I3PRN4 38896445
    868171 8rjd:5 (2.78574) BS01 rna ? GO:0005789 ... P16967 38896445
    868172 8rjd:7 (2.78574) BS01 rna ? GO:0005783 ... A0A8C0T6I4 38896445
    868173 8rjd:A (2.78574) BS01 rna ? GO:0002181 ... G1TT27 38896445
    868174 8rjd:B (2.78574) BS01 rna N/A GO:0003779 ... P02699 38896445
    868175 8rjd:C (2.78574) BS01 rna ? GO:0003735 ... G1SVW5 38896445
    868176 8rjd:C (2.78574) BS02 rna ? GO:0003735 ... G1SVW5 38896445
    868177 8rjd:D (2.78574) BS01 rna ? GO:0000027 ... P19949 38896445
    868178 8rjd:D (2.78574) BS02 rna ? GO:0000027 ... P19949 38896445
    868179 8rjd:E (2.78574) BS01 rna ? GO:0000027 ... G1SKF7 38896445
    868180 8rjd:F (2.78574) BS01 rna ? GO:0000463 ... G1SV32 38896445
    868181 8rjd:F (2.78574) BS02 rna ? GO:0000463 ... G1SV32 38896445
    868182 8rjd:G (2.78574) BS01 rna ? GO:0003723 ... G1STW0 38896445
    868183 8rjd:G (2.78574) BS02 rna ? GO:0003723 ... G1STW0 38896445
    868184 8rjd:H (2.78574) BS01 rna ? GO:0002181 ... G1SWI6 38896445
    868185 8rjd:I (2.78574) BS01 rna ? GO:0003735 ... B7NZQ2 38896445
    868186 8rjd:I (2.78574) BS02 rna ? GO:0003735 ... B7NZQ2 38896445
    868187 8rjd:J (2.78574) BS01 rna ? GO:0003735 ... G1TUB8 38896445
    868188 8rjd:J (2.78574) BS02 rna ? GO:0003735 ... G1TUB8 38896445
    868189 8rjd:J (2.78574) BS03 rna ? GO:0003735 ... G1TUB8 38896445
    868190 8rjd:L (2.78574) BS01 rna ? GO:0003735 ... G1TKB3 38896445
    868191 8rjd:L (2.78574) BS02 rna ? GO:0003735 ... G1TKB3 38896445
    868192 8rjd:M (2.78574) BS01 rna ? GO:0003723 ... G1SZ12 38896445
    868193 8rjd:N (2.78574) BS01 rna ? GO:0002181 ... G1T0C1 38896445
    868194 8rjd:N (2.78574) BS02 rna ? GO:0002181 ... G1T0C1 38896445
    868195 8rjd:O (2.78574) BS01 rna ? GO:0003729 ... G1TVS8 38896445
    868196 8rjd:P (2.78574) BS01 rna ? GO:0002181 ... G1SCJ6 38896445
    868197 8rjd:P (2.78574) BS02 rna ? GO:0002181 ... G1SCJ6 38896445
    868198 8rjd:Q (2.78574) BS01 rna ? GO:0003723 ... G1TFE0 38896445
    868199 8rjd:R (2.78574) BS01 rna ? GO:0003723 ... G1TYL6 38896445
    868200 8rjd:S (2.78574) BS01 rna ? GO:0003735 ... G1TTY7 38896445

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).