SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4343 4344 4345 4346 4347 4348 4349 4350 4351 4352 4353 4354 4355 4356 4357 4358 4359 4360 4361 4362 4363 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    870401 8r6k:C (2.19) BS01 Y78 N/A N/A Q6FWV7 39821709
    870402 8r6m:A (1.95) BS01 1GH N/A N/A Q6FWV7 39821709
    870403 8r6m:B (1.95) BS01 1GH N/A N/A Q6FWV7 39821709
    870404 8r6m:C (1.95) BS01 1GH N/A N/A Q6FWV7 39821709
    870405 8r6m:D (1.95) BS01 1GH N/A N/A Q6FWV7 39821709
    870406 8r6n:A (2.11) BS01 Y7B N/A N/A Q6FWV7 39821709
    870407 8r6o:A (2.2) BS01 GTP N/A GO:0000226 ... P81947 39509402
    870408 8r6o:A (2.2) BS02 CA N/A GO:0000226 ... P81947 39509402
    870409 8r6o:A (2.2) BS03 RME N/A GO:0000226 ... P81947 39509402
    870410 8r6o:B (2.2) BS01 GDP N/A GO:0000226 ... Q6B856 39509402
    870411 8r6o:B (2.2) BS02 RME N/A GO:0000226 ... Q6B856 39509402
    870412 8r6o:C (2.2) BS01 GTP N/A GO:0000226 ... P81947 39509402
    870413 8r6o:C (2.2) BS02 CA N/A GO:0000226 ... P81947 39509402
    870414 8r6o:D (2.2) BS01 GDP N/A GO:0000226 ... Q6B856 39509402
    870415 8r6o:D (2.2) BS02 RME N/A GO:0000226 ... Q6B856 39509402
    870416 8r6o:F (2.2) BS01 ACP N/A GO:0000226 ... A0A8V0Z8P0 39509402
    870417 8r6o:F (2.2) BS02 MG N/A GO:0000226 ... A0A8V0Z8P0 39509402
    870418 8r6p:D (3.16) BS01 dna N/A GO:0000287 ... A0QS66 39384756
    870419 8r6p:D (3.16) BS02 ZN N/A GO:0000287 ... A0QS66 39384756
    870420 8r6p:D (3.16) BS03 ZN N/A GO:0000287 ... A0QS66 39384756
    870421 8r6p:D (3.16) BS04 MG N/A GO:0000287 ... A0QS66 39384756
    870422 8r6p:F (3.16) BS01 dna N/A GO:0003677 ... A0QW02 39384756
    870423 8r6p:F (3.16) BS02 dna N/A GO:0003677 ... A0QW02 39384756
    870424 8r6q:A () BS01 WEW ? N/A N/A N/A
    870425 8r6q:B () BS01 WEW ? N/A N/A N/A
    870426 8r6r:D (3.89) BS01 dna N/A GO:0000287 ... A0QS66 39384756
    870427 8r6r:D (3.89) BS02 dna N/A GO:0000287 ... A0QS66 39384756
    870428 8r6r:D (3.89) BS03 ZN N/A GO:0000287 ... A0QS66 39384756
    870429 8r6r:D (3.89) BS04 ZN N/A GO:0000287 ... A0QS66 39384756
    870430 8r6r:D (3.89) BS05 MG N/A GO:0000287 ... A0QS66 39384756
    870431 8r6r:F (3.89) BS01 dna N/A GO:0003677 ... A0QW02 39384756
    870432 8r6r:F (3.89) BS02 dna N/A GO:0003677 ... A0QW02 39384756
    870433 8r6s:E (2.49) BS01 ZN 2.7.7.6 GO:0003677 ... A0A6C0M829 38428394
    870434 8r6s:I (2.49) BS01 FE N/A GO:0004784 ... N/A 38428394
    870435 8r6s:L (2.49) BS01 SAH N/A N/A N/A 38428394
    870436 8r6s:N (2.49) BS01 FE N/A GO:0004784 ... N/A 38428394
    870437 8r6u:A (2.98) BS01 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870438 8r6u:A (2.98) BS02 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870439 8r6u:A (2.98) BS03 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870440 8r6u:A (2.98) BS04 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870441 8r6u:A (2.98) BS05 MG 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870442 8r6v:A (2.5) BS01 KDH N/A GO:0004645 ... P00489 39433280
    870443 8r6v:A (2.5) BS02 CFF N/A GO:0004645 ... P00489 39433280
    870444 8r6w:A (3.35) BS01 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870445 8r6w:A (3.35) BS02 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870446 8r6w:A (3.35) BS03 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870447 8r6w:A (3.35) BS04 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870448 8r6y:A (3.4) BS01 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870449 8r6y:A (3.4) BS02 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870450 8r6y:A (3.4) BS03 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870451 8r6y:A (3.4) BS04 rna 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870452 8r6y:A (3.4) BS05 2KH 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870453 8r6y:A (3.4) BS06 MG 2.7.7.48 GO:0001172 ... I0DF35 38709882
    870454 8r6z:A (2.03) BS01 ZN N/A GO:0016829 ... Q89ZG7 39932998
    870455 8r6z:B (2.03) BS01 ZN N/A GO:0016829 ... Q89ZG7 39932998
    870456 8r70:A (1.797) BS01 BDP N/A GO:0016829 ... Q89ZG7 39932998
    870457 8r70:A (1.797) BS02 P4K N/A GO:0016829 ... Q89ZG7 39932998
    870458 8r70:A (1.797) BS03 ZN N/A GO:0016829 ... Q89ZG7 39932998
    870459 8r70:B (1.797) BS01 BDP N/A GO:0016829 ... Q89ZG7 39932998
    870460 8r70:B (1.797) BS02 P4K N/A GO:0016829 ... Q89ZG7 39932998
    870461 8r70:B (1.797) BS03 ZN N/A GO:0016829 ... Q89ZG7 39932998
    870462 8r71:A (1.92) BS01 BDP N/A GO:0016829 ... Q89ZG7 39932998
    870463 8r71:A (1.92) BS02 P4K N/A GO:0016829 ... Q89ZG7 39932998
    870464 8r71:A (1.92) BS03 ZN N/A GO:0016829 ... Q89ZG7 39932998
    870465 8r71:B (1.92) BS01 BDP N/A GO:0016829 ... Q89ZG7 39932998
    870466 8r71:B (1.92) BS02 P4K N/A GO:0016829 ... Q89ZG7 39932998
    870467 8r71:B (1.92) BS03 ZN N/A GO:0016829 ... Q89ZG7 39932998
    870468 8r72:A (2.58) BS01 BDP N/A GO:0016829 ... Q89ZG7 39932998
    870469 8r72:A (2.58) BS02 ZN N/A GO:0016829 ... Q89ZG7 39932998
    870470 8r72:B (2.58) BS01 BDP N/A GO:0016829 ... Q89ZG7 39932998
    870471 8r72:B (2.58) BS02 ZN N/A GO:0016829 ... Q89ZG7 39932998
    870472 8r73:A (2.11) BS01 ZN N/A GO:0016829 ... A0A0P0GKX0 39932998
    870473 8r74:A (1.54) BS01 YBC ? GO:0003723 ... P09382 38804039
    870474 8r74:B (1.54) BS01 YBC ? GO:0003723 ... P09382 38804039
    870475 8r75:A (2.7) BS01 ZN N/A GO:0016829 ... Q89ZG7 39932998
    870476 8r75:B (2.7) BS01 ZN N/A GO:0016829 ... Q89ZG7 39932998
    870477 8r7b:A (2.18) BS01 ZN N/A GO:0000175 ... P0DTD1 39663451
    870478 8r7b:A (2.18) BS02 ZN N/A GO:0000175 ... P0DTD1 39663451
    870479 8r7b:A (2.18) BS03 ZN N/A GO:0000175 ... P0DTD1 39663451
    870480 8r7b:A (2.18) BS04 SAH N/A GO:0000175 ... P0DTD1 39663451
    870481 8r7b:A (2.18) BS05 YDT N/A GO:0000175 ... P0DTD1 39663451
    870482 8r7b:B (2.18) BS01 ZN N/A GO:0000175 ... P0DTD1 39663451
    870483 8r7b:B (2.18) BS02 ZN N/A GO:0000175 ... P0DTD1 39663451
    870484 8r7b:B (2.18) BS03 ZN N/A GO:0000175 ... P0DTD1 39663451
    870485 8r7b:B (2.18) BS04 SAH N/A GO:0000175 ... P0DTD1 39663451
    870486 8r7b:B (2.18) BS05 YDT N/A GO:0000175 ... P0DTD1 39663451
    870487 8r7c:A (2.82) BS01 dna N/A GO:0000287 ... P43246 N/A
    870488 8r7c:A (2.82) BS02 dna N/A GO:0000287 ... P43246 N/A
    870489 8r7c:A (2.82) BS03 ADP N/A GO:0000287 ... P43246 N/A
    870490 8r7c:A (2.82) BS04 YKW N/A GO:0000287 ... P43246 N/A
    870491 8r7c:B (2.82) BS01 dna N/A GO:0005524 ... P20585 N/A
    870492 8r7c:B (2.82) BS02 dna N/A GO:0005524 ... P20585 N/A
    870493 8r7c:B (2.82) BS03 YKW N/A GO:0005524 ... P20585 N/A
    870494 8r7c:E (2.82) BS01 dna N/A GO:0000287 ... P43246 N/A
    870495 8r7c:E (2.82) BS02 dna N/A GO:0000287 ... P43246 N/A
    870496 8r7c:E (2.82) BS03 ADP N/A GO:0000287 ... P43246 N/A
    870497 8r7c:F (2.82) BS01 dna N/A GO:0005524 ... P20585 N/A
    870498 8r7c:F (2.82) BS02 dna N/A GO:0005524 ... P20585 N/A
    870499 8r7c:F (2.82) BS03 YKW N/A GO:0005524 ... P20585 N/A
    870500 8r7e:A (2.783) BS01 dna N/A GO:0000287 ... P43246 N/A
    870501 8r7e:A (2.783) BS02 ADP N/A GO:0000287 ... P43246 N/A
    870502 8r7e:B (2.783) BS01 dna N/A GO:0005524 ... P20585 N/A
    870503 8r7e:B (2.783) BS02 dna N/A GO:0005524 ... P20585 N/A
    870504 8r7e:B (2.783) BS03 YKQ N/A GO:0005524 ... P20585 N/A
    870505 8r7e:E (2.783) BS01 dna N/A GO:0000287 ... P43246 N/A
    870506 8r7e:E (2.783) BS02 dna N/A GO:0000287 ... P43246 N/A
    870507 8r7e:E (2.783) BS03 dna N/A GO:0000287 ... P43246 N/A
    870508 8r7e:E (2.783) BS04 ADP N/A GO:0000287 ... P43246 N/A
    870509 8r7e:F (2.783) BS01 dna N/A GO:0005524 ... P20585 N/A
    870510 8r7e:F (2.783) BS02 dna N/A GO:0005524 ... P20585 N/A
    870511 8r7e:F (2.783) BS03 YKQ N/A GO:0005524 ... P20585 N/A
    870512 8r7f:A (1.98) BS01 dna N/A GO:0000981 ... Q9NY43 40205063
    870513 8r7f:A (1.98) BS02 dna N/A GO:0000981 ... Q9NY43 40205063
    870514 8r7f:E (1.98) BS01 dna N/A GO:0000981 ... Q9NY43 40205063
    870515 8r7f:E (1.98) BS02 dna N/A GO:0000981 ... Q9NY43 40205063
    870516 8r7g:A (2.09) BS01 YEE 2.7.11.30 GO:0004672 ... Q04771 32369358
    870517 8r7g:B (2.09) BS01 YEE 2.7.11.30 GO:0004672 ... Q04771 32369358
    870518 8r7g:C (2.09) BS01 YEE 2.7.11.30 GO:0004672 ... Q04771 32369358
    870519 8r7g:D (2.09) BS01 YEE 2.7.11.30 GO:0004672 ... Q04771 32369358
    870520 8r7i:A (1.8) BS01 FUC N/A GO:0005507 ... A0A0S3AND7 39151418
    870521 8r7i:A (1.8) BS02 YKK N/A GO:0005507 ... A0A0S3AND7 39151418
    870522 8r7i:A (1.8) BS03 PLQ N/A GO:0005507 ... A0A0S3AND7 39151418
    870523 8r7i:A (1.8) BS04 YMR N/A GO:0005507 ... A0A0S3AND7 39151418
    870524 8r7i:A (1.8) BS05 CU N/A GO:0005507 ... A0A0S3AND7 39151418
    870525 8r7i:A (1.8) BS06 CU N/A GO:0005507 ... A0A0S3AND7 39151418
    870526 8r7i:A (1.8) BS07 CU N/A GO:0005507 ... A0A0S3AND7 39151418
    870527 8r7i:A (1.8) BS08 CU N/A GO:0005507 ... A0A0S3AND7 39151418
    870528 8r7k:H (3.5) BS01 ANP N/A GO:0000245 ... Q13838 41198879
    870529 8r7l:H (4.12) BS01 peptide N/A GO:0000245 ... Q13838 41198879
    870530 8r7m:A (1.0) BS01 BO3 3.5.2.6 GO:0008800 ... A0A2S1JJX2 38969718
    870531 8r7m:A (1.0) BS02 YCH 3.5.2.6 GO:0008800 ... A0A2S1JJX2 38969718
    870532 8r7n:B (3.4) BS01 rna N/A GO:0000388 ... Q9BV90 39809272
    870533 8r7n:C (3.4) BS01 rna N/A GO:0000388 ... Q16560 39809272
    870534 8r7n:D (3.4) BS01 rna N/A GO:0000388 ... Q8N8D1 39809272
    870535 8r7n:E (3.4) BS01 rna N/A GO:0000388 ... Q9UDW3 39809272
    870536 8r7n:F (3.4) BS01 rna N/A GO:0000388 ... Q6IEG0 39809272
    870537 8r7n:h (3.4) BS01 rna N/A GO:0000243 ... P62314 39809272
    870538 8r7n:i (3.4) BS01 rna N/A GO:0000244 ... P62316 39809272
    870539 8r7n:j (3.4) BS01 rna N/A GO:0000243 ... P62318 39809272
    870540 8r7n:k (3.4) BS01 rna N/A GO:0000244 ... P14678 39809272
    870541 8r7n:l (3.4) BS01 rna N/A GO:0000244 ... P62304 39809272
    870542 8r7n:m (3.4) BS01 rna N/A GO:0000244 ... P62306 39809272
    870543 8r7n:n (3.4) BS01 rna N/A GO:0000244 ... P62308 39809272
    870544 8r7o:A (1.36) BS01 YGC N/A N/A Q7Z6Z7 39048679
    870545 8r7o:C (1.36) BS01 YGC N/A N/A Q7Z6Z7 39048679
    870546 8r7q:C (2.78) BS01 QI9 N/A GO:0005243 ... Q9UKL4 38890333
    870547 8r7q:F (2.78) BS01 QI9 N/A GO:0005243 ... Q9UKL4 38890333
    870548 8r7r:A (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870549 8r7r:B (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870550 8r7r:C (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870551 8r7r:D (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870552 8r7r:E (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870553 8r7r:F (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870554 8r7r:G (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870555 8r7r:H (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870556 8r7r:I (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870557 8r7r:J (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870558 8r7r:K (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870559 8r7r:L (2.97) BS01 QDN N/A GO:0005243 ... Q9UKL4 38890333
    870560 8r7s:A (1.17) BS01 peptide N/A GO:0000413 ... A0A125YL73 39312281
    870561 8r7s:B (1.17) BS01 peptide N/A GO:0000413 ... A0A125YL73 39312281
    870562 8r7t:A (1.2) BS01 peptide N/A GO:0000413 ... A0A125YL73 39312281
    870563 8r7t:B (1.2) BS01 peptide N/A GO:0000413 ... A0A125YL73 39312281
    870564 8r7u:A (1.2) BS01 peptide N/A GO:0000413 ... A0A125YL73 39312281
    870565 8r7u:B (1.2) BS01 peptide N/A GO:0000413 ... A0A125YL73 39312281
    870566 8r7v:A (3.12) BS01 dna N/A GO:0000287 ... P43246 N/A
    870567 8r7v:A (3.12) BS02 MG N/A GO:0000287 ... P43246 N/A
    870568 8r7v:A (3.12) BS03 ADP N/A GO:0000287 ... P43246 N/A
    870569 8r7v:B (3.12) BS01 dna N/A GO:0003690 ... P20585 N/A
    870570 8r7v:B (3.12) BS02 dna N/A GO:0003690 ... P20585 N/A
    870571 8r7v:B (3.12) BS03 YKQ N/A GO:0003690 ... P20585 N/A
    870572 8r7w:A (1.161) BS01 YLE N/A GO:0003924 ... P01116 39009041
    870573 8r7w:A (1.161) BS02 MG N/A GO:0003924 ... P01116 39009041
    870574 8r7w:B (1.161) BS01 YLE N/A GO:0003924 ... P01116 39009041
    870575 8r7w:B (1.161) BS02 MG N/A GO:0003924 ... P01116 39009041
    870576 8r7x:A (1.314) BS01 MG N/A GO:0003924 ... P01116 39009041
    870577 8r7x:B (1.314) BS01 YFJ N/A GO:0003924 ... P01116 39009041
    870578 8r7x:B (1.314) BS02 MG N/A GO:0003924 ... P01116 39009041
    870579 8r7y:A (3.7) BS01 dna N/A GO:0000987 ... P39140 38842936
    870580 8r7y:A (3.7) BS02 dna N/A GO:0000987 ... P39140 38842936
    870581 8r7y:B (3.7) BS01 dna N/A GO:0000987 ... P39140 38842936
    870582 8r7y:B (3.7) BS02 dna N/A GO:0000987 ... P39140 38842936
    870583 8r7y:C (3.7) BS01 dna N/A GO:0000987 ... P39140 38842936
    870584 8r7y:C (3.7) BS02 dna N/A GO:0000987 ... P39140 38842936
    870585 8r7y:D (3.7) BS01 dna N/A GO:0000987 ... P39140 38842936
    870586 8r7y:D (3.7) BS02 dna N/A GO:0000987 ... P39140 38842936
    870587 8r7z:A (3.26) BS01 dna N/A GO:0000981 ... Q9NY43 40205063
    870588 8r7z:A (3.26) BS02 dna N/A GO:0000981 ... Q9NY43 40205063
    870589 8r7z:E (3.26) BS01 dna N/A GO:0000981 ... Q9NY43 40205063
    870590 8r7z:E (3.26) BS02 dna N/A GO:0000981 ... Q9NY43 40205063
    870591 8r7z:G (3.26) BS01 dna N/A GO:0000981 ... Q9NY43 40205063
    870592 8r7z:G (3.26) BS02 dna N/A GO:0000981 ... Q9NY43 40205063
    870593 8r7z:K (3.26) BS01 dna N/A GO:0000981 ... Q9NY43 40205063
    870594 8r81:A (2.45) BS01 Y8B N/A GO:0003677 ... O75469 40885723
    870595 8r82:A (2.1) BS01 Y7Q N/A GO:0003677 ... O75469 40885723
    870596 8r83:N (3.57) BS01 CA N/A GO:0005576 ... O43866 39477921
    870597 8r83:N (3.57) BS02 CA N/A GO:0005576 ... O43866 39477921
    870598 8r84:N (3.6) BS01 CA N/A GO:0005576 ... O43866 39477921
    870599 8r84:N (3.6) BS02 CA N/A GO:0005576 ... O43866 39477921
    870600 8r8a:A (1.317) BS01 GAL ? N/A A0A1S4E5V9 38410776

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).