SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    871201 8rcb:B (2.11) BS01 SF4 N/A GO:0030313 ... Q72EJ0 39148770
    871202 8rcb:B (2.11) BS02 SF4 N/A GO:0030313 ... Q72EJ0 39148770
    871203 8rcb:B (2.11) BS03 SF4 N/A GO:0030313 ... Q72EJ0 39148770
    871204 8rcc:A (2.301) BS01 MGD N/A GO:0005515 ... Q72EJ1 39148770
    871205 8rcc:A (2.301) BS02 MGD N/A GO:0005515 ... Q72EJ1 39148770
    871206 8rcc:A (2.301) BS03 SF4 N/A GO:0005515 ... Q72EJ1 39148770
    871207 8rcc:B (2.301) BS01 SF4 N/A GO:0030313 ... Q72EJ0 39148770
    871208 8rcc:B (2.301) BS02 SF4 N/A GO:0030313 ... Q72EJ0 39148770
    871209 8rcc:B (2.301) BS03 SF4 N/A GO:0030313 ... Q72EJ0 39148770
    871210 8rcd:A (3.2) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871211 8rcd:A (3.2) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871212 8rcd:A (3.2) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871213 8rcd:A (3.2) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871214 8rcd:A (3.2) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871215 8rcd:B (3.2) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871216 8rcd:B (3.2) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871217 8rcd:B (3.2) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871218 8rcd:B (3.2) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871219 8rcd:B (3.2) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871220 8rcd:C (3.2) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871221 8rcd:C (3.2) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871222 8rcd:C (3.2) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871223 8rcd:C (3.2) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871224 8rcd:C (3.2) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871225 8rcd:D (3.2) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871226 8rcd:D (3.2) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871227 8rcd:D (3.2) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871228 8rcd:D (3.2) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871229 8rcd:D (3.2) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871230 8rcd:E (3.2) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871231 8rcd:E (3.2) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871232 8rcd:E (3.2) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871233 8rcd:E (3.2) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871234 8rcd:E (3.2) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871235 8rcd:F (3.2) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871236 8rcd:F (3.2) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871237 8rcd:F (3.2) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871238 8rcd:F (3.2) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871239 8rcd:F (3.2) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871240 8rcd:G (3.2) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871241 8rcd:G (3.2) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871242 8rcd:G (3.2) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871243 8rcd:G (3.2) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871244 8rcd:G (3.2) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871245 8rcd:H (3.2) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871246 8rcd:H (3.2) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871247 8rcd:H (3.2) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871248 8rce:A (3.0) BS01 WUE N/A GO:0003677 ... Q07869 38865743
    871249 8rcf:A (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871250 8rcf:A (3.4) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871251 8rcf:A (3.4) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871252 8rcf:A (3.4) BS04 ATP N/A GO:0000150 ... Q06609 39178838
    871253 8rcf:B (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871254 8rcf:B (3.4) BS02 dna N/A GO:0000150 ... Q06609 39178838
    871255 8rcf:B (3.4) BS03 ATP N/A GO:0000150 ... Q06609 39178838
    871256 8rcf:B (3.4) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871257 8rcf:B (3.4) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871258 8rcf:C (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871259 8rcf:C (3.4) BS02 dna N/A GO:0000150 ... Q06609 39178838
    871260 8rcf:C (3.4) BS03 ATP N/A GO:0000150 ... Q06609 39178838
    871261 8rcf:C (3.4) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871262 8rcf:C (3.4) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871263 8rcf:D (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871264 8rcf:D (3.4) BS02 dna N/A GO:0000150 ... Q06609 39178838
    871265 8rcf:D (3.4) BS03 ATP N/A GO:0000150 ... Q06609 39178838
    871266 8rcf:D (3.4) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871267 8rcf:D (3.4) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871268 8rcf:E (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871269 8rcf:E (3.4) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871270 8rcf:E (3.4) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871271 8rcf:E (3.4) BS04 ATP N/A GO:0000150 ... Q06609 39178838
    871272 8rcf:F (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871273 8rcf:F (3.4) BS02 dna N/A GO:0000150 ... Q06609 39178838
    871274 8rcf:F (3.4) BS03 ATP N/A GO:0000150 ... Q06609 39178838
    871275 8rcf:F (3.4) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871276 8rcf:F (3.4) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871277 8rcf:G (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871278 8rcf:G (3.4) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871279 8rcf:G (3.4) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871280 8rcf:G (3.4) BS04 CA N/A GO:0000150 ... Q06609 39178838
    871281 8rcf:G (3.4) BS05 ATP N/A GO:0000150 ... Q06609 39178838
    871282 8rcf:H (3.4) BS01 dna N/A GO:0000150 ... Q06609 39178838
    871283 8rcf:H (3.4) BS02 ATP N/A GO:0000150 ... Q06609 39178838
    871284 8rcf:H (3.4) BS03 CA N/A GO:0000150 ... Q06609 39178838
    871285 8rcg:A (2.005) BS01 MGD 1.2.1.2 GO:0005515 ... Q72EJ1 38699971
    871286 8rcg:A (2.005) BS02 MGD 1.2.1.2 GO:0005515 ... Q72EJ1 38699971
    871287 8rcg:A (2.005) BS03 SF4 1.2.1.2 GO:0005515 ... Q72EJ1 38699971
    871288 8rcg:B (2.005) BS01 SF4 ? GO:0030313 ... Q72EJ0 38699971
    871289 8rcg:B (2.005) BS02 SF4 ? GO:0030313 ... Q72EJ0 38699971
    871290 8rcg:B (2.005) BS03 SF4 ? GO:0030313 ... Q72EJ0 38699971
    871291 8rch:A (4.0) BS01 ANP N/A GO:0000139 ... P42345 N/A
    871292 8rch:A (4.0) BS02 MG N/A GO:0000139 ... P42345 N/A
    871293 8rch:B (4.0) BS01 ANP N/A GO:0000139 ... P42345 N/A
    871294 8rch:B (4.0) BS02 MG N/A GO:0000139 ... P42345 N/A
    871295 8rch:W (4.0) BS01 peptide N/A GO:0001558 ... Q8N122 N/A
    871296 8rch:Y (4.0) BS01 peptide N/A GO:0001558 ... Q8N122 N/A
    871297 8rci:A (1.5) BS01 ZN N/A GO:0000976 ... P04637 39789211
    871298 8rck:B (3.4) BS01 ANP N/A GO:0000139 ... P42345 N/A
    871299 8rck:B (3.4) BS02 MG N/A GO:0000139 ... P42345 N/A
    871300 8rck:Y (3.4) BS01 peptide N/A GO:0001558 ... Q8N122 N/A
    871301 8rcl:12 (3.49) BS01 rna ? GO:0000027 ... P0A7M2 38409277
    871302 8rcl:32 (3.49) BS01 rna ? GO:0000027 ... P0AG51 38409277
    871303 8rcl:32 (3.49) BS02 rna ? GO:0000027 ... P0AG51 38409277
    871304 8rcl:4 (3.49) BS01 rna ? GO:0002181 ... P0A7M9 38409277
    871305 8rcl:4 (3.49) BS02 rna ? GO:0002181 ... P0A7M9 38409277
    871306 8rcl:4 (3.49) BS03 ZN ? GO:0002181 ... P0A7M9 38409277
    871307 8rcl:62 (3.49) BS01 rna ? GO:0002181 ... P0A7Q1 38409277
    871308 8rcl:B (3.49) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    871309 8rcl:B (3.49) BS02 peptide ? GO:0000028 ... P0A7V0 38409277
    871310 8rcl:B (3.49) BS03 ZN ? GO:0000028 ... P0A7V0 38409277
    871311 8rcl:B2 (3.49) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    871312 8rcl:C1 (3.49) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    871313 8rcl:C1 (3.49) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    871314 8rcl:C2 (3.49) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    871315 8rcl:C2 (3.49) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    871316 8rcl:D1 (3.49) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    871317 8rcl:D2 (3.49) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    871318 8rcl:E1 (3.49) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    871319 8rcl:E1 (3.49) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    871320 8rcl:E2 (3.49) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    871321 8rcl:E2 (3.49) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    871322 8rcl:F1 (3.49) BS01 rna ? GO:0002181 ... P02358 38409277
    871323 8rcl:F2 (3.49) BS01 rna ? GO:0002181 ... P02358 38409277
    871324 8rcl:G1 (3.49) BS01 rna ? GO:0000028 ... P02359 38409277
    871325 8rcl:G1 (3.49) BS02 rna ? GO:0000028 ... P02359 38409277
    871326 8rcl:G2 (3.49) BS01 rna ? GO:0000028 ... P02359 38409277
    871327 8rcl:G2 (3.49) BS02 rna ? GO:0000028 ... P02359 38409277
    871328 8rcl:G2 (3.49) BS03 rna ? GO:0000028 ... P02359 38409277
    871329 8rcl:H1 (3.49) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    871330 8rcl:H2 (3.49) BS01 rna ? GO:0000028 ... P0A7W7 38409277
    871331 8rcl:I1 (3.49) BS01 rna ? GO:0002181 ... P0A7X3 38409277
    871332 8rcl:I1 (3.49) BS02 rna ? GO:0002181 ... P0A7X3 38409277
    871333 8rcl:I2 (3.49) BS01 rna ? GO:0002181 ... P0A7X3 38409277
    871334 8rcl:I2 (3.49) BS02 rna ? GO:0002181 ... P0A7X3 38409277
    871335 8rcl:J1 (3.49) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    871336 8rcl:J2 (3.49) BS01 rna ? GO:0000049 ... P0A7R5 38409277
    871337 8rcl:K1 (3.49) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    871338 8rcl:K2 (3.49) BS01 rna ? GO:0002181 ... P0A7R9 38409277
    871339 8rcl:L1 (3.49) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    871340 8rcl:L2 (3.49) BS01 rna ? GO:0000049 ... P0A7S3 38409277
    871341 8rcl:M1 (3.49) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    871342 8rcl:M2 (3.49) BS01 rna ? GO:0000049 ... P0A7S9 38409277
    871343 8rcl:M2 (3.49) BS02 rna ? GO:0000049 ... P0A7S9 38409277
    871344 8rcl:N1 (3.49) BS01 rna ? GO:0000028 ... P0AG59 38409277
    871345 8rcl:N2 (3.49) BS01 rna ? GO:0000028 ... P0AG59 38409277
    871346 8rcl:O1 (3.49) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    871347 8rcl:O2 (3.49) BS01 rna ? GO:0000028 ... P0ADZ4 38409277
    871348 8rcl:O2 (3.49) BS02 rna ? GO:0000028 ... P0ADZ4 38409277
    871349 8rcl:P1 (3.49) BS01 rna ? GO:0000028 ... P0A7T3 38409277
    871350 8rcl:Q1 (3.49) BS01 rna ? GO:0000028 ... P0AG63 38409277
    871351 8rcl:Q2 (3.49) BS01 rna ? GO:0000028 ... P0AG63 38409277
    871352 8rcl:R1 (3.49) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    871353 8rcl:R2 (3.49) BS01 rna ? GO:0002181 ... P0A7T7 38409277
    871354 8rcl:S1 (3.49) BS01 rna ? GO:0002181 ... P0A7U3 38409277
    871355 8rcl:S2 (3.49) BS01 rna ? GO:0002181 ... P0A7U3 38409277
    871356 8rcl:T1 (3.49) BS01 rna ? GO:0000028 ... P0A7U7 38409277
    871357 8rcl:U1 (3.49) BS01 rna ? GO:0000028 ... P68679 38409277
    871358 8rcl:U1 (3.49) BS02 rna ? GO:0000028 ... P68679 38409277
    871359 8rcl:U2 (3.49) BS01 rna ? GO:0000028 ... P68679 38409277
    871360 8rcl:U2 (3.49) BS02 rna ? GO:0000028 ... P68679 38409277
    871361 8rcl:a2 (3.49) BS01 rna ? GO:0000027 ... P0A7L0 38409277
    871362 8rcl:b2 (3.49) BS01 rna ? GO:0000027 ... P60422 38409277
    871363 8rcl:b2 (3.49) BS02 rna ? GO:0000027 ... P60422 38409277
    871364 8rcl:e2 (3.49) BS01 rna ? GO:0000027 ... P62399 38409277
    871365 8rcl:e2 (3.49) BS02 rna ? GO:0000027 ... P62399 38409277
    871366 8rcl:e2 (3.49) BS03 rna ? GO:0000027 ... P62399 38409277
    871367 8rcl:g2 (3.49) BS01 rna ? GO:0000027 ... P0A7N9 38409277
    871368 8rcl:h2 (3.49) BS01 rna ? GO:0000027 ... P0ADY7 38409277
    871369 8rcl:h2 (3.49) BS02 rna ? GO:0000027 ... P0ADY7 38409277
    871370 8rcl:i2 (3.49) BS01 rna ? GO:0002181 ... P0A7R1 38409277
    871371 8rcl:i2 (3.49) BS02 rna ? GO:0002181 ... P0A7R1 38409277
    871372 8rcl:l2 (3.49) BS01 rna ? GO:0002181 ... P0A7P5 38409277
    871373 8rcl:o2 (3.49) BS01 rna ? GO:0002181 ... P02413 38409277
    871374 8rcl:o2 (3.49) BS02 MG ? GO:0002181 ... P02413 38409277
    871375 8rcl:r2 (3.49) BS01 rna ? GO:0002181 ... P0C018 38409277
    871376 8rcl:r2 (3.49) BS02 rna ? GO:0002181 ... P0C018 38409277
    871377 8rcl:z2 (3.49) BS01 rna ? GO:0000027 ... P0A7L8 38409277
    871378 8rcm:12 (3.59) BS01 rna ? GO:0000027 ... P0A7M2 38409277
    871379 8rcm:32 (3.59) BS01 rna ? GO:0000027 ... P0AG51 38409277
    871380 8rcm:32 (3.59) BS02 rna ? GO:0000027 ... P0AG51 38409277
    871381 8rcm:4 (3.59) BS01 rna ? GO:0002181 ... P0A7M9 38409277
    871382 8rcm:4 (3.59) BS02 rna ? GO:0002181 ... P0A7M9 38409277
    871383 8rcm:4 (3.59) BS03 ZN ? GO:0002181 ... P0A7M9 38409277
    871384 8rcm:62 (3.59) BS01 rna ? GO:0002181 ... P0A7Q1 38409277
    871385 8rcm:B (3.59) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    871386 8rcm:B2 (3.59) BS01 rna ? GO:0000028 ... P0A7V0 38409277
    871387 8rcm:C1 (3.59) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    871388 8rcm:C1 (3.59) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    871389 8rcm:C2 (3.59) BS01 rna ? GO:0000028 ... P0A7V3 38409277
    871390 8rcm:C2 (3.59) BS02 rna ? GO:0000028 ... P0A7V3 38409277
    871391 8rcm:D1 (3.59) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    871392 8rcm:D1 (3.59) BS02 rna ? GO:0000028 ... P0A7V8 38409277
    871393 8rcm:D2 (3.59) BS01 rna ? GO:0000028 ... P0A7V8 38409277
    871394 8rcm:E1 (3.59) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    871395 8rcm:E1 (3.59) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    871396 8rcm:E2 (3.59) BS01 rna ? GO:0000028 ... P0A7W1 38409277
    871397 8rcm:E2 (3.59) BS02 rna ? GO:0000028 ... P0A7W1 38409277
    871398 8rcm:F1 (3.59) BS01 rna ? GO:0002181 ... P02358 38409277
    871399 8rcm:F2 (3.59) BS01 rna ? GO:0002181 ... P02358 38409277
    871400 8rcm:G1 (3.59) BS01 rna ? GO:0000028 ... P02359 38409277

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).