SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    871801 8s91:E (4.3) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    871802 8s91:F (4.3) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    871803 8s93:A (2.1) BS01 9AJ 2.7.10.2 GO:0004672 ... P35991 38189455
    871804 8s93:A (2.1) BS02 ZN 2.7.10.2 GO:0004672 ... P35991 38189455
    871805 8s94:A (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    871806 8s94:A (3.94) BS02 MG 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    871807 8s94:B (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    871808 8s94:B (3.94) BS02 MG 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    871809 8s94:C (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    871810 8s94:C (3.94) BS02 MG 3.6.4.12 GO:0000724 ... Q9UJA3 37309874
    871811 8s94:D (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    871812 8s94:E (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    871813 8s94:F (3.94) BS01 ADP 3.6.4.12 GO:0000724 ... Q9NXL9 37309874
    871814 8s96:A (1.68) BS01 ZSF 4.6.1.18 GO:0003676 ... P61823 39071052
    871815 8s96:B (1.68) BS01 ZSF 4.6.1.18 GO:0003676 ... P61823 39071052
    871816 8s98:A (1.87) BS01 ZRU 2.7.10.2 GO:0004672 ... P29597 37427891
    871817 8s98:B (1.87) BS01 ZRU 2.7.10.2 GO:0004672 ... P29597 37427891
    871818 8s98:C (1.87) BS01 ZRU 2.7.10.2 GO:0004672 ... P29597 37427891
    871819 8s99:A (1.71) BS01 ZS3 2.7.10.2 GO:0004672 ... P29597 37427891
    871820 8s99:B (1.71) BS01 ZS3 2.7.10.2 GO:0004672 ... P29597 37427891
    871821 8s99:C (1.71) BS01 ZS3 2.7.10.2 GO:0004672 ... P29597 37427891
    871822 8s9a:A (1.83) BS01 ZSB 2.7.10.2 GO:0004672 ... P29597 37427891
    871823 8s9a:B (1.83) BS01 ZSB 2.7.10.2 GO:0004672 ... P29597 37427891
    871824 8s9a:C (1.83) BS01 ZSB 2.7.10.2 GO:0004672 ... P29597 37427891
    871825 8s9b:A (2.9) BS01 LQO ? GO:0001518 ... Q15858 37270609
    871826 8s9b:A (2.9) BS02 LQO ? GO:0001518 ... Q15858 37270609
    871827 8s9b:A (2.9) BS03 P5S ? GO:0001518 ... Q15858 37270609
    871828 8s9b:A (2.9) BS04 Y01 ? GO:0001518 ... Q15858 37270609
    871829 8s9b:A (2.9) BS05 Y01 ? GO:0001518 ... Q15858 37270609
    871830 8s9b:A (2.9) BS06 Y01 ? GO:0001518 ... Q15858 37270609
    871831 8s9b:A (2.9) BS07 LPE ? GO:0001518 ... Q15858 37270609
    871832 8s9b:A (2.9) BS08 LPE ? GO:0001518 ... Q15858 37270609
    871833 8s9b:A (2.9) BS09 P5S ? GO:0001518 ... Q15858 37270609
    871834 8s9b:A (2.9) BS10 LPE ? GO:0001518 ... Q15858 37270609
    871835 8s9b:A (2.9) BS11 LPE ? GO:0001518 ... Q15858 37270609
    871836 8s9b:A (2.9) BS12 LPE ? GO:0001518 ... Q15858 37270609
    871837 8s9b:A (2.9) BS13 LPE ? GO:0001518 ... Q15858 37270609
    871838 8s9b:A (2.9) BS14 Y01 ? GO:0001518 ... Q15858 37270609
    871839 8s9c:A (3.2) BS01 N6W ? GO:0001518 ... Q15858 37270609
    871840 8s9c:A (3.2) BS02 P5S ? GO:0001518 ... Q15858 37270609
    871841 8s9c:A (3.2) BS03 Y01 ? GO:0001518 ... Q15858 37270609
    871842 8s9c:A (3.2) BS04 Y01 ? GO:0001518 ... Q15858 37270609
    871843 8s9c:A (3.2) BS05 Y01 ? GO:0001518 ... Q15858 37270609
    871844 8s9c:A (3.2) BS06 LPE ? GO:0001518 ... Q15858 37270609
    871845 8s9c:A (3.2) BS07 LPE ? GO:0001518 ... Q15858 37270609
    871846 8s9c:A (3.2) BS08 P5S ? GO:0001518 ... Q15858 37270609
    871847 8s9c:A (3.2) BS09 LPE ? GO:0001518 ... Q15858 37270609
    871848 8s9c:A (3.2) BS10 LPE ? GO:0001518 ... Q15858 37270609
    871849 8s9c:A (3.2) BS11 LPE ? GO:0001518 ... Q15858 37270609
    871850 8s9c:A (3.2) BS12 LPE ? GO:0001518 ... Q15858 37270609
    871851 8s9c:A (3.2) BS13 LPE ? GO:0001518 ... Q15858 37270609
    871852 8s9c:A (3.2) BS14 LPE ? GO:0001518 ... Q15858 37270609
    871853 8s9c:A (3.2) BS15 P5S ? GO:0001518 ... Q15858 37270609
    871854 8s9c:A (3.2) BS16 Y01 ? GO:0001518 ... Q15858 37270609
    871855 8s9c:A (3.2) BS17 LPE ? GO:0001518 ... Q15858 37270609
    871856 8s9c:B (3.2) BS01 LPE ? GO:0001518 ... Q07699 37270609
    871857 8s9d:A (2.57) BS01 FLC 2.3.3.16 GO:0004108 ... P9WPD3 37252106
    871858 8s9f:A (2.6) BS01 1N1 2.7.10.2 GO:0004672 ... P35991 38189455
    871859 8s9f:B (2.6) BS01 1N1 2.7.10.2 GO:0004672 ... P35991 38189455
    871860 8s9h:A (2.437) BS01 ZWV ? GO:0002224 ... B3Y653 38352849
    871861 8s9h:A (2.437) BS02 ZWV ? GO:0002224 ... B3Y653 38352849
    871862 8s9h:B (2.437) BS01 ZWV ? GO:0002224 ... B3Y653 38352849
    871863 8s9h:B (2.437) BS02 ZWV ? GO:0002224 ... B3Y653 38352849
    871864 8s9i:A (3.53) BS01 peptide 3.6.4.12 GO:0004386 ... P32270 39417586
    871865 8s9i:A (3.53) BS02 dna 3.6.4.12 GO:0004386 ... P32270 39417586
    871866 8s9m:A (1.49) BS01 SFG N/A GO:0003677 ... N/A 37414145
    871867 8s9n:A (1.89) BS01 SFG N/A GO:0003677 ... N/A 37414145
    871868 8s9o:A (1.94) BS01 SFG N/A GO:0003677 ... N/A 37414145
    871869 8s9o:B (1.94) BS01 SFG N/A GO:0003677 ... N/A 37414145
    871870 8s9q:A (2.26) BS01 WBV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0003676 ... P12497 38328097
    871871 8s9r:A (2.6) BS01 ZN 3.1.1.3 N/A Q2G155 N/A
    871872 8s9r:A (2.6) BS02 CA 3.1.1.3 N/A Q2G155 N/A
    871873 8s9r:B (2.6) BS01 ZN 3.1.1.3 N/A Q2G155 N/A
    871874 8s9r:B (2.6) BS02 CA 3.1.1.3 N/A Q2G155 N/A
    871875 8s9t:A (2.52) BS01 rna ? GO:0051607 ... Q6ZED2 38637512
    871876 8s9t:B (2.52) BS01 rna ? N/A Q6ZED4 38637512
    871877 8s9t:D (2.52) BS01 rna ? GO:0051607 ... Q6ZED3 38637512
    871878 8s9t:E (2.52) BS01 rna ? GO:0051607 ... Q6ZED5 38637512
    871879 8s9u:A (2.77) BS01 rna ? GO:0051607 ... Q6ZED2 N/A
    871880 8s9u:A (2.77) BS02 rna ? GO:0051607 ... Q6ZED2 N/A
    871881 8s9u:B (2.77) BS01 rna ? N/A Q6ZED4 N/A
    871882 8s9u:C (2.77) BS01 rna ? GO:0051607 ... Q6ZED1 N/A
    871883 8s9u:D (2.77) BS01 rna ? GO:0051607 ... Q6ZED3 N/A
    871884 8s9u:D (2.77) BS02 rna ? GO:0051607 ... Q6ZED3 N/A
    871885 8s9u:E (2.77) BS01 rna ? GO:0051607 ... Q6ZED5 N/A
    871886 8s9u:E (2.77) BS02 rna ? GO:0051607 ... Q6ZED5 N/A
    871887 8s9v:A (3.0) BS01 rna ? GO:0051607 ... Q6ZED2 38637512
    871888 8s9v:A (3.0) BS02 rna ? GO:0051607 ... Q6ZED2 38637512
    871889 8s9v:B (3.0) BS01 rna ? N/A Q6ZED4 38637512
    871890 8s9v:B (3.0) BS02 rna ? N/A Q6ZED4 38637512
    871891 8s9v:C (3.0) BS01 rna ? GO:0051607 ... Q6ZED1 38637512
    871892 8s9v:D (3.0) BS01 rna ? GO:0051607 ... Q6ZED3 38637512
    871893 8s9v:D (3.0) BS02 rna ? GO:0051607 ... Q6ZED3 38637512
    871894 8s9v:D (3.0) BS03 MG ? GO:0051607 ... Q6ZED3 38637512
    871895 8s9v:E (3.0) BS01 rna ? GO:0051607 ... Q6ZED5 38637512
    871896 8s9v:E (3.0) BS02 rna ? GO:0051607 ... Q6ZED5 38637512
    871897 8s9w:A (1.69) BS01 CA ? GO:0005509 ... Q6S5I3 37769710
    871898 8s9w:A (1.69) BS02 CA ? GO:0005509 ... Q6S5I3 37769710
    871899 8s9w:B (1.69) BS01 CA ? GO:0005509 ... Q6S5I3 37769710
    871900 8s9w:B (1.69) BS02 CA ? GO:0005509 ... Q6S5I3 37769710
    871901 8s9x:A (3.44) BS01 rna ? GO:0051607 ... Q6ZED2 38637512
    871902 8s9x:A (3.44) BS02 rna ? GO:0051607 ... Q6ZED2 38637512
    871903 8s9x:B (3.44) BS01 rna ? N/A Q6ZED4 38637512
    871904 8s9x:D (3.44) BS01 rna ? GO:0051607 ... Q6ZED3 38637512
    871905 8s9x:D (3.44) BS02 rna ? GO:0051607 ... Q6ZED3 38637512
    871906 8s9x:E (3.44) BS01 rna ? GO:0051607 ... Q6ZED5 38637512
    871907 8s9x:E (3.44) BS02 rna ? GO:0051607 ... Q6ZED5 38637512
    871908 8s9z:A (1.6) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 N/A
    871909 8sa7:A (1.4) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871910 8sa7:B (1.4) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871911 8sa8:A (1.3) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871912 8sa8:A (1.3) BS02 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871913 8sa8:B (1.3) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871914 8sa8:B (1.3) BS02 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871915 8sa8:C (1.3) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871916 8sa8:C (1.3) BS02 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871917 8sa8:D (1.3) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871918 8sa8:D (1.3) BS02 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871919 8sa8:D (1.3) BS03 MG 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871920 8sa9:A (1.1) BS01 ZTS 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871921 8sa9:A (1.1) BS02 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871922 8sa9:B (1.1) BS01 ZTS 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871923 8sa9:B (1.1) BS02 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871924 8saa:A (1.45) BS01 MG 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871925 8saa:A (1.45) BS02 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871926 8saa:B (1.45) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871927 8sab:A (1.6) BS01 LYS 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871928 8sab:A (1.6) BS02 PP3 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871929 8sab:A (1.6) BS03 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871930 8sab:A (1.6) BS04 LYS 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871931 8sab:B (1.6) BS01 LYS 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871932 8sab:B (1.6) BS02 LYS 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871933 8sab:B (1.6) BS03 PP3 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871934 8sab:B (1.6) BS04 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871935 8sac:A (1.8) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871936 8sac:A (1.8) BS02 MG 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871937 8sac:A (1.8) BS03 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871938 8sac:B (1.8) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871939 8sac:B (1.8) BS02 MG 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871940 8sac:B (1.8) BS03 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871941 8sac:C (1.8) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871942 8sac:C (1.8) BS02 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871943 8sac:C (1.8) BS03 MG 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871944 8sac:D (1.8) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871945 8sac:D (1.8) BS02 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871946 8sac:D (1.8) BS03 MG 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871947 8sad:A (1.4) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871948 8sad:A (1.4) BS02 MG 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871949 8sad:B (1.4) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871950 8sad:B (1.4) BS02 MG 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871951 8sae:A (1.5) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871952 8sae:B (1.5) BS01 PLP 4.4.1.8 GO:0006520 ... A0A0H3FMF8 N/A
    871953 8saf:A (1.23) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    871954 8saf:A (1.23) BS02 ZUJ 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    871955 8sag:A (1.52) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    871956 8sag:A (1.52) BS02 ZUS 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A
    871957 8sai:A (3.27) BS01 S12 ? GO:0004930 ... Q9UPC5 37733739
    871958 8sak:A (3.0) BS01 FUC ? GO:0005515 ... A0A2R4KP93 37756379
    871959 8sam:A (2.15) BS01 ATP ? GO:0004672 ... A0A6H0TJ16
    A0A7U1BAR4
    37901177
    871960 8sam:B (2.15) BS01 ATP ? GO:0004672 ... A0A6H0TJ16
    A0A7U1BAR4
    37901177
    871961 8san:D (4.6) BS01 MAN N/A N/A N/A 37188681
    871962 8san:H (4.6) BS01 MAN N/A N/A N/A 37188681
    871963 8san:L (4.6) BS01 MAN N/A N/A N/A 37188681
    871964 8sao:B (2.502) BS01 peptide ? GO:0004672 ... A0A6H0TJ16 37901177
    871965 8sao:D (2.502) BS01 peptide ? GO:0004672 ... A0A6H0TJ16 37901177
    871966 8saq:C (3.9) BS01 MAN N/A N/A N/A 37188681
    871967 8saq:H (3.9) BS01 MAN N/A N/A N/A 37188681
    871968 8saq:M (3.9) BS01 MAN N/A N/A N/A 37188681
    871969 8sar:D (3.82) BS01 MAN N/A N/A N/A 37188681
    871970 8sar:D (3.82) BS02 MAN N/A N/A N/A 37188681
    871971 8sar:I (3.82) BS01 MAN N/A N/A N/A 37188681
    871972 8sar:I (3.82) BS02 MAN N/A N/A N/A 37188681
    871973 8sar:M (3.82) BS01 MAN N/A N/A N/A 37188681
    871974 8sar:N (3.82) BS01 MAN N/A N/A N/A 37188681
    871975 8sar:N (3.82) BS02 MAN N/A N/A N/A 37188681
    871976 8sas:D (4.0) BS01 MAN N/A N/A N/A 37188681
    871977 8sas:D (4.0) BS02 MAN N/A N/A N/A 37188681
    871978 8sas:I (4.0) BS01 MAN N/A N/A N/A 37188681
    871979 8sas:N (4.0) BS01 MAN N/A N/A N/A 37188681
    871980 8sau:C (3.3) BS01 MAN N/A N/A N/A 37188681
    871981 8sau:C (3.3) BS02 MAN N/A N/A N/A 37188681
    871982 8sau:D (3.3) BS01 MAN N/A N/A N/A 37188681
    871983 8sau:D (3.3) BS02 MAN N/A N/A N/A 37188681
    871984 8sau:D (3.3) BS03 MAN N/A N/A N/A 37188681
    871985 8sau:H (3.3) BS01 MAN N/A N/A N/A 37188681
    871986 8sau:H (3.3) BS02 MAN N/A N/A N/A 37188681
    871987 8sau:I (3.3) BS01 MAN N/A N/A N/A 37188681
    871988 8sau:I (3.3) BS02 MAN N/A N/A N/A 37188681
    871989 8sau:M (3.3) BS01 MAN N/A N/A N/A 37188681
    871990 8sau:M (3.3) BS02 MAN N/A N/A N/A 37188681
    871991 8sau:N (3.3) BS01 MAN N/A N/A N/A 37188681
    871992 8sau:N (3.3) BS02 MAN N/A N/A N/A 37188681
    871993 8sax:D (4.0) BS01 MAN N/A N/A N/A 37188681
    871994 8sax:H (4.0) BS01 MAN N/A N/A N/A 37188681
    871995 8sax:L (4.0) BS01 MAN N/A N/A N/A 37188681
    871996 8say:D (3.4) BS01 MAN N/A N/A N/A 37188681
    871997 8say:H (3.4) BS01 MAN N/A N/A N/A 37188681
    871998 8say:I (3.4) BS01 MAN N/A N/A N/A 37188681
    871999 8say:I (3.4) BS02 MAN N/A N/A N/A 37188681
    872000 8say:N (3.4) BS01 MAN N/A N/A N/A 37188681

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).