SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    872001 8saz:C (3.9) BS01 MAN N/A N/A N/A 37188681
    872002 8saz:C (3.9) BS02 MAN N/A N/A N/A 37188681
    872003 8saz:C (3.9) BS03 MAN N/A N/A N/A 37188681
    872004 8saz:D (3.9) BS01 MAN N/A N/A N/A 37188681
    872005 8saz:D (3.9) BS02 MAN N/A N/A N/A 37188681
    872006 8saz:H (3.9) BS01 MAN N/A N/A N/A 37188681
    872007 8saz:H (3.9) BS02 MAN N/A N/A N/A 37188681
    872008 8saz:I (3.9) BS01 MAN N/A N/A N/A 37188681
    872009 8saz:I (3.9) BS02 MAN N/A N/A N/A 37188681
    872010 8saz:M (3.9) BS01 MAN N/A N/A N/A 37188681
    872011 8saz:N (3.9) BS01 MAN N/A N/A N/A 37188681
    872012 8saz:N (3.9) BS02 MAN N/A N/A N/A 37188681
    872013 8sb0:C (4.2) BS01 MAN N/A N/A N/A 37188681
    872014 8sb0:C (4.2) BS02 MAN N/A N/A N/A 37188681
    872015 8sb0:D (4.2) BS01 MAN N/A N/A N/A 37188681
    872016 8sb0:D (4.2) BS02 MAN N/A N/A N/A 37188681
    872017 8sb0:H (4.2) BS01 MAN N/A N/A N/A 37188681
    872018 8sb0:H (4.2) BS02 MAN N/A N/A N/A 37188681
    872019 8sb0:H (4.2) BS03 MAN N/A N/A N/A 37188681
    872020 8sb0:I (4.2) BS01 MAN N/A N/A N/A 37188681
    872021 8sb0:M (4.2) BS01 MAN N/A N/A N/A 37188681
    872022 8sb0:M (4.2) BS02 MAN N/A N/A N/A 37188681
    872023 8sb0:N (4.2) BS01 MAN N/A N/A N/A 37188681
    872024 8sb1:D (4.3) BS01 MAN N/A N/A N/A 37188681
    872025 8sb1:D (4.3) BS02 MAN N/A N/A N/A 37188681
    872026 8sb1:D (4.3) BS03 MAN N/A N/A N/A 37188681
    872027 8sb1:I (4.3) BS01 MAN N/A N/A N/A 37188681
    872028 8sb1:I (4.3) BS02 MAN N/A N/A N/A 37188681
    872029 8sb1:I (4.3) BS03 MAN N/A N/A N/A 37188681
    872030 8sb1:N (4.3) BS01 MAN N/A N/A N/A 37188681
    872031 8sb1:N (4.3) BS02 MAN N/A N/A N/A 37188681
    872032 8sb1:N (4.3) BS03 MAN N/A N/A N/A 37188681
    872033 8sb2:D (3.5) BS01 MAN N/A N/A N/A 37188681
    872034 8sb2:D (3.5) BS02 MAN N/A N/A N/A 37188681
    872035 8sb2:I (3.5) BS01 MAN N/A N/A N/A 37188681
    872036 8sb2:I (3.5) BS02 MAN N/A N/A N/A 37188681
    872037 8sb2:N (3.5) BS01 MAN N/A N/A N/A 37188681
    872038 8sb2:N (3.5) BS02 MAN N/A N/A N/A 37188681
    872039 8sb3:C (4.1) BS01 BMA N/A N/A N/A 37188681
    872040 8sb3:C (4.1) BS02 MAN N/A N/A N/A 37188681
    872041 8sb3:D (4.1) BS01 MAN N/A N/A N/A 37188681
    872042 8sb3:H (4.1) BS01 BMA N/A N/A N/A 37188681
    872043 8sb3:H (4.1) BS02 MAN N/A N/A N/A 37188681
    872044 8sb3:I (4.1) BS01 MAN N/A N/A N/A 37188681
    872045 8sb3:M (4.1) BS01 BMA N/A N/A N/A 37188681
    872046 8sb3:M (4.1) BS02 MAN N/A N/A N/A 37188681
    872047 8sb3:M (4.1) BS03 MAN N/A N/A N/A 37188681
    872048 8sb3:N (4.1) BS01 MAN N/A N/A N/A 37188681
    872049 8sb4:C (3.6) BS01 MAN N/A N/A N/A 37188681
    872050 8sb4:D (3.6) BS01 MAN N/A N/A N/A 37188681
    872051 8sb4:D (3.6) BS02 MAN N/A N/A N/A 37188681
    872052 8sb4:I (3.6) BS01 MAN N/A N/A N/A 37188681
    872053 8sb4:M (3.6) BS01 MAN N/A N/A N/A 37188681
    872054 8sb4:N (3.6) BS01 MAN N/A N/A N/A 37188681
    872055 8sb4:N (3.6) BS02 MAN N/A N/A N/A 37188681
    872056 8sb5:D (3.9) BS01 MAN N/A N/A N/A 37188681
    872057 8sb5:D (3.9) BS02 MAN N/A N/A N/A 37188681
    872058 8sb5:I (3.9) BS01 MAN N/A N/A N/A 37188681
    872059 8sb5:I (3.9) BS02 MAN N/A N/A N/A 37188681
    872060 8sb5:I (3.9) BS03 MAN N/A N/A N/A 37188681
    872061 8sb5:I (3.9) BS04 MAN N/A N/A N/A 37188681
    872062 8sb5:M (3.9) BS01 MAN N/A N/A N/A 37188681
    872063 8sb5:N (3.9) BS01 MAN N/A N/A N/A 37188681
    872064 8sb5:N (3.9) BS02 MAN N/A N/A N/A 37188681
    872065 8sb5:N (3.9) BS03 MAN N/A N/A N/A 37188681
    872066 8sb6:A (1.8) BS01 peptide ? N/A P25440 37731000
    872067 8sb6:B (1.8) BS01 peptide ? N/A P25440 37731000
    872068 8sbb:A (3.59) BS01 FE ? GO:0004497 ... A0A1I2KHB9 37069165
    872069 8sbb:A (3.59) BS02 FE ? GO:0004497 ... A0A1I2KHB9 37069165
    872070 8sbc:A (2.3) BS01 ZTV 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37399505
    872071 8sbg:A (1.94) BS01 PLP 4.1.99.1 GO:0006520 ... A0A3E5GM45 37633277
    872072 8sbi:A (2.73) BS01 HEM 1.14.14.154 GO:0004497 ... Q16850 N/A
    872073 8sbi:B (2.73) BS01 HEM 1.14.14.154 GO:0004497 ... Q16850 N/A
    872074 8sbj:A (3.1) BS01 ZUO 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37399505
    872075 8sbk:A (1.8) BS01 peptide ? N/A A0A5H2UYS3 38039376
    872076 8sbl:A (3.0) BS01 peptide ? N/A A0A5H2UYS3 38039376
    872077 8sbl:D (3.0) BS01 peptide ? N/A A0A5H2UYS3 38039376
    872078 8sbl:G (3.0) BS01 peptide ? N/A A0A5H2UYS3 38039376
    872079 8sbl:J (3.0) BS01 peptide ? N/A A0A5H2UYS3 38039376
    872080 8sbm:A (1.47) BS01 ZN 2.7.13.3 N/A P9WGK3 37905955
    872081 8sbm:A (1.47) BS02 ZN 2.7.13.3 N/A P9WGK3 37905955
    872082 8sbm:B (1.47) BS01 ZN 2.7.13.3 N/A P9WGK3 37905955
    872083 8sbm:B (1.47) BS02 ZN 2.7.13.3 N/A P9WGK3 37905955
    872084 8sbq:A (1.5) BS01 ZUV 3.-.-.- GO:0016020 ... Q2FDS6 N/A
    872085 8sbq:A (1.5) BS02 ZUV 3.-.-.- GO:0016020 ... Q2FDS6 N/A
    872086 8sbq:B (1.5) BS01 ZUV 3.-.-.- GO:0016020 ... Q2FDS6 N/A
    872087 8sbq:B (1.5) BS02 ZUV 3.-.-.- GO:0016020 ... Q2FDS6 N/A
    872088 8sbr:A (2.59) BS01 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    872089 8sbr:A (2.59) BS02 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    872090 8sbr:B (2.59) BS01 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    872091 8sbr:B (2.59) BS02 CTP 6.3.4.2 GO:0000287 ... P0A7E5 37106216
    872092 8sbt:A (1.5) BS01 MG N/A N/A N/A 39473058
    872093 8sbt:A (1.5) BS02 ZUY N/A N/A N/A 39473058
    872094 8sbu:A (2.2) BS01 GLC N/A GO:0000287 ... P0AEX9
    Q59028
    N/A
    872095 8sbu:A (2.2) BS02 GLC N/A GO:0000287 ... P0AEX9
    Q59028
    N/A
    872096 8sbu:B (2.2) BS01 GLC N/A GO:0000287 ... P0AEX9
    Q59028
    N/A
    872097 8sbu:B (2.2) BS02 GLC N/A GO:0000287 ... P0AEX9
    Q59028
    N/A
    872098 8sbv:B (1.55) BS01 ADP 1.3.1.28 GO:0000166 ... A0A0H3FXS4 N/A
    872099 8sby:A (2.3) BS01 NAD 1.3.1.28 GO:0000166 ... A0A0H3FXS4 N/A
    872100 8sby:B (2.3) BS01 NAD 1.3.1.28 GO:0000166 ... A0A0H3FXS4 N/A
    872101 8sbz:A (1.9) BS01 NAD 1.3.1.28 GO:0000166 ... A0A0H3FXS4 N/A
    872102 8sbz:B (1.9) BS01 NAD 1.3.1.28 GO:0000166 ... A0A0H3FXS4 N/A
    872103 8sc0:C (1.81) BS01 NAD 1.3.1.28 GO:0000166 ... A0A0H3FXS4 N/A
    872104 8sc0:D (1.81) BS01 NAD 1.3.1.28 GO:0000166 ... A0A0H3FXS4 N/A
    872105 8sc2:A (3.36) BS01 C9F ? GO:0005277 ... O15245 37821493
    872106 8sc3:A (3.24) BS01 ZVJ ? GO:0005277 ... O15245 37821493
    872107 8sc6:A (3.13) BS01 VIB ? GO:0005277 ... O15245 37821493
    872108 8sc7:A (1.984) BS01 D0D 2.7.10.1 GO:0004672 ... P00533 38992135
    872109 8sc8:A (2.687) BS01 D0D 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154
    GO:0016301 ... P48736 38992135
    872110 8sc9:B (1.855) BS01 D0D ? GO:0003677 ... P37231 38992135
    872111 8scb:A (2.5) BS01 rna ? GO:0002181 ... G1TT27 38172604
    872112 8scb:A (2.5) BS02 MG ? GO:0002181 ... G1TT27 38172604
    872113 8scb:A (2.5) BS03 MG ? GO:0002181 ... G1TT27 38172604
    872114 8scb:AA (2.5) BS01 rna ? GO:0000028 ... G1TLT8 38172604
    872115 8scb:B (2.5) BS01 rna ? GO:0003723 ... G1TL06 38172604
    872116 8scb:B (2.5) BS02 MG ? GO:0003723 ... G1TL06 38172604
    872117 8scb:BB (2.5) BS01 rna ? GO:0003735 ... G1SS70 38172604
    872118 8scb:C (2.5) BS01 rna ? GO:0003735 ... G1SVW5 38172604
    872119 8scb:C (2.5) BS02 rna ? GO:0003735 ... G1SVW5 38172604
    872120 8scb:CC (2.5) BS01 rna N/A GO:0003723 ... N/A 38172604
    872121 8scb:D (2.5) BS01 rna ? GO:0000027 ... P19949 38172604
    872122 8scb:D (2.5) BS02 rna ? GO:0000027 ... P19949 38172604
    872123 8scb:DD (2.5) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 38172604
    872124 8scb:E (2.5) BS01 rna ? GO:0000027 ... G1SKF7 38172604
    872125 8scb:EE (2.5) BS01 rna ? GO:0003723 ... G1TK17 38172604
    872126 8scb:EE (2.5) BS02 MG ? GO:0003723 ... G1TK17 38172604
    872127 8scb:F (2.5) BS01 rna ? GO:0000463 ... G1TUB1 38172604
    872128 8scb:F (2.5) BS02 rna ? GO:0000463 ... G1TUB1 38172604
    872129 8scb:FF (2.5) BS01 rna ? GO:0003723 ... G1TFM5 38172604
    872130 8scb:FF (2.5) BS02 rna ? GO:0003723 ... G1TFM5 38172604
    872131 8scb:G (2.5) BS01 rna ? GO:0003723 ... G1STW0 38172604
    872132 8scb:G (2.5) BS02 rna ? GO:0003723 ... G1STW0 38172604
    872133 8scb:GG (2.5) BS01 rna ? GO:0003735 ... G1TM55 38172604
    872134 8scb:H (2.5) BS01 rna ? GO:0002181 ... G1SWI6 38172604
    872135 8scb:HH (2.5) BS01 rna ? GO:0003735 ... G1SVB0 38172604
    872136 8scb:I (2.5) BS01 rna ? GO:0003735 ... B7NZQ2 38172604
    872137 8scb:I (2.5) BS02 rna ? GO:0003735 ... B7NZQ2 38172604
    872138 8scb:I (2.5) BS03 MG ? GO:0003735 ... B7NZQ2 38172604
    872139 8scb:II (2.5) BS01 rna ? GO:0003735 ... G1TJW1 38172604
    872140 8scb:II (2.5) BS02 rna ? GO:0003735 ... G1TJW1 38172604
    872141 8scb:J (2.5) BS01 rna ? GO:0003735 ... G1TUB8 38172604
    872142 8scb:J (2.5) BS02 rna ? GO:0003735 ... G1TUB8 38172604
    872143 8scb:J (2.5) BS03 rna ? GO:0003735 ... G1TUB8 38172604
    872144 8scb:JJ (2.5) BS01 rna ? GO:0003723 ... B7NZS8 38172604
    872145 8scb:KK (2.5) BS01 rna ? GO:0003723 ... G1TPV3 38172604
    872146 8scb:L (2.5) BS01 rna N/A GO:0003735 ... N/A 38172604
    872147 8scb:L (2.5) BS02 rna N/A GO:0003735 ... N/A 38172604
    872148 8scb:LL (2.5) BS01 rna ? GO:0003735 ... G1TRM4 38172604
    872149 8scb:LL (2.5) BS02 MG ? GO:0003735 ... G1TRM4 38172604
    872150 8scb:M (2.5) BS01 rna ? GO:0003723 ... G1SZ12 38172604
    872151 8scb:MM (2.5) BS01 rna ? GO:0003735 ... G1SFR8 38172604
    872152 8scb:N (2.5) BS01 rna ? GO:0002181 ... G1T0C1 38172604
    872153 8scb:N (2.5) BS02 rna ? GO:0002181 ... G1T0C1 38172604
    872154 8scb:NN (2.5) BS01 rna ? GO:0003735 ... G1SP51 38172604
    872155 8scb:O (2.5) BS01 rna N/A GO:0003735 ... N/A 38172604
    872156 8scb:OO (2.5) BS01 rna ? GO:0003735 ... G1T1F0 38172604
    872157 8scb:OO (2.5) BS02 MG ? GO:0003735 ... G1T1F0 38172604
    872158 8scb:P (2.5) BS01 peptide ? GO:0002181 ... G1SCJ6 38172604
    872159 8scb:P (2.5) BS02 rna ? GO:0002181 ... G1SCJ6 38172604
    872160 8scb:P (2.5) BS03 rna ? GO:0002181 ... G1SCJ6 38172604
    872161 8scb:PP (2.5) BS01 rna ? GO:0000028 ... G1U0Q2 38172604
    872162 8scb:Q (2.5) BS01 rna ? GO:0003723 ... G1TFE0 38172604
    872163 8scb:QQ (2.5) BS01 rna ? GO:0000462 ... G1SGX4 38172604
    872164 8scb:R (2.5) BS01 rna ? GO:0003723 ... G1TJR3 38172604
    872165 8scb:R (2.5) BS02 rna ? GO:0003723 ... G1TJR3 38172604
    872166 8scb:RR (2.5) BS01 rna ? GO:0003735 ... G1TU13 38172604
    872167 8scb:S (2.5) BS01 rna N/A GO:0003735 ... N/A 38172604
    872168 8scb:S (2.5) BS02 rna N/A GO:0003735 ... N/A 38172604
    872169 8scb:SS (2.5) BS01 rna ? GO:0003676 ... G1TPG3 38172604
    872170 8scb:T (2.5) BS01 rna ? GO:0003735 ... G1SHQ2 38172604
    872171 8scb:T (2.5) BS02 rna ? GO:0003735 ... G1SHQ2 38172604
    872172 8scb:TT (2.5) BS01 rna ? GO:0000028 ... G1TN62 38172604
    872173 8scb:U (2.5) BS01 rna ? GO:0002181 ... G1TSG1 38172604
    872174 8scb:UU (2.5) BS01 rna ? GO:0003723 ... G1SIZ2 38172604
    872175 8scb:V (2.5) BS01 rna ? GO:0003735 ... G1T6D1 38172604
    872176 8scb:V (2.5) BS02 MG ? GO:0003735 ... G1T6D1 38172604
    872177 8scb:W (2.5) BS01 rna ? GO:0000027 ... G1SE28 38172604
    872178 8scb:WW (2.5) BS01 rna ? GO:0003735 ... G1TG89 38172604
    872179 8scb:X (2.5) BS01 rna ? GO:0003735 ... G1SE76 38172604
    872180 8scb:X (2.5) BS02 rna ? GO:0003735 ... G1SE76 38172604
    872181 8scb:XX (2.5) BS01 rna ? GO:0003735 ... G1SZ47 38172604
    872182 8scb:Y (2.5) BS01 rna ? GO:0003723 ... G1SQH0 38172604
    872183 8scb:Y (2.5) BS02 rna ? GO:0003723 ... G1SQH0 38172604
    872184 8scb:YY (2.5) BS01 rna ? GO:0003735 ... G1T3D8 38172604
    872185 8scb:Z (2.5) BS01 rna ? GO:0003735 ... G1TXF6 38172604
    872186 8scb:ZZ (2.5) BS01 rna ? GO:0003735 ... G1TDB3 38172604
    872187 8scb:a (2.5) BS01 rna ? GO:0003735 ... G1SNY0 38172604
    872188 8scb:aa (2.5) BS01 rna ? GO:0003729 ... G1TFE8 38172604
    872189 8scb:aa (2.5) BS02 ZN ? GO:0003729 ... G1TFE8 38172604
    872190 8scb:b (2.5) BS01 rna ? GO:0002181 ... G1SGR6 38172604
    872191 8scb:bb (2.5) BS01 rna ? GO:0003735 ... G1TZ76 38172604
    872192 8scb:c (2.5) BS01 rna ? GO:0002181 ... G1TDL2 38172604
    872193 8scb:cc (2.5) BS01 rna ? GO:0000028 ... G1TIB4 38172604
    872194 8scb:d (2.5) BS01 rna ? GO:0002181 ... G1SHG0 38172604
    872195 8scb:dd (2.5) BS01 rna ? GO:0002181 ... G1U7M4 38172604
    872196 8scb:dd (2.5) BS02 ZN ? GO:0002181 ... G1U7M4 38172604
    872197 8scb:e (2.5) BS01 rna ? GO:0003735 ... G1TUN8 38172604
    872198 8scb:e (2.5) BS02 MG ? GO:0003735 ... G1TUN8 38172604
    872199 8scb:ee (2.5) BS01 rna ? GO:0003735 ... G1T8A2 38172604
    872200 8scb:f (2.5) BS01 rna ? GO:0000049 ... G1SF08 38172604

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).