SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    872201 8rev:A (3.1) BS04 ADP 3.6.4.12 GO:0000112 ... G0RZH0 38806694
    872202 8rey:A (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872203 8rey:B (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872204 8rey:C (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872205 8rey:D (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872206 8rey:E (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872207 8rey:F (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872208 8rey:G (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872209 8rey:H (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872210 8rey:I (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872211 8rey:J (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872212 8rey:K (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872213 8rey:L (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872214 8rey:M (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872215 8rey:N (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872216 8rey:O (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872217 8rey:P (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872218 8rey:Q (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872219 8rey:R (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872220 8rey:S (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872221 8rey:T (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872222 8rey:U (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872223 8rey:V (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872224 8rey:W (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872225 8rey:X (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872226 8rey:Y (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872227 8rey:Z (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872228 8rey:a (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872229 8rey:b (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872230 8rey:c (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872231 8rey:d (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872232 8rey:e (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872233 8rey:f (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872234 8rey:g (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872235 8rey:h (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872236 8rey:i (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872237 8rey:j (2.61) BS01 GAL N/A N/A A0A1N5V6R6 40801261
    872238 8rf0:A (3.4) BS01 BGC N/A GO:0005975 ... N/A 38418509
    872239 8rf0:A (3.4) BS02 BGC N/A GO:0005975 ... N/A 38418509
    872240 8rf0:A (3.4) BS03 BGC N/A GO:0005975 ... N/A 38418509
    872241 8rf0:A (3.4) BS04 BGC N/A GO:0005975 ... N/A 38418509
    872242 8rf0:A (3.4) BS05 UPG N/A GO:0005975 ... N/A 38418509
    872243 8rf1:A (4.3) BS01 RHQ N/A GO:0005524 ... O06967 39966360
    872244 8rf1:B (4.3) BS01 RHQ N/A GO:0005524 ... O06967 39966360
    872245 8rf1:B (4.3) BS02 RHQ N/A GO:0005524 ... O06967 39966360
    872246 8rf2:A (1.44) BS01 A1H0G N/A N/A P0DTD1 38841886
    872247 8rf3:A (1.23) BS01 A1H0L N/A N/A P0DTD1 38841886
    872248 8rf4:A (1.11) BS01 EQT N/A N/A P0DTD1 38841886
    872249 8rf5:A (1.1) BS01 FBB N/A N/A P0DTD1 38841886
    872250 8rf6:A (1.08) BS01 A1H0K N/A N/A P0DTD1 38841886
    872251 8rf8:A (1.12) BS01 A1H0M N/A N/A P0DTD1 38841886
    872252 8rfa:A (1.76) BS01 MN N/A GO:0000050 ... P78540 39572889
    872253 8rfa:A (1.76) BS02 MN N/A GO:0000050 ... P78540 39572889
    872254 8rfa:A (1.76) BS03 A1HZ9 N/A GO:0000050 ... P78540 39572889
    872255 8rfa:B (1.76) BS01 MN N/A GO:0000050 ... P78540 39572889
    872256 8rfa:B (1.76) BS02 MN N/A GO:0000050 ... P78540 39572889
    872257 8rfa:C (1.76) BS01 MN N/A GO:0000050 ... P78540 39572889
    872258 8rfa:C (1.76) BS02 MN N/A GO:0000050 ... P78540 39572889
    872259 8rfc:A (1.1) BS01 A1H0N N/A N/A P0DTD1 38841886
    872260 8rfd:A (1.13) BS01 A1H0J N/A N/A P0DTD1 38841886
    872261 8rfe:A (3.8) BS01 BGC N/A GO:0005975 ... N/A 38418509
    872262 8rfe:A (3.8) BS02 BGC N/A GO:0005975 ... N/A 38418509
    872263 8rfe:A (3.8) BS03 BGC N/A GO:0005975 ... N/A 38418509
    872264 8rfe:A (3.8) BS04 BGC N/A GO:0005975 ... N/A 38418509
    872265 8rfe:A (3.8) BS05 UPG N/A GO:0005975 ... N/A 38418509
    872266 8rfe:A (3.8) BS06 UPG N/A GO:0005975 ... N/A 38418509
    872267 8rff:A (1.31) BS01 ABV N/A N/A P0DTD1 38841886
    872268 8rfg:A (3.35) BS01 BGC N/A GO:0005975 ... N/A 38418509
    872269 8rfg:A (3.35) BS02 BGC N/A GO:0005975 ... N/A 38418509
    872270 8rfg:A (3.35) BS03 BGC N/A GO:0005975 ... N/A 38418509
    872271 8rfg:A (3.35) BS04 BGC N/A GO:0005975 ... N/A 38418509
    872272 8rfg:A (3.35) BS05 BGC N/A GO:0005975 ... N/A 38418509
    872273 8rfg:A (3.35) BS06 BGC N/A GO:0005975 ... N/A 38418509
    872274 8rfg:A (3.35) BS07 BGC N/A GO:0005975 ... N/A 38418509
    872275 8rfg:A (3.35) BS08 BGC N/A GO:0005975 ... N/A 38418509
    872276 8rfg:A (3.35) BS09 BGC N/A GO:0005975 ... N/A 38418509
    872277 8rfg:A (3.35) BS10 BGC N/A GO:0005975 ... N/A 38418509
    872278 8rfh:A (3.9) BS01 ADP ? GO:0006952 ... A0A0S3ANR1 39423240
    872279 8rfh:B (3.9) BS01 ADP ? GO:0006952 ... A0A0S3ANR1 39423240
    872280 8rfj:A (3.18) BS01 rna N/A N/A A0A379PIR9 39468082
    872281 8rfj:A (3.18) BS02 dna N/A N/A A0A379PIR9 39468082
    872282 8rfj:A (3.18) BS03 dna N/A N/A A0A379PIR9 39468082
    872283 8rfj:B (3.18) BS01 rna N/A N/A A0A379PIR9 39468082
    872284 8rfj:B (3.18) BS02 dna N/A N/A A0A379PIR9 39468082
    872285 8rfj:C (3.18) BS01 rna N/A N/A A0A379PIR9 39468082
    872286 8rfj:C (3.18) BS02 dna N/A N/A A0A379PIR9 39468082
    872287 8rfj:D (3.18) BS01 rna N/A N/A A0A379PIR9 39468082
    872288 8rfj:D (3.18) BS02 dna N/A N/A A0A379PIR9 39468082
    872289 8rfj:E (3.18) BS01 rna N/A N/A A0A379PIR9 39468082
    872290 8rfj:E (3.18) BS02 dna N/A N/A A0A379PIR9 39468082
    872291 8rfj:F (3.18) BS01 rna N/A N/A A0A379PL53 39468082
    872292 8rfj:F (3.18) BS02 dna N/A N/A A0A379PL53 39468082
    872293 8rfj:F (3.18) BS03 dna N/A N/A A0A379PL53 39468082
    872294 8rfj:G (3.18) BS01 dna N/A N/A A0A379PIR4 39468082
    872295 8rfj:G (3.18) BS02 dna N/A N/A A0A379PIR4 39468082
    872296 8rfj:G (3.18) BS03 ZN N/A N/A A0A379PIR4 39468082
    872297 8rfj:K (3.18) BS01 dna N/A GO:0003676 ... A0A379PL92 39468082
    872298 8rfj:M (3.18) BS01 rna N/A N/A A0A379PNK2 39468082
    872299 8rfj:M (3.18) BS02 dna N/A N/A A0A379PNK2 39468082
    872300 8rfk:A (1.56) BS01 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872301 8rfk:A (1.56) BS02 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872302 8rfk:A (1.56) BS03 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872303 8rfk:A (1.56) BS04 A1H0D 1.1.5.2 GO:0008876 ... P13650 38687614
    872304 8rfk:B (1.56) BS01 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872305 8rfk:B (1.56) BS02 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872306 8rfk:B (1.56) BS03 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872307 8rfk:B (1.56) BS04 A1H0D 1.1.5.2 GO:0008876 ... P13650 38687614
    872308 8rfl:A (1.16) BS01 FRU N/A GO:0005507 ... Q89EJ6 39002715
    872309 8rfl:A (1.16) BS02 CU N/A GO:0005507 ... Q89EJ6 39002715
    872310 8rfl:A (1.16) BS03 CU N/A GO:0005507 ... Q89EJ6 39002715
    872311 8rfl:A (1.16) BS04 NO2 N/A GO:0005507 ... Q89EJ6 39002715
    872312 8rfl:A (1.16) BS05 NO2 N/A GO:0005507 ... Q89EJ6 39002715
    872313 8rfm:A (2.7) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872314 8rfm:A (2.7) BS02 NAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872315 8rfm:B (2.7) BS01 NAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872316 8rfm:B (2.7) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872317 8rfm:C (2.7) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872318 8rfm:C (2.7) BS02 NAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872319 8rfm:C (2.7) BS03 FAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872320 8rfm:D (2.7) BS01 NAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872321 8rfm:D (2.7) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872322 8rfn:A (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872323 8rfn:B (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872324 8rfn:C (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872325 8rfn:C (2.5) BS02 FAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872326 8rfn:D (2.5) BS01 FAD 1.6.5.2 GO:0000209 ... P15559 38501509
    872327 8rfo:A (1.19) BS01 FRU N/A GO:0005507 ... Q89EJ6 39002715
    872328 8rfo:A (1.19) BS02 CU N/A GO:0005507 ... Q89EJ6 39002715
    872329 8rfo:A (1.19) BS03 CU N/A GO:0005507 ... Q89EJ6 39002715
    872330 8rfo:A (1.19) BS04 NO2 N/A GO:0005507 ... Q89EJ6 39002715
    872331 8rfo:A (1.19) BS05 NO2 N/A GO:0005507 ... Q89EJ6 39002715
    872332 8rfp:A (1.23) BS01 FRU N/A GO:0005507 ... Q89EJ6 39002715
    872333 8rfp:A (1.23) BS02 CU N/A GO:0005507 ... Q89EJ6 39002715
    872334 8rfp:A (1.23) BS03 CU N/A GO:0005507 ... Q89EJ6 39002715
    872335 8rfp:A (1.23) BS04 NO2 N/A GO:0005507 ... Q89EJ6 39002715
    872336 8rfp:A (1.23) BS05 NO2 N/A GO:0005507 ... Q89EJ6 39002715
    872337 8rfp:A (1.23) BS06 NO N/A GO:0005507 ... Q89EJ6 39002715
    872338 8rfq:A (1.32) BS01 FRU N/A GO:0005507 ... Q89EJ6 39002715
    872339 8rfq:A (1.32) BS02 CU N/A GO:0005507 ... Q89EJ6 39002715
    872340 8rfq:A (1.32) BS03 CU N/A GO:0005507 ... Q89EJ6 39002715
    872341 8rfq:A (1.32) BS04 NO2 N/A GO:0005507 ... Q89EJ6 39002715
    872342 8rfq:A (1.32) BS05 NO N/A GO:0005507 ... Q89EJ6 39002715
    872343 8rfr:A (1.4) BS01 FRU N/A GO:0005507 ... Q89EJ6 39002715
    872344 8rfr:A (1.4) BS02 CU N/A GO:0005507 ... Q89EJ6 39002715
    872345 8rfr:A (1.4) BS03 CU N/A GO:0005507 ... Q89EJ6 39002715
    872346 8rfr:A (1.4) BS04 NO2 N/A GO:0005507 ... Q89EJ6 39002715
    872347 8rfr:A (1.4) BS05 NO N/A GO:0005507 ... Q89EJ6 39002715
    872348 8rfs:A (1.54) BS01 FRU N/A GO:0005507 ... Q89EJ6 39002715
    872349 8rfs:A (1.54) BS02 CU N/A GO:0005507 ... Q89EJ6 39002715
    872350 8rfs:A (1.54) BS03 CU N/A GO:0005507 ... Q89EJ6 39002715
    872351 8rft:A (1.7) BS01 FRU N/A GO:0005507 ... Q89EJ6 39002715
    872352 8rft:A (1.7) BS02 CU N/A GO:0005507 ... Q89EJ6 39002715
    872353 8rft:A (1.7) BS03 CU N/A GO:0005507 ... Q89EJ6 39002715
    872354 8rfu:A (2.18) BS01 FRU N/A GO:0005507 ... Q89EJ6 39002715
    872355 8rfu:A (2.18) BS02 CU N/A GO:0005507 ... Q89EJ6 39002715
    872356 8rfu:A (2.18) BS03 CU N/A GO:0005507 ... Q89EJ6 39002715
    872357 8rfu:A (2.18) BS04 NO2 N/A GO:0005507 ... Q89EJ6 39002715
    872358 8rfv:A (1.31) BS01 CU N/A GO:0005507 ... A0ACD6B9I5 39002715
    872359 8rfv:A (1.31) BS02 CU N/A GO:0005507 ... A0ACD6B9I5 39002715
    872360 8rfw:A (1.33) BS01 CU N/A GO:0005507 ... A0ACD6B9I5 39002715
    872361 8rfw:A (1.33) BS02 CU N/A GO:0005507 ... A0ACD6B9I5 39002715
    872362 8rfx:A (1.4) BS01 CU N/A GO:0005507 ... A0ACD6B9I5 39002715
    872363 8rfx:A (1.4) BS02 CU N/A GO:0005507 ... A0ACD6B9I5 39002715
    872364 8rfy:A (1.79) BS01 CU N/A GO:0005507 ... A0ACD6B9I5 39002715
    872365 8rfy:A (1.79) BS02 CU N/A GO:0005507 ... A0ACD6B9I5 39002715
    872366 8rg0:8 (3.4) BS01 rna N/A GO:0001732 ... O15372 39289545
    872367 8rg0:H (3.4) BS01 rna N/A GO:0002181 ... P42677 39289545
    872368 8rg0:I (3.4) BS01 rna N/A GO:0000462 ... P62277 39289545
    872369 8rg0:M (3.4) BS01 rna N/A GO:0002181 ... P08708 39289545
    872370 8rg0:N (3.4) BS01 rna N/A GO:0000028 ... P08865 39289545
    872371 8rg0:O (3.4) BS01 rna N/A GO:0002181 ... P61247 39289545
    872372 8rg0:P (3.4) BS01 rna N/A GO:0000028 ... P62263 39289545
    872373 8rg0:Q (3.4) BS01 rna N/A GO:0002181 ... P62854 39289545
    872374 8rg0:Q (3.4) BS02 rna N/A GO:0002181 ... P62854 39289545
    872375 8rg0:Q (3.4) BS03 ZN N/A GO:0002181 ... P62854 39289545
    872376 8rg0:n (3.4) BS01 rna N/A GO:0000028 ... P62857 39289545
    872377 8rg0:u (3.4) BS01 rna N/A GO:0001732 ... Q14152 39289545
    872378 8rg0:x (3.4) BS01 rna N/A GO:0001732 ... O15371 39289545
    872379 8rg0:y (3.4) BS01 rna N/A GO:0001732 ... Q99613 39289545
    872380 8rg0:y (3.4) BS02 rna N/A GO:0001732 ... Q99613 39289545
    872381 8rg1:A (1.19) BS01 A1H0D 1.1.5.2 GO:0008876 ... P13650 38687614
    872382 8rg1:A (1.19) BS02 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872383 8rg1:A (1.19) BS03 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872384 8rg1:A (1.19) BS04 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872385 8rg1:B (1.19) BS01 A1H0D 1.1.5.2 GO:0008876 ... P13650 38687614
    872386 8rg1:B (1.19) BS02 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872387 8rg1:B (1.19) BS03 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872388 8rg1:B (1.19) BS04 CA 1.1.5.2 GO:0008876 ... P13650 38687614
    872389 8rg6:A (1.62) BS01 MN N/A GO:0000050 ... P78540 39572889
    872390 8rg6:A (1.62) BS02 MN N/A GO:0000050 ... P78540 39572889
    872391 8rg6:A (1.62) BS03 A1H0B N/A GO:0000050 ... P78540 39572889
    872392 8rg6:B (1.62) BS01 MN N/A GO:0000050 ... P78540 39572889
    872393 8rg6:B (1.62) BS02 MN N/A GO:0000050 ... P78540 39572889
    872394 8rg6:B (1.62) BS03 A1H0B N/A GO:0000050 ... P78540 39572889
    872395 8rg6:C (1.62) BS01 MN N/A GO:0000050 ... P78540 39572889
    872396 8rg6:C (1.62) BS02 MN N/A GO:0000050 ... P78540 39572889
    872397 8rg6:C (1.62) BS03 A1H0B N/A GO:0000050 ... P78540 39572889
    872398 8rg7:A (3.9) BS01 RHQ N/A GO:0005524 ... O06967 39966360
    872399 8rg7:A (3.9) BS02 RHQ N/A GO:0005524 ... O06967 39966360
    872400 8rg7:B (3.9) BS01 RHQ N/A GO:0005524 ... O06967 39966360

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).