SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    872801 8sf7:QK (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872802 8sf7:QL (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872803 8sf7:QM (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872804 8sf7:QN (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872805 8sf7:RA (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872806 8sf7:RB (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872807 8sf7:RC (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872808 8sf7:RD (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872809 8sf7:RE (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872810 8sf7:RF (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872811 8sf7:RG (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872812 8sf7:RH (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872813 8sf7:RI (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872814 8sf7:RJ (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872815 8sf7:RK (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872816 8sf7:RL (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872817 8sf7:RL (4.1) BS02 GTP ? GO:0003924 ... P41352 38598282
    872818 8sf7:RM (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872819 8sf7:RN (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872820 8sf7:SA (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872821 8sf7:SB (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872822 8sf7:SB (4.1) BS02 GTP ? GO:0003924 ... P41352 38598282
    872823 8sf7:SC (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872824 8sf7:SD (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872825 8sf7:SE (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872826 8sf7:SF (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872827 8sf7:SG (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872828 8sf7:SH (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872829 8sf7:SI (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872830 8sf7:SJ (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872831 8sf7:SK (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872832 8sf7:SL (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872833 8sf7:SL (4.1) BS02 GTP ? GO:0003924 ... P41352 38598282
    872834 8sf7:SM (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872835 8sf7:SN (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872836 8sf7:TA (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872837 8sf7:TB (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872838 8sf7:TC (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872839 8sf7:TD (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872840 8sf7:TE (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872841 8sf7:TF (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872842 8sf7:TG (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872843 8sf7:TH (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872844 8sf7:TI (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872845 8sf7:TJ (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872846 8sf7:TK (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872847 8sf7:TL (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872848 8sf7:TM (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872849 8sf7:TN (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872850 8sf7:UA (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872851 8sf7:UB (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872852 8sf7:UC (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872853 8sf7:UD (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872854 8sf7:UE (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872855 8sf7:UF (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872856 8sf7:UG (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872857 8sf7:UH (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872858 8sf7:UI (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872859 8sf7:UJ (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872860 8sf7:UJ (4.1) BS02 GTP ? GO:0003924 ... P41352 38598282
    872861 8sf7:UK (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872862 8sf7:UL (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872863 8sf7:UL (4.1) BS02 GTP ? GO:0003924 ... P41352 38598282
    872864 8sf7:UM (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872865 8sf7:UN (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872866 8sf7:VA (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872867 8sf7:VB (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872868 8sf7:VC (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872869 8sf7:VD (4.1) BS01 GTP ? GO:0003924 ... P41352 38598282
    872870 8sf7:VD (4.1) BS02 GDP ? GO:0003924 ... P41352 38598282
    872871 8sf7:VE (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872872 8sf7:VF (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872873 8sf7:VG (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872874 8sf7:VH (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872875 8sf7:VI (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872876 8sf7:VJ (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872877 8sf7:VK (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872878 8sf7:VK (4.1) BS02 MG 3.6.5.- GO:0005200 ... P41351 38598282
    872879 8sf7:VL (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872880 8sf7:VM (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872881 8sf7:VM (4.1) BS02 MG 3.6.5.- GO:0005200 ... P41351 38598282
    872882 8sf7:VN (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872883 8sf7:WA (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872884 8sf7:WB (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872885 8sf7:WC (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872886 8sf7:WC (4.1) BS02 MG 3.6.5.- GO:0005200 ... P41351 38598282
    872887 8sf7:WD (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872888 8sf7:WE (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872889 8sf7:WF (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872890 8sf7:WG (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872891 8sf7:WH (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872892 8sf7:WI (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872893 8sf7:WJ (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872894 8sf7:WK (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872895 8sf7:WL (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872896 8sf7:WM (4.1) BS01 GTP 3.6.5.- GO:0005200 ... P41351 38598282
    872897 8sf7:WN (4.1) BS01 GDP ? GO:0003924 ... P41352 38598282
    872898 8sf8:A (1.7) BS01 peptide 2.7.11.11 GO:0000287 ... P00517 38330278
    872899 8sf8:A (1.7) BS02 ZWG 2.7.11.11 GO:0000287 ... P00517 38330278
    872900 8sf9:D (1.8) BS01 FE 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872901 8sf9:D (1.8) BS02 CO 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872902 8sfa:D (2.32) BS01 FE 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872903 8sfa:D (2.32) BS02 CO 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872904 8sfa:S (2.32) BS01 FE 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872905 8sfa:S (2.32) BS02 CO 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872906 8sfa:b (2.32) BS01 FE 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872907 8sfa:b (2.32) BS02 CO 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872908 8sfa:t (2.32) BS01 FE 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872909 8sfa:t (2.32) BS02 CO 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872910 8sfb:D (1.4) BS01 FE 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872911 8sfb:D (1.4) BS02 CO 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872912 8sfc:D (1.4) BS01 FE 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872913 8sfc:D (1.4) BS02 CO 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872914 8sfd:D (1.5) BS01 FE 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872915 8sfd:D (1.5) BS02 CO 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872916 8sfe:A (3.36) BS01 ADP ? GO:0000242 ... P17987 37852256
    872917 8sfe:B (3.36) BS01 ADP ? GO:0002199 ... P78371 37852256
    872918 8sfe:D (3.36) BS01 ADP ? GO:0002199 ... P50991 37852256
    872919 8sfe:E (3.36) BS01 ADP ? GO:0003730 ... P48643 37852256
    872920 8sfe:G (3.36) BS01 ADP ? GO:0002199 ... P49368 37852256
    872921 8sfe:H (3.36) BS01 ADP ? GO:0005515 ... Q99832 37852256
    872922 8sfe:Q (3.36) BS01 ADP ? GO:0002199 ... P50990 37852256
    872923 8sfe:Z (3.36) BS01 ADP ? GO:0003723 ... P40227 37852256
    872924 8sfe:a (3.36) BS01 ADP ? GO:0000242 ... P17987 37852256
    872925 8sfe:b (3.36) BS01 ADP ? GO:0002199 ... P78371 37852256
    872926 8sfe:d (3.36) BS01 ADP ? GO:0002199 ... P50991 37852256
    872927 8sfe:e (3.36) BS01 ADP ? GO:0003730 ... P48643 37852256
    872928 8sfe:g (3.36) BS01 ADP ? GO:0002199 ... P49368 37852256
    872929 8sfe:h (3.36) BS01 ADP ? GO:0005515 ... Q99832 37852256
    872930 8sfe:q (3.36) BS01 ADP ? GO:0002199 ... P50990 37852256
    872931 8sfe:z (3.36) BS01 ADP ? GO:0003723 ... P40227 37852256
    872932 8sff:A (3.2) BS01 ADP ? GO:0000242 ... P17987 37852256
    872933 8sff:A (3.2) BS02 AF3 ? GO:0000242 ... P17987 37852256
    872934 8sff:B (3.2) BS01 ADP ? GO:0002199 ... P78371 37852256
    872935 8sff:B (3.2) BS02 AF3 ? GO:0002199 ... P78371 37852256
    872936 8sff:D (3.2) BS01 ADP ? GO:0002199 ... P50991 37852256
    872937 8sff:D (3.2) BS02 AF3 ? GO:0002199 ... P50991 37852256
    872938 8sff:E (3.2) BS01 ADP ? GO:0003730 ... P48643 37852256
    872939 8sff:E (3.2) BS02 AF3 ? GO:0003730 ... P48643 37852256
    872940 8sff:G (3.2) BS01 ADP ? GO:0002199 ... P49368 37852256
    872941 8sff:G (3.2) BS02 AF3 ? GO:0002199 ... P49368 37852256
    872942 8sff:H (3.2) BS01 ADP ? GO:0005515 ... Q99832 37852256
    872943 8sff:H (3.2) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    872944 8sff:Q (3.2) BS01 ADP ? GO:0002199 ... P50990 37852256
    872945 8sff:Q (3.2) BS02 MG ? GO:0002199 ... P50990 37852256
    872946 8sff:Q (3.2) BS03 AF3 ? GO:0002199 ... P50990 37852256
    872947 8sff:Z (3.2) BS01 ADP ? GO:0003723 ... P40227 37852256
    872948 8sff:Z (3.2) BS02 AF3 ? GO:0003723 ... P40227 37852256
    872949 8sff:a (3.2) BS01 ADP ? GO:0000242 ... P17987 37852256
    872950 8sff:a (3.2) BS02 AF3 ? GO:0000242 ... P17987 37852256
    872951 8sff:b (3.2) BS01 ADP ? GO:0002199 ... P78371 37852256
    872952 8sff:b (3.2) BS02 AF3 ? GO:0002199 ... P78371 37852256
    872953 8sff:d (3.2) BS01 ADP ? GO:0002199 ... P50991 37852256
    872954 8sff:d (3.2) BS02 AF3 ? GO:0002199 ... P50991 37852256
    872955 8sff:e (3.2) BS01 ADP ? GO:0003730 ... P48643 37852256
    872956 8sff:e (3.2) BS02 AF3 ? GO:0003730 ... P48643 37852256
    872957 8sff:g (3.2) BS01 ADP ? GO:0002199 ... P49368 37852256
    872958 8sff:g (3.2) BS02 AF3 ? GO:0002199 ... P49368 37852256
    872959 8sff:h (3.2) BS01 ADP ? GO:0005515 ... Q99832 37852256
    872960 8sff:h (3.2) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    872961 8sff:q (3.2) BS01 ADP ? GO:0002199 ... P50990 37852256
    872962 8sff:q (3.2) BS02 AF3 ? GO:0002199 ... P50990 37852256
    872963 8sff:z (3.2) BS01 ADP ? GO:0003723 ... P40227 37852256
    872964 8sff:z (3.2) BS02 AF3 ? GO:0003723 ... P40227 37852256
    872965 8sfh:A (3.4) BS01 rna N/A GO:0003677 ... U2UMQ6 38955179
    872966 8sfh:A (3.4) BS02 dna N/A GO:0003677 ... U2UMQ6 38955179
    872967 8sfh:A (3.4) BS03 dna N/A GO:0003677 ... U2UMQ6 38955179
    872968 8sfi:A (3.5) BS01 rna N/A GO:0003677 ... U2UMQ6 38955179
    872969 8sfi:A (3.5) BS02 dna N/A GO:0003677 ... U2UMQ6 38955179
    872970 8sfi:A (3.5) BS03 dna N/A GO:0003677 ... U2UMQ6 38955179
    872971 8sfj:A (3.6) BS01 rna N/A GO:0003677 ... U2UMQ6 38955179
    872972 8sfj:A (3.6) BS02 dna N/A GO:0003677 ... U2UMQ6 38955179
    872973 8sfj:A (3.6) BS03 dna N/A GO:0003677 ... U2UMQ6 38955179
    872974 8sfk:D (1.4) BS01 FE 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872975 8sfk:D (1.4) BS02 CO 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872976 8sfl:A (3.3) BS01 rna N/A GO:0003677 ... U2UMQ6 38955179
    872977 8sfl:A (3.3) BS02 dna N/A GO:0003677 ... U2UMQ6 38955179
    872978 8sfl:A (3.3) BS03 dna N/A GO:0003677 ... U2UMQ6 38955179
    872979 8sfm:D (1.5) BS01 FE 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872980 8sfm:D (1.5) BS02 CO 3.1.8.1 GO:0004063 ... Q97VT7 38818068
    872981 8sfn:A (3.3) BS01 rna N/A GO:0003677 ... U2UMQ6 38955179
    872982 8sfn:A (3.3) BS02 dna N/A GO:0003677 ... U2UMQ6 38955179
    872983 8sfn:A (3.3) BS03 dna N/A GO:0003677 ... U2UMQ6 38955179
    872984 8sfo:A (3.3) BS01 rna N/A GO:0003677 ... U2UMQ6 38955179
    872985 8sfo:A (3.3) BS02 dna N/A GO:0003677 ... U2UMQ6 38955179
    872986 8sfo:A (3.3) BS03 dna N/A GO:0003677 ... U2UMQ6 38955179
    872987 8sfo:A (3.3) BS04 MG N/A GO:0003677 ... U2UMQ6 38955179
    872988 8sfo:A (3.3) BS05 MG N/A GO:0003677 ... U2UMQ6 38955179
    872989 8sfp:A (3.8) BS01 rna N/A GO:0003677 ... U2UMQ6 38955179
    872990 8sfp:A (3.8) BS02 dna N/A GO:0003677 ... U2UMQ6 38955179
    872991 8sfp:A (3.8) BS03 dna N/A GO:0003677 ... U2UMQ6 38955179
    872992 8sfq:A (3.5) BS01 rna N/A GO:0003677 ... U2UMQ6 38955179
    872993 8sfq:A (3.5) BS02 dna N/A GO:0003677 ... U2UMQ6 38955179
    872994 8sfq:A (3.5) BS03 dna N/A GO:0003677 ... U2UMQ6 38955179
    872995 8sfr:A (3.5) BS01 rna N/A GO:0003677 ... U2UMQ6 38955179
    872996 8sfr:A (3.5) BS02 dna N/A GO:0003677 ... U2UMQ6 38955179
    872997 8sfr:A (3.5) BS03 dna N/A GO:0003677 ... U2UMQ6 38955179
    872998 8sft:A (2.75) BS01 UDP ? GO:0000166 ... T1KUK4 N/A
    872999 8sft:A (2.75) BS02 KMP ? GO:0000166 ... T1KUK4 N/A
    873000 8sft:B (2.75) BS01 KMP ? GO:0000166 ... T1KUK4 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).