SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    875801 8sri:A (2.73) BS05 APR ? GO:0005216 ... F2UB89 38773335
    875802 8sri:A (2.73) BS06 CLR ? GO:0005216 ... F2UB89 38773335
    875803 8sri:A (2.73) BS07 CLR ? GO:0005216 ... F2UB89 38773335
    875804 8sri:A (2.73) BS08 CLR ? GO:0005216 ... F2UB89 38773335
    875805 8sri:B (2.73) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    875806 8sri:B (2.73) BS02 APR ? GO:0005216 ... F2UB89 38773335
    875807 8sri:B (2.73) BS03 MG ? GO:0005216 ... F2UB89 38773335
    875808 8sri:B (2.73) BS04 MG ? GO:0005216 ... F2UB89 38773335
    875809 8sri:B (2.73) BS05 MG ? GO:0005216 ... F2UB89 38773335
    875810 8sri:B (2.73) BS06 APR ? GO:0005216 ... F2UB89 38773335
    875811 8sri:B (2.73) BS07 CLR ? GO:0005216 ... F2UB89 38773335
    875812 8sri:B (2.73) BS08 CLR ? GO:0005216 ... F2UB89 38773335
    875813 8sri:C (2.73) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    875814 8sri:C (2.73) BS02 APR ? GO:0005216 ... F2UB89 38773335
    875815 8sri:C (2.73) BS03 MG ? GO:0005216 ... F2UB89 38773335
    875816 8sri:C (2.73) BS04 MG ? GO:0005216 ... F2UB89 38773335
    875817 8sri:C (2.73) BS05 MG ? GO:0005216 ... F2UB89 38773335
    875818 8sri:C (2.73) BS06 APR ? GO:0005216 ... F2UB89 38773335
    875819 8sri:C (2.73) BS07 CLR ? GO:0005216 ... F2UB89 38773335
    875820 8sri:C (2.73) BS08 CLR ? GO:0005216 ... F2UB89 38773335
    875821 8sri:D (2.73) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    875822 8sri:D (2.73) BS02 CLR ? GO:0005216 ... F2UB89 38773335
    875823 8sri:D (2.73) BS03 CLR ? GO:0005216 ... F2UB89 38773335
    875824 8sri:D (2.73) BS04 APR ? GO:0005216 ... F2UB89 38773335
    875825 8sri:D (2.73) BS05 MG ? GO:0005216 ... F2UB89 38773335
    875826 8sri:D (2.73) BS06 MG ? GO:0005216 ... F2UB89 38773335
    875827 8sri:D (2.73) BS07 MG ? GO:0005216 ... F2UB89 38773335
    875828 8sri:D (2.73) BS08 APR ? GO:0005216 ... F2UB89 38773335
    875829 8srj:A (3.74) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    875830 8srj:A (3.74) BS02 CLR ? GO:0005216 ... F2UB89 38773335
    875831 8srj:A (3.74) BS03 CLR ? GO:0005216 ... F2UB89 38773335
    875832 8srj:B (3.74) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    875833 8srj:B (3.74) BS02 CLR ? GO:0005216 ... F2UB89 38773335
    875834 8srj:B (3.74) BS03 CLR ? GO:0005216 ... F2UB89 38773335
    875835 8srj:C (3.74) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    875836 8srj:C (3.74) BS02 CLR ? GO:0005216 ... F2UB89 38773335
    875837 8srj:C (3.74) BS03 CLR ? GO:0005216 ... F2UB89 38773335
    875838 8srj:D (3.74) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    875839 8srj:D (3.74) BS02 CLR ? GO:0005216 ... F2UB89 38773335
    875840 8srj:D (3.74) BS03 CLR ? GO:0005216 ... F2UB89 38773335
    875841 8srk:A (4.14) BS01 APR ? GO:0005216 ... F2UB89 38773335
    875842 8srk:A (4.14) BS02 CA ? GO:0005216 ... F2UB89 38773335
    875843 8srk:A (4.14) BS03 CLR ? GO:0005216 ... F2UB89 38773335
    875844 8srk:A (4.14) BS04 CLR ? GO:0005216 ... F2UB89 38773335
    875845 8srk:A (4.14) BS05 CLR ? GO:0005216 ... F2UB89 38773335
    875846 8srk:A (4.14) BS06 CLR ? GO:0005216 ... F2UB89 38773335
    875847 8srk:B (4.14) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    875848 8srk:B (4.14) BS02 APR ? GO:0005216 ... F2UB89 38773335
    875849 8srk:B (4.14) BS03 CA ? GO:0005216 ... F2UB89 38773335
    875850 8srk:B (4.14) BS04 CLR ? GO:0005216 ... F2UB89 38773335
    875851 8srk:B (4.14) BS05 CLR ? GO:0005216 ... F2UB89 38773335
    875852 8srk:B (4.14) BS06 CLR ? GO:0005216 ... F2UB89 38773335
    875853 8srk:C (4.14) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    875854 8srk:C (4.14) BS02 APR ? GO:0005216 ... F2UB89 38773335
    875855 8srk:C (4.14) BS03 CA ? GO:0005216 ... F2UB89 38773335
    875856 8srk:C (4.14) BS04 CLR ? GO:0005216 ... F2UB89 38773335
    875857 8srk:C (4.14) BS05 CLR ? GO:0005216 ... F2UB89 38773335
    875858 8srk:C (4.14) BS06 CLR ? GO:0005216 ... F2UB89 38773335
    875859 8srk:D (4.14) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    875860 8srk:D (4.14) BS02 CLR ? GO:0005216 ... F2UB89 38773335
    875861 8srk:D (4.14) BS03 CLR ? GO:0005216 ... F2UB89 38773335
    875862 8srk:D (4.14) BS04 APR ? GO:0005216 ... F2UB89 38773335
    875863 8srk:D (4.14) BS05 CA ? GO:0005216 ... F2UB89 38773335
    875864 8srk:D (4.14) BS06 CLR ? GO:0005216 ... F2UB89 38773335
    875865 8srl:A (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    875866 8srl:A (2.01) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    875867 8srl:B (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    875868 8srl:B (2.01) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    875869 8srl:C (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    875870 8srl:C (2.01) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    875871 8srl:D (2.01) BS01 FE2 N/A GO:0010436 ... Q7S860 N/A
    875872 8srl:D (2.01) BS02 PIT N/A GO:0010436 ... Q7S860 N/A
    875873 8sro:A (3.3) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875874 8sro:A (3.3) BS02 dna ? GO:0003700 ... Q99JB6 38030726
    875875 8sro:B (3.3) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875876 8sro:B (3.3) BS02 dna ? GO:0003700 ... Q99JB6 38030726
    875877 8sro:C (3.3) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875878 8sro:C (3.3) BS02 dna ? GO:0003700 ... Q99JB6 38030726
    875879 8sro:D (3.3) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875880 8sro:D (3.3) BS02 dna ? GO:0003700 ... Q99JB6 38030726
    875881 8srp:A (3.7) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875882 8srp:A (3.7) BS02 dna ? GO:0003700 ... Q99JB6 38030726
    875883 8srp:B (3.7) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875884 8srp:B (3.7) BS02 dna ? GO:0003700 ... Q99JB6 38030726
    875885 8srp:C (3.7) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875886 8srp:C (3.7) BS02 dna ? GO:0003700 ... Q99JB6 38030726
    875887 8srp:D (3.7) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875888 8srp:D (3.7) BS02 dna ? GO:0003700 ... Q99JB6 38030726
    875889 8srp:E (3.7) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875890 8srp:F (3.7) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875891 8srp:F (3.7) BS02 dna ? GO:0003700 ... Q99JB6 38030726
    875892 8srp:G (3.7) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875893 8srp:J (3.7) BS01 dna ? GO:0003700 ... Q99JB6 38030726
    875894 8srp:J (3.7) BS02 dna ? GO:0003700 ... Q99JB6 38030726
    875895 8srr:B (3.22) BS01 M7G N/A GO:0000184 ... P52298 39282949
    875896 8srs:A (2.79) BS01 rna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    875897 8srs:A (2.79) BS02 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    875898 8srs:A (2.79) BS03 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    875899 8srs:A (2.79) BS04 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    875900 8srs:A (2.79) BS05 MG 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    875901 8srs:A (2.79) BS06 MG 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    875902 8sru:A (1.5) BS01 peptide N/A GO:0004124 ... Q2G0Q8 N/A
    875903 8sru:B (1.5) BS01 peptide N/A GO:0004124 ... Q2G0Q8 N/A
    875904 8sru:C (1.5) BS01 peptide N/A GO:0004124 ... Q2G0Q8 N/A
    875905 8sru:D (1.5) BS01 peptide N/A GO:0004124 ... Q2G0Q8 N/A
    875906 8srv:A (1.32) BS01 peptide N/A GO:0004124 ... Q2G0Q8 N/A
    875907 8srv:B (1.32) BS01 peptide N/A GO:0004124 ... Q2G0Q8 N/A
    875908 8srw:A (2.15) BS01 peptide N/A GO:0004124 ... Q2G0Q8 N/A
    875909 8srw:B (2.15) BS01 peptide N/A GO:0004124 ... Q2G0Q8 N/A
    875910 8srw:C (2.15) BS01 peptide N/A GO:0004124 ... Q2G0Q8 N/A
    875911 8srw:D (2.15) BS01 peptide N/A GO:0004124 ... Q2G0Q8 N/A
    875912 8srx:A (2.09) BS01 K6G ? GO:0042981 ... Q16611 38088212
    875913 8srx:A (2.09) BS02 ZN ? GO:0042981 ... Q16611 38088212
    875914 8srx:A (2.09) BS03 K6G ? GO:0042981 ... Q16611 38088212
    875915 8srx:B (2.09) BS01 K6G ? GO:0042981 ... Q07812 38088212
    875916 8srx:B (2.09) BS02 K6G ? GO:0042981 ... Q07812 38088212
    875917 8srx:C (2.09) BS01 K6G ? GO:0042981 ... Q16611 38088212
    875918 8srx:C (2.09) BS02 K6G ? GO:0042981 ... Q16611 38088212
    875919 8srx:D (2.09) BS01 K6G ? GO:0042981 ... Q07812 38088212
    875920 8ss0:A (2.25) BS01 HEM 1.14.14.154 GO:0004497 ... Q16850 38206808
    875921 8ss0:A (2.25) BS02 WQR 1.14.14.154 GO:0004497 ... Q16850 38206808
    875922 8ss0:B (2.25) BS01 HEM 1.14.14.154 GO:0004497 ... Q16850 38206808
    875923 8ss0:B (2.25) BS02 WQR 1.14.14.154 GO:0004497 ... Q16850 38206808
    875924 8ss2:A (3.58) BS01 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875925 8ss2:A (3.58) BS02 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875926 8ss2:A (3.58) BS03 AJP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875927 8ss2:A (3.58) BS04 SPD ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875928 8ss2:B (3.58) BS01 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875929 8ss2:C (3.58) BS01 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875930 8ss2:C (3.58) BS02 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875931 8ss2:C (3.58) BS03 AJP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875932 8ss2:D (3.58) BS01 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875933 8ss3:A (3.21) BS01 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875934 8ss3:A (3.21) BS02 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875935 8ss3:A (3.21) BS03 AJP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875936 8ss3:A (3.21) BS04 AJP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875937 8ss3:A (3.21) BS05 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875938 8ss3:A (3.21) BS06 AJP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875939 8ss3:A (3.21) BS07 SPD ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875940 8ss3:B (3.21) BS01 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875941 8ss3:C (3.21) BS01 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875942 8ss3:C (3.21) BS02 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875943 8ss3:C (3.21) BS03 AJP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875944 8ss3:C (3.21) BS04 AJP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875945 8ss3:C (3.21) BS05 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875946 8ss3:C (3.21) BS06 AJP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875947 8ss3:D (3.21) BS01 AJP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875948 8ss3:D (3.21) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875949 8ss4:A (3.3) BS01 SPD ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875950 8ss6:A (3.01) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875951 8ss6:A (3.01) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875952 8ss6:A (3.01) BS03 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875953 8ss6:A (3.01) BS04 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875954 8ss6:B (3.01) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875955 8ss6:B (3.01) BS02 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875956 8ss6:B (3.01) BS03 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875957 8ss6:B (3.01) BS04 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875958 8ss6:B (3.01) BS05 SPD ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875959 8ss6:C (3.01) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875960 8ss6:C (3.01) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875961 8ss6:C (3.01) BS03 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875962 8ss6:C (3.01) BS04 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875963 8ss6:D (3.01) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875964 8ss6:D (3.01) BS02 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875965 8ss6:D (3.01) BS03 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875966 8ss6:D (3.01) BS04 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875967 8ss7:A (2.76) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875968 8ss7:A (2.76) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875969 8ss7:A (2.76) BS03 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875970 8ss7:A (2.76) BS04 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875971 8ss7:A (2.76) BS05 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875972 8ss7:B (2.76) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875973 8ss7:B (2.76) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875974 8ss7:B (2.76) BS03 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875975 8ss7:C (2.76) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875976 8ss7:C (2.76) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875977 8ss7:C (2.76) BS03 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875978 8ss7:C (2.76) BS04 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875979 8ss7:D (2.76) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875980 8ss7:D (2.76) BS02 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875981 8ss7:D (2.76) BS03 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875982 8ss7:D (2.76) BS04 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875983 8ss8:A (2.81) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875984 8ss8:A (2.81) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875985 8ss8:B (2.81) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875986 8ss8:B (2.81) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875987 8ss8:C (2.81) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875988 8ss8:C (2.81) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875989 8ss8:C (2.81) BS03 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875990 8ss8:D (2.81) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875991 8ss8:D (2.81) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875992 8ss9:A (2.72) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875993 8ss9:A (2.72) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875994 8ss9:A (2.72) BS03 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875995 8ss9:B (2.72) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875996 8ss9:B (2.72) BS02 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875997 8ss9:B (2.72) BS03 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875998 8ss9:C (2.72) BS01 6ZP ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    875999 8ss9:C (2.72) BS02 ZK1 ? GO:0000149 ... P19491
    Q8VHW8
    37653241
    876000 8ss9:C (2.72) BS03 CLR ? GO:0000149 ... P19491
    Q8VHW8
    37653241

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).