SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    877401 8s7t:C (2.1) BS01 FAD N/A GO:0003824 ... A0A2S7K3M2 39781101
    877402 8s7u:A (1.8) BS01 FAD N/A GO:0003824 ... A0A2S7K3M2 39781101
    877403 8s7u:B (1.8) BS01 FAD N/A GO:0003824 ... A0A2S7K3M2 39781101
    877404 8s7v:A (2.56) BS01 F43 N/A GO:0005737 ... A0A2L1CBG2 40240609
    877405 8s7v:B (2.56) BS01 F43 N/A GO:0005737 ... A0A2L1CBG2 40240609
    877406 8s7v:C (2.56) BS01 TP7 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877407 8s7v:C (2.56) BS02 COM N/A GO:0005737 ... A0A2L1CBB0 40240609
    877408 8s7v:C (2.56) BS03 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877409 8s7v:C (2.56) BS04 S5Q N/A GO:0005737 ... A0A2L1CBB0 40240609
    877410 8s7v:D (2.56) BS01 TP7 N/A GO:0005737 ... A0A2L1CBB3 40240609
    877411 8s7v:D (2.56) BS02 COM N/A GO:0005737 ... A0A2L1CBB3 40240609
    877412 8s7v:E (2.56) BS01 SHT N/A GO:0005737 ... A0A2L1CBB3 40240609
    877413 8s7v:F (2.56) BS01 SHT N/A GO:0005737 ... A0A2L1CBB0 40240609
    877414 8s7v:F (2.56) BS02 TP7 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877415 8s7v:F (2.56) BS03 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877416 8s7v:F (2.56) BS04 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877417 8s7v:G (2.56) BS01 S5Q N/A N/A G0H411 40240609
    877418 8s7v:H (2.56) BS01 S5Q N/A N/A G0H350 40240609
    877419 8s7v:H (2.56) BS02 S5Q N/A N/A G0H350 40240609
    877420 8s7v:I (2.56) BS01 S5Q N/A GO:0015948 ... G0H3B1 40240609
    877421 8s7v:I (2.56) BS02 S5Q N/A GO:0015948 ... G0H3B1 40240609
    877422 8s7v:K (2.56) BS01 ZN N/A GO:0005524 ... A0A2L1C9A1 40240609
    877423 8s7v:K (2.56) BS02 ATP N/A GO:0005524 ... A0A2L1C9A1 40240609
    877424 8s7v:K (2.56) BS03 ATP N/A GO:0005524 ... A0A2L1C9A1 40240609
    877425 8s7v:K (2.56) BS04 MG N/A GO:0005524 ... A0A2L1C9A1 40240609
    877426 8s7v:K (2.56) BS05 MG N/A GO:0005524 ... A0A2L1C9A1 40240609
    877427 8s7w:A (2.1) BS01 FAD N/A GO:0003824 ... A0A2S7K3M2 39781101
    877428 8s7w:B (2.1) BS01 FAD N/A GO:0003824 ... A0A2S7K3M2 39781101
    877429 8s7x:A (2.78) BS01 F43 N/A GO:0005737 ... A0A2L1CBG2 40240609
    877430 8s7x:B (2.78) BS01 SHT N/A GO:0005737 ... A0A2L1CBG2 40240609
    877431 8s7x:B (2.78) BS02 F43 N/A GO:0005737 ... A0A2L1CBG2 40240609
    877432 8s7x:C (2.78) BS01 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877433 8s7x:C (2.78) BS02 COM N/A GO:0005737 ... A0A2L1CBB0 40240609
    877434 8s7x:C (2.78) BS03 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877435 8s7x:C (2.78) BS04 TP7 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877436 8s7x:D (2.78) BS01 TP7 N/A GO:0005737 ... A0A2L1CBB3 40240609
    877437 8s7x:E (2.78) BS01 SHT N/A GO:0005737 ... A0A2L1CBB3 40240609
    877438 8s7x:F (2.78) BS01 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877439 8s7x:F (2.78) BS02 SHT N/A GO:0005737 ... A0A2L1CBB0 40240609
    877440 8s7x:F (2.78) BS03 F43 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877441 8s7x:F (2.78) BS04 TP7 N/A GO:0005737 ... A0A2L1CBB0 40240609
    877442 8s7x:G (2.78) BS01 S5Q N/A N/A G0H411 40240609
    877443 8s7x:H (2.78) BS01 S5Q N/A N/A A0A2L1C9H0 40240609
    877444 8s7x:H (2.78) BS02 S5Q N/A N/A A0A2L1C9H0 40240609
    877445 8s7x:I (2.78) BS01 S5Q N/A GO:0015948 ... G0H3B1 40240609
    877446 8s7x:I (2.78) BS02 S5Q N/A GO:0015948 ... G0H3B1 40240609
    877447 8s82:K (2.92) BS01 dna N/A GO:0000723 ... P32807 40707444
    877448 8s82:K (2.92) BS02 dna N/A GO:0000723 ... P32807 40707444
    877449 8s82:L (2.92) BS01 dna N/A GO:0000723 ... Q04437 40707444
    877450 8s82:L (2.92) BS02 dna N/A GO:0000723 ... Q04437 40707444
    877451 8s84:A (2.35) BS01 dna N/A GO:0000166 ... D0VWU9 39673482
    877452 8s84:A (2.35) BS02 dna N/A GO:0000166 ... D0VWU9 39673482
    877453 8s84:A (2.35) BS03 MG N/A GO:0000166 ... D0VWU9 39673482
    877454 8s84:A (2.35) BS04 MG N/A GO:0000166 ... D0VWU9 39673482
    877455 8s84:A (2.35) BS05 XG4 N/A GO:0000166 ... D0VWU9 39673482
    877456 8s84:A (2.35) BS06 MG N/A GO:0000166 ... D0VWU9 39673482
    877457 8s84:A (2.35) BS07 MG N/A GO:0000166 ... D0VWU9 39673482
    877458 8s85:A (1.75) BS01 A1H5R N/A GO:0004672 ... P23458 39447537
    877459 8s85:B (1.75) BS01 A1H5R N/A GO:0004672 ... P23458 39447537
    877460 8s87:A (1.82) BS01 MG N/A GO:0000166 ... D0VWU9 39673482
    877461 8s87:A (1.82) BS02 MG N/A GO:0000166 ... D0VWU9 39673482
    877462 8s87:A (1.82) BS03 MG N/A GO:0000166 ... D0VWU9 39673482
    877463 8s87:A (1.82) BS04 MG N/A GO:0000166 ... D0VWU9 39673482
    877464 8s87:A (1.82) BS05 MG N/A GO:0000166 ... D0VWU9 39673482
    877465 8s87:A (1.82) BS06 MG N/A GO:0000166 ... D0VWU9 39673482
    877466 8s87:A (1.82) BS07 MG N/A GO:0000166 ... D0VWU9 39673482
    877467 8s87:A (1.82) BS08 MG N/A GO:0000166 ... D0VWU9 39673482
    877468 8s88:A (2.07) BS01 SFX N/A GO:0003824 ... P07195 N/A
    877469 8s88:A (2.07) BS02 NAI N/A GO:0003824 ... P07195 N/A
    877470 8s88:B (2.07) BS01 SFX N/A GO:0003824 ... P07195 N/A
    877471 8s88:B (2.07) BS02 NAI N/A GO:0003824 ... P07195 N/A
    877472 8s88:C (2.07) BS01 SFX N/A GO:0003824 ... P07195 N/A
    877473 8s88:C (2.07) BS02 NAI N/A GO:0003824 ... P07195 N/A
    877474 8s88:D (2.07) BS01 NAI N/A GO:0003824 ... P07195 N/A
    877475 8s88:E (2.07) BS01 NAI N/A GO:0003824 ... P07195 N/A
    877476 8s88:F (2.07) BS01 SFX N/A GO:0003824 ... P07195 N/A
    877477 8s88:F (2.07) BS02 NAI N/A GO:0003824 ... P07195 N/A
    877478 8s88:G (2.07) BS01 NAI N/A GO:0003824 ... P07195 N/A
    877479 8s88:H (2.07) BS01 NAI N/A GO:0003824 ... P07195 N/A
    877480 8s88:I (2.07) BS01 SFX N/A GO:0003824 ... P07195 N/A
    877481 8s88:I (2.07) BS02 SFX N/A GO:0003824 ... P07195 N/A
    877482 8s88:I (2.07) BS03 NAI N/A GO:0003824 ... P07195 N/A
    877483 8s88:J (2.07) BS01 NAI N/A GO:0003824 ... P07195 N/A
    877484 8s88:K (2.07) BS01 NAI N/A GO:0003824 ... P07195 N/A
    877485 8s88:L (2.07) BS01 NAI N/A GO:0003824 ... P07195 N/A
    877486 8s8a:A (1.5) BS01 UK9 3.1.3.16
    3.1.3.74
    GO:0000287 ... Q96GD0 38856179
    877487 8s8a:A (1.5) BS02 MG 3.1.3.16
    3.1.3.74
    GO:0000287 ... Q96GD0 38856179
    877488 8s8c:A (1.9) BS01 GDP N/A GO:0003924 ... P01116 38924388
    877489 8s8c:A (1.9) BS02 A1H5U N/A GO:0003924 ... P01116 38924388
    877490 8s8d:A (3.45) BS01 rna N/A GO:0000028 ... Q6CN12 39193907
    877491 8s8d:B (3.45) BS01 rna N/A GO:0003735 ... Q6CWD0 39193907
    877492 8s8d:C (3.45) BS01 rna N/A GO:0003723 ... Q6CKL3 39193907
    877493 8s8d:C (3.45) BS02 rna N/A GO:0003723 ... Q6CKL3 39193907
    877494 8s8d:D (3.45) BS01 rna N/A GO:0003723 ... Q6CRK7 39193907
    877495 8s8d:D (3.45) BS02 rna N/A GO:0003723 ... Q6CRK7 39193907
    877496 8s8d:E (3.45) BS01 rna N/A GO:0002181 ... Q6CWJ2 39193907
    877497 8s8d:F (3.45) BS01 rna N/A GO:0003723 ... Q6CRA3 39193907
    877498 8s8d:G (3.45) BS01 rna N/A GO:0003735 ... Q6CM04 39193907
    877499 8s8d:H (3.45) BS01 rna N/A GO:0003735 ... Q6CTD6 39193907
    877500 8s8d:I (3.45) BS01 rna N/A GO:0000462 ... Q6CMG3 39193907
    877501 8s8d:J (3.45) BS01 rna N/A GO:0003723 ... Q6CM18 39193907
    877502 8s8d:K (3.45) BS01 rna N/A GO:0000054 ... Q6CVZ5 39193907
    877503 8s8d:L (3.45) BS01 rna N/A GO:0000028 ... Q6CX80 39193907
    877504 8s8d:M (3.45) BS01 rna N/A GO:0003735 ... Q6CLU4 39193907
    877505 8s8d:N (3.45) BS01 rna N/A GO:0003735 ... Q6CJK0 39193907
    877506 8s8d:O (3.45) BS01 rna N/A GO:0000028 ... P27069 39193907
    877507 8s8d:P (3.45) BS01 rna N/A GO:0000028 ... Q6CKV4 39193907
    877508 8s8d:Q (3.45) BS01 rna N/A GO:0000462 ... Q875N2 39193907
    877509 8s8d:R (3.45) BS01 rna N/A GO:0000028 ... Q6CWU3 39193907
    877510 8s8d:S (3.45) BS01 rna N/A GO:0000054 ... Q6CWT9 39193907
    877511 8s8d:T (3.45) BS01 rna N/A GO:0000028 ... Q6CXM0 39193907
    877512 8s8d:U (3.45) BS01 rna N/A GO:0003735 ... Q6CIM1 39193907
    877513 8s8d:V (3.45) BS01 rna N/A GO:0000447 ... Q6CXT6 39193907
    877514 8s8d:W (3.45) BS01 rna N/A GO:0003735 ... Q6CW21 39193907
    877515 8s8d:X (3.45) BS01 rna N/A GO:0003735 ... F2Z602 39193907
    877516 8s8d:Y (3.45) BS01 rna N/A GO:0003735 ... Q6CU44 39193907
    877517 8s8d:Z (3.45) BS01 rna N/A GO:0006451 ... Q6CW78 39193907
    877518 8s8d:a (3.45) BS01 rna N/A GO:0000054 ... Q6CS01 39193907
    877519 8s8d:a (3.45) BS02 rna N/A GO:0000054 ... Q6CS01 39193907
    877520 8s8d:a (3.45) BS03 ZN N/A GO:0000054 ... Q6CS01 39193907
    877521 8s8d:b (3.45) BS01 rna N/A GO:0000028 ... Q6CNL2 39193907
    877522 8s8d:b (3.45) BS02 ZN N/A GO:0000028 ... Q6CNL2 39193907
    877523 8s8d:c (3.45) BS01 rna N/A GO:0000028 ... P33285 39193907
    877524 8s8d:c (3.45) BS02 rna N/A GO:0000028 ... P33285 39193907
    877525 8s8d:d (3.45) BS01 rna N/A GO:0002181 ... Q6CPG3 39193907
    877526 8s8d:e (3.45) BS01 rna N/A GO:0003735 ... Q6CUH5 39193907
    877527 8s8d:f (3.45) BS01 rna N/A GO:0003735 ... P69061 39193907
    877528 8s8d:f (3.45) BS02 ZN N/A GO:0003735 ... P69061 39193907
    877529 8s8d:g (3.45) BS01 rna N/A GO:0005092 ... Q6CNI7 39193907
    877530 8s8d:i (3.45) BS01 rna N/A GO:0001677 ... P38912 39193907
    877531 8s8d:i (3.45) BS02 rna N/A GO:0001677 ... P38912 39193907
    877532 8s8d:j (3.45) BS01 rna N/A GO:0001731 ... P20459 39193907
    877533 8s8d:j (3.45) BS02 rna N/A GO:0001731 ... P20459 39193907
    877534 8s8d:k (3.45) BS01 rna N/A GO:0000049 ... P32481 39193907
    877535 8s8d:k (3.45) BS02 peptide N/A GO:0000049 ... P32481 39193907
    877536 8s8d:k (3.45) BS03 MET N/A GO:0000049 ... P32481 39193907
    877537 8s8e:A (3.85) BS01 rna N/A GO:0000028 ... Q6CN12 39193907
    877538 8s8e:B (3.85) BS01 rna N/A GO:0003735 ... Q6CWD0 39193907
    877539 8s8e:C (3.85) BS01 rna N/A GO:0003723 ... Q6CKL3 39193907
    877540 8s8e:C (3.85) BS02 rna N/A GO:0003723 ... Q6CKL3 39193907
    877541 8s8e:D (3.85) BS01 rna N/A GO:0003723 ... Q6CRK7 39193907
    877542 8s8e:D (3.85) BS02 rna N/A GO:0003723 ... Q6CRK7 39193907
    877543 8s8e:E (3.85) BS01 rna N/A GO:0002181 ... Q6CWJ2 39193907
    877544 8s8e:F (3.85) BS01 rna N/A GO:0003723 ... Q6CRA3 39193907
    877545 8s8e:F (3.85) BS02 rna N/A GO:0003723 ... Q6CRA3 39193907
    877546 8s8e:G (3.85) BS01 rna N/A GO:0003735 ... Q6CM04 39193907
    877547 8s8e:H (3.85) BS01 rna N/A GO:0003735 ... Q6CTD6 39193907
    877548 8s8e:I (3.85) BS01 rna N/A GO:0000462 ... Q6CMG3 39193907
    877549 8s8e:J (3.85) BS01 rna N/A GO:0003723 ... Q6CM18 39193907
    877550 8s8e:K (3.85) BS01 rna N/A GO:0000054 ... Q6CVZ5 39193907
    877551 8s8e:L (3.85) BS01 rna N/A GO:0000028 ... Q6CX80 39193907
    877552 8s8e:M (3.85) BS01 rna N/A GO:0003735 ... Q6CLU4 39193907
    877553 8s8e:N (3.85) BS01 rna N/A GO:0003735 ... Q6CJK0 39193907
    877554 8s8e:O (3.85) BS01 rna N/A GO:0000028 ... P27069 39193907
    877555 8s8e:P (3.85) BS01 rna N/A GO:0000028 ... Q6CKV4 39193907
    877556 8s8e:Q (3.85) BS01 rna N/A GO:0000462 ... Q875N2 39193907
    877557 8s8e:R (3.85) BS01 rna N/A GO:0000028 ... Q6CWU3 39193907
    877558 8s8e:S (3.85) BS01 rna N/A GO:0000054 ... Q6CWT9 39193907
    877559 8s8e:T (3.85) BS01 rna N/A GO:0000028 ... Q6CXM0 39193907
    877560 8s8e:U (3.85) BS01 rna N/A GO:0003735 ... Q6CIM1 39193907
    877561 8s8e:V (3.85) BS01 rna N/A GO:0000447 ... Q6CXT6 39193907
    877562 8s8e:W (3.85) BS01 rna N/A GO:0003735 ... Q6CW21 39193907
    877563 8s8e:X (3.85) BS01 rna N/A GO:0003735 ... F2Z602 39193907
    877564 8s8e:Y (3.85) BS01 rna N/A GO:0003735 ... Q6CU44 39193907
    877565 8s8e:Z (3.85) BS01 rna N/A GO:0006451 ... Q6CW78 39193907
    877566 8s8e:a (3.85) BS01 rna N/A GO:0000054 ... Q6CS01 39193907
    877567 8s8e:a (3.85) BS02 rna N/A GO:0000054 ... Q6CS01 39193907
    877568 8s8e:a (3.85) BS03 ZN N/A GO:0000054 ... Q6CS01 39193907
    877569 8s8e:b (3.85) BS01 rna N/A GO:0000028 ... Q6CNL2 39193907
    877570 8s8e:b (3.85) BS02 ZN N/A GO:0000028 ... Q6CNL2 39193907
    877571 8s8e:c (3.85) BS01 rna N/A GO:0000028 ... P33285 39193907
    877572 8s8e:c (3.85) BS02 rna N/A GO:0000028 ... P33285 39193907
    877573 8s8e:d (3.85) BS01 rna N/A GO:0002181 ... Q6CPG3 39193907
    877574 8s8e:e (3.85) BS01 rna N/A GO:0003735 ... Q6CUH5 39193907
    877575 8s8e:f (3.85) BS01 rna N/A GO:0003735 ... P69061 39193907
    877576 8s8e:f (3.85) BS02 ZN N/A GO:0003735 ... P69061 39193907
    877577 8s8e:g (3.85) BS01 rna N/A GO:0005092 ... Q6CNI7 39193907
    877578 8s8e:i (3.85) BS01 rna N/A GO:0001677 ... P38912 39193907
    877579 8s8e:i (3.85) BS02 rna N/A GO:0001677 ... P38912 39193907
    877580 8s8e:i (3.85) BS03 MG N/A GO:0001677 ... P38912 39193907
    877581 8s8e:j (3.85) BS01 rna N/A GO:0001731 ... P20459 39193907
    877582 8s8e:k (3.85) BS01 rna N/A GO:0000049 ... P32481 39193907
    877583 8s8e:k (3.85) BS02 peptide N/A GO:0000049 ... P32481 39193907
    877584 8s8e:k (3.85) BS03 MET N/A GO:0000049 ... P32481 39193907
    877585 8s8e:p (3.85) BS01 rna N/A GO:0001732 ... P32497 39193907
    877586 8s8f:A (3.95) BS01 rna N/A GO:0000028 ... Q6CN12 39193907
    877587 8s8f:B (3.95) BS01 rna N/A GO:0003735 ... Q6CWD0 39193907
    877588 8s8f:C (3.95) BS01 rna N/A GO:0003723 ... Q6CKL3 39193907
    877589 8s8f:D (3.95) BS01 rna N/A GO:0003723 ... Q6CRK7 39193907
    877590 8s8f:D (3.95) BS02 rna N/A GO:0003723 ... Q6CRK7 39193907
    877591 8s8f:E (3.95) BS01 rna N/A GO:0002181 ... Q6CWJ2 39193907
    877592 8s8f:F (3.95) BS01 rna N/A GO:0003723 ... Q6CRA3 39193907
    877593 8s8f:F (3.95) BS02 rna N/A GO:0003723 ... Q6CRA3 39193907
    877594 8s8f:G (3.95) BS01 rna N/A GO:0003735 ... Q6CM04 39193907
    877595 8s8f:H (3.95) BS01 rna N/A GO:0003735 ... Q6CTD6 39193907
    877596 8s8f:I (3.95) BS01 rna N/A GO:0000462 ... Q6CMG3 39193907
    877597 8s8f:J (3.95) BS01 rna N/A GO:0003723 ... Q6CM18 39193907
    877598 8s8f:K (3.95) BS01 rna N/A GO:0000054 ... Q6CVZ5 39193907
    877599 8s8f:L (3.95) BS01 rna N/A GO:0000028 ... Q6CX80 39193907
    877600 8s8f:M (3.95) BS01 rna N/A GO:0003735 ... Q6CLU4 39193907

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).