SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    878001 8s9w:A (1.69) BS02 CA ? GO:0005509 ... Q6S5I3 37769710
    878002 8s9w:B (1.69) BS01 CA ? GO:0005509 ... Q6S5I3 37769710
    878003 8s9w:B (1.69) BS02 CA ? GO:0005509 ... Q6S5I3 37769710
    878004 8s9x:A (3.44) BS01 rna ? N/A Q6ZED2 38637512
    878005 8s9x:A (3.44) BS02 rna ? N/A Q6ZED2 38637512
    878006 8s9x:B (3.44) BS01 rna ? N/A Q6ZED4 38637512
    878007 8s9x:D (3.44) BS01 rna ? N/A Q6ZED3 38637512
    878008 8s9x:D (3.44) BS02 rna ? N/A Q6ZED3 38637512
    878009 8s9x:E (3.44) BS01 rna ? N/A Q6ZED5 38637512
    878010 8s9x:E (3.44) BS02 rna ? N/A Q6ZED5 38637512
    878011 8s9z:A (1.6) BS01 peptide 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 N/A
    878012 8sa0:A (4.1) BS01 ATP N/A GO:0000086 ... P08183 40240353
    878013 8sa0:A (4.1) BS02 ATP N/A GO:0000086 ... P08183 40240353
    878014 8sa1:A (4.4) BS01 ATP N/A GO:0000086 ... P08183 40240353
    878015 8sa1:A (4.4) BS02 ATP N/A GO:0000086 ... P08183 40240353
    878016 8sa1:A (4.4) BS03 I6H N/A GO:0000086 ... P08183 40240353
    878017 8sa7:A (1.4) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878018 8sa7:B (1.4) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878019 8sa8:A (1.3) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878020 8sa8:A (1.3) BS02 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878021 8sa8:B (1.3) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878022 8sa8:B (1.3) BS02 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878023 8sa8:C (1.3) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878024 8sa8:C (1.3) BS02 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878025 8sa8:D (1.3) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878026 8sa8:D (1.3) BS02 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878027 8sa8:D (1.3) BS03 MG 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878028 8sa9:A (1.1) BS01 ZTS 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878029 8sa9:A (1.1) BS02 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878030 8sa9:B (1.1) BS01 ZTS 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878031 8sa9:B (1.1) BS02 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878032 8saa:A (1.45) BS01 MG 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878033 8saa:A (1.45) BS02 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878034 8saa:B (1.45) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878035 8sab:A (1.6) BS01 LYS 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878036 8sab:A (1.6) BS02 PP3 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878037 8sab:A (1.6) BS03 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878038 8sab:A (1.6) BS04 LYS 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878039 8sab:B (1.6) BS01 LYS 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878040 8sab:B (1.6) BS02 LYS 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878041 8sab:B (1.6) BS03 PP3 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878042 8sab:B (1.6) BS04 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878043 8sac:A (1.8) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878044 8sac:A (1.8) BS02 MG 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878045 8sac:A (1.8) BS03 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878046 8sac:B (1.8) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878047 8sac:B (1.8) BS02 MG 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878048 8sac:B (1.8) BS03 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878049 8sac:C (1.8) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878050 8sac:C (1.8) BS02 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878051 8sac:C (1.8) BS03 MG 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878052 8sac:D (1.8) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878053 8sac:D (1.8) BS02 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878054 8sac:D (1.8) BS03 MG 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878055 8sad:A (1.4) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878056 8sad:A (1.4) BS02 MG 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878057 8sad:B (1.4) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878058 8sad:B (1.4) BS02 MG 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878059 8sae:A (1.5) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878060 8sae:B (1.5) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    878061 8saf:A (1.23) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    878062 8saf:A (1.23) BS02 ZUJ 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    878063 8sag:A (1.52) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    878064 8sag:A (1.52) BS02 ZUS 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    878065 8sai:A (3.27) BS01 S12 ? GO:0004930 ... Q9UPC5 37733739
    878066 8sak:A (3.0) BS01 FUC ? GO:0005515 ... A0A2R4KP93 37756379
    878067 8sam:A (2.15) BS01 ATP ? GO:0004672 ... A0A6H0TJ16
    A0A7U1BAR4
    37901177
    878068 8sam:B (2.15) BS01 ATP ? GO:0004672 ... A0A6H0TJ16
    A0A7U1BAR4
    37901177
    878069 8san:D (4.6) BS01 MAN N/A N/A N/A 37188681
    878070 8san:H (4.6) BS01 MAN N/A N/A N/A 37188681
    878071 8san:L (4.6) BS01 MAN N/A N/A N/A 37188681
    878072 8sao:B (2.502) BS01 peptide ? GO:0004672 ... A0A6H0TJ16 37901177
    878073 8sao:D (2.502) BS01 peptide ? GO:0004672 ... A0A6H0TJ16 37901177
    878074 8saq:C (3.9) BS01 MAN N/A N/A N/A 37188681
    878075 8saq:H (3.9) BS01 MAN N/A N/A N/A 37188681
    878076 8saq:M (3.9) BS01 MAN N/A N/A N/A 37188681
    878077 8sar:D (3.82) BS01 MAN N/A N/A N/A 37188681
    878078 8sar:D (3.82) BS02 MAN N/A N/A N/A 37188681
    878079 8sar:I (3.82) BS01 MAN N/A N/A N/A 37188681
    878080 8sar:I (3.82) BS02 MAN N/A N/A N/A 37188681
    878081 8sar:M (3.82) BS01 MAN N/A N/A N/A 37188681
    878082 8sar:N (3.82) BS01 MAN N/A N/A N/A 37188681
    878083 8sar:N (3.82) BS02 MAN N/A N/A N/A 37188681
    878084 8sas:D (4.0) BS01 MAN N/A N/A N/A 37188681
    878085 8sas:D (4.0) BS02 MAN N/A N/A N/A 37188681
    878086 8sas:I (4.0) BS01 MAN N/A N/A N/A 37188681
    878087 8sas:N (4.0) BS01 MAN N/A N/A N/A 37188681
    878088 8sau:C (3.3) BS01 MAN N/A N/A N/A 37188681
    878089 8sau:C (3.3) BS02 MAN N/A N/A N/A 37188681
    878090 8sau:D (3.3) BS01 MAN N/A N/A N/A 37188681
    878091 8sau:D (3.3) BS02 MAN N/A N/A N/A 37188681
    878092 8sau:D (3.3) BS03 MAN N/A N/A N/A 37188681
    878093 8sau:H (3.3) BS01 MAN N/A N/A N/A 37188681
    878094 8sau:H (3.3) BS02 MAN N/A N/A N/A 37188681
    878095 8sau:I (3.3) BS01 MAN N/A N/A N/A 37188681
    878096 8sau:I (3.3) BS02 MAN N/A N/A N/A 37188681
    878097 8sau:M (3.3) BS01 MAN N/A N/A N/A 37188681
    878098 8sau:M (3.3) BS02 MAN N/A N/A N/A 37188681
    878099 8sau:N (3.3) BS01 MAN N/A N/A N/A 37188681
    878100 8sau:N (3.3) BS02 MAN N/A N/A N/A 37188681
    878101 8sax:D (4.0) BS01 MAN N/A N/A N/A 37188681
    878102 8sax:H (4.0) BS01 MAN N/A N/A N/A 37188681
    878103 8sax:L (4.0) BS01 MAN N/A N/A N/A 37188681
    878104 8say:D (3.4) BS01 MAN N/A N/A N/A 37188681
    878105 8say:H (3.4) BS01 MAN N/A N/A N/A 37188681
    878106 8say:I (3.4) BS01 MAN N/A N/A N/A 37188681
    878107 8say:I (3.4) BS02 MAN N/A N/A N/A 37188681
    878108 8say:N (3.4) BS01 MAN N/A N/A N/A 37188681
    878109 8saz:C (3.9) BS01 MAN N/A N/A N/A 37188681
    878110 8saz:C (3.9) BS02 MAN N/A N/A N/A 37188681
    878111 8saz:C (3.9) BS03 MAN N/A N/A N/A 37188681
    878112 8saz:D (3.9) BS01 MAN N/A N/A N/A 37188681
    878113 8saz:D (3.9) BS02 MAN N/A N/A N/A 37188681
    878114 8saz:H (3.9) BS01 MAN N/A N/A N/A 37188681
    878115 8saz:H (3.9) BS02 MAN N/A N/A N/A 37188681
    878116 8saz:I (3.9) BS01 MAN N/A N/A N/A 37188681
    878117 8saz:I (3.9) BS02 MAN N/A N/A N/A 37188681
    878118 8saz:M (3.9) BS01 MAN N/A N/A N/A 37188681
    878119 8saz:N (3.9) BS01 MAN N/A N/A N/A 37188681
    878120 8saz:N (3.9) BS02 MAN N/A N/A N/A 37188681
    878121 8sb0:C (4.2) BS01 MAN N/A N/A N/A 37188681
    878122 8sb0:C (4.2) BS02 MAN N/A N/A N/A 37188681
    878123 8sb0:D (4.2) BS01 MAN N/A N/A N/A 37188681
    878124 8sb0:D (4.2) BS02 MAN N/A N/A N/A 37188681
    878125 8sb0:H (4.2) BS01 MAN N/A N/A N/A 37188681
    878126 8sb0:H (4.2) BS02 MAN N/A N/A N/A 37188681
    878127 8sb0:H (4.2) BS03 MAN N/A N/A N/A 37188681
    878128 8sb0:I (4.2) BS01 MAN N/A N/A N/A 37188681
    878129 8sb0:M (4.2) BS01 MAN N/A N/A N/A 37188681
    878130 8sb0:M (4.2) BS02 MAN N/A N/A N/A 37188681
    878131 8sb0:N (4.2) BS01 MAN N/A N/A N/A 37188681
    878132 8sb1:D (4.3) BS01 MAN N/A N/A N/A 37188681
    878133 8sb1:D (4.3) BS02 MAN N/A N/A N/A 37188681
    878134 8sb1:D (4.3) BS03 MAN N/A N/A N/A 37188681
    878135 8sb1:I (4.3) BS01 MAN N/A N/A N/A 37188681
    878136 8sb1:I (4.3) BS02 MAN N/A N/A N/A 37188681
    878137 8sb1:I (4.3) BS03 MAN N/A N/A N/A 37188681
    878138 8sb1:N (4.3) BS01 MAN N/A N/A N/A 37188681
    878139 8sb1:N (4.3) BS02 MAN N/A N/A N/A 37188681
    878140 8sb1:N (4.3) BS03 MAN N/A N/A N/A 37188681
    878141 8sb2:D (3.5) BS01 MAN N/A N/A N/A 37188681
    878142 8sb2:D (3.5) BS02 MAN N/A N/A N/A 37188681
    878143 8sb2:I (3.5) BS01 MAN N/A N/A N/A 37188681
    878144 8sb2:I (3.5) BS02 MAN N/A N/A N/A 37188681
    878145 8sb2:N (3.5) BS01 MAN N/A N/A N/A 37188681
    878146 8sb2:N (3.5) BS02 MAN N/A N/A N/A 37188681
    878147 8sb3:C (4.1) BS01 BMA N/A N/A N/A 37188681
    878148 8sb3:C (4.1) BS02 MAN N/A N/A N/A 37188681
    878149 8sb3:D (4.1) BS01 MAN N/A N/A N/A 37188681
    878150 8sb3:H (4.1) BS01 BMA N/A N/A N/A 37188681
    878151 8sb3:H (4.1) BS02 MAN N/A N/A N/A 37188681
    878152 8sb3:I (4.1) BS01 MAN N/A N/A N/A 37188681
    878153 8sb3:M (4.1) BS01 BMA N/A N/A N/A 37188681
    878154 8sb3:M (4.1) BS02 MAN N/A N/A N/A 37188681
    878155 8sb3:M (4.1) BS03 MAN N/A N/A N/A 37188681
    878156 8sb3:N (4.1) BS01 MAN N/A N/A N/A 37188681
    878157 8sb4:C (3.6) BS01 MAN N/A N/A N/A 37188681
    878158 8sb4:D (3.6) BS01 MAN N/A N/A N/A 37188681
    878159 8sb4:D (3.6) BS02 MAN N/A N/A N/A 37188681
    878160 8sb4:I (3.6) BS01 MAN N/A N/A N/A 37188681
    878161 8sb4:M (3.6) BS01 MAN N/A N/A N/A 37188681
    878162 8sb4:N (3.6) BS01 MAN N/A N/A N/A 37188681
    878163 8sb4:N (3.6) BS02 MAN N/A N/A N/A 37188681
    878164 8sb5:D (3.9) BS01 MAN N/A N/A N/A 37188681
    878165 8sb5:D (3.9) BS02 MAN N/A N/A N/A 37188681
    878166 8sb5:I (3.9) BS01 MAN N/A N/A N/A 37188681
    878167 8sb5:I (3.9) BS02 MAN N/A N/A N/A 37188681
    878168 8sb5:I (3.9) BS03 MAN N/A N/A N/A 37188681
    878169 8sb5:I (3.9) BS04 MAN N/A N/A N/A 37188681
    878170 8sb5:M (3.9) BS01 MAN N/A N/A N/A 37188681
    878171 8sb5:N (3.9) BS01 MAN N/A N/A N/A 37188681
    878172 8sb5:N (3.9) BS02 MAN N/A N/A N/A 37188681
    878173 8sb5:N (3.9) BS03 MAN N/A N/A N/A 37188681
    878174 8sb6:A (1.8) BS01 peptide ? N/A P25440 37731000
    878175 8sb6:B (1.8) BS01 peptide ? N/A P25440 37731000
    878176 8sb7:A (4.0) BS01 ATP N/A GO:0000086 ... P08183 40240353
    878177 8sb7:A (4.0) BS02 MG N/A GO:0000086 ... P08183 40240353
    878178 8sb7:A (4.0) BS03 ATP N/A GO:0000086 ... P08183 40240353
    878179 8sb7:A (4.0) BS04 I6H N/A GO:0000086 ... P08183 40240353
    878180 8sb8:A (3.9) BS01 MG N/A GO:0000086 ... P08183 40240353
    878181 8sb8:A (3.9) BS02 MG N/A GO:0000086 ... P08183 40240353
    878182 8sb8:A (3.9) BS03 AOV N/A GO:0000086 ... P08183 40240353
    878183 8sb8:A (3.9) BS04 AOV N/A GO:0000086 ... P08183 40240353
    878184 8sb9:A (4.1) BS01 ATP N/A GO:0000086 ... P08183 40240353
    878185 8sb9:A (4.1) BS02 MG N/A GO:0000086 ... P08183 40240353
    878186 8sb9:A (4.1) BS03 VLB N/A GO:0000086 ... P08183 40240353
    878187 8sb9:A (4.1) BS04 VLB N/A GO:0000086 ... P08183 40240353
    878188 8sb9:A (4.1) BS05 ATP N/A GO:0000086 ... P08183 40240353
    878189 8sba:A (3.9) BS01 ATP N/A GO:0000086 ... P08183 40240353
    878190 8sba:A (3.9) BS02 MG N/A GO:0000086 ... P08183 40240353
    878191 8sba:A (3.9) BS03 MG N/A GO:0000086 ... P08183 40240353
    878192 8sba:A (3.9) BS04 VLB N/A GO:0000086 ... P08183 40240353
    878193 8sba:A (3.9) BS05 VLB N/A GO:0000086 ... P08183 40240353
    878194 8sba:A (3.9) BS06 ATP N/A GO:0000086 ... P08183 40240353
    878195 8sbb:A (3.59) BS01 FE ? GO:0005886 ... A0A1I2KHB9 37069165
    878196 8sbb:A (3.59) BS02 FE ? GO:0005886 ... A0A1I2KHB9 37069165
    878197 8sbc:A (2.3) BS01 ZTV 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001944 ... P42336 37399505
    878198 8sbg:A (1.94) BS01 PLP 4.1.99.1 GO:0006520 ... A0A3E5GM45 37633277
    878199 8sbi:A (2.73) BS01 HEM 1.14.14.154 GO:0004497 ... Q16850 N/A
    878200 8sbi:B (2.73) BS01 HEM 1.14.14.154 GO:0004497 ... Q16850 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).