SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    878401 8t4s:H (2.6) BS01 rna ? GO:0001843 ... P62081 37733586
    878402 8t4s:I (2.6) BS01 rna ? GO:0000462 ... P62241 37733586
    878403 8t4s:J (2.6) BS01 rna ? GO:0002181 ... P46781 37733586
    878404 8t4s:K (2.6) BS01 rna ? GO:0002181 ... P46783 37733586
    878405 8t4s:L (2.6) BS01 rna ? GO:0002181 ... P62280 37733586
    878406 8t4s:M (2.6) BS01 rna ? GO:0002181 ... P25398 37733586
    878407 8t4s:N (2.6) BS01 rna ? GO:0002181 ... P62277 37733586
    878408 8t4s:O (2.6) BS01 rna ? GO:0000028 ... P62263 37733586
    878409 8t4s:P (2.6) BS01 rna ? GO:0000028 ... P62841 37733586
    878410 8t4s:Q (2.6) BS01 rna ? GO:0000462 ... P62249 37733586
    878411 8t4s:R (2.6) BS01 rna ? GO:0002181 ... P08708 37733586
    878412 8t4s:S (2.6) BS01 rna ? GO:0002181 ... P62269 37733586
    878413 8t4s:T (2.6) BS01 rna ? GO:0000028 ... P39019 37733586
    878414 8t4s:U (2.6) BS01 rna ? GO:0002181 ... P60866 37733586
    878415 8t4s:W (2.6) BS01 rna ? GO:0002181 ... P62244 37733586
    878416 8t4s:X (2.6) BS01 rna ? GO:0002181 ... P62266 37733586
    878417 8t4s:Y (2.6) BS01 rna ? GO:0002181 ... P62847 37733586
    878418 8t4s:Z (2.6) BS01 rna ? GO:0002181 ... P62851 37733586
    878419 8t4s:a (2.6) BS01 rna ? GO:0002181 ... P62854 37733586
    878420 8t4s:a (2.6) BS02 ZN ? GO:0002181 ... P62854 37733586
    878421 8t4s:b (2.6) BS01 rna ? GO:0000028 ... P42677 37733586
    878422 8t4s:c (2.6) BS01 rna ? GO:0000028 ... P62857 37733586
    878423 8t4s:d (2.6) BS01 rna ? GO:0002181 ... P62273 37733586
    878424 8t4s:d (2.6) BS02 ZN ? GO:0002181 ... P62273 37733586
    878425 8t4s:e (2.6) BS01 rna ? GO:0002181 ... P62861 37733586
    878426 8t4s:f (2.6) BS01 rna ? GO:0002181 ... P62979 37733586
    878427 8t4s:f (2.6) BS02 ZN ? GO:0002181 ... P62979 37733586
    878428 8t4s:g (2.6) BS01 rna ? GO:0001891 ... P63244 37733586
    878429 8t4v:A (1.47) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 38443470
    878430 8t4v:A (1.47) BS02 Y63 3.6.5.2 GO:0003924 ... P01116 38443470
    878431 8t4v:B (1.47) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 38443470
    878432 8t4v:B (1.47) BS02 Y63 3.6.5.2 GO:0003924 ... P01116 38443470
    878433 8t4y:A (3.58) BS01 CMP N/A GO:0003254 ... O60741 38890331
    878434 8t4y:B (3.58) BS01 CMP N/A GO:0003254 ... O60741 38890331
    878435 8t4y:C (3.58) BS01 CMP N/A GO:0003254 ... O60741 38890331
    878436 8t4y:D (3.58) BS01 CMP N/A GO:0003254 ... O60741 38890331
    878437 8t4z:A (2.691) BS01 Y73 N/A N/A P11609 39141352
    878438 8t50:A (3.6) BS01 CMP N/A GO:0003254 ... O60741 38890331
    878439 8t50:B (3.6) BS01 CMP N/A GO:0003254 ... O60741 38890331
    878440 8t50:C (3.6) BS01 CMP N/A GO:0003254 ... O60741 38890331
    878441 8t50:D (3.6) BS01 CMP N/A GO:0003254 ... O60741 38890331
    878442 8t51:A (1.9) BS01 peptide N/A N/A N/A 39333507
    878443 8t51:B (1.9) BS01 peptide N/A N/A N/A 39333507
    878444 8t51:B (1.9) BS02 ZN N/A N/A N/A 39333507
    878445 8t51:B (1.9) BS03 ZN N/A N/A N/A 39333507
    878446 8t51:C (1.9) BS01 peptide N/A N/A N/A 39333507
    878447 8t51:D (1.9) BS01 peptide N/A N/A N/A 39333507
    878448 8t52:A (2.07) BS01 QD6 N/A GO:0003676 ... P12497 38328097
    878449 8t55:A (2.2) BS01 ZI3 ? GO:0045022 ... A4D1P6 37996079
    878450 8t55:B (2.2) BS01 ZI3 ? GO:0045022 ... A4D1P6 37996079
    878451 8t55:C (2.2) BS01 ZI3 ? GO:0045022 ... A4D1P6 37996079
    878452 8t56:A (2.8) BS01 peptide ? GO:0005227 ... Q5XEZ5 38103547
    878453 8t56:A (2.8) BS02 Y01 ? GO:0005227 ... Q5XEZ5 38103547
    878454 8t56:A (2.8) BS03 LBN ? GO:0005227 ... Q5XEZ5 38103547
    878455 8t56:A (2.8) BS04 CLR ? GO:0005227 ... Q5XEZ5 38103547
    878456 8t56:A (2.8) BS05 CLR ? GO:0005227 ... Q5XEZ5 38103547
    878457 8t56:B (2.8) BS01 peptide ? GO:0005227 ... Q5XEZ5 38103547
    878458 8t56:B (2.8) BS02 Y01 ? GO:0005227 ... Q5XEZ5 38103547
    878459 8t56:B (2.8) BS03 LBN ? GO:0005227 ... Q5XEZ5 38103547
    878460 8t56:B (2.8) BS04 CLR ? GO:0005227 ... Q5XEZ5 38103547
    878461 8t56:B (2.8) BS05 CLR ? GO:0005227 ... Q5XEZ5 38103547
    878462 8t56:D (2.8) BS01 CLR N/A N/A N/A 38103547
    878463 8t56:D (2.8) BS02 CLR N/A N/A N/A 38103547
    878464 8t56:E (2.8) BS01 peptide N/A N/A N/A 38103547
    878465 8t56:E (2.8) BS02 LBN N/A N/A N/A 38103547
    878466 8t56:E (2.8) BS03 CLR N/A N/A N/A 38103547
    878467 8t56:H (2.8) BS01 CLR N/A N/A N/A 38103547
    878468 8t56:H (2.8) BS02 CLR N/A N/A N/A 38103547
    878469 8t56:I (2.8) BS01 peptide N/A N/A N/A 38103547
    878470 8t56:I (2.8) BS02 LBN N/A N/A N/A 38103547
    878471 8t56:I (2.8) BS03 CLR N/A N/A N/A 38103547
    878472 8t57:A (2.7) BS01 CLR ? GO:0005227 ... Q8GUH7 38103547
    878473 8t57:A (2.7) BS02 CLR ? GO:0005227 ... Q8GUH7 38103547
    878474 8t57:B (2.7) BS01 CLR ? GO:0005227 ... Q8GUH7 38103547
    878475 8t57:B (2.7) BS02 CLR ? GO:0005227 ... Q8GUH7 38103547
    878476 8t59:A (2.0) BS01 peptide N/A N/A N/A 39333507
    878477 8t59:B (2.0) BS01 peptide N/A N/A N/A 39333507
    878478 8t59:B (2.0) BS02 ZN N/A N/A N/A 39333507
    878479 8t59:B (2.0) BS03 ZN N/A N/A N/A 39333507
    878480 8t59:B (2.0) BS04 ZN N/A N/A N/A 39333507
    878481 8t59:C (2.0) BS01 peptide N/A N/A N/A 39333507
    878482 8t59:D (2.0) BS01 peptide N/A N/A N/A 39333507
    878483 8t59:D (2.0) BS02 ZN N/A N/A N/A 39333507
    878484 8t59:D (2.0) BS03 ZN N/A N/A N/A 39333507
    878485 8t59:D (2.0) BS04 ZN N/A N/A N/A 39333507
    878486 8t5a:A (1.93) BS01 WBV N/A GO:0003676 ... P12497 38328097
    878487 8t5b:A (2.08) BS01 QD6 N/A GO:0003676 ... P12497 38328097
    878488 8t5b:A (2.08) BS02 MG N/A GO:0003676 ... P12497 38328097
    878489 8t5b:A (2.08) BS03 QD6 N/A GO:0003676 ... P12497 38328097
    878490 8t5b:B (2.08) BS01 QD6 N/A GO:0003676 ... P12497 38328097
    878491 8t5b:B (2.08) BS02 QD6 N/A GO:0003676 ... P12497 38328097
    878492 8t5b:B (2.08) BS03 MG N/A GO:0003676 ... P12497 38328097
    878493 8t5b:C (2.08) BS01 QD6 N/A GO:0003676 ... P12497 38328097
    878494 8t5b:D (2.08) BS01 QD6 N/A GO:0003676 ... P12497 38328097
    878495 8t5c:I (4.7) BS01 MAN N/A N/A N/A 38177144
    878496 8t5c:L (4.7) BS01 MAN N/A N/A N/A 38177144
    878497 8t5c:L (4.7) BS02 MAN N/A N/A N/A 38177144
    878498 8t5d:0 (3.2) BS01 rna N/A GO:0000027 ... P0A7N4 38185325
    878499 8t5d:1 (3.2) BS01 rna N/A GO:0000027 ... P0A7N9 38185325
    878500 8t5d:2 (3.2) BS01 rna N/A GO:0002181 ... P0A7P5 38185325
    878501 8t5d:3 (3.2) BS01 rna N/A GO:0002181 ... P0A7Q1 38185325
    878502 8t5d:4 (3.2) BS01 rna N/A GO:0002181 ... P0A7Q6 38185325
    878503 8t5d:C (3.2) BS01 rna N/A GO:0000027 ... P60422 38185325
    878504 8t5d:D (3.2) BS01 rna N/A GO:0000027 ... P60438 38185325
    878505 8t5d:E (3.2) BS01 rna N/A GO:0001070 ... P60723 38185325
    878506 8t5d:F (3.2) BS01 rna N/A GO:0000027 ... P62399 38185325
    878507 8t5d:F (3.2) BS02 rna N/A GO:0000027 ... P62399 38185325
    878508 8t5d:F (3.2) BS03 rna N/A GO:0000027 ... P62399 38185325
    878509 8t5d:G (3.2) BS01 rna N/A GO:0000027 ... P0AG55 38185325
    878510 8t5d:J (3.2) BS01 rna N/A GO:0002181 ... P0AA10 38185325
    878511 8t5d:K (3.2) BS01 rna N/A GO:0002181 ... P0ADY3 38185325
    878512 8t5d:K (3.2) BS02 rna N/A GO:0002181 ... P0ADY3 38185325
    878513 8t5d:L (3.2) BS01 rna N/A GO:0002181 ... P02413 38185325
    878514 8t5d:M (3.2) BS01 rna N/A GO:0000027 ... P0ADY7 38185325
    878515 8t5d:N (3.2) BS01 rna N/A GO:0000027 ... P0AG44 38185325
    878516 8t5d:O (3.2) BS01 rna N/A GO:0002181 ... P0C018 38185325
    878517 8t5d:O (3.2) BS02 rna N/A GO:0002181 ... P0C018 38185325
    878518 8t5d:P (3.2) BS01 rna N/A GO:0000027 ... P0A7K6 38185325
    878519 8t5d:P (3.2) BS02 rna N/A GO:0000027 ... P0A7K6 38185325
    878520 8t5d:Q (3.2) BS01 rna N/A GO:0000027 ... P0A7L3 38185325
    878521 8t5d:R (3.2) BS01 rna N/A GO:0002181 ... P0AG48 38185325
    878522 8t5d:S (3.2) BS01 rna N/A GO:0002181 ... P61175 38185325
    878523 8t5d:T (3.2) BS01 rna N/A GO:0000027 ... P0ADZ0 38185325
    878524 8t5d:U (3.2) BS01 rna N/A GO:0000027 ... P60624 38185325
    878525 8t5d:V (3.2) BS01 rna N/A GO:0000027 ... P68919 38185325
    878526 8t5d:W (3.2) BS01 rna N/A GO:0000027 ... P0A7L8 38185325
    878527 8t5d:W (3.2) BS02 rna N/A GO:0000027 ... P0A7L8 38185325
    878528 8t5d:X (3.2) BS01 rna N/A GO:0000027 ... P0A7M2 38185325
    878529 8t5d:Y (3.2) BS01 rna N/A GO:0000027 ... P0A7M6 38185325
    878530 8t5d:Z (3.2) BS01 rna N/A GO:0000027 ... P0AG51 38185325
    878531 8t5d:Z (3.2) BS02 rna N/A GO:0000027 ... P0AG51 38185325
    878532 8t5d:a (3.2) BS01 rna N/A GO:0000028 ... P0A7V0 38185325
    878533 8t5d:b (3.2) BS01 rna N/A N/A P0A7V3 38185325
    878534 8t5d:b (3.2) BS02 rna N/A N/A P0A7V3 38185325
    878535 8t5d:c (3.2) BS01 rna N/A GO:0000028 ... P0A7V8 38185325
    878536 8t5d:d (3.2) BS01 rna N/A GO:0000028 ... P0A7W1 38185325
    878537 8t5d:d (3.2) BS02 rna N/A GO:0000028 ... P0A7W1 38185325
    878538 8t5d:e (3.2) BS01 rna N/A N/A P02358 38185325
    878539 8t5d:f (3.2) BS01 rna N/A N/A P02359 38185325
    878540 8t5d:g (3.2) BS01 rna N/A GO:0000028 ... P0A7W7 38185325
    878541 8t5d:h (3.2) BS01 rna N/A GO:0000049 ... P0A7X3 38185325
    878542 8t5d:h (3.2) BS02 rna N/A GO:0000049 ... P0A7X3 38185325
    878543 8t5d:i (3.2) BS01 rna N/A GO:0000049 ... P0A7R5 38185325
    878544 8t5d:j (3.2) BS01 rna N/A GO:0002181 ... P0A7R9 38185325
    878545 8t5d:k (3.2) BS01 rna N/A GO:0000049 ... P0A7S3 38185325
    878546 8t5d:l (3.2) BS01 rna N/A GO:0000049 ... P0A7S9 38185325
    878547 8t5d:l (3.2) BS02 rna N/A GO:0000049 ... P0A7S9 38185325
    878548 8t5d:m (3.2) BS01 rna N/A GO:0000028 ... P0AG59 38185325
    878549 8t5d:n (3.2) BS01 rna N/A GO:0000028 ... P0ADZ4 38185325
    878550 8t5d:n (3.2) BS02 rna N/A GO:0000028 ... P0ADZ4 38185325
    878551 8t5d:o (3.2) BS01 rna N/A GO:0000028 ... P0A7T3 38185325
    878552 8t5d:p (3.2) BS01 rna N/A GO:0000028 ... P0AG63 38185325
    878553 8t5d:q (3.2) BS01 rna N/A N/A P0A7T7 38185325
    878554 8t5d:r (3.2) BS01 rna N/A N/A P0A7U3 38185325
    878555 8t5d:s (3.2) BS01 rna N/A GO:0000028 ... P0A7U7 38185325
    878556 8t5d:t (3.2) BS01 rna N/A N/A P68679 38185325
    878557 8t5e:A (3.0) BS01 peptide N/A N/A N/A 38109936
    878558 8t5g:A (1.92) BS01 THA ? GO:0005085 ... Q07890 38156904
    878559 8t5h:0 (3.3) BS01 rna N/A GO:0000027 ... P0A7N4 38185325
    878560 8t5h:1 (3.3) BS01 rna N/A GO:0000027 ... P0A7N9 38185325
    878561 8t5h:2 (3.3) BS01 rna N/A GO:0002181 ... P0A7P5 38185325
    878562 8t5h:3 (3.3) BS01 rna N/A GO:0002181 ... P0A7Q1 38185325
    878563 8t5h:4 (3.3) BS01 rna N/A GO:0002181 ... P0A7Q6 38185325
    878564 8t5h:C (3.3) BS01 rna N/A GO:0000027 ... P60422 38185325
    878565 8t5h:D (3.3) BS01 rna N/A GO:0000027 ... P60438 38185325
    878566 8t5h:E (3.3) BS01 rna N/A GO:0001070 ... P60723 38185325
    878567 8t5h:F (3.3) BS01 rna N/A GO:0000027 ... P62399 38185325
    878568 8t5h:F (3.3) BS02 rna N/A GO:0000027 ... P62399 38185325
    878569 8t5h:F (3.3) BS03 rna N/A GO:0000027 ... P62399 38185325
    878570 8t5h:G (3.3) BS01 rna N/A GO:0000027 ... P0AG55 38185325
    878571 8t5h:J (3.3) BS01 rna N/A GO:0002181 ... P0AA10 38185325
    878572 8t5h:K (3.3) BS01 rna N/A GO:0002181 ... P0ADY3 38185325
    878573 8t5h:L (3.3) BS01 rna N/A GO:0002181 ... P02413 38185325
    878574 8t5h:M (3.3) BS01 rna N/A GO:0000027 ... P0ADY7 38185325
    878575 8t5h:M (3.3) BS02 rna N/A GO:0000027 ... P0ADY7 38185325
    878576 8t5h:N (3.3) BS01 rna N/A GO:0000027 ... P0AG44 38185325
    878577 8t5h:O (3.3) BS01 rna N/A GO:0002181 ... P0C018 38185325
    878578 8t5h:O (3.3) BS02 rna N/A GO:0002181 ... P0C018 38185325
    878579 8t5h:P (3.3) BS01 rna N/A GO:0000027 ... P0A7K6 38185325
    878580 8t5h:P (3.3) BS02 rna N/A GO:0000027 ... P0A7K6 38185325
    878581 8t5h:Q (3.3) BS01 rna N/A GO:0000027 ... P0A7L3 38185325
    878582 8t5h:R (3.3) BS01 rna N/A GO:0002181 ... P0AG48 38185325
    878583 8t5h:S (3.3) BS01 rna N/A GO:0002181 ... P61175 38185325
    878584 8t5h:T (3.3) BS01 rna N/A GO:0000027 ... P0ADZ0 38185325
    878585 8t5h:U (3.3) BS01 rna N/A GO:0000027 ... P60624 38185325
    878586 8t5h:V (3.3) BS01 rna N/A GO:0000027 ... P68919 38185325
    878587 8t5h:W (3.3) BS01 rna N/A GO:0000027 ... P0A7L8 38185325
    878588 8t5h:W (3.3) BS02 rna N/A GO:0000027 ... P0A7L8 38185325
    878589 8t5h:X (3.3) BS01 rna N/A GO:0000027 ... P0A7M2 38185325
    878590 8t5h:Y (3.3) BS01 rna N/A GO:0000027 ... P0A7M6 38185325
    878591 8t5h:Z (3.3) BS01 rna N/A GO:0000027 ... P0AG51 38185325
    878592 8t5h:b (3.3) BS01 rna N/A N/A P0A7V3 38185325
    878593 8t5h:b (3.3) BS02 rna N/A N/A P0A7V3 38185325
    878594 8t5h:c (3.3) BS01 rna N/A GO:0000028 ... P0A7V8 38185325
    878595 8t5h:d (3.3) BS01 rna N/A GO:0000028 ... P0A7W1 38185325
    878596 8t5h:d (3.3) BS02 rna N/A GO:0000028 ... P0A7W1 38185325
    878597 8t5h:e (3.3) BS01 rna N/A N/A P02358 38185325
    878598 8t5h:f (3.3) BS01 rna N/A N/A P02359 38185325
    878599 8t5h:g (3.3) BS01 rna N/A GO:0000028 ... P0A7W7 38185325
    878600 8t5h:h (3.3) BS01 rna N/A GO:0000049 ... P0A7X3 38185325

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).