SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    878401 8sck:D (2.3) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878402 8scl:A (2.44) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878403 8scl:A (2.44) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878404 8scl:A (2.44) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878405 8scl:A (2.44) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878406 8scl:D (2.44) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878407 8scl:D (2.44) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878408 8scl:D (2.44) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878409 8scl:D (2.44) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878410 8scm:A (2.3) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878411 8scm:A (2.3) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878412 8scm:A (2.3) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878413 8scm:A (2.3) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878414 8scm:D (2.3) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878415 8scm:D (2.3) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878416 8scm:D (2.3) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878417 8scm:D (2.3) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878418 8scn:A (2.3) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878419 8scn:A (2.3) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878420 8scn:A (2.3) BS03 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878421 8scn:D (2.3) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878422 8scn:D (2.3) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878423 8scn:D (2.3) BS03 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878424 8sco:A (1.92) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878425 8sco:A (1.92) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878426 8sco:A (1.92) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878427 8sco:A (1.92) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878428 8sco:D (1.92) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878429 8sco:D (1.92) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878430 8sco:D (1.92) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878431 8sco:D (1.92) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878432 8scp:A (2.08) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878433 8scp:A (2.08) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878434 8scp:A (2.08) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878435 8scp:A (2.08) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878436 8scp:D (2.08) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878437 8scp:D (2.08) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878438 8scp:D (2.08) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878439 8scp:D (2.08) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878440 8scq:A (2.18) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878441 8scq:A (2.18) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878442 8scq:A (2.18) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878443 8scq:A (2.18) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878444 8scq:D (2.18) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878445 8scq:D (2.18) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878446 8scq:D (2.18) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878447 8scq:D (2.18) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878448 8scr:A (2.0) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878449 8scr:A (2.0) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878450 8scr:A (2.0) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878451 8scr:A (2.0) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878452 8scr:D (2.0) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878453 8scr:D (2.0) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878454 8scr:D (2.0) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878455 8scr:D (2.0) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878456 8scs:A (2.1) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878457 8scs:A (2.1) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878458 8scs:A (2.1) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878459 8scs:A (2.1) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878460 8scs:D (2.1) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878461 8scs:D (2.1) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878462 8scs:D (2.1) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878463 8scs:D (2.1) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878464 8sct:A (2.34) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878465 8sct:A (2.34) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878466 8sct:A (2.34) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878467 8sct:A (2.34) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878468 8sct:D (2.34) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878469 8sct:D (2.34) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878470 8sct:D (2.34) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878471 8sct:D (2.34) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878472 8scu:A (2.38) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878473 8scu:A (2.38) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878474 8scu:A (2.38) BS03 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878475 8scu:D (2.38) BS01 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878476 8scu:D (2.38) BS02 dna 2.7.7.7 GO:0003676 ... D9N168 37883544
    878477 8scu:D (2.38) BS03 DGT 2.7.7.7 GO:0003676 ... D9N168 37883544
    878478 8scu:D (2.38) BS04 CA 2.7.7.7 GO:0003676 ... D9N168 37883544
    878479 8scv:A (2.69) BS01 ZVG N/A GO:0000287 ... Q9NWZ3 N/A
    878480 8scv:B (2.69) BS01 ZVG N/A GO:0000287 ... Q9NWZ3 N/A
    878481 8scw:A (2.76) BS01 ZVA N/A GO:0000287 ... Q9NWZ3 N/A
    878482 8scw:B (2.76) BS01 ZVA N/A GO:0000287 ... Q9NWZ3 N/A
    878483 8scw:C (2.76) BS01 ZVA N/A GO:0000287 ... Q9NWZ3 N/A
    878484 8scw:D (2.76) BS01 ZVA N/A GO:0000287 ... Q9NWZ3 N/A
    878485 8scz:A (3.4) BS01 rna 3.6.4.13 GO:0002230 ... O95786 N/A
    878486 8scz:A (3.4) BS02 ZN 3.6.4.13 GO:0002230 ... O95786 N/A
    878487 8sd0:A (3.8) BS01 rna 3.6.4.13 GO:0002230 ... O95786 N/A
    878488 8sd0:A (3.8) BS02 ZN 3.6.4.13 GO:0002230 ... O95786 N/A
    878489 8sd1:A (1.298) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 38411550
    878490 8sd2:A (2.81) BS01 FIE ? GO:0019031 ... P03452 38753503
    878491 8sd2:B (2.81) BS01 FIE ? GO:0019031 ... P03452 38753503
    878492 8sd4:A (3.11) BS01 ZW4 ? GO:0019031 ... P03452 38753503
    878493 8sd4:B (3.11) BS01 ZW4 ? GO:0019031 ... P03452 38753503
    878494 8sd6:A (1.397) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 38411550
    878495 8sd7:A (1.704) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 38411550
    878496 8sd8:A (1.789) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 38411550
    878497 8sd9:A (1.904) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 38411550
    878498 8sdb:A (3.0) BS01 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878499 8sdb:A (3.0) BS02 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878500 8sdb:A (3.0) BS03 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878501 8sdb:A (3.0) BS04 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878502 8sdb:A (3.0) BS05 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878503 8sdb:A (3.0) BS06 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878504 8sdb:A (3.0) BS07 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878505 8sdb:A (3.0) BS08 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878506 8sdb:A (3.0) BS09 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878507 8sdb:B (3.0) BS01 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878508 8sdb:B (3.0) BS02 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878509 8sdb:B (3.0) BS03 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878510 8sdb:B (3.0) BS04 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878511 8sdb:B (3.0) BS05 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878512 8sdb:B (3.0) BS06 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878513 8sdb:C (3.0) BS01 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878514 8sdb:C (3.0) BS02 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878515 8sdb:C (3.0) BS03 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878516 8sdb:C (3.0) BS04 GLC 2.4.1.18 GO:0003824 ... P07762 37298853
    878517 8sdk:A (2.1) BS01 CA 3.4.21.64 GO:0004252 ... P06873 37223996
    878518 8sdo:A (2.01) BS01 peptide 3.6.1.- N/A Q6PL18 38733345
    878519 8sdq:A (1.85) BS01 peptide 3.6.1.- N/A Q6PL18 38733345
    878520 8sdr:A (1.35) BS01 CB4 3.5.2.6 GO:0008800 ... P24735 37850746
    878521 8sds:A (1.63) BS01 CB4 3.5.2.6 GO:0008800 ... P24735 37850746
    878522 8sdt:A (1.38) BS01 ZXM 3.5.2.6 GO:0008800 ... P24735 37850746
    878523 8sdv:A (1.42) BS01 ZXM 3.5.2.6 GO:0008800 ... P24735 37850746
    878524 8sdw:A (1.75) BS01 G3D 3.6.5.2 GO:0000139 ... P84077 38574162
    878525 8sdx:A (2.69) BS01 peptide ? N/A Q9ULI0 38733345
    878526 8sdx:B (2.69) BS01 peptide ? N/A Q9ULI0 38733345
    878527 8sdz:A (2.86) BS01 RTO ? GO:0005452 ... O35956 37845412
    878528 8se1:A (3.32) BS01 ZN N/A GO:0003682 ... P05771 N/A
    878529 8se1:A (3.32) BS02 ZN N/A GO:0003682 ... P05771 N/A
    878530 8se1:A (3.32) BS03 ZN N/A GO:0003682 ... P05771 N/A
    878531 8se1:A (3.32) BS04 ZN N/A GO:0003682 ... P05771 N/A
    878532 8se1:A (3.32) BS05 ZN N/A GO:0003682 ... P05771 N/A
    878533 8se1:A (3.32) BS06 ANP N/A GO:0003682 ... P05771 N/A
    878534 8se1:A (3.32) BS07 MG N/A GO:0003682 ... P05771 N/A
    878535 8se1:A (3.32) BS08 MG N/A GO:0003682 ... P05771 N/A
    878536 8se1:B (3.32) BS01 ZN N/A GO:0003682 ... P05771 N/A
    878537 8se1:B (3.32) BS02 ZN N/A GO:0003682 ... P05771 N/A
    878538 8se1:B (3.32) BS03 ZN N/A GO:0003682 ... P05771 N/A
    878539 8se1:B (3.32) BS04 ZN N/A GO:0003682 ... P05771 N/A
    878540 8se1:B (3.32) BS05 ZN N/A GO:0003682 ... P05771 N/A
    878541 8se1:B (3.32) BS06 ANP N/A GO:0003682 ... P05771 N/A
    878542 8se1:B (3.32) BS07 MG N/A GO:0003682 ... P05771 N/A
    878543 8se1:B (3.32) BS08 MG N/A GO:0003682 ... P05771 N/A
    878544 8se2:A (2.95) BS01 ZN N/A GO:0003682 ... P05771 N/A
    878545 8se2:A (2.95) BS02 ZN N/A GO:0003682 ... P05771 N/A
    878546 8se2:A (2.95) BS03 ZN N/A GO:0003682 ... P05771 N/A
    878547 8se2:A (2.95) BS04 ZN N/A GO:0003682 ... P05771 N/A
    878548 8se2:B (2.95) BS01 ANP N/A GO:0003682 ... P05771 N/A
    878549 8se2:B (2.95) BS02 MN N/A GO:0003682 ... P05771 N/A
    878550 8se2:B (2.95) BS03 ZN N/A GO:0003682 ... P05771 N/A
    878551 8se2:B (2.95) BS04 ZN N/A GO:0003682 ... P05771 N/A
    878552 8se2:B (2.95) BS05 ZN N/A GO:0003682 ... P05771 N/A
    878553 8se2:B (2.95) BS06 ZN N/A GO:0003682 ... P05771 N/A
    878554 8se2:B (2.95) BS07 CA N/A GO:0003682 ... P05771 N/A
    878555 8se3:A (2.6) BS01 ZN N/A GO:0003682 ... P05771 N/A
    878556 8se3:A (2.6) BS02 ZN N/A GO:0003682 ... P05771 N/A
    878557 8se3:A (2.6) BS03 ZN N/A GO:0003682 ... P05771 N/A
    878558 8se3:A (2.6) BS04 ZN N/A GO:0003682 ... P05771 N/A
    878559 8se4:A (2.68) BS01 ZN N/A GO:0003682 ... P05771 N/A
    878560 8se4:A (2.68) BS02 ZN N/A GO:0003682 ... P05771 N/A
    878561 8se4:A (2.68) BS03 ZN N/A GO:0003682 ... P05771 N/A
    878562 8se4:A (2.68) BS04 ZN N/A GO:0003682 ... P05771 N/A
    878563 8se4:B (2.68) BS01 ADN N/A GO:0003682 ... P05771 N/A
    878564 8se4:B (2.68) BS02 ZN N/A GO:0003682 ... P05771 N/A
    878565 8se4:B (2.68) BS03 ZN N/A GO:0003682 ... P05771 N/A
    878566 8se4:B (2.68) BS04 ZN N/A GO:0003682 ... P05771 N/A
    878567 8se4:B (2.68) BS05 ZN N/A GO:0003682 ... P05771 N/A
    878568 8se5:A (1.43) BS01 ZW7 ? GO:0045954 ... P26718 37778428
    878569 8se5:B (1.43) BS01 ZW7 ? GO:0045954 ... P26718 37778428
    878570 8se6:A (1.36) BS01 ZWA ? GO:0045954 ... P26718 37778428
    878571 8se6:B (1.36) BS01 ZWA ? GO:0045954 ... P26718 37778428
    878572 8se7:Q (2.96) BS01 peptide N/A GO:0004252 ... Q92743 38777835
    878573 8se9:A (3.2) BS01 AMP 6.2.1.- GO:0005515 ... P41226 37553340
    878574 8sea:A (3.4) BS01 AMP 6.2.1.- GO:0005515 ... P41226 37553340
    878575 8seb:A (3.24) BS01 AMP 6.2.1.- GO:0005515 ... P41226 37553340
    878576 8sen:A (3.49) BS01 ZN ? GO:0003151 ... P11716 37192614
    878577 8sen:B (3.49) BS01 ZN ? GO:0003151 ... P11716 37192614
    878578 8sen:C (3.49) BS01 ZN ? GO:0003151 ... P11716 37192614
    878579 8sen:D (3.49) BS01 ZN ? GO:0003151 ... P11716 37192614
    878580 8seo:A (3.92) BS01 AGS ? GO:0003151 ... P11716 37192614
    878581 8seo:A (3.92) BS02 ZN ? GO:0003151 ... P11716 37192614
    878582 8seo:B (3.92) BS01 AGS ? GO:0003151 ... P11716 37192614
    878583 8seo:B (3.92) BS02 ZN ? GO:0003151 ... P11716 37192614
    878584 8seo:C (3.92) BS01 AGS ? GO:0003151 ... P11716 37192614
    878585 8seo:C (3.92) BS02 ZN ? GO:0003151 ... P11716 37192614
    878586 8seo:D (3.92) BS01 AGS ? GO:0003151 ... P11716 37192614
    878587 8seo:D (3.92) BS02 ZN ? GO:0003151 ... P11716 37192614
    878588 8sep:A (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    878589 8sep:A (3.57) BS02 ZN ? GO:0003151 ... P11716 37192614
    878590 8sep:B (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    878591 8sep:B (3.57) BS02 ZN ? GO:0003151 ... P11716 37192614
    878592 8sep:C (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    878593 8sep:C (3.57) BS02 ZN ? GO:0003151 ... P11716 37192614
    878594 8sep:D (3.57) BS01 ADP ? GO:0003151 ... P11716 37192614
    878595 8sep:D (3.57) BS02 ZN ? GO:0003151 ... P11716 37192614
    878596 8seq:A (3.4) BS01 AMP ? GO:0003151 ... P11716 37192614
    878597 8seq:A (3.4) BS02 ZN ? GO:0003151 ... P11716 37192614
    878598 8seq:B (3.4) BS01 AMP ? GO:0003151 ... P11716 37192614
    878599 8seq:B (3.4) BS02 ZN ? GO:0003151 ... P11716 37192614
    878600 8seq:C (3.4) BS01 AMP ? GO:0003151 ... P11716 37192614

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).