SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    878801 8t7n:A (2.26) BS01 NAP N/A GO:0000287 ... O75874 N/A
    878802 8t7n:A (2.26) BS02 ZT3 N/A GO:0000287 ... O75874 N/A
    878803 8t7n:B (2.26) BS01 NAP N/A GO:0000287 ... O75874 N/A
    878804 8t7n:B (2.26) BS02 ZT3 N/A GO:0000287 ... O75874 N/A
    878805 8t7o:A (2.053) BS01 NAP N/A GO:0000287 ... O75874 N/A
    878806 8t7o:A (2.053) BS02 IV3 N/A GO:0000287 ... O75874 N/A
    878807 8t7o:B (2.053) BS01 IV3 N/A GO:0000287 ... O75874 N/A
    878808 8t7o:B (2.053) BS02 NAP N/A GO:0000287 ... O75874 N/A
    878809 8t7p:A (2.0) BS01 ZN N/A GO:0006508 ... O96935 N/A
    878810 8t7q:A (2.1) BS01 ZH5 3.1.3.48 GO:0004725 ... Q06124 37774359
    878811 8t7q:B (2.1) BS01 ZH5 3.1.3.48 GO:0004725 ... Q06124 37774359
    878812 8t7r:C (3.84) BS01 peptide N/A N/A F6IQR9 N/A
    878813 8t7r:G (3.84) BS01 peptide N/A N/A F6IQR9 N/A
    878814 8t7r:K (3.84) BS01 peptide N/A N/A F6IQR9 N/A
    878815 8t7r:O (3.84) BS01 peptide N/A N/A F6IQR9 N/A
    878816 8t7r:S (3.84) BS01 peptide N/A N/A F6IQR9 N/A
    878817 8t7r:W (3.84) BS01 peptide N/A N/A F6IQR9 N/A
    878818 8t7r:a (3.84) BS01 peptide N/A N/A F6IQR9 N/A
    878819 8t7r:e (3.84) BS01 peptide N/A N/A F6IQR9 N/A
    878820 8t7r:i (3.84) BS01 peptide N/A N/A F6IQR9 N/A
    878821 8t7s:A (3.01) BS01 rna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    878822 8t7s:A (3.01) BS02 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    878823 8t7s:A (3.01) BS03 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    878824 8t7s:A (3.01) BS04 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    878825 8t7s:A (3.01) BS05 MG 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    878826 8t7s:A (3.01) BS06 MG 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    878827 8t7s:A (3.01) BS07 MG 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    878828 8t7s:G (3.01) BS01 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    878829 8t7s:G (3.01) BS02 rna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    878830 8t7s:G (3.01) BS03 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    878831 8t7u:A (3.74) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    878832 8t7u:B (3.74) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    878833 8t7u:C (3.74) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    878834 8t7u:D (3.74) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    878835 8t7u:E (3.74) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    878836 8t7u:F (3.74) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    878837 8t7u:G (3.74) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    878838 8t7v:A (2.25) BS01 ZTA ? GO:0005856 ... O00522 37974623
    878839 8t7v:B (2.25) BS01 MG 3.6.5.2 GO:0003924 ... P61224 37974623
    878840 8t7v:B (2.25) BS02 GNP 3.6.5.2 GO:0003924 ... P61224 37974623
    878841 8t7y:A (1.78) BS01 peptide N/A GO:0008233 ... P0DTD1 N/A
    878842 8t7y:B (1.78) BS01 peptide N/A GO:0008233 ... P0DTD1 N/A
    878843 8t81:A (2.6) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 38190441
    878844 8t81:A (2.6) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 38190441
    878845 8t81:A (2.6) BS03 IJM 3.1.-.- GO:0003723 ... C3W5S0 38190441
    878846 8t83:A (2.0) BS01 ZN N/A GO:0006508 ... O96935 N/A
    878847 8t85:A (2.38) BS01 MG ? GO:0000156 ... P0AEV1 37949227
    878848 8t85:A (2.38) BS02 BEF ? GO:0000156 ... P0AEV1 37949227
    878849 8t88:A (1.54) BS01 YW0 3.-.-.- GO:0016020 ... Q2FDS6 38411555
    878850 8t88:A (1.54) BS02 YW0 3.-.-.- GO:0016020 ... Q2FDS6 38411555
    878851 8t88:B (1.54) BS01 YW0 3.-.-.- GO:0016020 ... Q2FDS6 38411555
    878852 8t88:B (1.54) BS02 YW0 3.-.-.- GO:0016020 ... Q2FDS6 38411555
    878853 8t8a:A (3.4) BS01 FAD N/A GO:0000166 ... A0A177SH44 39420599
    878854 8t8a:B (3.4) BS01 FAD N/A GO:0000166 ... A0A177SH44 39420599
    878855 8t8a:C (3.4) BS01 FAD N/A GO:0000166 ... A0A177SH44 39420599
    878856 8t8a:D (3.4) BS01 FAD N/A GO:0000166 ... A0A177SH44 39420599
    878857 8t8b:10 (2.65) BS01 rna ? GO:0003735 ... P60493 37433044
    878858 8t8b:10 (2.65) BS02 rna ? GO:0003735 ... P60493 37433044
    878859 8t8b:10 (2.65) BS03 MG ? GO:0003735 ... P60493 37433044
    878860 8t8b:10 (2.65) BS04 MG ? GO:0003735 ... P60493 37433044
    878861 8t8b:10 (2.65) BS05 MG ? GO:0003735 ... P60493 37433044
    878862 8t8b:10 (2.65) BS06 MG ? GO:0003735 ... P60493 37433044
    878863 8t8b:11 (2.65) BS01 rna ? GO:0003735 ... P60494 37433044
    878864 8t8b:11 (2.65) BS02 MG ? GO:0003735 ... P60494 37433044
    878865 8t8b:12 (2.65) BS01 rna ? GO:0003735 ... Q5SHP6 37433044
    878866 8t8b:13 (2.65) BS01 rna ? GO:0003735 ... Q5SHQ6 37433044
    878867 8t8b:13 (2.65) BS02 rna ? GO:0003735 ... Q5SHQ6 37433044
    878868 8t8b:13 (2.65) BS03 MG ? GO:0003735 ... Q5SHQ6 37433044
    878869 8t8b:13 (2.65) BS04 MG ? GO:0003735 ... Q5SHQ6 37433044
    878870 8t8b:14 (2.65) BS01 rna ? GO:0003735 ... Q5SJE1 37433044
    878871 8t8b:14 (2.65) BS02 ZN ? GO:0003735 ... Q5SJE1 37433044
    878872 8t8b:15 (2.65) BS01 rna ? GO:0003735 ... P80339 37433044
    878873 8t8b:15 (2.65) BS02 MG ? GO:0003735 ... P80339 37433044
    878874 8t8b:15 (2.65) BS03 MG ? GO:0003735 ... P80339 37433044
    878875 8t8b:15 (2.65) BS04 MG ? GO:0003735 ... P80339 37433044
    878876 8t8b:15 (2.65) BS05 MG ? GO:0003735 ... P80339 37433044
    878877 8t8b:15 (2.65) BS06 ZN ? GO:0003735 ... P80339 37433044
    878878 8t8b:16 (2.65) BS01 rna ? GO:0000049 ... P35871 37433044
    878879 8t8b:16 (2.65) BS02 ZN ? GO:0000049 ... P35871 37433044
    878880 8t8b:17 (2.65) BS01 rna ? GO:0003735 ... P80340 37433044
    878881 8t8b:17 (2.65) BS02 MG ? GO:0003735 ... P80340 37433044
    878882 8t8b:17 (2.65) BS03 MG ? GO:0003735 ... P80340 37433044
    878883 8t8b:18 (2.65) BS01 rna ? GO:0003735 ... Q5SKU1 37433044
    878884 8t8b:18 (2.65) BS02 MG ? GO:0003735 ... Q5SKU1 37433044
    878885 8t8b:18 (2.65) BS03 MG ? GO:0003735 ... Q5SKU1 37433044
    878886 8t8b:18 (2.65) BS04 MG ? GO:0003735 ... Q5SKU1 37433044
    878887 8t8b:19 (2.65) BS01 rna ? GO:0003735 ... Q5SHR2 37433044
    878888 8t8b:19 (2.65) BS02 ZN ? GO:0003735 ... Q5SHR2 37433044
    878889 8t8b:1D (2.65) BS01 rna ? GO:0002181 ... P60405 37433044
    878890 8t8b:1D (2.65) BS02 rna ? GO:0002181 ... P60405 37433044
    878891 8t8b:1D (2.65) BS03 MG ? GO:0002181 ... P60405 37433044
    878892 8t8b:1D (2.65) BS04 MG ? GO:0002181 ... P60405 37433044
    878893 8t8b:1D (2.65) BS05 MG ? GO:0002181 ... P60405 37433044
    878894 8t8b:1D (2.65) BS06 MG ? GO:0002181 ... P60405 37433044
    878895 8t8b:1D (2.65) BS07 MG ? GO:0002181 ... P60405 37433044
    878896 8t8b:1D (2.65) BS08 MG ? GO:0002181 ... P60405 37433044
    878897 8t8b:1D (2.65) BS09 MG ? GO:0002181 ... P60405 37433044
    878898 8t8b:1D (2.65) BS10 MG ? GO:0002181 ... P60405 37433044
    878899 8t8b:1D (2.65) BS11 MG ? GO:0002181 ... P60405 37433044
    878900 8t8b:1D (2.65) BS12 MG ? GO:0002181 ... P60405 37433044
    878901 8t8b:1E (2.65) BS01 rna ? GO:0003735 ... Q5SHN8 37433044
    878902 8t8b:1E (2.65) BS02 MG ? GO:0003735 ... Q5SHN8 37433044
    878903 8t8b:1E (2.65) BS03 MG ? GO:0003735 ... Q5SHN8 37433044
    878904 8t8b:1E (2.65) BS04 MG ? GO:0003735 ... Q5SHN8 37433044
    878905 8t8b:1E (2.65) BS05 MG ? GO:0003735 ... Q5SHN8 37433044
    878906 8t8b:1F (2.65) BS01 rna ? GO:0003735 ... Q5SHN9 37433044
    878907 8t8b:1F (2.65) BS02 MG ? GO:0003735 ... Q5SHN9 37433044
    878908 8t8b:1F (2.65) BS03 MG ? GO:0003735 ... Q5SHN9 37433044
    878909 8t8b:1F (2.65) BS04 MG ? GO:0003735 ... Q5SHN9 37433044
    878910 8t8b:1F (2.65) BS05 MG ? GO:0003735 ... Q5SHN9 37433044
    878911 8t8b:1F (2.65) BS06 MG ? GO:0003735 ... Q5SHN9 37433044
    878912 8t8b:1F (2.65) BS07 MG ? GO:0003735 ... Q5SHN9 37433044
    878913 8t8b:1F (2.65) BS08 MG ? GO:0003735 ... Q5SHN9 37433044
    878914 8t8b:1F (2.65) BS09 MG ? GO:0003735 ... Q5SHN9 37433044
    878915 8t8b:1F (2.65) BS10 MG ? GO:0003735 ... Q5SHN9 37433044
    878916 8t8b:1F (2.65) BS11 MG ? GO:0003735 ... Q5SHN9 37433044
    878917 8t8b:1F (2.65) BS12 ARG ? GO:0003735 ... Q5SHN9 37433044
    878918 8t8b:1G (2.65) BS01 rna ? GO:0000049 ... Q5SHQ0 37433044
    878919 8t8b:1G (2.65) BS02 rna ? GO:0000049 ... Q5SHQ0 37433044
    878920 8t8b:1G (2.65) BS03 MG ? GO:0000049 ... Q5SHQ0 37433044
    878921 8t8b:1H (2.65) BS01 rna ? GO:0002181 ... P0DOY8 37433044
    878922 8t8b:1I (2.65) BS01 rna ? GO:0003735 ... Q5SLQ1 37433044
    878923 8t8b:1N (2.65) BS01 rna ? GO:0003729 ... P60488 37433044
    878924 8t8b:1N (2.65) BS02 MG ? GO:0003729 ... P60488 37433044
    878925 8t8b:1N (2.65) BS03 MG ? GO:0003729 ... P60488 37433044
    878926 8t8b:1O (2.65) BS01 rna ? GO:0003735 ... Q5SHP8 37433044
    878927 8t8b:1O (2.65) BS02 rna ? GO:0003735 ... Q5SHP8 37433044
    878928 8t8b:1P (2.65) BS01 rna ? GO:0003735 ... Q5SHQ7 37433044
    878929 8t8b:1P (2.65) BS02 MG ? GO:0003735 ... Q5SHQ7 37433044
    878930 8t8b:1Q (2.65) BS01 rna ? GO:0000049 ... P60489 37433044
    878931 8t8b:1Q (2.65) BS02 rna ? GO:0000049 ... P60489 37433044
    878932 8t8b:1Q (2.65) BS03 MG ? GO:0000049 ... P60489 37433044
    878933 8t8b:1Q (2.65) BS04 MG ? GO:0000049 ... P60489 37433044
    878934 8t8b:1Q (2.65) BS05 MG ? GO:0000049 ... P60489 37433044
    878935 8t8b:1Q (2.65) BS06 MG ? GO:0000049 ... P60489 37433044
    878936 8t8b:1R (2.65) BS01 rna ? GO:0003735 ... Q9Z9H5 37433044
    878937 8t8b:1R (2.65) BS02 MG ? GO:0003735 ... Q9Z9H5 37433044
    878938 8t8b:1R (2.65) BS03 MG ? GO:0003735 ... Q9Z9H5 37433044
    878939 8t8b:1R (2.65) BS04 MG ? GO:0003735 ... Q9Z9H5 37433044
    878940 8t8b:1S (2.65) BS01 rna ? GO:0003735 ... Q5SHQ4 37433044
    878941 8t8b:1S (2.65) BS02 rna ? GO:0003735 ... Q5SHQ4 37433044
    878942 8t8b:1T (2.65) BS01 rna ? GO:0003735 ... P60490 37433044
    878943 8t8b:1T (2.65) BS02 rna ? GO:0003735 ... P60490 37433044
    878944 8t8b:1U (2.65) BS01 rna ? GO:0000027 ... P60491 37433044
    878945 8t8b:1U (2.65) BS02 MG ? GO:0000027 ... P60491 37433044
    878946 8t8b:1U (2.65) BS03 MG ? GO:0000027 ... P60491 37433044
    878947 8t8b:1U (2.65) BS04 MG ? GO:0000027 ... P60491 37433044
    878948 8t8b:1U (2.65) BS05 MG ? GO:0000027 ... P60491 37433044
    878949 8t8b:1U (2.65) BS06 MG ? GO:0000027 ... P60491 37433044
    878950 8t8b:1V (2.65) BS01 rna ? GO:0003723 ... P60492 37433044
    878951 8t8b:1V (2.65) BS02 MG ? GO:0003723 ... P60492 37433044
    878952 8t8b:1V (2.65) BS03 MG ? GO:0003723 ... P60492 37433044
    878953 8t8b:1V (2.65) BS04 MG ? GO:0003723 ... P60492 37433044
    878954 8t8b:1V (2.65) BS05 MG ? GO:0003723 ... P60492 37433044
    878955 8t8b:1W (2.65) BS01 rna ? GO:0003735 ... Q5SHP3 37433044
    878956 8t8b:1W (2.65) BS02 MG ? GO:0003735 ... Q5SHP3 37433044
    878957 8t8b:1W (2.65) BS03 MG ? GO:0003735 ... Q5SHP3 37433044
    878958 8t8b:1X (2.65) BS01 rna ? GO:0003735 ... Q5SHP0 37433044
    878959 8t8b:1X (2.65) BS02 MG ? GO:0003735 ... Q5SHP0 37433044
    878960 8t8b:1Y (2.65) BS01 rna ? GO:0003723 ... Q5SHP9 37433044
    878961 8t8b:1Y (2.65) BS02 ZN ? GO:0003723 ... Q5SHP9 37433044
    878962 8t8b:1Z (2.65) BS01 rna ? GO:0003723 ... Q5SHZ1 37433044
    878963 8t8b:1Z (2.65) BS02 rna ? GO:0003723 ... Q5SHZ1 37433044
    878964 8t8b:1b (2.65) BS01 rna ? GO:0003735 ... P80371 37433044
    878965 8t8b:1b (2.65) BS02 MG ? GO:0003735 ... P80371 37433044
    878966 8t8b:1c (2.65) BS01 rna ? GO:0003676 ... P80372 37433044
    878967 8t8b:1d (2.65) BS01 rna ? GO:0003723 ... P80373 37433044
    878968 8t8b:1d (2.65) BS02 MG ? GO:0003723 ... P80373 37433044
    878969 8t8b:1d (2.65) BS03 SF4 ? GO:0003723 ... P80373 37433044
    878970 8t8b:1e (2.65) BS01 rna ? GO:0003723 ... Q5SHQ5 37433044
    878971 8t8b:1e (2.65) BS02 MG ? GO:0003723 ... Q5SHQ5 37433044
    878972 8t8b:1f (2.65) BS01 rna ? GO:0003735 ... Q5SLP8 37433044
    878973 8t8b:1g (2.65) BS01 rna ? GO:0000049 ... P17291 37433044
    878974 8t8b:1h (2.65) BS01 rna ? GO:0003735 ... P0DOY9 37433044
    878975 8t8b:1i (2.65) BS01 rna ? GO:0000049 ... P80374 37433044
    878976 8t8b:1j (2.65) BS01 rna ? GO:0000049 ... Q5SHN7 37433044
    878977 8t8b:1k (2.65) BS01 rna ? GO:0003735 ... P80376 37433044
    878978 8t8b:1k (2.65) BS02 MG ? GO:0003735 ... P80376 37433044
    878979 8t8b:1l (2.65) BS01 rna ? GO:0000049 ... Q5SHN3 37433044
    878980 8t8b:1l (2.65) BS02 MG ? GO:0000049 ... Q5SHN3 37433044
    878981 8t8b:1m (2.65) BS01 rna ? GO:0000049 ... P80377 37433044
    878982 8t8b:1m (2.65) BS02 rna ? GO:0000049 ... P80377 37433044
    878983 8t8b:1m (2.65) BS03 MG ? GO:0000049 ... P80377 37433044
    878984 8t8b:1n (2.65) BS01 rna ? GO:0003735 ... P0DOY6 37433044
    878985 8t8b:1n (2.65) BS02 MG ? GO:0003735 ... P0DOY6 37433044
    878986 8t8b:1n (2.65) BS03 ZN ? GO:0003735 ... P0DOY6 37433044
    878987 8t8b:1o (2.65) BS01 rna ? GO:0003735 ... Q5SJ76 37433044
    878988 8t8b:1o (2.65) BS02 rna ? GO:0003735 ... Q5SJ76 37433044
    878989 8t8b:1p (2.65) BS01 rna ? GO:0003735 ... Q5SJH3 37433044
    878990 8t8b:1q (2.65) BS01 rna ? GO:0003735 ... P0DOY7 37433044
    878991 8t8b:1r (2.65) BS01 rna ? GO:0003735 ... Q5SLQ0 37433044
    878992 8t8b:1s (2.65) BS01 rna ? GO:0000028 ... Q5SHP2 37433044
    878993 8t8b:1t (2.65) BS01 rna ? GO:0003723 ... P80380 37433044
    878994 8t8b:1t (2.65) BS02 MG ? GO:0003723 ... P80380 37433044
    878995 8t8b:1y (2.65) BS01 rna ? GO:0005515 ... P0AD49 37433044
    878996 8t8b:1y (2.65) BS02 MG ? GO:0005515 ... P0AD49 37433044
    878997 8t8b:20 (2.65) BS01 rna ? GO:0003735 ... P60493 37433044
    878998 8t8b:20 (2.65) BS02 rna ? GO:0003735 ... P60493 37433044
    878999 8t8b:20 (2.65) BS03 MG ? GO:0003735 ... P60493 37433044
    879000 8t8b:21 (2.65) BS01 rna ? GO:0003735 ... P60494 37433044

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).