SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    879401 8t9g:V (6.2) BS01 dna N/A GO:0000786 ... P02281 39303719
    879402 8t9g:V (6.2) BS02 dna N/A GO:0000786 ... P02281 39303719
    879403 8t9g:W (6.2) BS01 dna N/A GO:0000786 ... P84233 39303719
    879404 8t9g:W (6.2) BS02 dna N/A GO:0000786 ... P84233 39303719
    879405 8t9g:X (6.2) BS01 dna N/A GO:0000786 ... P62799 39303719
    879406 8t9g:X (6.2) BS02 dna N/A GO:0000786 ... P62799 39303719
    879407 8t9h:A (3.37) BS01 dna ? GO:0000786 ... P84233 37595555
    879408 8t9h:A (3.37) BS02 dna ? GO:0000786 ... P84233 37595555
    879409 8t9h:B (3.37) BS01 dna ? GO:0000786 ... P62799 37595555
    879410 8t9h:B (3.37) BS02 dna ? GO:0000786 ... P62799 37595555
    879411 8t9h:C (3.37) BS01 dna ? GO:0000786 ... P06897 37595555
    879412 8t9h:C (3.37) BS02 dna ? GO:0000786 ... P06897 37595555
    879413 8t9h:D (3.37) BS01 dna ? GO:0000786 ... P02281 37595555
    879414 8t9h:E (3.37) BS01 dna ? GO:0000786 ... P84233 37595555
    879415 8t9h:E (3.37) BS02 dna ? GO:0000786 ... P84233 37595555
    879416 8t9h:F (3.37) BS01 dna ? GO:0000786 ... P62799 37595555
    879417 8t9h:F (3.37) BS02 dna ? GO:0000786 ... P62799 37595555
    879418 8t9h:G (3.37) BS01 dna ? GO:0000786 ... P06897 37595555
    879419 8t9h:H (3.37) BS01 dna ? GO:0000786 ... P02281 37595555
    879420 8t9u:F (1.47) BS01 dna ? GO:0003700 ... P17947 38042148
    879421 8t9u:F (1.47) BS02 dna ? GO:0003700 ... P17947 38042148
    879422 8t9v:A (1.945) BS01 ZJT 3.2.2.22 GO:0017148 ... P02879 38340640
    879423 8t9x:A (2.0) BS01 dna ? GO:0005198 ... A0AA49QGS8 N/A
    879424 8t9x:A (2.0) BS02 dna ? GO:0005198 ... A0AA49QGS8 N/A
    879425 8ta0:A (1.95) BS01 DQI N/A GO:0000166 ... A0PQG8 39468773
    879426 8ta0:A (1.95) BS02 NAP N/A GO:0000166 ... A0PQG8 39468773
    879427 8ta1:A (1.5) BS01 EII N/A GO:0000166 ... A0PQG8 39468773
    879428 8ta1:A (1.5) BS02 NAP N/A GO:0000166 ... A0PQG8 39468773
    879429 8ta2:A (2.74) BS01 GH6 ? GO:0005247 ... P51788 38345841
    879430 8ta2:A (2.74) BS02 CL ? GO:0005247 ... P51788 38345841
    879431 8ta2:B (2.74) BS01 GH6 ? GO:0005247 ... P51788 38345841
    879432 8ta2:B (2.74) BS02 CL ? GO:0005247 ... P51788 38345841
    879433 8tab:A (2.26) BS01 U4T 3.2.2.22 GO:0017148 ... P02879 38340640
    879434 8tac:B (2.34) BS01 dna N/A GO:0003677 ... N/A N/A
    879435 8tac:B (2.34) BS02 dna N/A GO:0003677 ... N/A N/A
    879436 8tad:A (2.76) BS01 ZXJ 3.2.2.22 GO:0017148 ... P02879 38340640
    879437 8taf:J (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    879438 8taf:L (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    879439 8taf:M (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    879440 8taf:N (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    879441 8taf:O (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    879442 8taf:P (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    879443 8taf:Q (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    879444 8taf:R (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    879445 8tag:A (3.2) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    879446 8tag:B (3.2) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    879447 8tag:B (3.2) BS02 CA ? GO:0002407 ... Q6P9J9 37573365
    879448 8tah:A (2.89) BS01 peptide ? GO:0003779 ... P61157 37898612
    879449 8tah:A (2.89) BS02 ATP ? GO:0003779 ... P61157 37898612
    879450 8tah:B (2.89) BS01 ATP ? GO:0003779 ... A7MB62 37898612
    879451 8tai:A (3.1) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    879452 8tai:B (3.1) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    879453 8tai:B (3.1) BS02 CA ? GO:0002407 ... Q6P9J9 37573365
    879454 8tal:A (3.2) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    879455 8tal:B (3.2) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    879456 8tal:B (3.2) BS02 CA ? GO:0002407 ... Q6P9J9 37573365
    879457 8tao:A (2.9) BS01 QUS ? GO:0004930 ... P41594 38632403
    879458 8tao:B (2.9) BS01 YKU ? GO:0004930 ... P41594 38632403
    879459 8tao:B (2.9) BS02 QUS ? GO:0004930 ... P41594 38632403
    879460 8tas:E (4.1) BS01 dna N/A GO:0006338 ... Q15910 39303719
    879461 8tas:E (4.1) BS02 SAH N/A GO:0006338 ... Q15910 39303719
    879462 8tas:I (4.1) BS01 dna N/A GO:0000786 ... P84233 39303719
    879463 8tas:I (4.1) BS02 dna N/A GO:0000786 ... P84233 39303719
    879464 8tas:J (4.1) BS01 dna N/A GO:0000786 ... P62799 39303719
    879465 8tas:J (4.1) BS02 dna N/A GO:0000786 ... P62799 39303719
    879466 8tas:R (4.1) BS01 dna N/A GO:0000786 ... P06897 39303719
    879467 8tas:R (4.1) BS02 dna N/A GO:0000786 ... P06897 39303719
    879468 8tas:S (4.1) BS01 dna N/A GO:0000786 ... P02281 39303719
    879469 8tas:S (4.1) BS02 dna N/A GO:0000786 ... P02281 39303719
    879470 8tas:U (4.1) BS01 dna N/A GO:0000786 ... P06897 39303719
    879471 8tas:U (4.1) BS02 dna N/A GO:0000786 ... P06897 39303719
    879472 8tas:V (4.1) BS01 dna N/A GO:0000786 ... P02281 39303719
    879473 8tas:V (4.1) BS02 dna N/A GO:0000786 ... P02281 39303719
    879474 8tas:W (4.1) BS01 dna N/A GO:0000786 ... P84233 39303719
    879475 8tas:W (4.1) BS02 dna N/A GO:0000786 ... P84233 39303719
    879476 8tas:X (4.1) BS01 dna N/A GO:0000786 ... P62799 39303719
    879477 8tas:X (4.1) BS02 dna N/A GO:0000786 ... P62799 39303719
    879478 8tat:A (1.6) BS01 GFX 3.2.1.17 GO:0003796 ... A0A7S9SVX7 38357006
    879479 8tat:A (1.6) BS02 GFX 3.2.1.17 GO:0003796 ... A0A7S9SVX7 38357006
    879480 8tav:A (1.39) BS01 ZKR N/A GO:0016020 ... Q2G025 N/A
    879481 8tav:A (1.39) BS02 ZKR N/A GO:0016020 ... Q2G025 N/A
    879482 8tav:A (1.39) BS03 ZKR N/A GO:0016020 ... Q2G025 N/A
    879483 8tav:A (1.39) BS04 CA N/A GO:0016020 ... Q2G025 N/A
    879484 8tav:A (1.39) BS05 CA N/A GO:0016020 ... Q2G025 N/A
    879485 8taw:A (1.73) BS01 HEM ? GO:0004497 ... Q2IU02 37837941
    879486 8taw:A (1.73) BS02 PQS ? GO:0004497 ... Q2IU02 37837941
    879487 8tay:A (2.021) BS01 EJD ? GO:0004497 ... Q2IU02 37837941
    879488 8tay:A (2.021) BS02 HEM ? GO:0004497 ... Q2IU02 37837941
    879489 8tb2:A (1.88) BS01 CA ? N/A Q8NUV0 38568806
    879490 8tb5:A (2.32) BS01 ZOQ 2.7.10.2 GO:0004672 ... P29597 37823891
    879491 8tb5:B (2.32) BS01 ZOQ 2.7.10.2 GO:0004672 ... P29597 37823891
    879492 8tb6:A (1.96) BS01 ZOI 2.7.10.2 GO:0004672 ... P29597 37823891
    879493 8tb6:B (1.96) BS01 ZOI 2.7.10.2 GO:0004672 ... P29597 37823891
    879494 8tb7:R (2.94) BS01 ZOB ? GO:0004930 ... P0ABE7
    Q9BZJ8
    37741852
    879495 8tb9:A (4.0) BS01 dna N/A GO:0000785 ... P07305 39303719
    879496 8tb9:A (4.0) BS02 dna N/A GO:0000785 ... P07305 39303719
    879497 8tb9:D (4.0) BS01 peptide N/A N/A Q15022 39303719
    879498 8tb9:E (4.0) BS01 dna N/A GO:0006338 ... Q15910 39303719
    879499 8tb9:E (4.0) BS02 SAH N/A GO:0006338 ... Q15910 39303719
    879500 8tb9:I (4.0) BS01 dna N/A GO:0000786 ... P84233 39303719
    879501 8tb9:I (4.0) BS02 dna N/A GO:0000786 ... P84233 39303719
    879502 8tb9:J (4.0) BS01 dna N/A GO:0000786 ... P62799 39303719
    879503 8tb9:R (4.0) BS01 dna N/A GO:0000786 ... P06897 39303719
    879504 8tb9:R (4.0) BS02 dna N/A GO:0000786 ... P06897 39303719
    879505 8tb9:S (4.0) BS01 dna N/A GO:0000786 ... P02281 39303719
    879506 8tb9:S (4.0) BS02 dna N/A GO:0000786 ... P02281 39303719
    879507 8tb9:U (4.0) BS01 dna N/A GO:0000786 ... P06897 39303719
    879508 8tb9:U (4.0) BS02 dna N/A GO:0000786 ... P06897 39303719
    879509 8tb9:V (4.0) BS01 dna N/A GO:0000786 ... P02281 39303719
    879510 8tb9:V (4.0) BS02 dna N/A GO:0000786 ... P02281 39303719
    879511 8tb9:W (4.0) BS01 dna N/A GO:0000786 ... P84233 39303719
    879512 8tb9:W (4.0) BS02 dna N/A GO:0000786 ... P84233 39303719
    879513 8tb9:X (4.0) BS01 dna N/A GO:0000786 ... P62799 39303719
    879514 8tb9:X (4.0) BS02 dna N/A GO:0000786 ... P62799 39303719
    879515 8tba:A (1.65) BS01 ZMX N/A GO:0008360 ... Q9ZLT0 N/A
    879516 8tba:A (1.65) BS02 DGL N/A GO:0008360 ... Q9ZLT0 N/A
    879517 8tba:B (1.65) BS01 DGL N/A GO:0008360 ... Q9ZLT0 N/A
    879518 8tbe:A (2.15) BS01 ZQB 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37800975
    879519 8tbe:B (2.15) BS01 ZQB 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37800975
    879520 8tbf:A (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879521 8tbf:A (1.5) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879522 8tbf:A (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879523 8tbf:B (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879524 8tbf:B (1.5) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879525 8tbf:B (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879526 8tbf:C (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879527 8tbf:D (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879528 8tbg:A (1.2) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 38589574
    879529 8tbg:A (1.2) BS02 MG 3.6.5.2 GO:0003924 ... P01112 38589574
    879530 8tbg:A (1.2) BS03 ZNI 3.6.5.2 GO:0003924 ... P01112 38589574
    879531 8tbg:B (1.2) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 38589574
    879532 8tbg:B (1.2) BS02 MG 3.6.5.2 GO:0003924 ... P01112 38589574
    879533 8tbg:B (1.2) BS03 ZNI 3.6.5.2 GO:0003924 ... P01112 38589574
    879534 8tbg:C (1.2) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879535 8tbg:D (1.2) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879536 8tbh:A (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879537 8tbh:A (1.5) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879538 8tbh:A (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879539 8tbh:B (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879540 8tbh:B (1.5) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879541 8tbh:B (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879542 8tbh:C (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879543 8tbh:D (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879544 8tbi:A (1.59) BS01 GNP 3.6.5.2 GO:0000139 ... P01111 38589574
    879545 8tbi:A (1.59) BS02 MG 3.6.5.2 GO:0000139 ... P01111 38589574
    879546 8tbi:A (1.59) BS03 ZNI 3.6.5.2 GO:0000139 ... P01111 38589574
    879547 8tbi:B (1.59) BS01 GNP 3.6.5.2 GO:0000139 ... P01111 38589574
    879548 8tbi:B (1.59) BS02 MG 3.6.5.2 GO:0000139 ... P01111 38589574
    879549 8tbi:B (1.59) BS03 ZNI 3.6.5.2 GO:0000139 ... P01111 38589574
    879550 8tbi:C (1.59) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879551 8tbi:D (1.59) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879552 8tbj:A (1.45) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879553 8tbj:A (1.45) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879554 8tbj:A (1.45) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879555 8tbj:B (1.45) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879556 8tbj:B (1.45) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879557 8tbj:B (1.45) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879558 8tbj:C (1.45) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879559 8tbj:D (1.45) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879560 8tbk:A (1.26) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879561 8tbk:A (1.26) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879562 8tbk:A (1.26) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879563 8tbk:B (1.26) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879564 8tbk:B (1.26) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879565 8tbk:B (1.26) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879566 8tbk:C (1.26) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879567 8tbk:D (1.26) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879568 8tbl:A (1.88) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879569 8tbl:A (1.88) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879570 8tbl:A (1.88) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879571 8tbl:B (1.88) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879572 8tbl:B (1.88) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879573 8tbl:B (1.88) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879574 8tbl:C (1.88) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879575 8tbl:D (1.88) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879576 8tbm:A (1.57) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879577 8tbm:A (1.57) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879578 8tbm:A (1.57) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879579 8tbm:B (1.57) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879580 8tbm:B (1.57) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879581 8tbm:B (1.57) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879582 8tbm:C (1.57) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879583 8tbm:D (1.57) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879584 8tbn:A (1.46) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879585 8tbn:A (1.46) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879586 8tbn:A (1.46) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879587 8tbn:B (1.46) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    879588 8tbn:B (1.46) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    879589 8tbn:B (1.46) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    879590 8tbn:C (1.46) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879591 8tbn:D (1.46) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    879592 8tbp:A (3.12621) BS01 peptide ? GO:0006955 ... P01903 38321013
    879593 8tbp:B (3.12621) BS01 peptide ? GO:0006955 ... P01911 38321013
    879594 8tbp:C (3.12621) BS01 peptide ? GO:0006955 ... P01903 38321013
    879595 8tbp:D (3.12621) BS01 peptide ? GO:0006955 ... P01911 38321013
    879596 8tbr:A (1.75) BS01 NAP N/A GO:0000166 ... A0PQG8 39468773
    879597 8tbr:A (1.75) BS02 HIJ N/A GO:0000166 ... A0PQG8 39468773
    879598 8tbs:A (2.35) BS01 FBP 2.7.1.40 GO:0000287 ... P30613 38109501
    879599 8tbs:A (2.35) BS02 MN 2.7.1.40 GO:0000287 ... P30613 38109501
    879600 8tbs:A (2.35) BS03 PYR 2.7.1.40 GO:0000287 ... P30613 38109501

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).