SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    879801 8td1:C (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    879802 8td1:C (1.88) BS02 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    879803 8td1:D (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    879804 8td1:D (1.88) BS02 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    879805 8td1:E (1.88) BS01 ZRZ 1.5.1.2 GO:0004735 ... P32322 38411104
    879806 8td2:A (1.65) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879807 8td2:A (1.65) BS02 ZPS N/A GO:0004735 ... P32322 39133178
    879808 8td2:B (1.65) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879809 8td2:B (1.65) BS02 ZPS N/A GO:0004735 ... P32322 39133178
    879810 8td2:C (1.65) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879811 8td2:C (1.65) BS02 ZPS N/A GO:0004735 ... P32322 39133178
    879812 8td2:D (1.65) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879813 8td2:D (1.65) BS02 ZPS N/A GO:0004735 ... P32322 39133178
    879814 8td2:E (1.65) BS01 ZPS N/A GO:0004735 ... P32322 39133178
    879815 8td3:A (1.67) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879816 8td3:A (1.67) BS02 GJM N/A GO:0004735 ... P32322 39133178
    879817 8td3:A (1.67) BS03 GJM N/A GO:0004735 ... P32322 39133178
    879818 8td3:B (1.67) BS01 GJM N/A GO:0004735 ... P32322 39133178
    879819 8td3:B (1.67) BS02 GJM N/A GO:0004735 ... P32322 39133178
    879820 8td3:B (1.67) BS03 NAI N/A GO:0004735 ... P32322 39133178
    879821 8td3:C (1.67) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879822 8td3:C (1.67) BS02 GJM N/A GO:0004735 ... P32322 39133178
    879823 8td3:C (1.67) BS03 GJM N/A GO:0004735 ... P32322 39133178
    879824 8td3:D (1.67) BS01 GJM N/A GO:0004735 ... P32322 39133178
    879825 8td3:D (1.67) BS02 GJM N/A GO:0004735 ... P32322 39133178
    879826 8td3:D (1.67) BS03 NAI N/A GO:0004735 ... P32322 39133178
    879827 8td3:E (1.67) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879828 8td3:E (1.67) BS02 GJM N/A GO:0004735 ... P32322 39133178
    879829 8td4:A (1.76) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879830 8td4:A (1.76) BS02 UJD N/A GO:0004735 ... P32322 39133178
    879831 8td4:B (1.76) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879832 8td4:B (1.76) BS02 UJD N/A GO:0004735 ... P32322 39133178
    879833 8td4:C (1.76) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879834 8td4:C (1.76) BS02 UJD N/A GO:0004735 ... P32322 39133178
    879835 8td4:C (1.76) BS03 UJD N/A GO:0004735 ... P32322 39133178
    879836 8td4:D (1.76) BS01 UJD N/A GO:0004735 ... P32322 39133178
    879837 8td4:D (1.76) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879838 8td4:D (1.76) BS03 UJD N/A GO:0004735 ... P32322 39133178
    879839 8td4:E (1.76) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879840 8td4:E (1.76) BS02 UJD N/A GO:0004735 ... P32322 39133178
    879841 8td5:A (1.81) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879842 8td5:A (1.81) BS02 UJP N/A GO:0004735 ... P32322 39133178
    879843 8td5:B (1.81) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879844 8td5:B (1.81) BS02 UJP N/A GO:0004735 ... P32322 39133178
    879845 8td5:C (1.81) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879846 8td5:C (1.81) BS02 UJP N/A GO:0004735 ... P32322 39133178
    879847 8td5:D (1.81) BS01 UJP N/A GO:0004735 ... P32322 39133178
    879848 8td5:D (1.81) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879849 8td5:D (1.81) BS03 UJP N/A GO:0004735 ... P32322 39133178
    879850 8td5:E (1.81) BS01 UJP N/A GO:0004735 ... P32322 39133178
    879851 8td6:A (2.08) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879852 8td6:B (2.08) BS01 MTG N/A GO:0004735 ... P32322 39133178
    879853 8td6:B (2.08) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879854 8td6:C (2.08) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879855 8td6:C (2.08) BS02 MTG N/A GO:0004735 ... P32322 39133178
    879856 8td6:C (2.08) BS03 MTG N/A GO:0004735 ... P32322 39133178
    879857 8td6:D (2.08) BS01 MTG N/A GO:0004735 ... P32322 39133178
    879858 8td6:D (2.08) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879859 8td6:D (2.08) BS03 MTG N/A GO:0004735 ... P32322 39133178
    879860 8td6:E (2.08) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879861 8td7:A (1.61) BS01 LHV N/A GO:0004735 ... P32322 39133178
    879862 8td7:B (1.61) BS01 LHV N/A GO:0004735 ... P32322 39133178
    879863 8td7:B (1.61) BS02 LHV N/A GO:0004735 ... P32322 39133178
    879864 8td7:C (1.61) BS01 LHV N/A GO:0004735 ... P32322 39133178
    879865 8td7:D (1.61) BS01 LHV N/A GO:0004735 ... P32322 39133178
    879866 8td7:E (1.61) BS01 LHV N/A GO:0004735 ... P32322 39133178
    879867 8td8:A (1.71) BS01 G8I N/A GO:0004735 ... P32322 39133178
    879868 8td8:A (1.71) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879869 8td8:B (1.71) BS01 G8I N/A GO:0004735 ... P32322 39133178
    879870 8td8:B (1.71) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879871 8td8:C (1.71) BS01 G8I N/A GO:0004735 ... P32322 39133178
    879872 8td8:C (1.71) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879873 8td8:C (1.71) BS03 G8I N/A GO:0004735 ... P32322 39133178
    879874 8td8:D (1.71) BS01 G8I N/A GO:0004735 ... P32322 39133178
    879875 8td8:D (1.71) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879876 8td8:E (1.71) BS01 G8I N/A GO:0004735 ... P32322 39133178
    879877 8td9:A (1.75) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879878 8td9:A (1.75) BS02 YCP N/A GO:0004735 ... P32322 39133178
    879879 8td9:A (1.75) BS03 YCP N/A GO:0004735 ... P32322 39133178
    879880 8td9:B (1.75) BS01 YCP N/A GO:0004735 ... P32322 39133178
    879881 8td9:B (1.75) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879882 8td9:B (1.75) BS03 YCP N/A GO:0004735 ... P32322 39133178
    879883 8td9:C (1.75) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879884 8td9:C (1.75) BS02 YCP N/A GO:0004735 ... P32322 39133178
    879885 8td9:C (1.75) BS03 YCP N/A GO:0004735 ... P32322 39133178
    879886 8td9:D (1.75) BS01 YCP N/A GO:0004735 ... P32322 39133178
    879887 8td9:D (1.75) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879888 8td9:D (1.75) BS03 YCP N/A GO:0004735 ... P32322 39133178
    879889 8td9:E (1.75) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879890 8td9:E (1.75) BS02 YCP N/A GO:0004735 ... P32322 39133178
    879891 8tdb:A (2.3) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879892 8tdb:A (2.3) BS02 GHO N/A GO:0004735 ... P32322 39133178
    879893 8tdb:B (2.3) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879894 8tdb:B (2.3) BS02 GHO N/A GO:0004735 ... P32322 39133178
    879895 8tdb:C (2.3) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879896 8tdb:C (2.3) BS02 GHO N/A GO:0004735 ... P32322 39133178
    879897 8tdb:D (2.3) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879898 8tdb:D (2.3) BS02 GHO N/A GO:0004735 ... P32322 39133178
    879899 8tdb:E (2.3) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879900 8tdb:E (2.3) BS02 GHO N/A GO:0004735 ... P32322 39133178
    879901 8tdc:A (1.8) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879902 8tdc:A (1.8) BS02 GIW N/A GO:0004735 ... P32322 39133178
    879903 8tdc:B (1.8) BS01 GIW N/A GO:0004735 ... P32322 39133178
    879904 8tdc:B (1.8) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879905 8tdc:C (1.8) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879906 8tdc:C (1.8) BS02 GIW N/A GO:0004735 ... P32322 39133178
    879907 8tdc:D (1.8) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879908 8tdc:D (1.8) BS02 GIW N/A GO:0004735 ... P32322 39133178
    879909 8tdc:E (1.8) BS01 GIW N/A GO:0004735 ... P32322 39133178
    879910 8tdd:A (1.91) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879911 8tdd:A (1.91) BS02 SJU N/A GO:0004735 ... P32322 39133178
    879912 8tdd:B (1.91) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879913 8tdd:B (1.91) BS02 SJU N/A GO:0004735 ... P32322 39133178
    879914 8tdd:C (1.91) BS01 NAI N/A GO:0004735 ... P32322 39133178
    879915 8tdd:C (1.91) BS02 SJU N/A GO:0004735 ... P32322 39133178
    879916 8tdd:D (1.91) BS01 SJU N/A GO:0004735 ... P32322 39133178
    879917 8tdd:D (1.91) BS02 NAI N/A GO:0004735 ... P32322 39133178
    879918 8tde:A (1.85) BS01 GLC ? GO:0005886 ... Q8A5T1 38898276
    879919 8tdf:A (2.1) BS01 NAD ? GO:0000166 ... N/A 38898276
    879920 8tdf:B (2.1) BS01 NAD ? GO:0000166 ... N/A 38898276
    879921 8tdf:C (2.1) BS01 NAD ? GO:0000166 ... N/A 38898276
    879922 8tdf:D (2.1) BS01 NAD ? GO:0000166 ... N/A 38898276
    879923 8tdh:A (2.95) BS01 GLC N/A GO:0000166 ... N/A 38898276
    879924 8tdh:A (2.95) BS02 GLC N/A GO:0000166 ... N/A 38898276
    879925 8tdh:A (2.95) BS03 GLC N/A GO:0000166 ... N/A 38898276
    879926 8tdh:A (2.95) BS04 GLC N/A GO:0000166 ... N/A 38898276
    879927 8tdh:A (2.95) BS05 GLC N/A GO:0000166 ... N/A 38898276
    879928 8tdh:A (2.95) BS06 NAD N/A GO:0000166 ... N/A 38898276
    879929 8tdh:B (2.95) BS01 GLC N/A GO:0000166 ... N/A 38898276
    879930 8tdh:B (2.95) BS02 GLC N/A GO:0000166 ... N/A 38898276
    879931 8tdh:B (2.95) BS03 GLC N/A GO:0000166 ... N/A 38898276
    879932 8tdh:B (2.95) BS04 GLC N/A GO:0000166 ... N/A 38898276
    879933 8tdh:B (2.95) BS05 GLC N/A GO:0000166 ... N/A 38898276
    879934 8tdh:B (2.95) BS06 GLC N/A GO:0000166 ... N/A 38898276
    879935 8tdh:B (2.95) BS07 GLC N/A GO:0000166 ... N/A 38898276
    879936 8tdh:B (2.95) BS08 GLC N/A GO:0000166 ... N/A 38898276
    879937 8tdh:B (2.95) BS09 GLC N/A GO:0000166 ... N/A 38898276
    879938 8tdh:B (2.95) BS10 NAD N/A GO:0000166 ... N/A 38898276
    879939 8tdh:C (2.95) BS01 GLC N/A GO:0000166 ... N/A 38898276
    879940 8tdh:C (2.95) BS02 GLC N/A GO:0000166 ... N/A 38898276
    879941 8tdh:C (2.95) BS03 GLC N/A GO:0000166 ... N/A 38898276
    879942 8tdh:C (2.95) BS04 GLC N/A GO:0000166 ... N/A 38898276
    879943 8tdh:C (2.95) BS05 GLC N/A GO:0000166 ... N/A 38898276
    879944 8tdh:C (2.95) BS06 GLC N/A GO:0000166 ... N/A 38898276
    879945 8tdh:C (2.95) BS07 GLC N/A GO:0000166 ... N/A 38898276
    879946 8tdh:C (2.95) BS08 GLC N/A GO:0000166 ... N/A 38898276
    879947 8tdh:C (2.95) BS09 NAD N/A GO:0000166 ... N/A 38898276
    879948 8tdh:D (2.95) BS01 GLC N/A GO:0000166 ... N/A 38898276
    879949 8tdh:D (2.95) BS02 GLC N/A GO:0000166 ... N/A 38898276
    879950 8tdh:D (2.95) BS03 GLC N/A GO:0000166 ... N/A 38898276
    879951 8tdh:D (2.95) BS04 GLC N/A GO:0000166 ... N/A 38898276
    879952 8tdh:D (2.95) BS05 GLC N/A GO:0000166 ... N/A 38898276
    879953 8tdh:D (2.95) BS06 GLC N/A GO:0000166 ... N/A 38898276
    879954 8tdh:D (2.95) BS07 NAD N/A GO:0000166 ... N/A 38898276
    879955 8tdi:A (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879956 8tdi:B (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879957 8tdi:C (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879958 8tdi:D (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879959 8tdi:E (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879960 8tdi:F (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879961 8tdi:G (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879962 8tdi:H (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879963 8tdi:I (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879964 8tdi:J (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879965 8tdi:K (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879966 8tdi:L (2.6) BS01 NAD N/A GO:0000166 ... N/A 38898276
    879967 8tdp:A (1.85) BS01 HEM 1.14.19.70 GO:0004497 ... P9WPP7 37939223
    879968 8tdp:A (1.85) BS02 YTT 1.14.19.70 GO:0004497 ... P9WPP7 37939223
    879969 8tdq:A (1.65) BS01 HEM 1.14.19.70 GO:0004497 ... P9WPP7 37939223
    879970 8tdq:A (1.65) BS02 YTT 1.14.19.70 GO:0004497 ... P9WPP7 37939223
    879971 8tdr:A (3.32) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    879972 8tdr:B (3.32) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    879973 8tdr:C (3.32) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    879974 8tdr:D (3.32) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    879975 8tdu:A (3.11) BS01 X3N 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    879976 8tdu:A (3.11) BS02 ZWE 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    879977 8tdu:C (3.11) BS01 X3N 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    879978 8tdu:C (3.11) BS02 ZWE 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P42336 37623743
    879979 8tdv:A (3.44) BS01 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879980 8tdv:A (3.44) BS02 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879981 8tdv:A (3.44) BS03 FE 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879982 8tdv:B (3.44) BS01 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879983 8tdv:B (3.44) BS02 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879984 8tdv:B (3.44) BS03 FE 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879985 8tdw:A (3.04) BS01 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879986 8tdw:A (3.04) BS02 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879987 8tdw:A (3.04) BS03 FE 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879988 8tdw:B (3.04) BS01 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879989 8tdw:B (3.04) BS02 rna 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879990 8tdw:B (3.04) BS03 FE 3.1.5.- GO:0000724 ... Q9Y3Z3 37930833
    879991 8tdx:A (2.09) BS01 peptide N/A N/A N/A 39471811
    879992 8tdx:B (2.09) BS01 peptide N/A N/A N/A 39471811
    879993 8tdx:C (2.09) BS01 peptide N/A N/A N/A 39471811
    879994 8tdx:D (2.09) BS01 peptide N/A N/A N/A 39471811
    879995 8te1:A (2.48) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    879996 8te1:B (2.48) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    879997 8te1:C (2.48) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    879998 8te1:D (2.48) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    879999 8te3:A (3.2) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075
    880000 8te3:B (3.2) BS01 SAH 2.1.1.-
    2.1.1.37
    GO:0008168 ... Q9Y6K1 38600075

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).