SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    882001 8tsi:A (4.4) BS01 ADP ? GO:0005524 ... A0A2S5T4B3 38570679
    882002 8tsi:A (4.4) BS02 ALF ? GO:0005524 ... A0A2S5T4B3 38570679
    882003 8tsi:A (4.4) BS03 ALF ? GO:0005524 ... A0A2S5T4B3 38570679
    882004 8tsi:A (4.4) BS04 ADP ? GO:0005524 ... A0A2S5T4B3 38570679
    882005 8tsi:B (4.4) BS01 ADP ? GO:0005524 ... A0A2S5T4B3 38570679
    882006 8tsi:B (4.4) BS02 ALF ? GO:0005524 ... A0A2S5T4B3 38570679
    882007 8tsi:B (4.4) BS03 ALF ? GO:0005524 ... A0A2S5T4B3 38570679
    882008 8tsi:B (4.4) BS04 ADP ? GO:0005524 ... A0A2S5T4B3 38570679
    882009 8tsn:A () BS01 QCV N/A N/A N/A N/A
    882010 8tso:A (2.68) BS01 KDL N/A GO:0005524 ... P60752 39009687
    882011 8tso:A (2.68) BS02 KDL N/A GO:0005524 ... P60752 39009687
    882012 8tso:B (2.68) BS01 KDL N/A GO:0005524 ... P60752 39009687
    882013 8tso:B (2.68) BS02 KDL N/A GO:0005524 ... P60752 39009687
    882014 8tt3:C (3.4) BS01 KJ9 ? GO:0005886 ... A0A2S5T447 38570679
    882015 8tt3:D (3.4) BS01 KJ9 ? GO:0005886 ... A0A2S5T447 38570679
    882016 8tt9:A (1.68) BS01 ENO N/A GO:0001516 ... P14174 N/A
    882017 8tt9:A (1.68) BS02 ENO N/A GO:0001516 ... P14174 N/A
    882018 8tt9:B (1.68) BS01 ENO N/A GO:0001516 ... P14174 N/A
    882019 8tt9:B (1.68) BS02 ENO N/A GO:0001516 ... P14174 N/A
    882020 8tt9:C (1.68) BS01 ENO N/A GO:0001516 ... P14174 N/A
    882021 8tt9:C (1.68) BS02 ENO N/A GO:0001516 ... P14174 N/A
    882022 8tta:A (3.46) BS01 peptide N/A GO:0005515 ... Q9QZ88 39116126
    882023 8tta:C (3.46) BS01 peptide N/A GO:0005515 ... Q9QZ88 39116126
    882024 8ttb:C (2.77) BS01 FE 3.1.3.16 GO:0000159 ... P67775 38123684
    882025 8ttb:C (2.77) BS02 ZN 3.1.3.16 GO:0000159 ... P67775 38123684
    882026 8ttc:D (3.01) BS01 peptide N/A GO:0015031 ... Q9EQH3 39116126
    882027 8ttd:A (2.011) BS01 peptide N/A GO:0005515 ... Q9QZ88 39116126
    882028 8tte:A (3.26) BS01 peptide ? GO:0005886 ... P0A0J7 38802368
    882029 8ttg:A (3.35) BS01 peptide ? GO:0005886 ... P0A0J7 38802368
    882030 8tti:A (1.98) BS01 TRP ? GO:0000166 ... M9QSI0 37662313
    882031 8tti:B (1.98) BS01 TRP ? GO:0000166 ... M9QSI0 37662313
    882032 8tti:C (1.98) BS01 FAD ? GO:0000166 ... M9QSI0 37662313
    882033 8tti:D (1.98) BS01 FAD ? GO:0000166 ... M9QSI0 37662313
    882034 8ttj:A (1.98) BS01 6CW ? GO:0000166 ... M9QSI0 37662313
    882035 8ttj:B (1.98) BS01 6CW ? GO:0000166 ... M9QSI0 37662313
    882036 8ttj:C (1.98) BS01 6CW ? GO:0000166 ... M9QSI0 37662313
    882037 8ttj:D (1.98) BS01 6CW ? GO:0000166 ... M9QSI0 37662313
    882038 8ttl:A (2.6) BS01 peptide N/A GO:0008017 ... P10636 38408247
    882039 8ttl:B (2.6) BS01 peptide N/A GO:0008017 ... P10636 38408247
    882040 8ttl:C (2.6) BS01 peptide N/A GO:0008017 ... P10636 38408247
    882041 8ttm:A (2.51) BS01 FUC N/A N/A P0DOX5 38598628
    882042 8ttm:B (2.51) BS01 BMA N/A N/A P0DOX5 38598628
    882043 8ttp:A (1.43) BS01 NXL 3.5.2.6 GO:0008800 ... A0A377KDY3 N/A
    882044 8ttp:B (1.43) BS01 NXL 3.5.2.6 GO:0008800 ... A0A377KDY3 N/A
    882045 8ttr:A (1.45) BS01 ZN N/A GO:0002009 ... P00918 39550697
    882046 8ttr:A (1.45) BS02 LGO N/A GO:0002009 ... P00918 39550697
    882047 8ttt:A (2.35) BS01 peptide N/A GO:0007165 ... Q96L92 39116126
    882048 8ttu:A (2.36) BS01 peptide N/A GO:0007165 ... Q96L92 39116126
    882049 8ttv:A (2.0) BS01 peptide N/A GO:0007165 ... Q96L92 39116126
    882050 8ttw:A (2.96) BS01 83J ? GO:0019031 ... Q2N0S6 37872202
    882051 8ttw:C (2.96) BS01 BMA N/A N/A N/A 37872202
    882052 8ttw:C (2.96) BS02 MAN N/A N/A N/A 37872202
    882053 8ttw:C (2.96) BS03 MAN N/A N/A N/A 37872202
    882054 8ttw:C (2.96) BS04 MAN N/A N/A N/A 37872202
    882055 8ttw:E (2.96) BS01 MAN ? GO:0019031 ... Q2N0S6 37872202
    882056 8ttw:E (2.96) BS02 83J ? GO:0019031 ... Q2N0S6 37872202
    882057 8ttw:G (2.96) BS01 BMA N/A N/A N/A 37872202
    882058 8ttw:G (2.96) BS02 MAN N/A N/A N/A 37872202
    882059 8ttw:G (2.96) BS03 MAN N/A N/A N/A 37872202
    882060 8ttw:G (2.96) BS04 MAN N/A N/A N/A 37872202
    882061 8ttw:I (2.96) BS01 MAN ? GO:0019031 ... Q2N0S6 37872202
    882062 8ttw:I (2.96) BS02 83J ? GO:0019031 ... Q2N0S6 37872202
    882063 8ttw:K (2.96) BS01 BMA N/A N/A N/A 37872202
    882064 8ttw:K (2.96) BS02 MAN N/A N/A N/A 37872202
    882065 8ttw:K (2.96) BS03 MAN N/A N/A N/A 37872202
    882066 8ttw:K (2.96) BS04 MAN N/A N/A N/A 37872202
    882067 8ttw:N (2.96) BS01 MAN N/A N/A N/A 37872202
    882068 8ttw:N (2.96) BS02 MAN N/A N/A N/A 37872202
    882069 8ttw:P (2.96) BS01 MAN N/A N/A N/A 37872202
    882070 8ttw:R (2.96) BS01 MAN N/A N/A N/A 37872202
    882071 8ttw:R (2.96) BS02 MAN N/A N/A N/A 37872202
    882072 8tty:A (2.101) BS01 QEC ? GO:0002224 ... B3Y653 38352830
    882073 8tty:A (2.101) BS02 QEC ? GO:0002224 ... B3Y653 38352830
    882074 8tty:B (2.101) BS01 QEC ? GO:0002224 ... B3Y653 38352830
    882075 8tty:B (2.101) BS02 QEC ? GO:0002224 ... B3Y653 38352830
    882076 8ttz:A (3.14) BS01 QCX ? GO:0002224 ... B3Y653 38352830
    882077 8ttz:A (3.14) BS02 QCX ? GO:0002224 ... B3Y653 38352830
    882078 8ttz:B (3.14) BS01 QCX ? GO:0002224 ... B3Y653 38352830
    882079 8ttz:B (3.14) BS02 QCX ? GO:0002224 ... B3Y653 38352830
    882080 8tu3:A (1.7) BS01 UEO N/A GO:0004672 ... Q06187 38712838
    882081 8tu4:A (1.6) BS01 V72 N/A GO:0004672 ... Q06187 38712838
    882082 8tu5:A (2.1) BS01 V7I N/A GO:0004672 ... Q06187 38712838
    882083 8tu7:A (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882084 8tu7:B (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882085 8tu7:C (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882086 8tu7:D (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882087 8tu7:E (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882088 8tu7:F (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882089 8tu7:G (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882090 8tu7:H (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882091 8tu7:I (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882092 8tu7:J (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882093 8tu7:K (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882094 8tu7:L (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882095 8tu7:M (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882096 8tu7:N (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882097 8tu7:O (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882098 8tu7:P (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882099 8tu7:Q (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882100 8tu7:R (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882101 8tu7:S (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882102 8tu7:T (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882103 8tu7:U (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882104 8tu7:V (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882105 8tu7:W (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882106 8tu7:X (2.5) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882107 8tu8:A (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882108 8tu8:B (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882109 8tu8:C (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882110 8tu8:D (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882111 8tu8:E (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882112 8tu8:F (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882113 8tu8:G (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882114 8tu8:I (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882115 8tu8:J (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882116 8tu8:K (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882117 8tu8:L (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882118 8tu8:M (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882119 8tu8:N (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882120 8tu8:P (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882121 8tu8:R (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882122 8tu8:S (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882123 8tu8:T (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882124 8tu8:U (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882125 8tu8:V (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882126 8tu8:X (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882127 8tu9:A (3.26) BS01 ACO 2.3.1.78 GO:0005764 ... P42212
    Q68CP4
    39196614
    882128 8tu9:B (3.26) BS01 ACO 2.3.1.78 GO:0005764 ... P42212
    Q68CP4
    39196614
    882129 8tua:A (4.1) BS01 4IP ? GO:0005085 ... Q8TCU6 N/A
    882130 8tub:C (2.4) BS01 peptide ? N/A P01889 38684663
    882131 8tub:F (2.4) BS01 peptide ? N/A P01889 38684663
    882132 8tub:F (2.4) BS02 peptide ? N/A P01889 38684663
    882133 8tub:G (2.4) BS01 peptide ? N/A P01889 38684663
    882134 8tub:J (2.4) BS01 peptide ? N/A P01889 38684663
    882135 8tub:J (2.4) BS02 peptide ? N/A P01889 38684663
    882136 8tuc:A (1.5) BS01 O7I 2.7.11.17 GO:0004672 ... Q96RR4 38009718
    882137 8tud:B (3.0) BS01 BMA N/A N/A P0DOX5 38598628
    882138 8tue:A (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882139 8tue:B (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882140 8tue:C (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882141 8tue:E (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882142 8tue:F (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882143 8tue:H (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882144 8tue:M (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882145 8tue:N (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882146 8tue:O (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882147 8tue:P (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882148 8tue:Q (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882149 8tue:R (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882150 8tue:T (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882151 8tue:U (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882152 8tue:V (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882153 8tue:W (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882154 8tue:X (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    882155 8tuf:A (2.03) BS01 MG N/A N/A K4L8Z7 N/A
    882156 8tug:A (3.5) BS01 dna 2.7.7.6 GO:0000428 ... P04050 38194460
    882157 8tug:A (3.5) BS02 dna 2.7.7.6 GO:0000428 ... P04050 38194460
    882158 8tug:A (3.5) BS03 rna 2.7.7.6 GO:0000428 ... P04050 38194460
    882159 8tug:A (3.5) BS04 ZN 2.7.7.6 GO:0000428 ... P04050 38194460
    882160 8tug:A (3.5) BS05 ZN 2.7.7.6 GO:0000428 ... P04050 38194460
    882161 8tug:A (3.5) BS06 MG 2.7.7.6 GO:0000428 ... P04050 38194460
    882162 8tug:B (3.5) BS01 dna 2.7.7.6 GO:0000428 ... P08518 38194460
    882163 8tug:B (3.5) BS02 dna 2.7.7.6 GO:0000428 ... P08518 38194460
    882164 8tug:B (3.5) BS03 rna 2.7.7.6 GO:0000428 ... P08518 38194460
    882165 8tug:B (3.5) BS04 ZN 2.7.7.6 GO:0000428 ... P08518 38194460
    882166 8tug:C (3.5) BS01 ZN ? GO:0000428 ... P16370 38194460
    882167 8tug:E (3.5) BS01 dna ? GO:0000428 ... P20434 38194460
    882168 8tug:I (3.5) BS01 ZN ? GO:0000428 ... P27999 38194460
    882169 8tug:I (3.5) BS02 ZN ? GO:0000428 ... P27999 38194460
    882170 8tug:J (3.5) BS01 ZN ? GO:0000428 ... P22139 38194460
    882171 8tug:L (3.5) BS01 ZN ? GO:0000428 ... P40422 38194460
    882172 8tug:M (3.5) BS01 dna N/A N/A N/A 38194460
    882173 8tug:M (3.5) BS02 dna N/A N/A N/A 38194460
    882174 8tuh:A (2.20011) BS01 peptide ? N/A P01889 38684663
    882175 8tun:C (3.4) BS01 KJ9 ? GO:0005886 ... A0A2S5T447 38570679
    882176 8tun:D (3.4) BS01 KJ9 ? GO:0005886 ... A0A2S5T447 38570679
    882177 8tuq:A (2.0) BS01 peptide ? GO:0005737 ... P52293 38108201
    882178 8tur:A (2.15) BS01 peptide ? GO:0005737 ... P52293 38108201
    882179 8tus:A (2.6) BS01 peptide ? GO:0005737 ... P52293 38108201
    882180 8tut:A (2.55) BS01 peptide ? GO:0005737 ... P52293 38108201
    882181 8tuu:A (2.5) BS01 peptide ? GO:0005737 ... P52293 38108201
    882182 8tuv:A (2.3) BS01 peptide ? GO:0005737 ... P52293 38108201
    882183 8tuv:A (2.3) BS02 peptide ? GO:0005737 ... P52293 38108201
    882184 8tux:M (3.9) BS01 rna ? GO:0039666 ... Q38061 38574145
    882185 8tux:ab (3.9) BS01 rna ? GO:0003723 ... P03630 38574145
    882186 8tux:m (3.9) BS01 rna ? GO:0039666 ... Q38061 38574145
    882187 8tv5:C (4.6) BS01 MG N/A GO:0005003 ... P29317 N/A
    882188 8tv6:B (1.74) BS01 V83 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 38592023
    882189 8tv7:A (1.5) BS01 VI1 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 38592023
    882190 8tvc:A (1.93) BS01 dna N/A GO:0000932 ... Q7YR23 39389938
    882191 8tvc:A (1.93) BS02 ZN N/A GO:0000932 ... Q7YR23 39389938
    882192 8tvc:A (1.93) BS03 ZN N/A GO:0000932 ... Q7YR23 39389938
    882193 8tvi:A (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    882194 8tvi:B (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    882195 8tvi:C (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    882196 8tvi:D (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    882197 8tvk:A (1.04) BS01 GDP N/A GO:0003924 ... P01116 N/A
    882198 8tvm:A (2.1) BS01 VDC N/A GO:0000287 ... Q9NWZ3 38746903
    882199 8tvm:B (2.1) BS01 VDC N/A GO:0000287 ... Q9NWZ3 38746903
    882200 8tvm:C (2.1) BS01 VDC N/A GO:0000287 ... Q9NWZ3 38746903

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).