SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    882401 8stw:F (2.4) BS02 HEM 4.2.1.22 GO:0004122 ... P35520 37949228
    882402 8sty:A (1.9) BS01 WGE 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37561993
    882403 8stz:A (1.85) BS01 WGI 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37561993
    882404 8su1:A (1.37) BS01 MG 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882405 8su1:A (1.37) BS02 210 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882406 8su2:A (1.33) BS01 RIS 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882407 8su2:A (1.33) BS02 MG 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882408 8su3:A (1.29) BS01 MG 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882409 8su3:A (1.29) BS02 POP 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882410 8su3:A (1.29) BS03 BTM 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882411 8su4:A (1.43) BS01 MG 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882412 8su4:A (1.43) BS02 POP 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882413 8su4:A (1.43) BS03 BTM 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882414 8su5:A (1.48) BS01 BTM 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882415 8su5:A (1.48) BS02 MG 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882416 8su5:A (1.48) BS03 POP 4.2.3.37 GO:0010333 ... Q9K499 37449555
    882417 8su6:A (1.5) BS01 PLP 2.6.1.87 GO:0000271 ... A0A0H3FL22 N/A
    882418 8su6:B (1.5) BS01 PLP 2.6.1.87 GO:0000271 ... A0A0H3FL22 N/A
    882419 8su8:A (2.01) BS01 XE2 ? N/A O00522 37974623
    882420 8su8:B (2.01) BS01 MG 3.6.5.2 GO:0003924 ... P61224 37974623
    882421 8su8:B (2.01) BS02 GNP 3.6.5.2 GO:0003924 ... P61224 37974623
    882422 8su9:A (2.83) BS01 AR6 N/A N/A N/A 38096827
    882423 8su9:B (2.83) BS01 AR6 N/A N/A N/A 38096827
    882424 8su9:C (2.83) BS01 AR6 N/A N/A N/A 38096827
    882425 8su9:D (2.83) BS01 AR6 N/A N/A N/A 38096827
    882426 8su9:E (2.83) BS01 AR6 N/A N/A N/A 38096827
    882427 8su9:F (2.83) BS01 AR6 N/A N/A N/A 38096827
    882428 8su9:G (2.83) BS01 AR6 N/A N/A N/A 38096827
    882429 8su9:H (2.83) BS01 AR6 N/A N/A N/A 38096827
    882430 8su9:I (2.83) BS01 AR6 N/A N/A N/A 38096827
    882431 8su9:J (2.83) BS01 AR6 N/A N/A N/A 38096827
    882432 8su9:K (2.83) BS01 AR6 N/A N/A N/A 38096827
    882433 8su9:L (2.83) BS01 AR6 N/A N/A N/A 38096827
    882434 8su9:M (2.83) BS01 ADP N/A N/A N/A 38096827
    882435 8su9:N (2.83) BS01 ADP N/A N/A N/A 38096827
    882436 8su9:O (2.83) BS01 ADP N/A N/A N/A 38096827
    882437 8su9:P (2.83) BS01 ADP N/A N/A N/A 38096827
    882438 8su9:Q (2.83) BS01 ADP N/A N/A N/A 38096827
    882439 8sua:A (1.6) BS01 YT9 N/A GO:0000976 ... A0AAJ6N6J9 37945601
    882440 8sub:A (2.89) BS01 AR6 N/A N/A N/A 38096827
    882441 8sub:B (2.89) BS01 AR6 N/A N/A N/A 38096827
    882442 8sub:C (2.89) BS01 AR6 N/A N/A N/A 38096827
    882443 8sub:D (2.89) BS01 AR6 N/A N/A N/A 38096827
    882444 8sub:E (2.89) BS01 AR6 N/A N/A N/A 38096827
    882445 8sub:F (2.89) BS01 AR6 N/A N/A N/A 38096827
    882446 8sub:G (2.89) BS01 AR6 N/A N/A N/A 38096827
    882447 8sub:H (2.89) BS01 AR6 N/A N/A N/A 38096827
    882448 8sub:I (2.89) BS01 AR6 N/A N/A N/A 38096827
    882449 8sub:J (2.89) BS01 AR6 N/A N/A N/A 38096827
    882450 8sub:K (2.89) BS01 AR6 N/A N/A N/A 38096827
    882451 8sub:L (2.89) BS01 AR6 N/A N/A N/A 38096827
    882452 8sub:M (2.89) BS01 ADP N/A N/A N/A 38096827
    882453 8sub:N (2.89) BS01 ADP N/A N/A N/A 38096827
    882454 8sub:O (2.89) BS01 ADP N/A N/A N/A 38096827
    882455 8sub:P (2.89) BS01 ADP N/A N/A N/A 38096827
    882456 8sub:Q (2.89) BS01 ADP N/A N/A N/A 38096827
    882457 8sub:Q (2.89) BS02 MG N/A N/A N/A 38096827
    882458 8suc:A (1.4) BS01 MG 2.3.2.27 N/A Q19818 N/A
    882459 8sud:A (2.1) BS01 peptide ? GO:0005737 ... P52293 38108201
    882460 8suf:C (4.0) BS01 MAN ? N/A Q9N5Z3 40588662
    882461 8sui:B (2.0) BS01 SER 2.1.2.1 GO:0004372 ... Q5SI56 37532884
    882462 8suk:C (2.45) BS01 dna N/A GO:0000976 ... A0ACD6BB06 37945601
    882463 8suk:D (2.45) BS01 dna N/A GO:0000976 ... A0ACD6BB06 37945601
    882464 8sun:A (3.12) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    882465 8sun:B (3.12) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    882466 8sun:B (3.12) BS02 CA ? GO:0002407 ... Q6P9J9 37573365
    882467 8sun:B (3.12) BS03 JRF ? GO:0002407 ... Q6P9J9 37573365
    882468 8sup:A (3.1) BS01 rna N/A N/A N/A 40568087
    882469 8sup:B (3.1) BS01 rna N/A N/A N/A 40568087
    882470 8sup:C (3.1) BS01 rna N/A N/A N/A 40568087
    882471 8sup:D (3.1) BS01 rna N/A N/A N/A 40568087
    882472 8sup:E (3.1) BS01 rna N/A N/A N/A 40568087
    882473 8sup:F (3.1) BS01 rna N/A N/A N/A 40568087
    882474 8sup:G (3.1) BS01 rna N/A N/A N/A 40568087
    882475 8sup:H (3.1) BS01 rna N/A N/A N/A 40568087
    882476 8sup:I (3.1) BS01 rna N/A N/A N/A 40568087
    882477 8sup:J (3.1) BS01 rna N/A N/A N/A 40568087
    882478 8sup:K (3.1) BS01 rna N/A N/A N/A 40568087
    882479 8sup:L (3.1) BS01 rna N/A N/A N/A 40568087
    882480 8sup:M (3.1) BS01 rna N/A N/A N/A 40568087
    882481 8sup:N (3.1) BS01 rna N/A N/A N/A 40568087
    882482 8sup:O (3.1) BS01 rna N/A N/A N/A 40568087
    882483 8sup:P (3.1) BS01 rna N/A N/A N/A 40568087
    882484 8sup:Q (3.1) BS01 rna N/A N/A N/A 40568087
    882485 8sup:Q (3.1) BS02 rna N/A N/A N/A 40568087
    882486 8sup:R (3.1) BS01 rna N/A N/A N/A 40568087
    882487 8sup:S (3.1) BS01 rna N/A N/A N/A 40568087
    882488 8sup:T (3.1) BS01 rna N/A N/A N/A 40568087
    882489 8sup:T (3.1) BS02 rna N/A N/A N/A 40568087
    882490 8sup:U (3.1) BS01 rna N/A N/A N/A 40568087
    882491 8sup:V (3.1) BS01 rna N/A N/A N/A 40568087
    882492 8sup:X (3.1) BS01 rna N/A N/A N/A 40568087
    882493 8sup:Y (3.1) BS01 rna N/A N/A N/A 40568087
    882494 8sup:Z (3.1) BS01 rna N/A N/A N/A 40568087
    882495 8sup:a (3.1) BS01 rna N/A N/A N/A 40568087
    882496 8sup:b (3.1) BS01 rna N/A N/A N/A 40568087
    882497 8sup:b (3.1) BS02 ZN N/A N/A N/A 40568087
    882498 8sup:c (3.1) BS01 rna N/A N/A N/A 40568087
    882499 8sup:d (3.1) BS01 rna N/A N/A N/A 40568087
    882500 8sup:e (3.1) BS01 rna N/A N/A N/A 40568087
    882501 8sup:f (3.1) BS01 rna N/A N/A N/A 40568087
    882502 8sup:g (3.1) BS01 rna N/A N/A N/A 40568087
    882503 8sup:h (3.1) BS01 rna N/A N/A N/A 40568087
    882504 8sup:j (3.1) BS01 rna N/A N/A N/A 40568087
    882505 8sup:j (3.1) BS02 rna N/A N/A N/A 40568087
    882506 8sup:p (3.1) BS01 rna N/A N/A N/A 40568087
    882507 8sur:A (3.1) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    882508 8sur:A (3.1) BS02 CA ? GO:0002407 ... Q6P9J9 37573365
    882509 8sur:B (3.1) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    882510 8sur:B (3.1) BS02 CA ? GO:0002407 ... Q6P9J9 37573365
    882511 8sur:B (3.1) BS03 CA ? GO:0002407 ... Q6P9J9 37573365
    882512 8sut:A (1.93) BS01 IO9 ? GO:0003824 ... O06724 38047707
    882513 8sut:A (1.93) BS02 MN ? GO:0003824 ... O06724 38047707
    882514 8sut:B (1.93) BS01 MN ? GO:0003824 ... O06724 38047707
    882515 8sut:B (1.93) BS02 IO9 ? GO:0003824 ... O06724 38047707
    882516 8suu:A (2.26) BS01 MN ? GO:0003824 ... O06724 38047707
    882517 8suu:B (2.26) BS01 MN ? GO:0003824 ... O06724 38047707
    882518 8suv:A (1.63) BS01 peptide 2.3.2.27 N/A Q9UNE7 N/A
    882519 8suv:B (1.63) BS01 peptide 2.3.2.27 N/A Q9UNE7 N/A
    882520 8suv:C (1.63) BS01 peptide 2.3.2.27 N/A Q9UNE7 N/A
    882521 8suv:D (1.63) BS01 peptide 2.3.2.27 N/A Q9UNE7 N/A
    882522 8suw:A (3.15) BS01 AR6 N/A N/A N/A 38096827
    882523 8suw:B (3.15) BS01 AR6 N/A N/A N/A 38096827
    882524 8suw:C (3.15) BS01 AR6 N/A N/A N/A 38096827
    882525 8suw:D (3.15) BS01 AR6 N/A N/A N/A 38096827
    882526 8suw:E (3.15) BS01 AR6 N/A N/A N/A 38096827
    882527 8suw:F (3.15) BS01 AR6 N/A N/A N/A 38096827
    882528 8suw:G (3.15) BS01 AR6 N/A N/A N/A 38096827
    882529 8suw:H (3.15) BS01 AR6 N/A N/A N/A 38096827
    882530 8suw:I (3.15) BS01 AR6 N/A N/A N/A 38096827
    882531 8suw:J (3.15) BS01 AR6 N/A N/A N/A 38096827
    882532 8suw:K (3.15) BS01 AR6 N/A N/A N/A 38096827
    882533 8suw:L (3.15) BS01 AR6 N/A N/A N/A 38096827
    882534 8suw:M (3.15) BS01 ADP N/A N/A N/A 38096827
    882535 8suw:M (3.15) BS02 MG N/A N/A N/A 38096827
    882536 8suw:N (3.15) BS01 ADP N/A N/A N/A 38096827
    882537 8suw:O (3.15) BS01 ADP N/A N/A N/A 38096827
    882538 8suw:O (3.15) BS02 MG N/A N/A N/A 38096827
    882539 8sux:A (2.93) BS01 ATP N/A GO:0000731 ... A0AAJ6N682 38177683
    882540 8sux:A (2.93) BS02 ATP N/A GO:0000731 ... A0AAJ6N682 38177683
    882541 8sux:B (2.93) BS01 ATP N/A GO:0000731 ... A0AAJ6N682 38177683
    882542 8sux:B (2.93) BS02 ATP N/A GO:0000731 ... A0AAJ6N682 38177683
    882543 8sux:C (2.93) BS01 ATP N/A GO:0000731 ... A0AAJ6N682 38177683
    882544 8sux:D (2.93) BS01 ATP N/A GO:0000731 ... A0AAJ6N682 38177683
    882545 8sux:E (2.93) BS01 ATP N/A GO:0000731 ... A0AAJ6N682 38177683
    882546 8sux:F (2.93) BS01 ATP N/A GO:0000731 ... A0AAJ6N682 38177683
    882547 8suy:B (3.38) BS01 M7G N/A GO:0000184 ... P52298 39282949
    882548 8sv0:B (2.2) BS01 peptide ? GO:0005737 ... P52293 38261399
    882549 8sv0:B (2.2) BS02 peptide ? GO:0005737 ... P52293 38261399
    882550 8sv2:A (1.84) BS01 C5P ? N/A Q15KI8 N/A
    882551 8sv3:A (1.51) BS01 dna 3.1.26.4 GO:0003676 ... Q9KEI9 37694722
    882552 8sv3:A (1.51) BS02 MG 3.1.26.4 GO:0003676 ... Q9KEI9 37694722
    882553 8sv4:A (2.3) BS01 dna 3.1.26.4 GO:0003676 ... Q9KEI9 37694722
    882554 8sv4:A (2.3) BS02 dna 3.1.26.4 GO:0003676 ... Q9KEI9 37694722
    882555 8sv4:A (2.3) BS03 FWN 3.1.26.4 GO:0003676 ... Q9KEI9 37694722
    882556 8sv5:A (2.16) BS01 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882557 8sv5:A (2.16) BS02 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882558 8sv5:B (2.16) BS01 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882559 8sv5:B (2.16) BS02 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882560 8sv5:C (2.16) BS01 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882561 8sv5:C (2.16) BS02 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882562 8sv5:D (2.16) BS01 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882563 8sv5:D (2.16) BS02 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882564 8sv5:E (2.16) BS01 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882565 8sv5:E (2.16) BS02 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882566 8sv5:F (2.16) BS01 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882567 8sv5:F (2.16) BS02 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882568 8sv5:G (2.16) BS01 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882569 8sv5:G (2.16) BS02 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882570 8sv5:H (2.16) BS01 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882571 8sv5:H (2.16) BS02 PH2 4.1.2.25 GO:0004150 ... A0A6L7HSV1 N/A
    882572 8sv8:A (3.38) BS01 AMP 6.2.1.- GO:0005515 ... P41226 37553340
    882573 8sv9:A (2.3) BS01 WXH 2.7.11.1 GO:0004672 ... O75385 38232465
    882574 8sv9:B (2.3) BS01 WXH 2.7.11.1 GO:0004672 ... O75385 38232465
    882575 8sva:A (2.96) BS01 dna ? GO:0003677 ... A0A2S8J6Y8 37945601
    882576 8sva:A (2.96) BS02 dna ? GO:0003677 ... A0A2S8J6Y8 37945601
    882577 8sva:F (2.96) BS01 dna ? GO:0003677 ... A0A2S8J6Y8 37945601
    882578 8sva:G (2.96) BS01 dna ? GO:0003677 ... A0A2S8J6Y8 37945601
    882579 8sva:G (2.96) BS02 dna ? GO:0003677 ... A0A2S8J6Y8 37945601
    882580 8sva:T (2.96) BS01 dna ? GO:0003677 ... A0A2S8J6Y8 37945601
    882581 8sva:T (2.96) BS02 dna ? GO:0003677 ... A0A2S8J6Y8 37945601
    882582 8svc:A (1.59) BS01 ZN ? GO:0007155 ... A0A4S7G0W1 38249299
    882583 8svd:A (3.49) BS01 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882584 8svd:A (3.49) BS02 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882585 8svd:E (3.49) BS01 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882586 8svd:E (3.49) BS02 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882587 8svd:F (3.49) BS01 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882588 8svd:G (3.49) BS01 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882589 8svd:G (3.49) BS02 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882590 8svd:I (3.49) BS01 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882591 8svd:I (3.49) BS02 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882592 8svd:J (3.49) BS01 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882593 8svd:J (3.49) BS02 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882594 8svd:K (3.49) BS01 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882595 8svd:K (3.49) BS02 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882596 8svd:T (3.49) BS01 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882597 8svd:T (3.49) BS02 dna N/A GO:0000976 ... A0AAJ6N6K2 37945601
    882598 8svf:A (3.2) BS01 dna ? GO:0000786 ... P84233 37556531
    882599 8svf:A (3.2) BS02 dna ? GO:0000786 ... P84233 37556531
    882600 8svf:B (3.2) BS01 dna ? GO:0000786 ... P62799 37556531

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).