SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    882801 8swz:A (3.0) BS01 UHB 2.4.2.- GO:0003950 ... Q9UKK3 37971310
    882802 8swz:B (3.0) BS01 UHB 2.4.2.- GO:0003950 ... Q9UKK3 37971310
    882803 8sx0:B (1.65) BS01 CA ? N/A P12255 N/A
    882804 8sx2:A (2.95) BS01 UHB 2.4.2.- GO:0003950 ... Q9UKK3 37971310
    882805 8sx2:B (2.95) BS01 UHB 2.4.2.- GO:0003950 ... Q9UKK3 37971310
    882806 8sx4:A (1.986) BS01 WXL ? GO:0003723 ... P06730 37471629
    882807 8sx4:B (1.986) BS01 M7G ? GO:0003723 ... P06730 37471629
    882808 8sx7:A (2.7) BS01 ZWY ? GO:0005524 ... A0AAA9T569 38216659
    882809 8sx8:A (3.5) BS01 XPG ? GO:0005524 ... A0AAA9T569 38216659
    882810 8sxb:A (2.9) BS01 P2E ? GO:0005524 ... A0A6P5CNW8 38216659
    882811 8sxd:A (2.59) BS01 WXU 1.1.1.86 GO:0000287 ... Q9PHN5 N/A
    882812 8sxd:A (2.59) BS02 MG 1.1.1.86 GO:0000287 ... Q9PHN5 N/A
    882813 8sxd:A (2.59) BS03 NDP 1.1.1.86 GO:0000287 ... Q9PHN5 N/A
    882814 8sxe:A (3.55) BS01 peptide ? GO:0004175 ... Q9HU50 38467832
    882815 8sxe:B (3.55) BS01 peptide ? GO:0004175 ... Q9HU50 38467832
    882816 8sxf:A (3.92) BS01 peptide ? GO:0004175 ... Q9HU50 38467832
    882817 8sxg:A (4.14) BS01 peptide ? GO:0004175 ... Q9HU50 38467832
    882818 8sxh:A (3.94) BS01 peptide ? GO:0004175 ... Q9HU50 38467832
    882819 8sxh:E (3.94) BS01 peptide ? GO:0004175 ... Q9HU50 38467832
    882820 8sxh:I (3.94) BS01 peptide ? GO:0004175 ... Q9HU50 38467832
    882821 8sxn:C (4.04) BS01 7YN 3.6.4.- N/A Q96P20 N/A
    882822 8sxn:C (4.04) BS02 ATP 3.6.4.- N/A Q96P20 N/A
    882823 8sxn:D (4.04) BS01 7YN 3.6.4.- N/A Q96P20 N/A
    882824 8sxn:D (4.04) BS02 ATP 3.6.4.- N/A Q96P20 N/A
    882825 8sxr:A (2.114) BS01 WZK 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 37555275
    882826 8sxr:B (2.114) BS01 WZK 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0DTD1 37555275
    882827 8sxt:A (3.3) BS01 dna 2.7.7.49
    3.1.21.-    		 GO:0003824 ... O00370 38096902
    882828 8sxt:A (3.3) BS02 rna 2.7.7.49
    3.1.21.-    		 GO:0003824 ... O00370 38096902
    882829 8sxt:A (3.3) BS03 TTP 2.7.7.49
    3.1.21.-    		 GO:0003824 ... O00370 38096902
    882830 8sxt:A (3.3) BS04 MG 2.7.7.49
    3.1.21.-    		 GO:0003824 ... O00370 38096902
    882831 8sxu:A (3.66) BS01 rna 2.7.7.49
    3.1.21.-    		 GO:0003824 ... O00370 38096902
    882832 8sxx:A (3.6) BS01 NAD N/A N/A N/A 38096827
    882833 8sxx:B (3.6) BS01 NAD N/A N/A N/A 38096827
    882834 8sxx:C (3.6) BS01 NAD N/A N/A N/A 38096827
    882835 8sxx:D (3.6) BS01 NAD N/A N/A N/A 38096827
    882836 8sxx:E (3.6) BS01 NAD N/A N/A N/A 38096827
    882837 8sxx:F (3.6) BS01 NAD N/A N/A N/A 38096827
    882838 8sxx:G (3.6) BS01 NAD N/A N/A N/A 38096827
    882839 8sxx:H (3.6) BS01 NAD N/A N/A N/A 38096827
    882840 8sxx:I (3.6) BS01 NAD N/A N/A N/A 38096827
    882841 8sxx:J (3.6) BS01 NAD N/A N/A N/A 38096827
    882842 8sxx:K (3.6) BS01 NAD N/A N/A N/A 38096827
    882843 8sxx:L (3.6) BS01 NAD N/A N/A N/A 38096827
    882844 8sxy:A (1.8) BS01 MJ3 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882845 8sxy:B (1.8) BS01 MJ3 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882846 8sxz:b (3.26) BS01 GDP 3.6.5.5 GO:0003924 ... Q05193 38663399
    882847 8sxz:b (3.26) BS02 MG 3.6.5.5 GO:0003924 ... Q05193 38663399
    882848 8sxz:c (3.26) BS01 GDP 3.6.5.5 GO:0003924 ... Q05193 38663399
    882849 8sxz:c (3.26) BS02 MG 3.6.5.5 GO:0003924 ... Q05193 38663399
    882850 8sxz:f (3.26) BS01 GDP 3.6.5.5 GO:0003924 ... Q05193 38663399
    882851 8sxz:f (3.26) BS02 MG 3.6.5.5 GO:0003924 ... Q05193 38663399
    882852 8sxz:g (3.26) BS01 GDP 3.6.5.5 GO:0003924 ... Q05193 38663399
    882853 8sxz:g (3.26) BS02 MG 3.6.5.5 GO:0003924 ... Q05193 38663399
    882854 8sy0:A (2.1) BS01 MJ3 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882855 8sy0:B (2.1) BS01 MJ3 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882856 8sy3:A (3.2) BS01 CU ? N/A A0A445DYW3 38355722
    882857 8sy3:B (3.2) BS01 CU ? N/A A0A445DYW3 38355722
    882858 8sy5:I (2.7) BS01 rna 2.7.7.6 GO:0000345 ... P0A8V2 38086811
    882859 8sy5:J (2.7) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882860 8sy5:J (2.7) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882861 8sy5:J (2.7) BS03 MG 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882862 8sy5:J (2.7) BS04 X0F 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882863 8sy6:I (3.28) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 38086811
    882864 8sy6:I (3.28) BS02 rna 2.7.7.6 GO:0000345 ... P0A8V2 38086811
    882865 8sy6:I (3.28) BS03 UTP 2.7.7.6 GO:0000345 ... P0A8V2 38086811
    882866 8sy6:J (3.28) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882867 8sy6:J (3.28) BS02 rna 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882868 8sy6:J (3.28) BS03 DG 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882869 8sy6:J (3.28) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882870 8sy6:J (3.28) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882871 8sy6:J (3.28) BS06 MG 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882872 8sy6:J (3.28) BS07 UTP 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882873 8sy7:I (2.65) BS01 rna 2.7.7.6 GO:0000345 ... P0A8V2 38086811
    882874 8sy7:I (2.65) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 38086811
    882875 8sy7:I (2.65) BS03 X0O 2.7.7.6 GO:0000345 ... P0A8V2 38086811
    882876 8sy7:J (2.65) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882877 8sy7:J (2.65) BS02 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882878 8sy7:J (2.65) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882879 8sy7:J (2.65) BS04 MG 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882880 8sy7:J (2.65) BS05 X0O 2.7.7.6 GO:0000287 ... P0A8T7 38086811
    882881 8sy9:A (2.2) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882882 8sy9:A (2.2) BS02 UDP 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882883 8sy9:B (2.2) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882884 8sy9:B (2.2) BS02 UD1 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882885 8sya:A (2.3) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882886 8sya:B (2.3) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882887 8sya:B (2.3) BS02 UDP 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882888 8syb:A (2.2) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882889 8syb:A (2.2) BS02 UD1 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882890 8syb:B (2.2) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882891 8syb:B (2.2) BS02 UD1 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882892 8syc:A (2.7) BS01 MG 3.1.4.17 GO:0004114 ... Q13370 38284310
    882893 8syc:A (2.7) BS02 X5W 3.1.4.17 GO:0004114 ... Q13370 38284310
    882894 8syc:D (2.7) BS01 MG 3.1.4.17 GO:0004114 ... Q13370 38284310
    882895 8syc:D (2.7) BS02 X5W 3.1.4.17 GO:0004114 ... Q13370 38284310
    882896 8syd:A (2.2) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882897 8syd:A (2.2) BS02 UD1 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882898 8syd:B (2.2) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882899 8syd:B (2.2) BS02 UD1 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882900 8sye:A (1.9) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882901 8sye:A (1.9) BS02 UDP 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882902 8sye:B (1.9) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882903 8sye:B (1.9) BS02 UDP 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882904 8syh:A (2.0) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882905 8syh:A (2.0) BS02 UDP 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882906 8syh:B (2.0) BS01 MJL 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882907 8syh:B (2.0) BS02 UDP 5.1.3.14 GO:0003824 ... Q72KY0 37660908
    882908 8syi:C (2.94) BS01 dna 2.7.7.6 GO:0003677 ... Q31N17 38354263
    882909 8syi:C (2.94) BS02 rna 2.7.7.6 GO:0003677 ... Q31N17 38354263
    882910 8syi:C (2.94) BS03 dna 2.7.7.6 GO:0003677 ... Q31N17 38354263
    882911 8syi:D (2.94) BS01 dna 2.7.7.6 GO:0000287 ... P42079 38354263
    882912 8syi:D (2.94) BS02 rna 2.7.7.6 GO:0000287 ... P42079 38354263
    882913 8syi:D (2.94) BS03 dna 2.7.7.6 GO:0000287 ... P42079 38354263
    882914 8syi:D (2.94) BS04 MG 2.7.7.6 GO:0000287 ... P42079 38354263
    882915 8syi:D (2.94) BS05 ZN 2.7.7.6 GO:0000287 ... P42079 38354263
    882916 8syi:G (2.94) BS01 dna ? GO:0005829 ... Q31QK2 38354263
    882917 8syi:Z (2.94) BS01 dna 2.7.7.6 GO:0003677 ... Q31N15 38354263
    882918 8syi:Z (2.94) BS02 ZN 2.7.7.6 GO:0003677 ... Q31N15 38354263
    882919 8syl:1 (2.9) BS01 rna ? GO:0000027 ... P0A7M6 37537169
    882920 8syl:2 (2.9) BS01 rna ? GO:0000027 ... P0AG51 37537169
    882921 8syl:2 (2.9) BS02 rna ? GO:0000027 ... P0AG51 37537169
    882922 8syl:3 (2.9) BS01 rna ? GO:0002181 ... P0A7M9 37537169
    882923 8syl:3 (2.9) BS02 ZN ? GO:0002181 ... P0A7M9 37537169
    882924 8syl:4 (2.9) BS01 rna ? GO:0000027 ... P0A7N4 37537169
    882925 8syl:5 (2.9) BS01 rna ? GO:0000027 ... P0A7N9 37537169
    882926 8syl:6 (2.9) BS01 rna ? GO:0002181 ... P0A7P5 37537169
    882927 8syl:7 (2.9) BS01 rna ? GO:0002181 ... P0A7Q1 37537169
    882928 8syl:8 (2.9) BS01 rna ? GO:0002181 ... P0A7Q6 37537169
    882929 8syl:8 (2.9) BS02 ZN ? GO:0002181 ... P0A7Q6 37537169
    882930 8syl:C (2.9) BS01 rna ? GO:0000027 ... P60422 37537169
    882931 8syl:C (2.9) BS02 rna ? GO:0000027 ... P60422 37537169
    882932 8syl:C (2.9) BS03 MG ? GO:0000027 ... P60422 37537169
    882933 8syl:D (2.9) BS01 rna ? GO:0000027 ... P60438 37537169
    882934 8syl:E (2.9) BS01 rna ? GO:0001070 ... P60723 37537169
    882935 8syl:F (2.9) BS01 rna ? GO:0000027 ... P62399 37537169
    882936 8syl:F (2.9) BS02 rna ? GO:0000027 ... P62399 37537169
    882937 8syl:F (2.9) BS03 rna ? GO:0000027 ... P62399 37537169
    882938 8syl:G (2.9) BS01 rna ? GO:0000027 ... P0AG55 37537169
    882939 8syl:H (2.9) BS01 rna ? GO:0002181 ... P0A7R1 37537169
    882940 8syl:L (2.9) BS01 rna ? GO:0002181 ... P0AA10 37537169
    882941 8syl:M (2.9) BS01 rna ? GO:0002181 ... P0ADY3 37537169
    882942 8syl:M (2.9) BS02 rna ? GO:0002181 ... P0ADY3 37537169
    882943 8syl:N (2.9) BS01 rna ? GO:0002181 ... P02413 37537169
    882944 8syl:O (2.9) BS01 rna ? GO:0000027 ... P0ADY7 37537169
    882945 8syl:O (2.9) BS02 rna ? GO:0000027 ... P0ADY7 37537169
    882946 8syl:O (2.9) BS03 rna ? GO:0000027 ... P0ADY7 37537169
    882947 8syl:P (2.9) BS01 rna ? GO:0000027 ... P0AG44 37537169
    882948 8syl:Q (2.9) BS01 rna ? GO:0002181 ... P0C018 37537169
    882949 8syl:Q (2.9) BS02 rna ? GO:0002181 ... P0C018 37537169
    882950 8syl:R (2.9) BS01 rna ? GO:0000027 ... P0A7K6 37537169
    882951 8syl:R (2.9) BS02 rna ? GO:0000027 ... P0A7K6 37537169
    882952 8syl:S (2.9) BS01 rna ? GO:0000027 ... P0A7L3 37537169
    882953 8syl:T (2.9) BS01 rna ? GO:0002181 ... P0AG48 37537169
    882954 8syl:U (2.9) BS01 rna ? GO:0002181 ... P61175 37537169
    882955 8syl:V (2.9) BS01 rna ? GO:0000027 ... P0ADZ0 37537169
    882956 8syl:W (2.9) BS01 rna ? GO:0000027 ... P60624 37537169
    882957 8syl:X (2.9) BS01 rna ? GO:0000027 ... P68919 37537169
    882958 8syl:Y (2.9) BS01 rna ? GO:0000027 ... P0A7L8 37537169
    882959 8syl:Y (2.9) BS02 rna ? GO:0000027 ... P0A7L8 37537169
    882960 8syl:Y (2.9) BS03 rna ? GO:0000027 ... P0A7L8 37537169
    882961 8syl:Z (2.9) BS01 rna ? GO:0000027 ... P0A7M2 37537169
    882962 8syl:b (2.9) BS01 rna ? GO:0000028 ... P0A7V0 37537169
    882963 8syl:c (2.9) BS01 rna ? GO:0000028 ... P0A7V3 37537169
    882964 8syl:d (2.9) BS01 rna ? GO:0000028 ... P0A7V8 37537169
    882965 8syl:e (2.9) BS01 rna ? GO:0000028 ... P0A7W1 37537169
    882966 8syl:f (2.9) BS01 rna ? GO:0002181 ... P02358 37537169
    882967 8syl:g (2.9) BS01 rna ? GO:0003723 ... P02359 37537169
    882968 8syl:g (2.9) BS02 rna ? GO:0003723 ... P02359 37537169
    882969 8syl:h (2.9) BS01 rna ? GO:0000028 ... P0A7W7 37537169
    882970 8syl:i (2.9) BS01 rna ? GO:0002181 ... P0A7X3 37537169
    882971 8syl:i (2.9) BS02 rna ? GO:0002181 ... P0A7X3 37537169
    882972 8syl:j (2.9) BS01 rna ? GO:0000049 ... P0A7R5 37537169
    882973 8syl:k (2.9) BS01 rna ? GO:0002181 ... P0A7R9 37537169
    882974 8syl:l (2.9) BS01 rna ? GO:0000049 ... P0A7S3 37537169
    882975 8syl:l (2.9) BS02 rna ? GO:0000049 ... P0A7S3 37537169
    882976 8syl:m (2.9) BS01 rna ? GO:0000049 ... P0A7S9 37537169
    882977 8syl:m (2.9) BS02 rna ? GO:0000049 ... P0A7S9 37537169
    882978 8syl:n (2.9) BS01 rna ? GO:0000028 ... P0AG59 37537169
    882979 8syl:o (2.9) BS01 rna ? GO:0000028 ... P0ADZ4 37537169
    882980 8syl:o (2.9) BS02 rna ? GO:0000028 ... P0ADZ4 37537169
    882981 8syl:p (2.9) BS01 rna ? GO:0000028 ... P0A7T3 37537169
    882982 8syl:q (2.9) BS01 rna ? GO:0000028 ... P0AG63 37537169
    882983 8syl:r (2.9) BS01 rna ? GO:0002181 ... P0A7T7 37537169
    882984 8syl:s (2.9) BS01 rna ? GO:0002181 ... P0A7U3 37537169
    882985 8syl:t (2.9) BS01 rna ? GO:0000028 ... P0A7U7 37537169
    882986 8syl:u (2.9) BS01 rna ? GO:0000028 ... P68679 37537169
    882987 8syp:A (2.6) BS01 dna ? GO:0000786 ... P68431 38267599
    882988 8syp:A (2.6) BS02 dna ? GO:0000786 ... P68431 38267599
    882989 8syp:B (2.6) BS01 dna ? GO:0000781 ... P62805 38267599
    882990 8syp:B (2.6) BS02 dna ? GO:0000781 ... P62805 38267599
    882991 8syp:C (2.6) BS01 dna ? GO:0000786 ... Q16777 38267599
    882992 8syp:C (2.6) BS02 dna ? GO:0000786 ... Q16777 38267599
    882993 8syp:D (2.6) BS01 dna ? GO:0000786 ... Q16778 38267599
    882994 8syp:D (2.6) BS02 dna ? GO:0000786 ... Q16778 38267599
    882995 8syp:E (2.6) BS01 dna ? GO:0000786 ... P68431 38267599
    882996 8syp:E (2.6) BS02 dna ? GO:0000786 ... P68431 38267599
    882997 8syp:F (2.6) BS01 dna ? GO:0000781 ... P62805 38267599
    882998 8syp:F (2.6) BS02 dna ? GO:0000781 ... P62805 38267599
    882999 8syp:G (2.6) BS01 dna ? GO:0000786 ... Q16777 38267599
    883000 8syp:G (2.6) BS02 dna ? GO:0000786 ... Q16777 38267599
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).