SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    882801 8u14:G (3.9) BS01 dna ? GO:0000786 ... P04908 38242129
    882802 8u14:G (3.9) BS02 dna ? GO:0000786 ... P04908 38242129
    882803 8u14:H (3.9) BS01 dna ? GO:0000786 ... P06899 38242129
    882804 8u14:H (3.9) BS02 dna ? GO:0000786 ... P06899 38242129
    882805 8u14:K (3.9) BS01 ZN 2.3.2.27 N/A Q8IYW5 38242129
    882806 8u14:K (3.9) BS02 ZN 2.3.2.27 N/A Q8IYW5 38242129
    882807 8u15:A (2.95) BS01 ZN ? N/A Q96SW2 38086859
    882808 8u15:A (2.95) BS02 8W7 ? N/A Q96SW2 38086859
    882809 8u15:C (2.95) BS01 8W7 ? N/A Q9UJQ4 38086859
    882810 8u15:C (2.95) BS02 ZN ? N/A Q9UJQ4 38086859
    882811 8u15:C (2.95) BS03 ZN ? N/A Q9UJQ4 38086859
    882812 8u15:D (2.95) BS01 ZN ? N/A Q96SW2 38086859
    882813 8u15:D (2.95) BS02 8W7 ? N/A Q96SW2 38086859
    882814 8u15:F (2.95) BS01 8W7 ? N/A Q9UJQ4 38086859
    882815 8u15:F (2.95) BS02 ZN ? N/A Q9UJQ4 38086859
    882816 8u15:F (2.95) BS03 ZN ? N/A Q9UJQ4 38086859
    882817 8u16:A (2.9) BS01 ZN ? N/A Q96SW2 38086859
    882818 8u16:A (2.9) BS02 Y70 ? N/A Q96SW2 38086859
    882819 8u16:C (2.9) BS01 Y70 ? N/A Q9UJQ4 38086859
    882820 8u16:C (2.9) BS02 ZN ? N/A Q9UJQ4 38086859
    882821 8u16:C (2.9) BS03 ZN ? N/A Q9UJQ4 38086859
    882822 8u16:D (2.9) BS01 ZN ? N/A Q96SW2 38086859
    882823 8u16:D (2.9) BS02 Y70 ? N/A Q96SW2 38086859
    882824 8u16:F (2.9) BS01 Y70 ? N/A Q9UJQ4 38086859
    882825 8u16:F (2.9) BS02 ZN ? N/A Q9UJQ4 38086859
    882826 8u16:F (2.9) BS03 ZN ? N/A Q9UJQ4 38086859
    882827 8u17:A (3.1) BS01 ZN ? N/A Q96SW2 38086859
    882828 8u17:A (3.1) BS02 Y70 ? N/A Q96SW2 38086859
    882829 8u17:C (3.1) BS01 Y70 ? N/A Q9UJQ4 38086859
    882830 8u17:C (3.1) BS02 ZN ? N/A Q9UJQ4 38086859
    882831 8u17:C (3.1) BS03 ZN ? N/A Q9UJQ4 38086859
    882832 8u17:D (3.1) BS01 ZN ? N/A Q96SW2 38086859
    882833 8u17:D (3.1) BS02 Y70 ? N/A Q96SW2 38086859
    882834 8u17:F (3.1) BS01 Y70 ? N/A Q9UJQ4 38086859
    882835 8u17:F (3.1) BS02 ZN ? N/A Q9UJQ4 38086859
    882836 8u17:F (3.1) BS03 ZN ? N/A Q9UJQ4 38086859
    882837 8u19:A (1.26) BS01 HEM N/A GO:0004497 ... N/A N/A
    882838 8u19:A (1.26) BS02 3DM N/A GO:0004497 ... N/A N/A
    882839 8u1f:A (3.33) BS01 UIM 2.7.10.1 GO:0004672 ... P21802 38300868
    882840 8u1f:B (3.33) BS01 UIM 2.7.10.1 GO:0004672 ... P21802 38300868
    882841 8u1h:A (3.0) BS01 ANP N/A GO:0005524 ... P09219 39428050
    882842 8u1h:B (3.0) BS01 ANP N/A GO:0005524 ... P09219 39428050
    882843 8u1h:B (3.0) BS02 ANP N/A GO:0005524 ... P09219 39428050
    882844 8u1h:C (3.0) BS01 ANP N/A GO:0005524 ... P09219 39428050
    882845 8u1h:D (3.0) BS01 ADP N/A GO:0005515 ... P07677 39428050
    882846 8u1h:F (3.0) BS01 ANP N/A GO:0005515 ... P07677 39428050
    882847 8u1h:F (3.0) BS02 MG N/A GO:0005515 ... P07677 39428050
    882848 8u1i:A (1.12) BS01 HEM N/A GO:0004497 ... N/A N/A
    882849 8u1i:A (1.12) BS02 UB9 N/A GO:0004497 ... N/A N/A
    882850 8u1l:A (3.7) BS01 ATP ? GO:0005524 ... A0A7E5VSK5 38431713
    882851 8u1l:A (3.7) BS02 MG ? GO:0005524 ... A0A7E5VSK5 38431713
    882852 8u1l:B (3.7) BS01 ATP ? GO:0005524 ... A0A7E5VSK5 38431713
    882853 8u1l:B (3.7) BS02 MG ? GO:0005524 ... A0A7E5VSK5 38431713
    882854 8u1m:A (3.5) BS01 ATP ? GO:0005524 ... A0A7E5VSK5 38431713
    882855 8u1m:A (3.5) BS02 MG ? GO:0005524 ... A0A7E5VSK5 38431713
    882856 8u1m:B (3.5) BS01 ATP ? GO:0005524 ... A0A7E5VSK5 38431713
    882857 8u1m:B (3.5) BS02 MG ? GO:0005524 ... A0A7E5VSK5 38431713
    882858 8u1n:A (3.9) BS01 ATP ? GO:0005524 ... A0A7E5VSK5 38431713
    882859 8u1n:B (3.9) BS01 ATP ? GO:0005524 ... A0A7E5VSK5 38431713
    882860 8u1w:A (1.84) BS01 FHR 3.4.22.66
    3.6.1.15
    GO:0004197 ... K4L8Z7 38005879
    882861 8u1w:A (1.84) BS02 FHR 3.4.22.66
    3.6.1.15
    GO:0004197 ... K4L8Z7 38005879
    882862 8u1x:C (2.7) BS01 MN 3.1.3.16 GO:0000159 ... P67775 38150499
    882863 8u1x:C (2.7) BS02 MN 3.1.3.16 GO:0000159 ... P67775 38150499
    882864 8u1y:A (1.74) BS01 5V9 N/A GO:0003756 ... P0AEG4 N/A
    882865 8u1y:B (1.74) BS01 CU N/A GO:0003756 ... P0AEG4 N/A
    882866 8u1z:A (1.85) BS01 peptide N/A GO:0000266 ... Q9Y3D6 N/A
    882867 8u26:R (2.5) BS01 peptide ? GO:0002118 ... P25103 37973972
    882868 8u27:A (-1.00) BS01 ULL ? GO:0042981 ... P10415
    Q07817
    37875561
    882869 8u2a:A (1.99) BS01 5N6 N/A GO:0004308 ... N/A 39251137
    882870 8u2d:A (1.95) BS01 UQX 2.7.10.2 GO:0004672 ... Q06187 38300987
    882871 8u2e:A (1.9) BS01 UP9 2.7.10.2 GO:0004672 ... Q06187 38300987
    882872 8u2m:A (1.79) BS01 peptide 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882873 8u2m:A (1.79) BS02 HEM 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882874 8u2m:A (1.79) BS03 MRY 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882875 8u2m:B (1.79) BS01 MRY 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882876 8u2m:B (1.79) BS02 HEM 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882877 8u2m:B (1.79) BS03 TFA 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882878 8u2m:B (1.79) BS04 TFA 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882879 8u2m:C (1.79) BS01 HEM 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882880 8u2m:C (1.79) BS02 TFA 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882881 8u2m:C (1.79) BS03 TFA 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882882 8u2o:A (2.15) BS01 V3O 2.7.11.22 GO:0004672 ... Q8IDW1 N/A
    882883 8u2o:B (2.15) BS01 V3O 2.7.11.22 GO:0004672 ... Q8IDW1 N/A
    882884 8u2p:A (2.25) BS01 G5A 6.1.1.14 GO:0000166 ... P9WFV7 N/A
    882885 8u2q:A (2.45) BS01 G5A 6.1.1.14 GO:0000166 ... G7CIG9 N/A
    882886 8u2q:B (2.45) BS01 ZN 6.1.1.14 GO:0000166 ... G7CIG9 N/A
    882887 8u2q:B (2.45) BS02 G5A 6.1.1.14 GO:0000166 ... G7CIG9 N/A
    882888 8u2r:A (1.55) BS01 WTA 6.2.1.1 GO:0003987 ... A4I093 39395803
    882889 8u2s:A (2.52) BS01 WTA 6.2.1.1 GO:0003987 ... A4I093 39395803
    882890 8u2s:B (2.52) BS01 WTA 6.2.1.1 GO:0003987 ... A4I093 39395803
    882891 8u2t:A (1.65) BS01 AMP 6.2.1.1 GO:0003987 ... A4I093 39395803
    882892 8u2t:A (1.65) BS02 COA 6.2.1.1 GO:0003987 ... A4I093 39395803
    882893 8u2u:A (1.97) BS01 AMP 6.2.1.1 GO:0003987 ... A4I093 39395803
    882894 8u2u:A (1.97) BS02 COA 6.2.1.1 GO:0003987 ... A4I093 39395803
    882895 8u2w:A (2.35) BS01 NAP N/A GO:0004345 ... N/A N/A
    882896 8u2w:B (2.35) BS01 NAP N/A GO:0004345 ... N/A N/A
    882897 8u2y:B (-1.00) BS01 peptide N/A N/A O14686 38579707
    882898 8u2y:B (-1.00) BS02 ZN N/A N/A O14686 38579707
    882899 8u2y:B (-1.00) BS03 ZN N/A N/A O14686 38579707
    882900 8u2z:A (3.6) BS01 PIO ? GO:0005216 ... O35433 38698206
    882901 8u2z:A (3.6) BS02 CLR ? GO:0005216 ... O35433 38698206
    882902 8u2z:A (3.6) BS03 CLR ? GO:0005216 ... O35433 38698206
    882903 8u2z:A (3.6) BS04 PIO ? GO:0005216 ... O35433 38698206
    882904 8u2z:B (3.6) BS01 CLR ? GO:0005216 ... O35433 38698206
    882905 8u2z:B (3.6) BS02 PIO ? GO:0005216 ... O35433 38698206
    882906 8u2z:B (3.6) BS03 CLR ? GO:0005216 ... O35433 38698206
    882907 8u2z:B (3.6) BS04 PIO ? GO:0005216 ... O35433 38698206
    882908 8u2z:C (3.6) BS01 PIO ? GO:0005216 ... O35433 38698206
    882909 8u2z:C (3.6) BS02 CLR ? GO:0005216 ... O35433 38698206
    882910 8u2z:C (3.6) BS03 CLR ? GO:0005216 ... O35433 38698206
    882911 8u2z:C (3.6) BS04 PIO ? GO:0005216 ... O35433 38698206
    882912 8u2z:D (3.6) BS01 PIO ? GO:0005216 ... O35433 38698206
    882913 8u2z:D (3.6) BS02 CLR ? GO:0005216 ... O35433 38698206
    882914 8u2z:D (3.6) BS03 PIO ? GO:0005216 ... O35433 38698206
    882915 8u2z:D (3.6) BS04 CLR ? GO:0005216 ... O35433 38698206
    882916 8u30:A (3.0) BS01 PIO ? GO:0000122 ... O35433 38698206
    882917 8u30:B (3.0) BS01 PIO ? GO:0000122 ... O35433 38698206
    882918 8u30:C (3.0) BS01 PIO ? GO:0000122 ... O35433 38698206
    882919 8u30:D (3.0) BS01 PIO ? GO:0000122 ... O35433 38698206
    882920 8u36:A (2.6) BS01 peptide ? GO:0005737 ... P52293 39301720
    882921 8u36:A (2.6) BS02 peptide ? GO:0005737 ... P52293 39301720
    882922 8u37:A (2.48) BS01 V5U 2.7.11.13 GO:0004672 ... P17252 38198520
    882923 8u3a:A (2.3) BS01 VPN ? GO:0005216 ... O35433 38698206
    882924 8u3a:D (2.3) BS01 VPN ? GO:0005216 ... O35433 38698206
    882925 8u3b:A (3.23) BS01 dna 2.7.7.6 GO:0000345 ... P0A7Z4 38197271
    882926 8u3b:C (3.23) BS01 dna 2.7.7.6 GO:0000345 ... P0A8V2 38197271
    882927 8u3b:C (3.23) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 38197271
    882928 8u3b:C (3.23) BS03 rna 2.7.7.6 GO:0000345 ... P0A8V2 38197271
    882929 8u3b:D (3.23) BS01 dna 2.7.7.6 GO:0000287 ... P0A8T7 38197271
    882930 8u3b:D (3.23) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 38197271
    882931 8u3b:D (3.23) BS03 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38197271
    882932 8u3b:D (3.23) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38197271
    882933 8u3b:D (3.23) BS05 MG 2.7.7.6 GO:0000287 ... P0A8T7 38197271
    882934 8u3b:F (3.23) BS01 dna ? GO:0000345 ... P00579 38197271
    882935 8u3b:F (3.23) BS02 dna ? GO:0000345 ... P00579 38197271
    882936 8u3b:G (3.23) BS01 dna ? GO:0003677 ... P0AF28 38197271
    882937 8u3b:G (3.23) BS02 dna ? GO:0003677 ... P0AF28 38197271
    882938 8u3b:H (3.23) BS01 dna ? GO:0003677 ... P0AF28 38197271
    882939 8u3b:H (3.23) BS02 dna ? GO:0003677 ... P0AF28 38197271
    882940 8u3c:A (2.3) BS01 VPN ? GO:0000122 ... O35433 38698206
    882941 8u3c:A (2.3) BS02 3PH ? GO:0000122 ... O35433 38698206
    882942 8u3c:D (2.3) BS01 3PH ? GO:0000122 ... O35433 38698206
    882943 8u3g:A (3.42) BS01 ASP ? GO:0005351 ... Q9NRA2 38782953
    882944 8u3g:A (3.42) BS02 GLU ? GO:0005351 ... Q9NRA2 38782953
    882945 8u3h:A (3.67) BS01 VP1 ? GO:0005351 ... Q9NRA2 38782953
    882946 8u3h:A (3.67) BS02 LEU ? GO:0005351 ... Q9NRA2 38782953
    882947 8u3k:A (2.5) BS01 dna N/A GO:0003674 ... Q9KR72 38740055
    882948 8u3k:E (2.5) BS01 dna N/A GO:0003674 ... Q9KR73 38740055
    882949 8u3k:E (2.5) BS02 dna N/A GO:0003674 ... Q9KR73 38740055
    882950 8u3k:F (2.5) BS01 dna N/A GO:0003674 ... Q9KR72 38740055
    882951 8u3n:A (2.15) BS01 HEM 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882952 8u3n:A (2.15) BS02 BGC 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882953 8u3n:B (2.15) BS01 HEM 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882954 8u3n:B (2.15) BS02 BGC 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882955 8u3n:C (2.15) BS01 HEM 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882956 8u3n:C (2.15) BS02 BGC 1.14.-.- GO:0004497 ... A0A3E2YLT4 N/A
    882957 8u3o:A (1.88) BS01 O69 N/A GO:0008233 ... A0A7U3H5H9 N/A
    882958 8u3o:B (1.88) BS01 O69 N/A GO:0008233 ... A0A7U3H5H9 N/A
    882959 8u3p:A (1.79) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    882960 8u3p:B (1.79) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    882961 8u3p:C (1.79) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    882962 8u3p:D (1.79) BS01 HEM N/A GO:0004096 ... P9WIE5 39300819
    882963 8u3y:A (3.1) BS01 rna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    882964 8u3y:A (3.1) BS02 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    882965 8u3y:A (3.1) BS03 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    882966 8u3y:A (3.1) BS04 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    882967 8u3y:A (3.1) BS05 MG 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    882968 8u3y:A (3.1) BS06 MG 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    882969 8u3y:A (3.1) BS07 MG 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    882970 8u3z:A (3.6) BS01 GTP 3.6.5.- GO:0000226 ... P68363 38658656
    882971 8u3z:A (3.6) BS02 MG 3.6.5.- GO:0000226 ... P68363 38658656
    882972 8u3z:B (3.6) BS01 G2P ? GO:0000226 ... P07437 38658656
    882973 8u3z:E (3.6) BS01 G2P ? GO:0000226 ... P07437 38658656
    882974 8u3z:E (3.6) BS02 MG ? GO:0000226 ... P07437 38658656
    882975 8u3z:F (3.6) BS01 GTP 3.6.5.- GO:0000226 ... P68363 38658656
    882976 8u3z:N (3.6) BS01 ATP 6.3.2.- GO:0001578 ... A4Q9E8 38658656
    882977 8u41:A (2.72) BS01 FE N/A GO:0046872 ... A0A9X4Y9G9 39143299
    882978 8u41:A (2.72) BS02 HIS N/A GO:0046872 ... A0A9X4Y9G9 39143299
    882979 8u41:B (2.72) BS01 FE N/A GO:0046872 ... A0A9X4Y9G9 39143299
    882980 8u41:B (2.72) BS02 HIS N/A GO:0046872 ... A0A9X4Y9G9 39143299
    882981 8u42:A (2.0) BS01 FE N/A GO:0046872 ... A0A9X4Y9G9 39143299
    882982 8u42:B (2.0) BS01 FE N/A GO:0046872 ... A0A9X4Y9G9 39143299
    882983 8u43:A (2.4) BS01 V5H ? GO:0005216 ... O35433 38698206
    882984 8u43:B (2.4) BS01 V5H ? GO:0005216 ... O35433 38698206
    882985 8u43:C (2.4) BS01 V5H ? GO:0005216 ... O35433 38698206
    882986 8u43:D (2.4) BS01 V5H ? GO:0005216 ... O35433 38698206
    882987 8u45:C (2.1) BS01 CA 3.4.21.63 GO:0004252 ... P28296 37864071
    882988 8u48:A (1.9) BS01 BMA ? GO:0005975 ... Q8A889 38879612
    882989 8u48:A (1.9) BS02 MAN ? GO:0005975 ... Q8A889 38879612
    882990 8u48:A (1.9) BS03 MAN ? GO:0005975 ... Q8A889 38879612
    882991 8u48:A (1.9) BS04 MAN ? GO:0005975 ... Q8A889 38879612
    882992 8u48:A (1.9) BS05 MAN ? GO:0005975 ... Q8A889 38879612
    882993 8u48:A (1.9) BS06 MAN ? GO:0005975 ... Q8A889 38879612
    882994 8u48:B (1.9) BS01 BMA ? GO:0005975 ... Q8A889 38879612
    882995 8u48:B (1.9) BS02 MAN ? GO:0005975 ... Q8A889 38879612
    882996 8u48:B (1.9) BS03 MAN ? GO:0005975 ... Q8A889 38879612
    882997 8u48:B (1.9) BS04 MAN ? GO:0005975 ... Q8A889 38879612
    882998 8u48:B (1.9) BS05 MAN ? GO:0005975 ... Q8A889 38879612
    882999 8u48:B (1.9) BS06 MAN ? GO:0005975 ... Q8A889 38879612
    883000 8u49:A (1.8) BS01 CA 3.2.1.4 GO:0004553 ... Q65JI9 38286536

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).