SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    883201 8t0s:A (1.95) BS01 peptide 2.3.2.23 GO:0000209 ... P60604 N/A
    883202 8t0t:A (1.75) BS01 Y6E 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0001523 ... P00352 38364885
    883203 8t0v:B (3.0) BS01 B12 N/A GO:0003824 ... Q8RBT2 N/A
    883204 8t0v:D (3.0) BS01 B12 N/A GO:0031419 ... Q8RBT3 N/A
    883205 8t0v:D (3.0) BS02 X6I N/A GO:0031419 ... Q8RBT3 N/A
    883206 8t0w:A (1.75) BS01 FMN N/A GO:0008726 ... Q3KC85 39531498
    883207 8t0w:A (1.75) BS02 XZ5 N/A GO:0008726 ... Q3KC85 39531498
    883208 8t0w:B (1.75) BS01 FMN N/A GO:0008726 ... Q3KC85 39531498
    883209 8t0w:B (1.75) BS02 XZ5 N/A GO:0008726 ... Q3KC85 39531498
    883210 8t0w:C (1.75) BS01 FMN N/A GO:0008726 ... Q3KC85 39531498
    883211 8t0w:C (1.75) BS02 XZ5 N/A GO:0008726 ... Q3KC85 39531498
    883212 8t0w:D (1.75) BS01 FMN N/A GO:0008726 ... Q3KC85 39531498
    883213 8t0w:D (1.75) BS02 XZ5 N/A GO:0008726 ... Q3KC85 39531498
    883214 8t0w:E (1.75) BS01 FMN N/A GO:0008726 ... Q3KC85 39531498
    883215 8t0w:E (1.75) BS02 XZ5 N/A GO:0008726 ... Q3KC85 39531498
    883216 8t0w:F (1.75) BS01 FMN N/A GO:0008726 ... Q3KC85 39531498
    883217 8t0w:F (1.75) BS02 XZ5 N/A GO:0008726 ... Q3KC85 39531498
    883218 8t0w:G (1.75) BS01 FMN N/A GO:0008726 ... Q3KC85 39531498
    883219 8t0w:G (1.75) BS02 XZ5 N/A GO:0008726 ... Q3KC85 39531498
    883220 8t0w:H (1.75) BS01 FMN N/A GO:0008726 ... Q3KC85 39531498
    883221 8t0w:H (1.75) BS02 XZ5 N/A GO:0008726 ... Q3KC85 39531498
    883222 8t0y:A (3.5) BS01 8IJ ? GO:0001774 ... O35433 38698206
    883223 8t0y:B (3.5) BS01 8IJ ? GO:0001774 ... O35433 38698206
    883224 8t0y:C (3.5) BS01 NKN ? GO:0001774 ... O35433 38698206
    883225 8t0y:C (3.5) BS02 8IJ ? GO:0001774 ... O35433 38698206
    883226 8t0y:D (3.5) BS01 NKN ? GO:0001774 ... O35433 38698206
    883227 8t0z:A (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883228 8t0z:B (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883229 8t0z:C (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883230 8t0z:D (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883231 8t0z:E (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883232 8t0z:F (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883233 8t0z:G (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883234 8t0z:H (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883235 8t0z:I (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883236 8t0z:J (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883237 8t0z:K (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883238 8t0z:L (3.3) BS01 GLN 3.5.1.2 GO:0004359 ... Q9UI32 38438397
    883239 8t10:A (3.7) BS01 NKN ? GO:0001774 ... O35433 38698206
    883240 8t10:B (3.7) BS01 8IJ ? GO:0001774 ... O35433 38698206
    883241 8t10:B (3.7) BS02 NKN ? GO:0001774 ... O35433 38698206
    883242 8t10:C (3.7) BS01 NKN ? GO:0001774 ... O35433 38698206
    883243 8t10:D (3.7) BS01 NKN ? GO:0001774 ... O35433 38698206
    883244 8t10:D (3.7) BS02 8IJ ? GO:0001774 ... O35433 38698206
    883245 8t11:A (2.91) BS01 dna N/A GO:0003677 ... O95948 39426953
    883246 8t11:A (2.91) BS02 dna N/A GO:0003677 ... O95948 39426953
    883247 8t12:B (3.34) BS01 ZN 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q91H74 38195857
    883248 8t12:B (3.34) BS02 ZN 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q91H74 38195857
    883249 8t13:B (3.45) BS01 ZN 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q91H74 38195857
    883250 8t13:B (3.45) BS02 ZN 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... Q91H74 38195857
    883251 8t14:A (3.18) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    883252 8t14:B (3.18) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    883253 8t14:C (3.18) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    883254 8t14:D (3.18) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    883255 8t14:E (3.18) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    883256 8t14:F (3.18) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    883257 8t14:G (3.18) BS01 ADP ? GO:0005524 ... Q9CZP5 38821922
    883258 8t19:A (1.23) BS01 peptide ? N/A U5Q0A7 N/A
    883259 8t19:A (1.23) BS02 MG ? N/A U5Q0A7 N/A
    883260 8t1b:A (3.0) BS01 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883261 8t1b:A (3.0) BS02 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883262 8t1b:A (3.0) BS03 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883263 8t1b:A (3.0) BS04 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883264 8t1b:A (3.0) BS05 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883265 8t1b:A (3.0) BS06 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883266 8t1b:A (3.0) BS07 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883267 8t1b:A (3.0) BS08 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883268 8t1b:A (3.0) BS09 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883269 8t1b:A (3.0) BS10 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883270 8t1b:A (3.0) BS11 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883271 8t1b:B (3.0) BS01 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883272 8t1b:B (3.0) BS02 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883273 8t1b:B (3.0) BS03 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883274 8t1b:B (3.0) BS04 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883275 8t1b:B (3.0) BS05 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883276 8t1b:B (3.0) BS06 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883277 8t1b:B (3.0) BS07 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883278 8t1b:B (3.0) BS08 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883279 8t1b:B (3.0) BS09 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883280 8t1b:B (3.0) BS10 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883281 8t1b:B (3.0) BS11 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883282 8t1b:B (3.0) BS12 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883283 8t1b:C (3.0) BS01 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883284 8t1b:C (3.0) BS02 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883285 8t1b:C (3.0) BS03 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883286 8t1b:C (3.0) BS04 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883287 8t1b:C (3.0) BS05 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883288 8t1b:C (3.0) BS06 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883289 8t1b:C (3.0) BS07 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883290 8t1b:C (3.0) BS08 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883291 8t1b:C (3.0) BS09 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883292 8t1b:C (3.0) BS10 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883293 8t1b:C (3.0) BS11 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883294 8t1b:D (3.0) BS01 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883295 8t1b:D (3.0) BS02 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883296 8t1b:D (3.0) BS03 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883297 8t1b:D (3.0) BS04 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883298 8t1b:D (3.0) BS05 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883299 8t1b:D (3.0) BS06 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883300 8t1b:D (3.0) BS07 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883301 8t1b:D (3.0) BS08 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883302 8t1b:D (3.0) BS09 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883303 8t1b:D (3.0) BS10 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883304 8t1b:D (3.0) BS11 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883305 8t1c:E (3.49) BS01 GDP 3.6.5.2 GO:0000281 ... P61586 37353478
    883306 8t1d:A (3.35) BS01 XS9 ? GO:0000122 ... Q9HBA0 37353478
    883307 8t1d:B (3.35) BS01 XS9 ? GO:0000122 ... Q9HBA0 37353478
    883308 8t1d:C (3.35) BS01 XS9 ? GO:0000122 ... Q9HBA0 37353478
    883309 8t1d:D (3.35) BS01 XS9 ? GO:0000122 ... Q9HBA0 37353478
    883310 8t1e:A (2.77) BS01 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883311 8t1e:A (2.77) BS02 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883312 8t1e:A (2.77) BS03 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883313 8t1e:A (2.77) BS04 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883314 8t1e:A (2.77) BS05 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883315 8t1e:A (2.77) BS06 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883316 8t1e:A (2.77) BS07 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883317 8t1e:A (2.77) BS08 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883318 8t1e:B (2.77) BS01 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883319 8t1e:B (2.77) BS02 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883320 8t1e:B (2.77) BS03 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883321 8t1e:B (2.77) BS04 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883322 8t1e:B (2.77) BS05 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883323 8t1e:B (2.77) BS06 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883324 8t1e:B (2.77) BS07 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883325 8t1e:B (2.77) BS08 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883326 8t1e:B (2.77) BS09 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883327 8t1e:C (2.77) BS01 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883328 8t1e:C (2.77) BS02 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883329 8t1e:C (2.77) BS03 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883330 8t1e:C (2.77) BS04 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883331 8t1e:C (2.77) BS05 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883332 8t1e:C (2.77) BS06 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883333 8t1e:C (2.77) BS07 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883334 8t1e:C (2.77) BS08 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883335 8t1e:C (2.77) BS09 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883336 8t1e:D (2.77) BS01 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883337 8t1e:D (2.77) BS02 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883338 8t1e:D (2.77) BS03 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883339 8t1e:D (2.77) BS04 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883340 8t1e:D (2.77) BS05 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883341 8t1e:D (2.77) BS06 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883342 8t1e:D (2.77) BS07 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883343 8t1e:D (2.77) BS08 9ZR ? GO:0000122 ... Q9HBA0 37353478
    883344 8t1e:D (2.77) BS09 YJ0 ? GO:0000122 ... Q9HBA0 37353478
    883345 8t1f:A (3.49) BS01 X7N ? GO:0000122 ... Q9HBA0 37353478
    883346 8t1f:B (3.49) BS01 X7N ? GO:0000122 ... Q9HBA0 37353478
    883347 8t1f:C (3.49) BS01 X7N ? GO:0000122 ... Q9HBA0 37353478
    883348 8t1f:D (3.49) BS01 X7N ? GO:0000122 ... Q9HBA0 37353478
    883349 8t1j:A (2.7) BS01 ZN 1.14.13.39 GO:0001666 ... P29476 37979917
    883350 8t1j:A (2.7) BS02 ARG 1.14.13.39 GO:0001666 ... P29476 37979917
    883351 8t1j:A (2.7) BS03 H4B 1.14.13.39 GO:0001666 ... P29476 37979917
    883352 8t1j:A (2.7) BS04 HEM 1.14.13.39 GO:0001666 ... P29476 37979917
    883353 8t1j:B (2.7) BS01 H4B 1.14.13.39 GO:0001666 ... P29476 37979917
    883354 8t1j:B (2.7) BS02 ARG 1.14.13.39 GO:0001666 ... P29476 37979917
    883355 8t1j:B (2.7) BS03 H4B 1.14.13.39 GO:0001666 ... P29476 37979917
    883356 8t1j:B (2.7) BS04 HEM 1.14.13.39 GO:0001666 ... P29476 37979917
    883357 8t1k:A (3.14) BS01 ZN 1.14.13.39 GO:0001666 ... P29476 37979917
    883358 8t1k:A (3.14) BS02 ARG 1.14.13.39 GO:0001666 ... P29476 37979917
    883359 8t1k:A (3.14) BS03 H4B 1.14.13.39 GO:0001666 ... P29476 37979917
    883360 8t1k:A (3.14) BS04 HEM 1.14.13.39 GO:0001666 ... P29476 37979917
    883361 8t1k:A (3.14) BS05 H4B 1.14.13.39 GO:0001666 ... P29476 37979917
    883362 8t1k:B (3.14) BS01 H4B 1.14.13.39 GO:0001666 ... P29476 37979917
    883363 8t1k:B (3.14) BS02 ARG 1.14.13.39 GO:0001666 ... P29476 37979917
    883364 8t1k:B (3.14) BS03 H4B 1.14.13.39 GO:0001666 ... P29476 37979917
    883365 8t1k:B (3.14) BS04 HEM 1.14.13.39 GO:0001666 ... P29476 37979917
    883366 8t1l:C (4.83) BS01 peptide N/A GO:0000151 ... Q921D4 38955181
    883367 8t1o:A (3.3) BS01 PIO ? GO:0005794 ... P17427 37364761
    883368 8t1o:M (3.3) BS01 peptide ? GO:0002092 ... P84091 37364761
    883369 8t1p:C (2.96) BS01 ATP 7.6.2.- GO:0005524 ... O07550 37938578
    883370 8t1p:C (2.96) BS02 MG 7.6.2.- GO:0005524 ... O07550 37938578
    883371 8t1p:C (2.96) BS03 AOV 7.6.2.- GO:0005524 ... O07550 37938578
    883372 8t1p:D (2.96) BS01 ATP 7.6.2.- GO:0005524 ... O07549 37938578
    883373 8t1p:D (2.96) BS02 AOV 7.6.2.- GO:0005524 ... O07549 37938578
    883374 8t1p:D (2.96) BS03 MG 7.6.2.- GO:0005524 ... O07549 37938578
    883375 8t1q:A (1.7) BS01 XYX 3.1.27.- N/A Q9UKF6 37967558
    883376 8t1q:A (1.7) BS02 FE 3.1.27.- N/A Q9UKF6 37967558
    883377 8t1q:A (1.7) BS03 FE 3.1.27.- N/A Q9UKF6 37967558
    883378 8t1r:A (2.2) BS01 XZC 3.1.27.- N/A Q9UKF6 37967558
    883379 8t1r:A (2.2) BS02 FE 3.1.27.- N/A Q9UKF6 37967558
    883380 8t1r:A (2.2) BS03 FE 3.1.27.- N/A Q9UKF6 37967558
    883381 8t1s:A (2.0) BS01 SAH ? GO:0008168 ... Q8EGW3 37799586
    883382 8t1s:A (2.0) BS02 ZN ? GO:0008168 ... Q8EGW3 37799586
    883383 8t1s:C (2.0) BS01 ZN ? GO:0008168 ... Q8EGW3 37799586
    883384 8t1s:C (2.0) BS02 SAH ? GO:0008168 ... Q8EGW3 37799586
    883385 8t1t:A (1.55) BS01 SAM ? GO:0008168 ... Q8EGW3 37799586
    883386 8t1t:A (1.55) BS02 ZN ? GO:0008168 ... Q8EGW3 37799586
    883387 8t1t:C (1.55) BS01 SAM ? GO:0008168 ... Q8EGW3 37799586
    883388 8t1t:C (1.55) BS02 ZN ? GO:0008168 ... Q8EGW3 37799586
    883389 8t1u:A (2.91) BS01 dna 2.1.1.37 GO:0008168 ... Q9M548 37926286
    883390 8t1u:A (2.91) BS02 dna 2.1.1.37 GO:0008168 ... Q9M548 37926286
    883391 8t1u:A (2.91) BS03 SAH 2.1.1.37 GO:0008168 ... Q9M548 37926286
    883392 8t1v:A (2.6) BS01 XY8 N/A GO:0004930 ... P0ABE7
    P46095
    39626010
    883393 8t1w:A (3.49) BS01 X7T N/A GO:0004930 ... P0ABE7
    P46095
    39626010
    883394 8t1y:A (2.14) BS01 DAN 3.2.1.18 GO:0004308 ... Q7MX62 37747935
    883395 8t1z:A (1.93) BS01 SIA 3.2.1.18 GO:0004308 ... Q7MX62 37747935
    883396 8t24:A (2.29) BS01 FUD 3.2.1.18 GO:0004308 ... Q7MX62 37747935
    883397 8t26:A (1.42) BS01 SIA 3.2.1.18 GO:0004308 ... Q7MX62 37747935
    883398 8t27:A (1.41) BS01 SIA 3.2.1.18 GO:0004308 ... Q7MX62 37747935
    883399 8t27:A (1.41) BS02 GAL 3.2.1.18 GO:0004308 ... Q7MX62 37747935
    883400 8t27:A (1.41) BS03 GAL 3.2.1.18 GO:0004308 ... Q7MX62 37747935

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).