SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    884801 8ud7:2F (2.55) BS03 MG ? GO:0003735 ... Q5SHN9 38359125
    884802 8ud7:2F (2.55) BS04 MG ? GO:0003735 ... Q5SHN9 38359125
    884803 8ud7:2G (2.55) BS01 rna ? GO:0000049 ... Q5SHQ0 38359125
    884804 8ud7:2G (2.55) BS02 rna ? GO:0000049 ... Q5SHQ0 38359125
    884805 8ud7:2G (2.55) BS03 rna ? GO:0000049 ... Q5SHQ0 38359125
    884806 8ud7:2G (2.55) BS04 MG ? GO:0000049 ... Q5SHQ0 38359125
    884807 8ud7:2H (2.55) BS01 rna ? GO:0002181 ... P0DOY8 38359125
    884808 8ud7:2I (2.55) BS01 rna ? GO:0003735 ... Q5SLQ1 38359125
    884809 8ud7:2N (2.55) BS01 rna ? GO:0003729 ... P60488 38359125
    884810 8ud7:2O (2.55) BS01 rna ? GO:0003735 ... Q5SHP8 38359125
    884811 8ud7:2O (2.55) BS02 rna ? GO:0003735 ... Q5SHP8 38359125
    884812 8ud7:2P (2.55) BS01 rna ? GO:0003735 ... Q5SHQ7 38359125
    884813 8ud7:2Q (2.55) BS01 rna ? GO:0000049 ... P60489 38359125
    884814 8ud7:2Q (2.55) BS02 rna ? GO:0000049 ... P60489 38359125
    884815 8ud7:2Q (2.55) BS03 rna ? GO:0000049 ... P60489 38359125
    884816 8ud7:2Q (2.55) BS04 MG ? GO:0000049 ... P60489 38359125
    884817 8ud7:2Q (2.55) BS05 MG ? GO:0000049 ... P60489 38359125
    884818 8ud7:2Q (2.55) BS06 MG ? GO:0000049 ... P60489 38359125
    884819 8ud7:2R (2.55) BS01 rna ? GO:0003735 ... Q9Z9H5 38359125
    884820 8ud7:2S (2.55) BS01 rna ? GO:0003735 ... Q5SHQ4 38359125
    884821 8ud7:2S (2.55) BS02 rna ? GO:0003735 ... Q5SHQ4 38359125
    884822 8ud7:2T (2.55) BS01 rna ? GO:0003735 ... P60490 38359125
    884823 8ud7:2T (2.55) BS02 rna ? GO:0003735 ... P60490 38359125
    884824 8ud7:2U (2.55) BS01 rna ? GO:0000027 ... P60491 38359125
    884825 8ud7:2U (2.55) BS02 MG ? GO:0000027 ... P60491 38359125
    884826 8ud7:2V (2.55) BS01 rna ? GO:0003723 ... P60492 38359125
    884827 8ud7:2V (2.55) BS02 MG ? GO:0003723 ... P60492 38359125
    884828 8ud7:2W (2.55) BS01 rna ? GO:0003735 ... Q5SHP3 38359125
    884829 8ud7:2W (2.55) BS02 MG ? GO:0003735 ... Q5SHP3 38359125
    884830 8ud7:2W (2.55) BS03 MG ? GO:0003735 ... Q5SHP3 38359125
    884831 8ud7:2X (2.55) BS01 rna ? GO:0003735 ... Q5SHP0 38359125
    884832 8ud7:2X (2.55) BS02 MG ? GO:0003735 ... Q5SHP0 38359125
    884833 8ud7:2Y (2.55) BS01 rna ? GO:0003723 ... Q5SHP9 38359125
    884834 8ud7:2Y (2.55) BS02 ZN ? GO:0003723 ... Q5SHP9 38359125
    884835 8ud7:2Z (2.55) BS01 rna ? GO:0003723 ... Q5SHZ1 38359125
    884836 8ud7:2Z (2.55) BS02 rna ? GO:0003723 ... Q5SHZ1 38359125
    884837 8ud7:2b (2.55) BS01 rna ? GO:0003735 ... P80371 38359125
    884838 8ud7:2c (2.55) BS01 rna ? GO:0003676 ... P80372 38359125
    884839 8ud7:2d (2.55) BS01 rna ? GO:0003723 ... P80373 38359125
    884840 8ud7:2d (2.55) BS02 SF4 ? GO:0003723 ... P80373 38359125
    884841 8ud7:2e (2.55) BS01 rna ? GO:0003723 ... Q5SHQ5 38359125
    884842 8ud7:2e (2.55) BS02 MG ? GO:0003723 ... Q5SHQ5 38359125
    884843 8ud7:2f (2.55) BS01 rna ? GO:0003735 ... Q5SLP8 38359125
    884844 8ud7:2f (2.55) BS02 MG ? GO:0003735 ... Q5SLP8 38359125
    884845 8ud7:2g (2.55) BS01 rna ? GO:0000049 ... P17291 38359125
    884846 8ud7:2g (2.55) BS02 rna ? GO:0000049 ... P17291 38359125
    884847 8ud7:2h (2.55) BS01 rna ? GO:0003735 ... P0DOY9 38359125
    884848 8ud7:2i (2.55) BS01 rna ? GO:0000049 ... P80374 38359125
    884849 8ud7:2i (2.55) BS02 rna ? GO:0000049 ... P80374 38359125
    884850 8ud7:2j (2.55) BS01 rna ? GO:0000049 ... Q5SHN7 38359125
    884851 8ud7:2k (2.55) BS01 rna ? GO:0003735 ... P80376 38359125
    884852 8ud7:2k (2.55) BS02 MG ? GO:0003735 ... P80376 38359125
    884853 8ud7:2l (2.55) BS01 rna ? GO:0000049 ... Q5SHN3 38359125
    884854 8ud7:2l (2.55) BS02 MG ? GO:0000049 ... Q5SHN3 38359125
    884855 8ud7:2l (2.55) BS03 MG ? GO:0000049 ... Q5SHN3 38359125
    884856 8ud7:2l (2.55) BS04 MG ? GO:0000049 ... Q5SHN3 38359125
    884857 8ud7:2m (2.55) BS01 rna ? GO:0000049 ... P80377 38359125
    884858 8ud7:2m (2.55) BS02 rna ? GO:0000049 ... P80377 38359125
    884859 8ud7:2m (2.55) BS03 rna ? GO:0000049 ... P80377 38359125
    884860 8ud7:2n (2.55) BS01 rna ? GO:0003735 ... P0DOY6 38359125
    884861 8ud7:2n (2.55) BS02 ZN ? GO:0003735 ... P0DOY6 38359125
    884862 8ud7:2o (2.55) BS01 rna ? GO:0003735 ... Q5SJ76 38359125
    884863 8ud7:2o (2.55) BS02 rna ? GO:0003735 ... Q5SJ76 38359125
    884864 8ud7:2p (2.55) BS01 rna ? GO:0003735 ... Q5SJH3 38359125
    884865 8ud7:2q (2.55) BS01 rna ? GO:0003735 ... P0DOY7 38359125
    884866 8ud7:2q (2.55) BS02 MG ? GO:0003735 ... P0DOY7 38359125
    884867 8ud7:2r (2.55) BS01 rna ? GO:0003735 ... Q5SLQ0 38359125
    884868 8ud7:2s (2.55) BS01 rna ? GO:0000028 ... Q5SHP2 38359125
    884869 8ud7:2t (2.55) BS01 rna ? GO:0003723 ... P80380 38359125
    884870 8ud7:2t (2.55) BS02 MG ? GO:0003723 ... P80380 38359125
    884871 8ud8:10 (2.6) BS01 rna ? GO:0003735 ... P60493 38359125
    884872 8ud8:10 (2.6) BS02 rna ? GO:0003735 ... P60493 38359125
    884873 8ud8:10 (2.6) BS03 rna ? GO:0003735 ... P60493 38359125
    884874 8ud8:10 (2.6) BS04 MG ? GO:0003735 ... P60493 38359125
    884875 8ud8:10 (2.6) BS05 MG ? GO:0003735 ... P60493 38359125
    884876 8ud8:11 (2.6) BS01 rna ? GO:0003735 ... P60494 38359125
    884877 8ud8:11 (2.6) BS02 rna ? GO:0003735 ... P60494 38359125
    884878 8ud8:11 (2.6) BS03 MG ? GO:0003735 ... P60494 38359125
    884879 8ud8:12 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 38359125
    884880 8ud8:12 (2.6) BS02 MG ? GO:0003735 ... Q5SHP6 38359125
    884881 8ud8:13 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 38359125
    884882 8ud8:13 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 38359125
    884883 8ud8:13 (2.6) BS03 MG ? GO:0003735 ... Q5SHQ6 38359125
    884884 8ud8:14 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 38359125
    884885 8ud8:14 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 38359125
    884886 8ud8:15 (2.6) BS01 rna ? GO:0003735 ... P80339 38359125
    884887 8ud8:15 (2.6) BS02 MG ? GO:0003735 ... P80339 38359125
    884888 8ud8:15 (2.6) BS03 MG ? GO:0003735 ... P80339 38359125
    884889 8ud8:15 (2.6) BS04 MG ? GO:0003735 ... P80339 38359125
    884890 8ud8:15 (2.6) BS05 ZN ? GO:0003735 ... P80339 38359125
    884891 8ud8:16 (2.6) BS01 rna ? GO:0000049 ... P35871 38359125
    884892 8ud8:16 (2.6) BS02 MG ? GO:0000049 ... P35871 38359125
    884893 8ud8:16 (2.6) BS03 ZN ? GO:0000049 ... P35871 38359125
    884894 8ud8:17 (2.6) BS01 rna ? GO:0003735 ... P80340 38359125
    884895 8ud8:17 (2.6) BS02 MG ? GO:0003735 ... P80340 38359125
    884896 8ud8:17 (2.6) BS03 MG ? GO:0003735 ... P80340 38359125
    884897 8ud8:17 (2.6) BS04 MG ? GO:0003735 ... P80340 38359125
    884898 8ud8:18 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 38359125
    884899 8ud8:18 (2.6) BS02 MG ? GO:0003735 ... Q5SKU1 38359125
    884900 8ud8:18 (2.6) BS03 MG ? GO:0003735 ... Q5SKU1 38359125
    884901 8ud8:18 (2.6) BS04 MG ? GO:0003735 ... Q5SKU1 38359125
    884902 8ud8:19 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 38359125
    884903 8ud8:19 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 38359125
    884904 8ud8:1D (2.6) BS01 rna ? GO:0002181 ... P60405 38359125
    884905 8ud8:1D (2.6) BS02 rna ? GO:0002181 ... P60405 38359125
    884906 8ud8:1D (2.6) BS03 MG ? GO:0002181 ... P60405 38359125
    884907 8ud8:1D (2.6) BS04 MG ? GO:0002181 ... P60405 38359125
    884908 8ud8:1D (2.6) BS05 MG ? GO:0002181 ... P60405 38359125
    884909 8ud8:1D (2.6) BS06 MG ? GO:0002181 ... P60405 38359125
    884910 8ud8:1D (2.6) BS07 MG ? GO:0002181 ... P60405 38359125
    884911 8ud8:1D (2.6) BS08 MG ? GO:0002181 ... P60405 38359125
    884912 8ud8:1D (2.6) BS09 MG ? GO:0002181 ... P60405 38359125
    884913 8ud8:1D (2.6) BS10 MG ? GO:0002181 ... P60405 38359125
    884914 8ud8:1D (2.6) BS11 MG ? GO:0002181 ... P60405 38359125
    884915 8ud8:1D (2.6) BS12 MG ? GO:0002181 ... P60405 38359125
    884916 8ud8:1E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 38359125
    884917 8ud8:1E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 38359125
    884918 8ud8:1E (2.6) BS03 MG ? GO:0003735 ... Q5SHN8 38359125
    884919 8ud8:1E (2.6) BS04 MG ? GO:0003735 ... Q5SHN8 38359125
    884920 8ud8:1E (2.6) BS05 MG ? GO:0003735 ... Q5SHN8 38359125
    884921 8ud8:1E (2.6) BS06 MG ? GO:0003735 ... Q5SHN8 38359125
    884922 8ud8:1F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 38359125
    884923 8ud8:1F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 38359125
    884924 8ud8:1F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 38359125
    884925 8ud8:1F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 38359125
    884926 8ud8:1F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 38359125
    884927 8ud8:1F (2.6) BS06 MG ? GO:0003735 ... Q5SHN9 38359125
    884928 8ud8:1F (2.6) BS07 MG ? GO:0003735 ... Q5SHN9 38359125
    884929 8ud8:1F (2.6) BS08 MG ? GO:0003735 ... Q5SHN9 38359125
    884930 8ud8:1F (2.6) BS09 MG ? GO:0003735 ... Q5SHN9 38359125
    884931 8ud8:1G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 38359125
    884932 8ud8:1G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 38359125
    884933 8ud8:1G (2.6) BS03 rna ? GO:0000049 ... Q5SHQ0 38359125
    884934 8ud8:1G (2.6) BS04 MG ? GO:0000049 ... Q5SHQ0 38359125
    884935 8ud8:1G (2.6) BS05 MG ? GO:0000049 ... Q5SHQ0 38359125
    884936 8ud8:1H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 38359125
    884937 8ud8:1I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 38359125
    884938 8ud8:1I (2.6) BS02 MG ? GO:0003735 ... Q5SLQ1 38359125
    884939 8ud8:1N (2.6) BS01 rna ? GO:0003729 ... P60488 38359125
    884940 8ud8:1N (2.6) BS02 MG ? GO:0003729 ... P60488 38359125
    884941 8ud8:1N (2.6) BS03 MG ? GO:0003729 ... P60488 38359125
    884942 8ud8:1N (2.6) BS04 MG ? GO:0003729 ... P60488 38359125
    884943 8ud8:1N (2.6) BS05 MG ? GO:0003729 ... P60488 38359125
    884944 8ud8:1O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 38359125
    884945 8ud8:1O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 38359125
    884946 8ud8:1O (2.6) BS03 MG ? GO:0003735 ... Q5SHP8 38359125
    884947 8ud8:1O (2.6) BS04 MG ? GO:0003735 ... Q5SHP8 38359125
    884948 8ud8:1P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 38359125
    884949 8ud8:1P (2.6) BS02 MG ? GO:0003735 ... Q5SHQ7 38359125
    884950 8ud8:1P (2.6) BS03 MG ? GO:0003735 ... Q5SHQ7 38359125
    884951 8ud8:1P (2.6) BS04 MG ? GO:0003735 ... Q5SHQ7 38359125
    884952 8ud8:1P (2.6) BS05 MG ? GO:0003735 ... Q5SHQ7 38359125
    884953 8ud8:1P (2.6) BS06 MG ? GO:0003735 ... Q5SHQ7 38359125
    884954 8ud8:1Q (2.6) BS01 rna ? GO:0000049 ... P60489 38359125
    884955 8ud8:1Q (2.6) BS02 rna ? GO:0000049 ... P60489 38359125
    884956 8ud8:1Q (2.6) BS03 rna ? GO:0000049 ... P60489 38359125
    884957 8ud8:1Q (2.6) BS04 MG ? GO:0000049 ... P60489 38359125
    884958 8ud8:1Q (2.6) BS05 MG ? GO:0000049 ... P60489 38359125
    884959 8ud8:1Q (2.6) BS06 MG ? GO:0000049 ... P60489 38359125
    884960 8ud8:1R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 38359125
    884961 8ud8:1R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 38359125
    884962 8ud8:1R (2.6) BS03 MG ? GO:0003735 ... Q9Z9H5 38359125
    884963 8ud8:1S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 38359125
    884964 8ud8:1S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 38359125
    884965 8ud8:1S (2.6) BS03 MG ? GO:0003735 ... Q5SHQ4 38359125
    884966 8ud8:1S (2.6) BS04 MG ? GO:0003735 ... Q5SHQ4 38359125
    884967 8ud8:1T (2.6) BS01 rna ? GO:0003735 ... P60490 38359125
    884968 8ud8:1T (2.6) BS02 rna ? GO:0003735 ... P60490 38359125
    884969 8ud8:1U (2.6) BS01 rna ? GO:0000027 ... P60491 38359125
    884970 8ud8:1U (2.6) BS02 MG ? GO:0000027 ... P60491 38359125
    884971 8ud8:1U (2.6) BS03 MG ? GO:0000027 ... P60491 38359125
    884972 8ud8:1U (2.6) BS04 MG ? GO:0000027 ... P60491 38359125
    884973 8ud8:1U (2.6) BS05 MG ? GO:0000027 ... P60491 38359125
    884974 8ud8:1U (2.6) BS06 MG ? GO:0000027 ... P60491 38359125
    884975 8ud8:1U (2.6) BS07 MG ? GO:0000027 ... P60491 38359125
    884976 8ud8:1U (2.6) BS08 MG ? GO:0000027 ... P60491 38359125
    884977 8ud8:1U (2.6) BS09 MG ? GO:0000027 ... P60491 38359125
    884978 8ud8:1U (2.6) BS10 MG ? GO:0000027 ... P60491 38359125
    884979 8ud8:1V (2.6) BS01 rna ? GO:0003723 ... P60492 38359125
    884980 8ud8:1V (2.6) BS02 MG ? GO:0003723 ... P60492 38359125
    884981 8ud8:1V (2.6) BS03 MG ? GO:0003723 ... P60492 38359125
    884982 8ud8:1V (2.6) BS04 MG ? GO:0003723 ... P60492 38359125
    884983 8ud8:1V (2.6) BS05 MG ? GO:0003723 ... P60492 38359125
    884984 8ud8:1V (2.6) BS06 MG ? GO:0003723 ... P60492 38359125
    884985 8ud8:1V (2.6) BS07 MG ? GO:0003723 ... P60492 38359125
    884986 8ud8:1W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 38359125
    884987 8ud8:1W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 38359125
    884988 8ud8:1W (2.6) BS03 MG ? GO:0003735 ... Q5SHP3 38359125
    884989 8ud8:1W (2.6) BS04 MG ? GO:0003735 ... Q5SHP3 38359125
    884990 8ud8:1W (2.6) BS05 MG ? GO:0003735 ... Q5SHP3 38359125
    884991 8ud8:1W (2.6) BS06 MG ? GO:0003735 ... Q5SHP3 38359125
    884992 8ud8:1X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 38359125
    884993 8ud8:1X (2.6) BS02 MG ? GO:0003735 ... Q5SHP0 38359125
    884994 8ud8:1X (2.6) BS03 MG ? GO:0003735 ... Q5SHP0 38359125
    884995 8ud8:1X (2.6) BS04 MG ? GO:0003735 ... Q5SHP0 38359125
    884996 8ud8:1Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 38359125
    884997 8ud8:1Y (2.6) BS02 MG ? GO:0003723 ... Q5SHP9 38359125
    884998 8ud8:1Y (2.6) BS03 ZN ? GO:0003723 ... Q5SHP9 38359125
    884999 8ud8:1Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 38359125
    885000 8ud8:1Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 38359125

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).