SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    885401 8t8c:1Q (2.6) BS05 MG ? GO:0003735 ... P60489 37433044
    885402 8t8c:1Q (2.6) BS06 MG ? GO:0003735 ... P60489 37433044
    885403 8t8c:1Q (2.6) BS07 MG ? GO:0003735 ... P60489 37433044
    885404 8t8c:1R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 37433044
    885405 8t8c:1R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 37433044
    885406 8t8c:1R (2.6) BS03 MG ? GO:0003735 ... Q9Z9H5 37433044
    885407 8t8c:1S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 37433044
    885408 8t8c:1S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 37433044
    885409 8t8c:1T (2.6) BS01 rna ? GO:0003735 ... P60490 37433044
    885410 8t8c:1T (2.6) BS02 rna ? GO:0003735 ... P60490 37433044
    885411 8t8c:1U (2.6) BS01 rna ? GO:0000027 ... P60491 37433044
    885412 8t8c:1U (2.6) BS02 MG ? GO:0000027 ... P60491 37433044
    885413 8t8c:1U (2.6) BS03 MG ? GO:0000027 ... P60491 37433044
    885414 8t8c:1U (2.6) BS04 MG ? GO:0000027 ... P60491 37433044
    885415 8t8c:1U (2.6) BS05 MG ? GO:0000027 ... P60491 37433044
    885416 8t8c:1U (2.6) BS06 MG ? GO:0000027 ... P60491 37433044
    885417 8t8c:1U (2.6) BS07 MG ? GO:0000027 ... P60491 37433044
    885418 8t8c:1V (2.6) BS01 rna ? GO:0003723 ... P60492 37433044
    885419 8t8c:1V (2.6) BS02 MG ? GO:0003723 ... P60492 37433044
    885420 8t8c:1V (2.6) BS03 MG ? GO:0003723 ... P60492 37433044
    885421 8t8c:1V (2.6) BS04 MG ? GO:0003723 ... P60492 37433044
    885422 8t8c:1V (2.6) BS05 MG ? GO:0003723 ... P60492 37433044
    885423 8t8c:1W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 37433044
    885424 8t8c:1W (2.6) BS02 MG ? GO:0003735 ... Q5SHP3 37433044
    885425 8t8c:1X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 37433044
    885426 8t8c:1Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 37433044
    885427 8t8c:1Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 37433044
    885428 8t8c:1Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 37433044
    885429 8t8c:1Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 37433044
    885430 8t8c:1b (2.6) BS01 rna ? GO:0003735 ... P80371 37433044
    885431 8t8c:1b (2.6) BS02 MG ? GO:0003735 ... P80371 37433044
    885432 8t8c:1c (2.6) BS01 rna ? GO:0003676 ... P80372 37433044
    885433 8t8c:1d (2.6) BS01 rna ? GO:0003723 ... P80373 37433044
    885434 8t8c:1d (2.6) BS02 SF4 ? GO:0003723 ... P80373 37433044
    885435 8t8c:1e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 37433044
    885436 8t8c:1e (2.6) BS02 MG ? GO:0003723 ... Q5SHQ5 37433044
    885437 8t8c:1f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 37433044
    885438 8t8c:1g (2.6) BS01 rna ? GO:0000049 ... P17291 37433044
    885439 8t8c:1h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 37433044
    885440 8t8c:1i (2.6) BS01 rna ? GO:0003723 ... P80374 37433044
    885441 8t8c:1j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 37433044
    885442 8t8c:1k (2.6) BS01 rna ? GO:0003735 ... P80376 37433044
    885443 8t8c:1k (2.6) BS02 MG ? GO:0003735 ... P80376 37433044
    885444 8t8c:1l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 37433044
    885445 8t8c:1l (2.6) BS02 MG ? GO:0000049 ... Q5SHN3 37433044
    885446 8t8c:1l (2.6) BS03 MG ? GO:0000049 ... Q5SHN3 37433044
    885447 8t8c:1m (2.6) BS01 rna ? GO:0000049 ... P80377 37433044
    885448 8t8c:1m (2.6) BS02 MG ? GO:0000049 ... P80377 37433044
    885449 8t8c:1n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 37433044
    885450 8t8c:1n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 37433044
    885451 8t8c:1o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 37433044
    885452 8t8c:1o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 37433044
    885453 8t8c:1p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 37433044
    885454 8t8c:1q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 37433044
    885455 8t8c:1r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 37433044
    885456 8t8c:1s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 37433044
    885457 8t8c:1t (2.6) BS01 rna ? GO:0003723 ... P80380 37433044
    885458 8t8c:1t (2.6) BS02 MG ? GO:0003723 ... P80380 37433044
    885459 8t8c:1y (2.6) BS01 rna ? GO:0005515 ... P0AD49 37433044
    885460 8t8c:1y (2.6) BS02 MG ? GO:0005515 ... P0AD49 37433044
    885461 8t8c:20 (2.6) BS01 rna ? GO:0003735 ... P60493 37433044
    885462 8t8c:20 (2.6) BS02 rna ? GO:0003735 ... P60493 37433044
    885463 8t8c:20 (2.6) BS03 MG ? GO:0003735 ... P60493 37433044
    885464 8t8c:21 (2.6) BS01 rna ? GO:0003735 ... P60494 37433044
    885465 8t8c:22 (2.6) BS01 rna ? GO:0003735 ... Q5SHP6 37433044
    885466 8t8c:23 (2.6) BS01 rna ? GO:0003735 ... Q5SHQ6 37433044
    885467 8t8c:23 (2.6) BS02 rna ? GO:0003735 ... Q5SHQ6 37433044
    885468 8t8c:24 (2.6) BS01 rna ? GO:0003735 ... Q5SJE1 37433044
    885469 8t8c:24 (2.6) BS02 ZN ? GO:0003735 ... Q5SJE1 37433044
    885470 8t8c:25 (2.6) BS01 rna ? GO:0003735 ... P80339 37433044
    885471 8t8c:25 (2.6) BS02 MG ? GO:0003735 ... P80339 37433044
    885472 8t8c:25 (2.6) BS03 MG ? GO:0003735 ... P80339 37433044
    885473 8t8c:25 (2.6) BS04 ZN ? GO:0003735 ... P80339 37433044
    885474 8t8c:26 (2.6) BS01 rna ? GO:0003735 ... P35871 37433044
    885475 8t8c:26 (2.6) BS02 ZN ? GO:0003735 ... P35871 37433044
    885476 8t8c:27 (2.6) BS01 rna ? GO:0003735 ... P80340 37433044
    885477 8t8c:27 (2.6) BS02 MG ? GO:0003735 ... P80340 37433044
    885478 8t8c:28 (2.6) BS01 rna ? GO:0003735 ... Q5SKU1 37433044
    885479 8t8c:29 (2.6) BS01 rna ? GO:0003735 ... Q5SHR2 37433044
    885480 8t8c:29 (2.6) BS02 ZN ? GO:0003735 ... Q5SHR2 37433044
    885481 8t8c:2D (2.6) BS01 rna ? GO:0002181 ... P60405 37433044
    885482 8t8c:2D (2.6) BS02 rna ? GO:0002181 ... P60405 37433044
    885483 8t8c:2D (2.6) BS03 MG ? GO:0002181 ... P60405 37433044
    885484 8t8c:2D (2.6) BS04 MG ? GO:0002181 ... P60405 37433044
    885485 8t8c:2D (2.6) BS05 MG ? GO:0002181 ... P60405 37433044
    885486 8t8c:2D (2.6) BS06 MG ? GO:0002181 ... P60405 37433044
    885487 8t8c:2D (2.6) BS07 MG ? GO:0002181 ... P60405 37433044
    885488 8t8c:2D (2.6) BS08 MG ? GO:0002181 ... P60405 37433044
    885489 8t8c:2D (2.6) BS09 MG ? GO:0002181 ... P60405 37433044
    885490 8t8c:2D (2.6) BS10 MG ? GO:0002181 ... P60405 37433044
    885491 8t8c:2E (2.6) BS01 rna ? GO:0003735 ... Q5SHN8 37433044
    885492 8t8c:2E (2.6) BS02 MG ? GO:0003735 ... Q5SHN8 37433044
    885493 8t8c:2F (2.6) BS01 rna ? GO:0003735 ... Q5SHN9 37433044
    885494 8t8c:2F (2.6) BS02 MG ? GO:0003735 ... Q5SHN9 37433044
    885495 8t8c:2F (2.6) BS03 MG ? GO:0003735 ... Q5SHN9 37433044
    885496 8t8c:2F (2.6) BS04 MG ? GO:0003735 ... Q5SHN9 37433044
    885497 8t8c:2F (2.6) BS05 MG ? GO:0003735 ... Q5SHN9 37433044
    885498 8t8c:2G (2.6) BS01 rna ? GO:0000049 ... Q5SHQ0 37433044
    885499 8t8c:2G (2.6) BS02 rna ? GO:0000049 ... Q5SHQ0 37433044
    885500 8t8c:2H (2.6) BS01 rna ? GO:0002181 ... P0DOY8 37433044
    885501 8t8c:2I (2.6) BS01 rna ? GO:0003735 ... Q5SLQ1 37433044
    885502 8t8c:2I (2.6) BS02 MG ? GO:0003735 ... Q5SLQ1 37433044
    885503 8t8c:2N (2.6) BS01 rna ? GO:0003729 ... P60488 37433044
    885504 8t8c:2O (2.6) BS01 rna ? GO:0003735 ... Q5SHP8 37433044
    885505 8t8c:2O (2.6) BS02 rna ? GO:0003735 ... Q5SHP8 37433044
    885506 8t8c:2P (2.6) BS01 rna ? GO:0003735 ... Q5SHQ7 37433044
    885507 8t8c:2Q (2.6) BS01 rna ? GO:0003735 ... P60489 37433044
    885508 8t8c:2Q (2.6) BS02 rna ? GO:0003735 ... P60489 37433044
    885509 8t8c:2Q (2.6) BS03 MG ? GO:0003735 ... P60489 37433044
    885510 8t8c:2R (2.6) BS01 rna ? GO:0003735 ... Q9Z9H5 37433044
    885511 8t8c:2R (2.6) BS02 MG ? GO:0003735 ... Q9Z9H5 37433044
    885512 8t8c:2S (2.6) BS01 rna ? GO:0003735 ... Q5SHQ4 37433044
    885513 8t8c:2S (2.6) BS02 rna ? GO:0003735 ... Q5SHQ4 37433044
    885514 8t8c:2T (2.6) BS01 rna ? GO:0003735 ... P60490 37433044
    885515 8t8c:2T (2.6) BS02 rna ? GO:0003735 ... P60490 37433044
    885516 8t8c:2U (2.6) BS01 rna ? GO:0000027 ... P60491 37433044
    885517 8t8c:2U (2.6) BS02 MG ? GO:0000027 ... P60491 37433044
    885518 8t8c:2V (2.6) BS01 rna ? GO:0003723 ... P60492 37433044
    885519 8t8c:2V (2.6) BS02 MG ? GO:0003723 ... P60492 37433044
    885520 8t8c:2V (2.6) BS03 MG ? GO:0003723 ... P60492 37433044
    885521 8t8c:2W (2.6) BS01 rna ? GO:0003735 ... Q5SHP3 37433044
    885522 8t8c:2X (2.6) BS01 rna ? GO:0003735 ... Q5SHP0 37433044
    885523 8t8c:2Y (2.6) BS01 rna ? GO:0003723 ... Q5SHP9 37433044
    885524 8t8c:2Y (2.6) BS02 ZN ? GO:0003723 ... Q5SHP9 37433044
    885525 8t8c:2Z (2.6) BS01 rna ? GO:0003723 ... Q5SHZ1 37433044
    885526 8t8c:2Z (2.6) BS02 rna ? GO:0003723 ... Q5SHZ1 37433044
    885527 8t8c:2b (2.6) BS01 rna ? GO:0003735 ... P80371 37433044
    885528 8t8c:2c (2.6) BS01 rna ? GO:0003676 ... P80372 37433044
    885529 8t8c:2d (2.6) BS01 rna ? GO:0003723 ... P80373 37433044
    885530 8t8c:2d (2.6) BS02 SF4 ? GO:0003723 ... P80373 37433044
    885531 8t8c:2e (2.6) BS01 rna ? GO:0003723 ... Q5SHQ5 37433044
    885532 8t8c:2f (2.6) BS01 rna ? GO:0003735 ... Q5SLP8 37433044
    885533 8t8c:2f (2.6) BS02 MG ? GO:0003735 ... Q5SLP8 37433044
    885534 8t8c:2g (2.6) BS01 rna ? GO:0000049 ... P17291 37433044
    885535 8t8c:2h (2.6) BS01 rna ? GO:0003735 ... P0DOY9 37433044
    885536 8t8c:2i (2.6) BS01 rna ? GO:0003723 ... P80374 37433044
    885537 8t8c:2j (2.6) BS01 rna ? GO:0000049 ... Q5SHN7 37433044
    885538 8t8c:2j (2.6) BS02 MG ? GO:0000049 ... Q5SHN7 37433044
    885539 8t8c:2k (2.6) BS01 rna ? GO:0003735 ... P80376 37433044
    885540 8t8c:2k (2.6) BS02 MG ? GO:0003735 ... P80376 37433044
    885541 8t8c:2l (2.6) BS01 rna ? GO:0000049 ... Q5SHN3 37433044
    885542 8t8c:2m (2.6) BS01 rna ? GO:0000049 ... P80377 37433044
    885543 8t8c:2n (2.6) BS01 rna ? GO:0003735 ... P0DOY6 37433044
    885544 8t8c:2n (2.6) BS02 ZN ? GO:0003735 ... P0DOY6 37433044
    885545 8t8c:2o (2.6) BS01 rna ? GO:0003735 ... Q5SJ76 37433044
    885546 8t8c:2o (2.6) BS02 rna ? GO:0003735 ... Q5SJ76 37433044
    885547 8t8c:2p (2.6) BS01 rna ? GO:0003735 ... Q5SJH3 37433044
    885548 8t8c:2q (2.6) BS01 rna ? GO:0003735 ... P0DOY7 37433044
    885549 8t8c:2r (2.6) BS01 rna ? GO:0003735 ... Q5SLQ0 37433044
    885550 8t8c:2s (2.6) BS01 rna ? GO:0000028 ... Q5SHP2 37433044
    885551 8t8c:2t (2.6) BS01 rna ? GO:0003723 ... P80380 37433044
    885552 8t8c:2t (2.6) BS02 MG ? GO:0003723 ... P80380 37433044
    885553 8t8c:2y (2.6) BS01 rna ? GO:0005515 ... P0AD49 37433044
    885554 8t8g:A (1.5) BS01 peptide ? N/A Q99ZN4 38179192
    885555 8t8m:A (3.0) BS01 QUS ? GO:0004930 ... P41594 38632403
    885556 8t8m:B (3.0) BS01 QUS ? GO:0004930 ... P41594 38632403
    885557 8t8n:A (2.32) BS01 074 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13
    N/A P27282 37515189
    885558 8t8q:A (2.27) BS01 ZJX 3.1.3.48 GO:0004725 ... Q06124 37774359
    885559 8t8q:B (2.27) BS01 ZJX 3.1.3.48 GO:0004725 ... Q06124 37774359
    885560 8t8r:A (2.87) BS01 peptide N/A GO:0016020 ... Q99523 N/A
    885561 8t8s:A (2.99) BS01 peptide N/A GO:0016020 ... Q99523 N/A
    885562 8t8s:B (2.99) BS01 peptide N/A GO:0016020 ... Q99523 N/A
    885563 8t8u:A (2.01) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885564 8t8u:A (2.01) BS02 PO4 ? GO:0000166 ... A0A3G4ZNY6 38216735
    885565 8t8v:A (1.96) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885566 8t8v:A (1.96) BS02 PO4 ? GO:0000166 ... A0A3G4ZNY6 38216735
    885567 8t8w:A (2.0) BS01 ATP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885568 8t8x:A (2.59) BS01 ANP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885569 8t8x:A (2.59) BS02 PO4 ? GO:0000166 ... A0A3G4ZNY6 38216735
    885570 8t8y:A (2.5) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885571 8t8y:A (2.5) BS02 I3P ? GO:0000166 ... A0A3G4ZNY6 38216735
    885572 8t8z:A (2.6) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885573 8t8z:A (2.6) BS02 ZNU ? GO:0000166 ... A0A3G4ZNY6 38216735
    885574 8t90:A (2.3) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885575 8t90:A (2.3) BS02 ZNZ ? GO:0000166 ... A0A3G4ZNY6 38216735
    885576 8t91:A (2.56) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885577 8t91:A (2.56) BS02 IHP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885578 8t92:A (2.3) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885579 8t92:A (2.3) BS02 XID ? GO:0000166 ... A0A3G4ZNY6 38216735
    885580 8t92:A (2.3) BS03 PO4 ? GO:0000166 ... A0A3G4ZNY6 38216735
    885581 8t93:A (1.95) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885582 8t93:A (1.95) BS02 ZNQ ? GO:0000166 ... A0A3G4ZNY6 38216735
    885583 8t94:A (2.11) BS01 MN 3.1.-.- GO:0003723 ... C3W5S0 38190441
    885584 8t94:A (2.11) BS02 MN 3.1.-.- GO:0003723 ... C3W5S0 38190441
    885585 8t94:A (2.11) BS03 IJM 3.1.-.- GO:0003723 ... C3W5S0 38190441
    885586 8t95:A (2.61) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885587 8t95:A (2.61) BS02 I4P ? GO:0000166 ... A0A3G4ZNY6 38216735
    885588 8t96:A (2.36) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885589 8t96:A (2.36) BS02 K7V ? GO:0000166 ... A0A3G4ZNY6 38216735
    885590 8t96:A (2.36) BS03 PO4 ? GO:0000166 ... A0A3G4ZNY6 38216735
    885591 8t97:A (2.46) BS01 ADP ? GO:0000166 ... A0A3G4ZNY6 38216735
    885592 8t97:A (2.46) BS02 KGN ? GO:0000166 ... A0A3G4ZNY6 38216735
    885593 8t97:A (2.46) BS03 PO4 ? GO:0000166 ... A0A3G4ZNY6 38216735
    885594 8t98:A (1.3) BS01 U6J 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    885595 8t98:A (1.3) BS02 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    885596 8t98:A (1.3) BS03 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    885597 8t99:A (1.5) BS01 ZOW 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    885598 8t99:A (1.5) BS02 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    885599 8t99:A (1.5) BS03 MG 3.6.1.10
    3.6.1.52
    3.6.1.59
    3.6.1.61
    3.6.1.62
    GO:0016462 ... O95989 38216735
    885600 8t9a:B (3.17) BS01 peptide ? GO:0005515 ... Q5T6F0 38665159

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).