SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    885601 8t9c:A (2.7) BS01 dna ? GO:0005198 ... A0AA49KFV0 39208798
    885602 8t9c:A (2.7) BS02 dna ? GO:0005198 ... A0AA49KFV0 39208798
    885603 8t9d:C (4.66) BS01 peptide N/A GO:0001223 ... O75586 38955181
    885604 8t9f:A (2.6) BS01 dna ? GO:0000786 ... P84233 37595555
    885605 8t9f:A (2.6) BS02 dna ? GO:0000786 ... P84233 37595555
    885606 8t9f:B (2.6) BS01 dna ? GO:0000786 ... P62799 37595555
    885607 8t9f:B (2.6) BS02 dna ? GO:0000786 ... P62799 37595555
    885608 8t9f:C (2.6) BS01 dna ? GO:0000786 ... P0C0S5 37595555
    885609 8t9f:C (2.6) BS02 dna ? GO:0000786 ... P0C0S5 37595555
    885610 8t9f:D (2.6) BS01 dna ? GO:0000786 ... P02281 37595555
    885611 8t9f:E (2.6) BS01 dna ? GO:0000786 ... P84233 37595555
    885612 8t9f:E (2.6) BS02 dna ? GO:0000786 ... P84233 37595555
    885613 8t9f:F (2.6) BS01 dna ? GO:0000786 ... P62799 37595555
    885614 8t9f:F (2.6) BS02 dna ? GO:0000786 ... P62799 37595555
    885615 8t9f:G (2.6) BS01 dna ? GO:0000786 ... P0C0S5 37595555
    885616 8t9f:G (2.6) BS02 dna ? GO:0000786 ... P0C0S5 37595555
    885617 8t9f:H (2.6) BS01 dna ? GO:0000786 ... P02281 37595555
    885618 8t9f:H (2.6) BS02 dna ? GO:0000786 ... P02281 37595555
    885619 8t9f:K (2.6) BS01 SAM 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 37595555
    885620 8t9g:A (6.2) BS01 dna N/A GO:0000786 ... P84233 39303719
    885621 8t9g:A (6.2) BS02 dna N/A GO:0000786 ... P84233 39303719
    885622 8t9g:C (6.2) BS01 SAH N/A GO:0006338 ... Q15910 39303719
    885623 8t9g:I (6.2) BS01 dna N/A GO:0006338 ... Q15910 39303719
    885624 8t9g:I (6.2) BS02 SAH N/A GO:0006338 ... Q15910 39303719
    885625 8t9g:J (6.2) BS01 dna N/A GO:0000786 ... P62799 39303719
    885626 8t9g:J (6.2) BS02 dna N/A GO:0000786 ... P62799 39303719
    885627 8t9g:K (6.2) BS01 peptide N/A GO:0000122 ... O75530 39303719
    885628 8t9g:R (6.2) BS01 dna N/A GO:0000786 ... P06897 39303719
    885629 8t9g:R (6.2) BS02 dna N/A GO:0000786 ... P06897 39303719
    885630 8t9g:S (6.2) BS01 dna N/A GO:0000786 ... P02281 39303719
    885631 8t9g:S (6.2) BS02 dna N/A GO:0000786 ... P02281 39303719
    885632 8t9g:U (6.2) BS01 dna N/A GO:0000786 ... P06897 39303719
    885633 8t9g:U (6.2) BS02 dna N/A GO:0000786 ... P06897 39303719
    885634 8t9g:V (6.2) BS01 dna N/A GO:0000786 ... P02281 39303719
    885635 8t9g:V (6.2) BS02 dna N/A GO:0000786 ... P02281 39303719
    885636 8t9g:W (6.2) BS01 dna N/A GO:0000786 ... P84233 39303719
    885637 8t9g:W (6.2) BS02 dna N/A GO:0000786 ... P84233 39303719
    885638 8t9g:X (6.2) BS01 dna N/A GO:0000786 ... P62799 39303719
    885639 8t9g:X (6.2) BS02 dna N/A GO:0000786 ... P62799 39303719
    885640 8t9h:A (3.37) BS01 dna ? GO:0000786 ... P84233 37595555
    885641 8t9h:A (3.37) BS02 dna ? GO:0000786 ... P84233 37595555
    885642 8t9h:B (3.37) BS01 dna ? GO:0000786 ... P62799 37595555
    885643 8t9h:B (3.37) BS02 dna ? GO:0000786 ... P62799 37595555
    885644 8t9h:C (3.37) BS01 dna ? GO:0000786 ... P06897 37595555
    885645 8t9h:C (3.37) BS02 dna ? GO:0000786 ... P06897 37595555
    885646 8t9h:D (3.37) BS01 dna ? GO:0000786 ... P02281 37595555
    885647 8t9h:E (3.37) BS01 dna ? GO:0000786 ... P84233 37595555
    885648 8t9h:E (3.37) BS02 dna ? GO:0000786 ... P84233 37595555
    885649 8t9h:F (3.37) BS01 dna ? GO:0000786 ... P62799 37595555
    885650 8t9h:F (3.37) BS02 dna ? GO:0000786 ... P62799 37595555
    885651 8t9h:G (3.37) BS01 dna ? GO:0000786 ... P06897 37595555
    885652 8t9h:H (3.37) BS01 dna ? GO:0000786 ... P02281 37595555
    885653 8t9u:F (1.47) BS01 dna ? GO:0003700 ... P17947 38042148
    885654 8t9u:F (1.47) BS02 dna ? GO:0003700 ... P17947 38042148
    885655 8t9v:A (1.945) BS01 ZJT 3.2.2.22 GO:0017148 ... P02879 38340640
    885656 8t9x:A (2.0) BS01 dna ? GO:0005198 ... A0AA49QGS8 39208798
    885657 8t9x:A (2.0) BS02 dna ? GO:0005198 ... A0AA49QGS8 39208798
    885658 8ta0:A (1.95) BS01 DQI N/A GO:0004146 ... A0PQG8 39468773
    885659 8ta0:A (1.95) BS02 NAP N/A GO:0004146 ... A0PQG8 39468773
    885660 8ta1:A (1.5) BS01 EII N/A GO:0004146 ... A0PQG8 39468773
    885661 8ta1:A (1.5) BS02 NAP N/A GO:0004146 ... A0PQG8 39468773
    885662 8ta2:A (2.74) BS01 GH6 ? GO:0005247 ... P51788 38345841
    885663 8ta2:A (2.74) BS02 CL ? GO:0005247 ... P51788 38345841
    885664 8ta2:B (2.74) BS01 GH6 ? GO:0005247 ... P51788 38345841
    885665 8ta2:B (2.74) BS02 CL ? GO:0005247 ... P51788 38345841
    885666 8tab:A (2.26) BS01 U4T 3.2.2.22 GO:0017148 ... P02879 38340640
    885667 8tac:B (2.34) BS01 dna N/A GO:0003677 ... N/A 40940539
    885668 8tac:B (2.34) BS02 dna N/A GO:0003677 ... N/A 40940539
    885669 8tad:A (2.76) BS01 ZXJ 3.2.2.22 GO:0017148 ... P02879 38340640
    885670 8taf:J (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    885671 8taf:L (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    885672 8taf:M (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    885673 8taf:N (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    885674 8taf:O (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    885675 8taf:P (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    885676 8taf:Q (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    885677 8taf:R (3.2) BS01 ZN N/A GO:0005198 ... N/A 38177118
    885678 8tag:A (3.2) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    885679 8tag:B (3.2) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    885680 8tag:B (3.2) BS02 CA ? GO:0002407 ... Q6P9J9 37573365
    885681 8tah:A (2.89) BS01 peptide ? GO:0005200 ... P61157 37898612
    885682 8tah:A (2.89) BS02 ATP ? GO:0005200 ... P61157 37898612
    885683 8tah:B (2.89) BS01 ATP ? GO:0005200 ... A7MB62 37898612
    885684 8tai:A (3.1) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    885685 8tai:B (3.1) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    885686 8tai:B (3.1) BS02 CA ? GO:0002407 ... Q6P9J9 37573365
    885687 8tal:A (3.2) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    885688 8tal:B (3.2) BS01 CA ? GO:0002407 ... Q6P9J9 37573365
    885689 8tal:B (3.2) BS02 CA ? GO:0002407 ... Q6P9J9 37573365
    885690 8tao:A (2.9) BS01 QUS ? GO:0004930 ... P41594 38632403
    885691 8tao:B (2.9) BS01 YKU ? GO:0004930 ... P41594 38632403
    885692 8tao:B (2.9) BS02 QUS ? GO:0004930 ... P41594 38632403
    885693 8tas:E (4.1) BS01 dna N/A GO:0006338 ... Q15910 39303719
    885694 8tas:E (4.1) BS02 SAH N/A GO:0006338 ... Q15910 39303719
    885695 8tas:I (4.1) BS01 dna N/A GO:0000786 ... P84233 39303719
    885696 8tas:I (4.1) BS02 dna N/A GO:0000786 ... P84233 39303719
    885697 8tas:J (4.1) BS01 dna N/A GO:0000786 ... P62799 39303719
    885698 8tas:J (4.1) BS02 dna N/A GO:0000786 ... P62799 39303719
    885699 8tas:R (4.1) BS01 dna N/A GO:0000786 ... P06897 39303719
    885700 8tas:R (4.1) BS02 dna N/A GO:0000786 ... P06897 39303719
    885701 8tas:S (4.1) BS01 dna N/A GO:0000786 ... P02281 39303719
    885702 8tas:S (4.1) BS02 dna N/A GO:0000786 ... P02281 39303719
    885703 8tas:U (4.1) BS01 dna N/A GO:0000786 ... P06897 39303719
    885704 8tas:U (4.1) BS02 dna N/A GO:0000786 ... P06897 39303719
    885705 8tas:V (4.1) BS01 dna N/A GO:0000786 ... P02281 39303719
    885706 8tas:V (4.1) BS02 dna N/A GO:0000786 ... P02281 39303719
    885707 8tas:W (4.1) BS01 dna N/A GO:0000786 ... P84233 39303719
    885708 8tas:W (4.1) BS02 dna N/A GO:0000786 ... P84233 39303719
    885709 8tas:X (4.1) BS01 dna N/A GO:0000786 ... P62799 39303719
    885710 8tas:X (4.1) BS02 dna N/A GO:0000786 ... P62799 39303719
    885711 8tat:A (1.6) BS01 GFX 3.2.1.17 GO:0003796 ... A0A7S9SVX7 38357006
    885712 8tat:A (1.6) BS02 GFX 3.2.1.17 GO:0003796 ... A0A7S9SVX7 38357006
    885713 8tav:A (1.39) BS01 ZKR N/A GO:0016020 ... Q2G025 40447595
    885714 8tav:A (1.39) BS02 ZKR N/A GO:0016020 ... Q2G025 40447595
    885715 8tav:A (1.39) BS03 ZKR N/A GO:0016020 ... Q2G025 40447595
    885716 8tav:A (1.39) BS04 CA N/A GO:0016020 ... Q2G025 40447595
    885717 8tav:A (1.39) BS05 CA N/A GO:0016020 ... Q2G025 40447595
    885718 8taw:A (1.73) BS01 HEM ? GO:0004497 ... Q2IU02 37837941
    885719 8taw:A (1.73) BS02 PQS ? GO:0004497 ... Q2IU02 37837941
    885720 8tay:A (2.021) BS01 EJD ? GO:0004497 ... Q2IU02 37837941
    885721 8tay:A (2.021) BS02 HEM ? GO:0004497 ... Q2IU02 37837941
    885722 8tb2:A (1.88) BS01 CA ? N/A Q8NUV0 38568806
    885723 8tb5:A (2.32) BS01 ZOQ 2.7.10.2 GO:0004672 ... P29597 37823891
    885724 8tb5:B (2.32) BS01 ZOQ 2.7.10.2 GO:0004672 ... P29597 37823891
    885725 8tb6:A (1.96) BS01 ZOI 2.7.10.2 GO:0004672 ... P29597 37823891
    885726 8tb6:B (1.96) BS01 ZOI 2.7.10.2 GO:0004672 ... P29597 37823891
    885727 8tb7:R (2.94) BS01 ZOB ? GO:0004930 ... P0ABE7
    Q9BZJ8
    37741852
    885728 8tb9:A (4.0) BS01 dna N/A GO:0000785 ... P07305 39303719
    885729 8tb9:A (4.0) BS02 dna N/A GO:0000785 ... P07305 39303719
    885730 8tb9:D (4.0) BS01 peptide N/A N/A Q15022 39303719
    885731 8tb9:E (4.0) BS01 dna N/A GO:0006338 ... Q15910 39303719
    885732 8tb9:E (4.0) BS02 SAH N/A GO:0006338 ... Q15910 39303719
    885733 8tb9:I (4.0) BS01 dna N/A GO:0000786 ... P84233 39303719
    885734 8tb9:I (4.0) BS02 dna N/A GO:0000786 ... P84233 39303719
    885735 8tb9:J (4.0) BS01 dna N/A GO:0000786 ... P62799 39303719
    885736 8tb9:R (4.0) BS01 dna N/A GO:0000786 ... P06897 39303719
    885737 8tb9:R (4.0) BS02 dna N/A GO:0000786 ... P06897 39303719
    885738 8tb9:S (4.0) BS01 dna N/A GO:0000786 ... P02281 39303719
    885739 8tb9:S (4.0) BS02 dna N/A GO:0000786 ... P02281 39303719
    885740 8tb9:U (4.0) BS01 dna N/A GO:0000786 ... P06897 39303719
    885741 8tb9:U (4.0) BS02 dna N/A GO:0000786 ... P06897 39303719
    885742 8tb9:V (4.0) BS01 dna N/A GO:0000786 ... P02281 39303719
    885743 8tb9:V (4.0) BS02 dna N/A GO:0000786 ... P02281 39303719
    885744 8tb9:W (4.0) BS01 dna N/A GO:0000786 ... P84233 39303719
    885745 8tb9:W (4.0) BS02 dna N/A GO:0000786 ... P84233 39303719
    885746 8tb9:X (4.0) BS01 dna N/A GO:0000786 ... P62799 39303719
    885747 8tb9:X (4.0) BS02 dna N/A GO:0000786 ... P62799 39303719
    885748 8tba:A (1.65) BS01 ZMX N/A GO:0008881 ... Q9ZLT0 N/A
    885749 8tba:A (1.65) BS02 DGL N/A GO:0008881 ... Q9ZLT0 N/A
    885750 8tba:B (1.65) BS01 DGL N/A GO:0008881 ... Q9ZLT0 N/A
    885751 8tbe:A (2.15) BS01 ZQB 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37800975
    885752 8tbe:B (2.15) BS01 ZQB 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37800975
    885753 8tbf:A (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    885754 8tbf:A (1.5) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    885755 8tbf:A (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    885756 8tbf:B (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    885757 8tbf:B (1.5) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    885758 8tbf:B (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    885759 8tbf:C (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885760 8tbf:D (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885761 8tbg:A (1.2) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 38589574
    885762 8tbg:A (1.2) BS02 MG 3.6.5.2 GO:0003924 ... P01112 38589574
    885763 8tbg:A (1.2) BS03 ZNI 3.6.5.2 GO:0003924 ... P01112 38589574
    885764 8tbg:B (1.2) BS01 GNP 3.6.5.2 GO:0003924 ... P01112 38589574
    885765 8tbg:B (1.2) BS02 MG 3.6.5.2 GO:0003924 ... P01112 38589574
    885766 8tbg:B (1.2) BS03 ZNI 3.6.5.2 GO:0003924 ... P01112 38589574
    885767 8tbg:C (1.2) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885768 8tbg:D (1.2) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885769 8tbh:A (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    885770 8tbh:A (1.5) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    885771 8tbh:A (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    885772 8tbh:B (1.5) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    885773 8tbh:B (1.5) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    885774 8tbh:B (1.5) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    885775 8tbh:C (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885776 8tbh:D (1.5) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885777 8tbi:A (1.59) BS01 GNP 3.6.5.2 GO:0000139 ... P01111 38589574
    885778 8tbi:A (1.59) BS02 MG 3.6.5.2 GO:0000139 ... P01111 38589574
    885779 8tbi:A (1.59) BS03 ZNI 3.6.5.2 GO:0000139 ... P01111 38589574
    885780 8tbi:B (1.59) BS01 GNP 3.6.5.2 GO:0000139 ... P01111 38589574
    885781 8tbi:B (1.59) BS02 MG 3.6.5.2 GO:0000139 ... P01111 38589574
    885782 8tbi:B (1.59) BS03 ZNI 3.6.5.2 GO:0000139 ... P01111 38589574
    885783 8tbi:C (1.59) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885784 8tbi:D (1.59) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885785 8tbj:A (1.45) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    885786 8tbj:A (1.45) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    885787 8tbj:A (1.45) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    885788 8tbj:B (1.45) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    885789 8tbj:B (1.45) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    885790 8tbj:B (1.45) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    885791 8tbj:C (1.45) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885792 8tbj:D (1.45) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885793 8tbk:A (1.26) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    885794 8tbk:A (1.26) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    885795 8tbk:A (1.26) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    885796 8tbk:B (1.26) BS01 GNP 3.6.5.2 GO:0003924 ... P01116 38589574
    885797 8tbk:B (1.26) BS02 MG 3.6.5.2 GO:0003924 ... P01116 38589574
    885798 8tbk:B (1.26) BS03 ZNI 3.6.5.2 GO:0003924 ... P01116 38589574
    885799 8tbk:C (1.26) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574
    885800 8tbk:D (1.26) BS01 ZNI 5.2.1.8 GO:0000413 ... P62937 38589574

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).