SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    886601 8uk4:A (3.02) BS02 dna 2.7.7.7 GO:0003684 ... Q9Y253 38413007
    886602 8uk4:A (3.02) BS03 1FZ 2.7.7.7 GO:0003684 ... Q9Y253 38413007
    886603 8uk4:A (3.02) BS04 MG 2.7.7.7 GO:0003684 ... Q9Y253 38413007
    886604 8uk5:A (1.4) BS01 peptide ? N/A Q9ULI0 38733345
    886605 8uk6:A (2.73) BS01 ZN 6.1.1.18 GO:0000166 ... A0A1D8PQM9 38402621
    886606 8uk6:A (2.73) BS02 WVK 6.1.1.18 GO:0000166 ... A0A1D8PQM9 38402621
    886607 8uk9:A (3.1) BS01 dna ? GO:0003677 ... P04527 38177685
    886608 8uk9:B (3.1) BS01 dna 3.6.4.- GO:0003677 ... P04526 38177685
    886609 8uk9:B (3.1) BS02 AF3 3.6.4.- GO:0003677 ... P04526 38177685
    886610 8uk9:B (3.1) BS03 ADP 3.6.4.- GO:0003677 ... P04526 38177685
    886611 8uk9:B (3.1) BS04 MG 3.6.4.- GO:0003677 ... P04526 38177685
    886612 8uk9:C (3.1) BS01 dna 3.6.4.- GO:0003677 ... P04526 38177685
    886613 8uk9:C (3.1) BS02 MG 3.6.4.- GO:0003677 ... P04526 38177685
    886614 8uk9:C (3.1) BS03 AF3 3.6.4.- GO:0003677 ... P04526 38177685
    886615 8uk9:C (3.1) BS04 ADP 3.6.4.- GO:0003677 ... P04526 38177685
    886616 8uk9:D (3.1) BS01 dna 3.6.4.- GO:0003677 ... P04526 38177685
    886617 8uk9:D (3.1) BS02 MG 3.6.4.- GO:0003677 ... P04526 38177685
    886618 8uk9:D (3.1) BS03 AF3 3.6.4.- GO:0003677 ... P04526 38177685
    886619 8uk9:D (3.1) BS04 ADP 3.6.4.- GO:0003677 ... P04526 38177685
    886620 8uk9:E (3.1) BS01 dna 3.6.4.- GO:0003677 ... P04526 38177685
    886621 8uk9:E (3.1) BS02 ADP 3.6.4.- GO:0003677 ... P04526 38177685
    886622 8uk9:K (3.1) BS01 dna 3.6.4.- GO:0003677 ... P04526 38177685
    886623 8uk9:K (3.1) BS02 MG 3.6.4.- GO:0003677 ... P04526 38177685
    886624 8uk9:K (3.1) BS03 AF3 3.6.4.- GO:0003677 ... P04526 38177685
    886625 8uk9:K (3.1) BS04 ADP 3.6.4.- GO:0003677 ... P04526 38177685
    886626 8uk9:L (3.1) BS01 dna 3.6.4.- GO:0003677 ... P04526 38177685
    886627 8uk9:L (3.1) BS02 MG 3.6.4.- GO:0003677 ... P04526 38177685
    886628 8uk9:L (3.1) BS03 AF3 3.6.4.- GO:0003677 ... P04526 38177685
    886629 8uk9:L (3.1) BS04 ADP 3.6.4.- GO:0003677 ... P04526 38177685
    886630 8uk9:M (3.1) BS01 dna 3.6.4.- GO:0003677 ... P04526 38177685
    886631 8uk9:M (3.1) BS02 MG 3.6.4.- GO:0003677 ... P04526 38177685
    886632 8uk9:M (3.1) BS03 AF3 3.6.4.- GO:0003677 ... P04526 38177685
    886633 8uk9:M (3.1) BS04 ADP 3.6.4.- GO:0003677 ... P04526 38177685
    886634 8uk9:N (3.1) BS01 dna 3.6.4.- GO:0003677 ... P04526 38177685
    886635 8uk9:N (3.1) BS02 ADP 3.6.4.- GO:0003677 ... P04526 38177685
    886636 8uk9:Q (3.1) BS01 dna ? GO:0003677 ... P04527 38177685
    886637 8uk9:Q (3.1) BS02 dna ? GO:0003677 ... P04527 38177685
    886638 8ukb:CB (3.05) BS01 rna N/A GO:0002244 ... P13639 N/A
    886639 8ukb:CB (3.05) BS02 rna N/A GO:0002244 ... P13639 N/A
    886640 8ukb:CD (3.05) BS01 rna N/A N/A Q8NC51 N/A
    886641 8ukb:LA (3.05) BS01 rna N/A GO:0002181 ... P62917 N/A
    886642 8ukb:LA (3.05) BS02 MG N/A GO:0002181 ... P62917 N/A
    886643 8ukb:LB (3.05) BS01 rna N/A GO:0002181 ... P39023 N/A
    886644 8ukb:LC (3.05) BS01 rna N/A N/A P36578 N/A
    886645 8ukb:LC (3.05) BS02 rna N/A N/A P36578 N/A
    886646 8ukb:LD (3.05) BS01 rna N/A GO:0000027 ... P46777 N/A
    886647 8ukb:LD (3.05) BS02 rna N/A GO:0000027 ... P46777 N/A
    886648 8ukb:LE (3.05) BS01 rna N/A N/A Q02878 N/A
    886649 8ukb:LF (3.05) BS01 rna N/A GO:0000463 ... P18124 N/A
    886650 8ukb:LF (3.05) BS02 rna N/A GO:0000463 ... P18124 N/A
    886651 8ukb:LG (3.05) BS01 rna N/A GO:0000470 ... P62424 N/A
    886652 8ukb:LG (3.05) BS02 rna N/A GO:0000470 ... P62424 N/A
    886653 8ukb:LH (3.05) BS01 rna N/A GO:0002181 ... P32969 N/A
    886654 8ukb:LI (3.05) BS01 rna N/A GO:0000027 ... Q96L21 N/A
    886655 8ukb:LI (3.05) BS02 rna N/A GO:0000027 ... Q96L21 N/A
    886656 8ukb:LJ (3.05) BS01 rna N/A GO:0000027 ... P62913 N/A
    886657 8ukb:LJ (3.05) BS02 rna N/A GO:0000027 ... P62913 N/A
    886658 8ukb:LL (3.05) BS01 rna N/A GO:0001824 ... P26373 N/A
    886659 8ukb:LL (3.05) BS02 rna N/A GO:0001824 ... P26373 N/A
    886660 8ukb:LM (3.05) BS01 rna N/A N/A P50914 N/A
    886661 8ukb:LN (3.05) BS01 rna N/A GO:0002181 ... P61313 N/A
    886662 8ukb:LN (3.05) BS02 rna N/A GO:0002181 ... P61313 N/A
    886663 8ukb:LO (3.05) BS01 rna N/A GO:0002181 ... P40429 N/A
    886664 8ukb:LP (3.05) BS01 rna N/A N/A P18621 N/A
    886665 8ukb:LP (3.05) BS02 rna N/A N/A P18621 N/A
    886666 8ukb:LQ (3.05) BS01 rna N/A GO:0002181 ... Q07020 N/A
    886667 8ukb:LR (3.05) BS01 rna N/A GO:0002181 ... P84098 N/A
    886668 8ukb:LR (3.05) BS02 rna N/A GO:0002181 ... P84098 N/A
    886669 8ukb:LS (3.05) BS01 rna N/A GO:0002181 ... Q02543 N/A
    886670 8ukb:LS (3.05) BS02 rna N/A GO:0002181 ... Q02543 N/A
    886671 8ukb:LT (3.05) BS01 rna N/A GO:0002181 ... P46778 N/A
    886672 8ukb:LT (3.05) BS02 rna N/A GO:0002181 ... P46778 N/A
    886673 8ukb:LU (3.05) BS01 rna N/A N/A P35268 N/A
    886674 8ukb:LV (3.05) BS01 rna N/A GO:0000122 ... P62829 N/A
    886675 8ukb:LV (3.05) BS02 rna N/A GO:0000122 ... P62829 N/A
    886676 8ukb:LW (3.05) BS01 rna N/A GO:0005840 ... P83731 N/A
    886677 8ukb:LW (3.05) BS02 rna N/A GO:0005840 ... P83731 N/A
    886678 8ukb:LX (3.05) BS01 rna N/A N/A P62750 N/A
    886679 8ukb:LX (3.05) BS02 rna N/A N/A P62750 N/A
    886680 8ukb:LY (3.05) BS01 rna N/A GO:0002181 ... P61254 N/A
    886681 8ukb:LY (3.05) BS02 rna N/A GO:0002181 ... P61254 N/A
    886682 8ukb:LZ (3.05) BS01 rna N/A GO:0002181 ... P61353 N/A
    886683 8ukb:La (3.05) BS01 rna N/A GO:0002181 ... P46776 N/A
    886684 8ukb:Lb (3.05) BS01 rna N/A N/A P47914 N/A
    886685 8ukb:Lc (3.05) BS01 rna N/A N/A P62888 N/A
    886686 8ukb:Ld (3.05) BS01 rna N/A N/A P62899 N/A
    886687 8ukb:Le (3.05) BS01 rna N/A GO:0002181 ... P62910 N/A
    886688 8ukb:Le (3.05) BS02 MG N/A GO:0002181 ... P62910 N/A
    886689 8ukb:Lf (3.05) BS01 rna N/A GO:0000049 ... P18077 N/A
    886690 8ukb:Lg (3.05) BS01 rna N/A GO:0002181 ... P49207 N/A
    886691 8ukb:Lg (3.05) BS02 MG N/A GO:0002181 ... P49207 N/A
    886692 8ukb:Lg (3.05) BS03 ZN N/A GO:0002181 ... P49207 N/A
    886693 8ukb:Lh (3.05) BS01 rna N/A GO:0000463 ... P42766 N/A
    886694 8ukb:Lh (3.05) BS02 rna N/A GO:0000463 ... P42766 N/A
    886695 8ukb:Li (3.05) BS01 rna N/A GO:0002181 ... Q9Y3U8 N/A
    886696 8ukb:Lj (3.05) BS01 rna N/A N/A P61927 N/A
    886697 8ukb:Lj (3.05) BS02 rna N/A N/A P61927 N/A
    886698 8ukb:Lj (3.05) BS03 ZN N/A N/A P61927 N/A
    886699 8ukb:Lk (3.05) BS01 rna N/A GO:0001501 ... P63173 N/A
    886700 8ukb:Ll (3.05) BS01 rna N/A GO:0002181 ... P62891 N/A
    886701 8ukb:Ll (3.05) BS02 rna N/A GO:0002181 ... P62891 N/A
    886702 8ukb:Lm (3.05) BS01 rna N/A N/A P62987 N/A
    886703 8ukb:Lm (3.05) BS02 ZN N/A N/A P62987 N/A
    886704 8ukb:Lo (3.05) BS01 rna N/A GO:0002181 ... P83881 N/A
    886705 8ukb:Lo (3.05) BS02 ZN N/A GO:0002181 ... P83881 N/A
    886706 8ukb:Lp (3.05) BS01 rna N/A GO:0002181 ... P61513 N/A
    886707 8ukb:Lp (3.05) BS02 ZN N/A GO:0002181 ... P61513 N/A
    886708 8ukb:Lr (3.05) BS01 rna N/A GO:0002181 ... P46779 N/A
    886709 8ukb:Ls (3.05) BS01 rna N/A N/A P05388 N/A
    886710 8ukb:Lt (3.05) BS01 rna N/A N/A P30050 N/A
    886711 8ukb:Lz (3.05) BS01 rna N/A GO:0002181 ... P62906 N/A
    886712 8ukb:SA (3.05) BS01 rna N/A N/A P08865 N/A
    886713 8ukb:SB (3.05) BS01 rna N/A N/A P61247 N/A
    886714 8ukb:SC (3.05) BS01 rna N/A N/A P15880 N/A
    886715 8ukb:SD (3.05) BS01 rna N/A GO:0000977 ... P23396 N/A
    886716 8ukb:SE (3.05) BS01 rna N/A GO:0002181 ... P62701 N/A
    886717 8ukb:SF (3.05) BS01 rna N/A GO:0000028 ... P46782 N/A
    886718 8ukb:SG (3.05) BS01 rna N/A GO:0000082 ... P62753 N/A
    886719 8ukb:SH (3.05) BS01 rna N/A GO:0001843 ... P62081 N/A
    886720 8ukb:SI (3.05) BS01 rna N/A GO:0000462 ... P62241 N/A
    886721 8ukb:SI (3.05) BS02 rna N/A GO:0000462 ... P62241 N/A
    886722 8ukb:SJ (3.05) BS01 rna N/A GO:0002181 ... P46781 N/A
    886723 8ukb:SK (3.05) BS01 rna N/A N/A P46783 N/A
    886724 8ukb:SL (3.05) BS01 rna N/A GO:0002181 ... P62280 N/A
    886725 8ukb:SM (3.05) BS01 rna N/A GO:0002181 ... P25398 N/A
    886726 8ukb:SN (3.05) BS01 rna N/A GO:0002181 ... P62277 N/A
    886727 8ukb:SN (3.05) BS02 rna N/A GO:0002181 ... P62277 N/A
    886728 8ukb:SO (3.05) BS01 rna N/A GO:0000028 ... P62263 N/A
    886729 8ukb:SP (3.05) BS01 rna N/A N/A P62841 N/A
    886730 8ukb:SQ (3.05) BS01 rna N/A GO:0000462 ... P62249 N/A
    886731 8ukb:SR (3.05) BS01 rna N/A GO:0002181 ... P08708 N/A
    886732 8ukb:SS (3.05) BS01 rna N/A GO:0002181 ... P62269 N/A
    886733 8ukb:ST (3.05) BS01 rna N/A GO:0000028 ... P39019 N/A
    886734 8ukb:SU (3.05) BS01 rna N/A N/A P60866 N/A
    886735 8ukb:SW (3.05) BS01 rna N/A GO:0002181 ... P62244 N/A
    886736 8ukb:SX (3.05) BS01 rna N/A GO:0002181 ... P62266 N/A
    886737 8ukb:SY (3.05) BS01 rna N/A GO:0002181 ... P62847 N/A
    886738 8ukb:SZ (3.05) BS01 rna N/A N/A P62851 N/A
    886739 8ukb:Sa (3.05) BS01 rna N/A N/A P62854 N/A
    886740 8ukb:Sa (3.05) BS02 ZN N/A N/A P62854 N/A
    886741 8ukb:Sb (3.05) BS01 rna N/A GO:0000028 ... P42677 N/A
    886742 8ukb:Sc (3.05) BS01 rna N/A GO:0000028 ... P62857 N/A
    886743 8ukb:Sd (3.05) BS01 rna N/A GO:0002181 ... P62273 N/A
    886744 8ukb:Se (3.05) BS01 rna N/A N/A P62861 N/A
    886745 8ukb:Sf (3.05) BS01 rna N/A N/A P62979 N/A
    886746 8ukb:Sg (3.05) BS01 rna N/A GO:0001891 ... P63244 N/A
    886747 8uke:A (2.4) BS01 SAH 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886748 8uke:A (2.4) BS02 CA 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886749 8uke:A (2.4) BS03 CA 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886750 8uke:B (2.4) BS01 SAH 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886751 8uke:B (2.4) BS02 CA 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886752 8uke:B (2.4) BS03 CA 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886753 8uke:C (2.4) BS01 CA 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886754 8uke:C (2.4) BS02 SAH 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886755 8uke:C (2.4) BS03 CA 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886756 8uke:D (2.4) BS01 SAH 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886757 8uke:D (2.4) BS02 CA 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886758 8uke:E (2.4) BS01 SAH 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886759 8uke:E (2.4) BS02 CA 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886760 8uke:E (2.4) BS03 CA 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886761 8uke:F (2.4) BS01 SAH 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886762 8uke:F (2.4) BS02 CA 2.1.1.336 GO:0008168 ... A0A077EWA5 38453941
    886763 8ukn:D (2.75) BS01 ANP N/A GO:0000122 ... P05132 39615689
    886764 8uko:E (2.89) BS01 peptide N/A GO:0000122 ... P05132 39615689
    886765 8uko:E (2.89) BS02 MG N/A GO:0000122 ... P05132 39615689
    886766 8uko:E (2.89) BS03 ANP N/A GO:0000122 ... P05132 39615689
    886767 8ukp:E (2.85) BS01 peptide N/A GO:0000122 ... P05132 39615689
    886768 8ukp:E (2.85) BS02 ANP N/A GO:0000122 ... P05132 39615689
    886769 8ukq:A (3.5) BS01 dna 2.7.7.6 GO:0000428 ... P04050 38393762
    886770 8ukq:A (3.5) BS02 dna 2.7.7.6 GO:0000428 ... P04050 38393762
    886771 8ukq:A (3.5) BS03 ZN 2.7.7.6 GO:0000428 ... P04050 38393762
    886772 8ukq:A (3.5) BS04 ZN 2.7.7.6 GO:0000428 ... P04050 38393762
    886773 8ukq:A (3.5) BS05 MG 2.7.7.6 GO:0000428 ... P04050 38393762
    886774 8ukq:B (3.5) BS01 rna 2.7.7.6 GO:0000428 ... P08518 38393762
    886775 8ukq:B (3.5) BS02 dna 2.7.7.6 GO:0000428 ... P08518 38393762
    886776 8ukq:B (3.5) BS03 ZN 2.7.7.6 GO:0000428 ... P08518 38393762
    886777 8ukq:C (3.5) BS01 ZN ? GO:0000428 ... P16370 38393762
    886778 8ukq:I (3.5) BS01 ZN ? GO:0000428 ... P27999 38393762
    886779 8ukq:I (3.5) BS02 ZN ? GO:0000428 ... P27999 38393762
    886780 8ukq:J (3.5) BS01 ZN ? GO:0000428 ... P22139 38393762
    886781 8ukq:L (3.5) BS01 ZN ? GO:0000428 ... P40422 38393762
    886782 8ukr:A (3.78) BS01 rna 2.7.7.6 GO:0000428 ... P04050 38393762
    886783 8ukr:A (3.78) BS02 dna 2.7.7.6 GO:0000428 ... P04050 38393762
    886784 8ukr:A (3.78) BS03 dna 2.7.7.6 GO:0000428 ... P04050 38393762
    886785 8ukr:A (3.78) BS04 ZN 2.7.7.6 GO:0000428 ... P04050 38393762
    886786 8ukr:A (3.78) BS05 ZN 2.7.7.6 GO:0000428 ... P04050 38393762
    886787 8ukr:A (3.78) BS06 MG 2.7.7.6 GO:0000428 ... P04050 38393762
    886788 8ukr:B (3.78) BS01 rna 2.7.7.6 GO:0000428 ... P08518 38393762
    886789 8ukr:B (3.78) BS02 dna 2.7.7.6 GO:0000428 ... P08518 38393762
    886790 8ukr:B (3.78) BS03 ZN 2.7.7.6 GO:0000428 ... P08518 38393762
    886791 8ukr:B (3.78) BS04 ATP 2.7.7.6 GO:0000428 ... P08518 38393762
    886792 8ukr:C (3.78) BS01 ZN ? GO:0000428 ... P16370 38393762
    886793 8ukr:I (3.78) BS01 ZN ? GO:0000428 ... P27999 38393762
    886794 8ukr:I (3.78) BS02 ZN ? GO:0000428 ... P27999 38393762
    886795 8ukr:J (3.78) BS01 ZN ? GO:0000428 ... P22139 38393762
    886796 8ukr:L (3.78) BS01 ZN ? GO:0000428 ... P40422 38393762
    886797 8uks:A (3.4) BS01 rna 2.7.7.6 GO:0000428 ... P04050 38393762
    886798 8uks:A (3.4) BS02 dna 2.7.7.6 GO:0000428 ... P04050 38393762
    886799 8uks:A (3.4) BS03 dna 2.7.7.6 GO:0000428 ... P04050 38393762
    886800 8uks:A (3.4) BS04 ZN 2.7.7.6 GO:0000428 ... P04050 38393762

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).