SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    888001 8tqs:H (2.207) BS01 dna 3.4.21.5 GO:0004252 ... P00734 38730234
    888002 8tqs:H (2.207) BS02 4CC 3.4.21.5 GO:0004252 ... P00734 38730234
    888003 8tqt:A (1.65) BS01 K2X N/A GO:0008233 ... P0DTD1 N/A
    888004 8tqu:A (1.85) BS01 peptide N/A GO:0008233 ... P0DTD1 N/A
    888005 8tqv:A (2.0) BS01 JS9 2.3.1.- GO:0009058 ... I6X8D2 38577994
    888006 8tqv:B (2.0) BS01 JS9 2.3.1.- GO:0009058 ... I6X8D2 38577994
    888007 8tqw:0 (8.2) BS01 ZN N/A GO:0000151 ... Q6P2C8 39321804
    888008 8tqw:A (8.2) BS01 peptide N/A GO:0000122 ... Q15648 39321804
    888009 8tqw:c (8.2) BS01 ZN N/A GO:0000151 ... Q93074 39321804
    888010 8tqw:d (8.2) BS01 ZN N/A GO:0000122 ... Q9UHV7 39321804
    888011 8tr0:A (3.2) BS01 Z99 N/A GO:0004930 ... P31422 37645747
    888012 8tr0:B (3.2) BS01 Z99 N/A GO:0004930 ... P31422 37645747
    888013 8tr1:A (2.46) BS01 JEI 2.4.2.8 GO:0000287 ... Q07010 38651522
    888014 8tr1:B (2.46) BS01 JEI 2.4.2.8 GO:0000287 ... Q07010 38651522
    888015 8tr1:C (2.46) BS01 JEI 2.4.2.8 GO:0000287 ... Q07010 38651522
    888016 8tr1:D (2.46) BS01 JEI 2.4.2.8 GO:0000287 ... Q07010 38651522
    888017 8tr2:A (3.5) BS01 JIX N/A GO:0004930 ... P31422 37645747
    888018 8tr2:A (3.5) BS02 CA N/A GO:0004930 ... P31422 37645747
    888019 8tr2:A (3.5) BS03 CA N/A GO:0004930 ... P31422 37645747
    888020 8tr2:B (3.5) BS01 JIX N/A GO:0004930 ... P31422 37645747
    888021 8tr2:B (3.5) BS02 CA N/A GO:0004930 ... P31422 37645747
    888022 8tr2:B (3.5) BS03 CA N/A GO:0004930 ... P31422 37645747
    888023 8tr4:A (2.1) BS01 K6C 2.3.1.- GO:0009058 ... I6X8D2 38577994
    888024 8tr4:B (2.1) BS01 K6C 2.3.1.- GO:0009058 ... I6X8D2 38577994
    888025 8tr5:A (2.53) BS01 GDP N/A GO:0000287 ... Q64663 39107314
    888026 8tr5:A (2.53) BS02 ZN N/A GO:0000287 ... Q64663 39107314
    888027 8tr5:A (2.53) BS03 ZN N/A GO:0000287 ... Q64663 39107314
    888028 8tr5:B (2.53) BS01 GDP N/A GO:0000287 ... Q64663 39107314
    888029 8tr5:B (2.53) BS02 ZN N/A GO:0000287 ... Q64663 39107314
    888030 8tr5:B (2.53) BS03 ZN N/A GO:0000287 ... Q64663 39107314
    888031 8tr5:C (2.53) BS01 GDP N/A GO:0000287 ... Q64663 39107314
    888032 8tr5:C (2.53) BS02 ZN N/A GO:0000287 ... Q64663 39107314
    888033 8tr5:C (2.53) BS03 ZN N/A GO:0000287 ... Q64663 39107314
    888034 8tr6:A (2.18) BS01 KE3 N/A GO:0000287 ... Q64663 39365862
    888035 8tr6:A (2.18) BS02 GDP N/A GO:0000287 ... Q64663 39365862
    888036 8tr6:A (2.18) BS03 ZN N/A GO:0000287 ... Q64663 39365862
    888037 8tr6:A (2.18) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888038 8tr6:B (2.18) BS01 KE3 N/A GO:0000287 ... Q64663 39365862
    888039 8tr6:B (2.18) BS02 GDP N/A GO:0000287 ... Q64663 39365862
    888040 8tr6:B (2.18) BS03 ZN N/A GO:0000287 ... Q64663 39365862
    888041 8tr6:B (2.18) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888042 8tr6:C (2.18) BS01 KE3 N/A GO:0000287 ... Q64663 39365862
    888043 8tr6:C (2.18) BS02 GDP N/A GO:0000287 ... Q64663 39365862
    888044 8tr6:C (2.18) BS03 ZN N/A GO:0000287 ... Q64663 39365862
    888045 8tr6:C (2.18) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888046 8tr7:A (2.53) BS01 KDU N/A GO:0000287 ... Q64663 39365862
    888047 8tr7:A (2.53) BS02 GDP N/A GO:0000287 ... Q64663 39365862
    888048 8tr7:A (2.53) BS03 ZN N/A GO:0000287 ... Q64663 39365862
    888049 8tr7:A (2.53) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888050 8tr7:A (2.53) BS05 KDU N/A GO:0000287 ... Q64663 39365862
    888051 8tr7:B (2.53) BS01 KDU N/A GO:0000287 ... Q64663 39365862
    888052 8tr7:B (2.53) BS02 KDU N/A GO:0000287 ... Q64663 39365862
    888053 8tr7:B (2.53) BS03 GDP N/A GO:0000287 ... Q64663 39365862
    888054 8tr7:B (2.53) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888055 8tr7:B (2.53) BS05 ZN N/A GO:0000287 ... Q64663 39365862
    888056 8tr7:C (2.53) BS01 KDU N/A GO:0000287 ... Q64663 39365862
    888057 8tr7:C (2.53) BS02 KDU N/A GO:0000287 ... Q64663 39365862
    888058 8tr7:C (2.53) BS03 GDP N/A GO:0000287 ... Q64663 39365862
    888059 8tr7:C (2.53) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888060 8tr7:C (2.53) BS05 ZN N/A GO:0000287 ... Q64663 39365862
    888061 8tr8:A (2.21) BS01 KEI N/A GO:0000287 ... Q64663 39365862
    888062 8tr8:A (2.21) BS02 GDP N/A GO:0000287 ... Q64663 39365862
    888063 8tr8:A (2.21) BS03 ZN N/A GO:0000287 ... Q64663 39365862
    888064 8tr8:A (2.21) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888065 8tr8:A (2.21) BS05 KEI N/A GO:0000287 ... Q64663 39365862
    888066 8tr8:B (2.21) BS01 KEI N/A GO:0000287 ... Q64663 39365862
    888067 8tr8:B (2.21) BS02 KEI N/A GO:0000287 ... Q64663 39365862
    888068 8tr8:B (2.21) BS03 GDP N/A GO:0000287 ... Q64663 39365862
    888069 8tr8:B (2.21) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888070 8tr8:B (2.21) BS05 ZN N/A GO:0000287 ... Q64663 39365862
    888071 8tr8:C (2.21) BS01 KEI N/A GO:0000287 ... Q64663 39365862
    888072 8tr8:C (2.21) BS02 KEI N/A GO:0000287 ... Q64663 39365862
    888073 8tr8:C (2.21) BS03 GDP N/A GO:0000287 ... Q64663 39365862
    888074 8tr8:C (2.21) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888075 8tr8:C (2.21) BS05 ZN N/A GO:0000287 ... Q64663 39365862
    888076 8tr9:A (3.2) BS01 GDP N/A GO:0000785 ... P21980 39134806
    888077 8tra:A (2.41) BS01 KF0 N/A GO:0000287 ... Q64663 39365862
    888078 8tra:A (2.41) BS02 GDP N/A GO:0000287 ... Q64663 39365862
    888079 8tra:A (2.41) BS03 ZN N/A GO:0000287 ... Q64663 39365862
    888080 8tra:A (2.41) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888081 8tra:B (2.41) BS01 KF0 N/A GO:0000287 ... Q64663 39365862
    888082 8tra:B (2.41) BS02 GDP N/A GO:0000287 ... Q64663 39365862
    888083 8tra:B (2.41) BS03 ZN N/A GO:0000287 ... Q64663 39365862
    888084 8tra:B (2.41) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888085 8tra:C (2.41) BS01 KF0 N/A GO:0000287 ... Q64663 39365862
    888086 8tra:C (2.41) BS02 GDP N/A GO:0000287 ... Q64663 39365862
    888087 8tra:C (2.41) BS03 ZN N/A GO:0000287 ... Q64663 39365862
    888088 8tra:C (2.41) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888089 8trb:A (2.36) BS01 7RV N/A GO:0000287 ... Q64663 39365862
    888090 8trb:A (2.36) BS02 GDP N/A GO:0000287 ... Q64663 39365862
    888091 8trb:A (2.36) BS03 ZN N/A GO:0000287 ... Q64663 39365862
    888092 8trb:A (2.36) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888093 8trb:A (2.36) BS05 7RV N/A GO:0000287 ... Q64663 39365862
    888094 8trb:B (2.36) BS01 7RV N/A GO:0000287 ... Q64663 39365862
    888095 8trb:B (2.36) BS02 7RV N/A GO:0000287 ... Q64663 39365862
    888096 8trb:B (2.36) BS03 GDP N/A GO:0000287 ... Q64663 39365862
    888097 8trb:B (2.36) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888098 8trb:B (2.36) BS05 ZN N/A GO:0000287 ... Q64663 39365862
    888099 8trb:C (2.36) BS01 7RV N/A GO:0000287 ... Q64663 39365862
    888100 8trb:C (2.36) BS02 7RV N/A GO:0000287 ... Q64663 39365862
    888101 8trb:C (2.36) BS03 GDP N/A GO:0000287 ... Q64663 39365862
    888102 8trb:C (2.36) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888103 8trb:C (2.36) BS05 ZN N/A GO:0000287 ... Q64663 39365862
    888104 8trc:A (3.3) BS01 Z99 N/A GO:0004930 ... P31422 37645747
    888105 8trc:B (3.3) BS01 Z99 N/A GO:0004930 ... P31422 37645747
    888106 8trd:A (3.4) BS01 Z99 N/A GO:0004930 ... P31422 39090128
    888107 8trd:B (3.4) BS01 Z99 N/A GO:0004930 ... P31422 39090128
    888108 8tre:A () BS01 ATP 2.3.2.26 N/A N/A N/A
    888109 8trg:A (2.93) BS01 dna ? GO:0000150 ... P0A7G6 38755298
    888110 8trg:A (2.93) BS02 AGS ? GO:0000150 ... P0A7G6 38755298
    888111 8trg:A (2.93) BS03 AGS ? GO:0000150 ... P0A7G6 38755298
    888112 8trg:B (2.93) BS01 dna ? GO:0000150 ... P0A7G6 38755298
    888113 8trg:B (2.93) BS02 AGS ? GO:0000150 ... P0A7G6 38755298
    888114 8trg:B (2.93) BS03 AGS ? GO:0000150 ... P0A7G6 38755298
    888115 8trg:C (2.93) BS01 dna ? GO:0000150 ... P0A7G6 38755298
    888116 8trg:C (2.93) BS02 AGS ? GO:0000150 ... P0A7G6 38755298
    888117 8trg:C (2.93) BS03 AGS ? GO:0000150 ... P0A7G6 38755298
    888118 8trg:D (2.93) BS01 dna ? GO:0000150 ... P0A7G6 38755298
    888119 8trg:D (2.93) BS02 AGS ? GO:0000150 ... P0A7G6 38755298
    888120 8trg:D (2.93) BS03 AGS ? GO:0000150 ... P0A7G6 38755298
    888121 8trg:E (2.93) BS01 dna ? GO:0000150 ... P0A7G6 38755298
    888122 8trg:E (2.93) BS02 AGS ? GO:0000150 ... P0A7G6 38755298
    888123 8trg:E (2.93) BS03 AGS ? GO:0000150 ... P0A7G6 38755298
    888124 8trg:F (2.93) BS01 dna ? GO:0000150 ... P0A7G6 38755298
    888125 8trg:F (2.93) BS02 AGS ? GO:0000150 ... P0A7G6 38755298
    888126 8trg:F (2.93) BS03 AGS ? GO:0000150 ... P0A7G6 38755298
    888127 8trg:G (2.93) BS01 dna ? GO:0000150 ... P0A7G6 38755298
    888128 8trg:G (2.93) BS02 AGS ? GO:0000150 ... P0A7G6 38755298
    888129 8trg:G (2.93) BS03 AGS ? GO:0000150 ... P0A7G6 38755298
    888130 8trg:H (2.93) BS01 dna ? GO:0000150 ... P0A7G6 38755298
    888131 8trg:H (2.93) BS02 AGS ? GO:0000150 ... P0A7G6 38755298
    888132 8trh:0 (3.7) BS01 ZN N/A GO:0000151 ... Q6P2C8 39321804
    888133 8trh:P (3.7) BS01 ZN N/A GO:0003713 ... Q9Y2X0 39321804
    888134 8tri:A (3.716) BS01 CA N/A GO:0005509 ... Q99PF4 N/A
    888135 8tri:A (3.716) BS02 CA N/A GO:0005509 ... Q99PF4 N/A
    888136 8tri:A (3.716) BS03 CA N/A GO:0005509 ... Q99PF4 N/A
    888137 8tri:A (3.716) BS04 CA N/A GO:0005509 ... Q99PF4 N/A
    888138 8tri:A (3.716) BS05 CA N/A GO:0005509 ... Q99PF4 N/A
    888139 8tri:A (3.716) BS06 CA N/A GO:0005509 ... Q99PF4 N/A
    888140 8tri:B (3.716) BS01 CA N/A GO:0005509 ... Q99PF4 N/A
    888141 8tri:B (3.716) BS02 CA N/A GO:0005509 ... Q99PF4 N/A
    888142 8tri:B (3.716) BS03 CA N/A GO:0005509 ... Q99PF4 N/A
    888143 8tri:B (3.716) BS04 CA N/A GO:0005509 ... Q99PF4 N/A
    888144 8tri:B (3.716) BS05 CA N/A GO:0005509 ... Q99PF4 N/A
    888145 8tri:B (3.716) BS06 CA N/A GO:0005509 ... Q99PF4 N/A
    888146 8tri:C (3.716) BS01 CA N/A GO:0005509 ... Q99PF4 N/A
    888147 8tri:C (3.716) BS02 CA N/A GO:0005509 ... Q99PF4 N/A
    888148 8tri:C (3.716) BS03 CA N/A GO:0005509 ... Q99PF4 N/A
    888149 8tri:C (3.716) BS04 CA N/A GO:0005509 ... Q99PF4 N/A
    888150 8tri:C (3.716) BS05 CA N/A GO:0005509 ... Q99PF4 N/A
    888151 8tri:C (3.716) BS06 CA N/A GO:0005509 ... Q99PF4 N/A
    888152 8trj:A (2.78) BS01 KD9 N/A GO:0000287 ... Q64663 39107314
    888153 8trj:A (2.78) BS02 GDP N/A GO:0000287 ... Q64663 39107314
    888154 8trj:A (2.78) BS03 ZN N/A GO:0000287 ... Q64663 39107314
    888155 8trj:A (2.78) BS04 ZN N/A GO:0000287 ... Q64663 39107314
    888156 8trj:A (2.78) BS05 KD9 N/A GO:0000287 ... Q64663 39107314
    888157 8trj:B (2.78) BS01 KD9 N/A GO:0000287 ... Q64663 39107314
    888158 8trj:B (2.78) BS02 GDP N/A GO:0000287 ... Q64663 39107314
    888159 8trj:B (2.78) BS03 ZN N/A GO:0000287 ... Q64663 39107314
    888160 8trj:B (2.78) BS04 ZN N/A GO:0000287 ... Q64663 39107314
    888161 8trj:B (2.78) BS05 KD9 N/A GO:0000287 ... Q64663 39107314
    888162 8trj:C (2.78) BS01 KD9 N/A GO:0000287 ... Q64663 39107314
    888163 8trj:C (2.78) BS02 KD9 N/A GO:0000287 ... Q64663 39107314
    888164 8trj:C (2.78) BS03 GDP N/A GO:0000287 ... Q64663 39107314
    888165 8trj:C (2.78) BS04 ZN N/A GO:0000287 ... Q64663 39107314
    888166 8trj:C (2.78) BS05 ZN N/A GO:0000287 ... Q64663 39107314
    888167 8trk:A (2.69) BS01 KFM N/A GO:0000287 ... Q64663 39365862
    888168 8trk:A (2.69) BS02 GDP N/A GO:0000287 ... Q64663 39365862
    888169 8trk:A (2.69) BS03 ZN N/A GO:0000287 ... Q64663 39365862
    888170 8trk:A (2.69) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888171 8trk:A (2.69) BS05 KFM N/A GO:0000287 ... Q64663 39365862
    888172 8trk:B (2.69) BS01 KFM N/A GO:0000287 ... Q64663 39365862
    888173 8trk:B (2.69) BS02 KFM N/A GO:0000287 ... Q64663 39365862
    888174 8trk:B (2.69) BS03 GDP N/A GO:0000287 ... Q64663 39365862
    888175 8trk:B (2.69) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888176 8trk:B (2.69) BS05 ZN N/A GO:0000287 ... Q64663 39365862
    888177 8trk:C (2.69) BS01 KFM N/A GO:0000287 ... Q64663 39365862
    888178 8trk:C (2.69) BS02 KFM N/A GO:0000287 ... Q64663 39365862
    888179 8trk:C (2.69) BS03 GDP N/A GO:0000287 ... Q64663 39365862
    888180 8trk:C (2.69) BS04 ZN N/A GO:0000287 ... Q64663 39365862
    888181 8trk:C (2.69) BS05 ZN N/A GO:0000287 ... Q64663 39365862
    888182 8trl:A (2.4) BS01 peptide N/A GO:0006955 ... P01903 39043656
    888183 8trl:B (2.4) BS01 peptide N/A GO:0006955 ... P01911 39043656
    888184 8trl:D (2.4) BS01 peptide N/A GO:0006955 ... P01903 39043656
    888185 8trl:E (2.4) BS01 peptide N/A GO:0006955 ... P01911 39043656
    888186 8trl:G (2.4) BS01 peptide N/A N/A N/A 39043656
    888187 8trl:H (2.4) BS01 peptide N/A N/A N/A 39043656
    888188 8trl:I (2.4) BS01 peptide N/A N/A N/A 39043656
    888189 8trl:J (2.4) BS01 peptide N/A N/A N/A 39043656
    888190 8trm:A (2.5) BS01 ADP 3.6.4.- GO:0005515 ... P53476 38418447
    888191 8trm:B (2.5) BS01 ADP 3.6.4.- GO:0005515 ... P53476 38418447
    888192 8trm:C (2.5) BS01 ADP 3.6.4.- GO:0005515 ... P53476 38418447
    888193 8trn:A (3.0) BS01 ADP 3.6.4.- GO:0005515 ... P53476 38418447
    888194 8trn:A (3.0) BS02 9UE 3.6.4.- GO:0005515 ... P53476 38418447
    888195 8trn:A (3.0) BS03 9UE 3.6.4.- GO:0005515 ... P53476 38418447
    888196 8trn:B (3.0) BS01 9UE 3.6.4.- GO:0005515 ... P53476 38418447
    888197 8trn:B (3.0) BS02 ADP 3.6.4.- GO:0005515 ... P53476 38418447
    888198 8trn:B (3.0) BS03 9UE 3.6.4.- GO:0005515 ... P53476 38418447
    888199 8trn:C (3.0) BS01 ADP 3.6.4.- GO:0005515 ... P53476 38418447
    888200 8trn:C (3.0) BS02 9UE 3.6.4.- GO:0005515 ... P53476 38418447

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).