SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4433 4434 4435 4436 4437 4438 4439 4440 4441 4442 4443 4444 4445 4446 4447 4448 4449 4450 4451 4452 4453 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    888401 8tue:V (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    888402 8tue:W (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    888403 8tue:X (2.1) BS01 ZN N/A GO:0004322 ... P09528 N/A
    888404 8tuf:A (2.03) BS01 MG N/A GO:0003723 ... K4L8Z7 N/A
    888405 8tug:A (3.5) BS01 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888406 8tug:A (3.5) BS02 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888407 8tug:A (3.5) BS03 rna 2.7.7.6 GO:0001172 ... P04050 38194460
    888408 8tug:A (3.5) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888409 8tug:A (3.5) BS05 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888410 8tug:A (3.5) BS06 MG 2.7.7.6 GO:0001172 ... P04050 38194460
    888411 8tug:B (3.5) BS01 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888412 8tug:B (3.5) BS02 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888413 8tug:B (3.5) BS03 rna 2.7.7.6 GO:0001172 ... P08518 38194460
    888414 8tug:B (3.5) BS04 ZN 2.7.7.6 GO:0001172 ... P08518 38194460
    888415 8tug:C (3.5) BS01 ZN ? GO:0000428 ... P16370 38194460
    888416 8tug:E (3.5) BS01 dna ? GO:0001172 ... P20434 38194460
    888417 8tug:I (3.5) BS01 ZN ? GO:0001172 ... P27999 38194460
    888418 8tug:I (3.5) BS02 ZN ? GO:0001172 ... P27999 38194460
    888419 8tug:J (3.5) BS01 ZN ? GO:0001172 ... P22139 38194460
    888420 8tug:L (3.5) BS01 ZN ? GO:0001172 ... P40422 38194460
    888421 8tug:M (3.5) BS01 dna N/A N/A N/A 38194460
    888422 8tug:M (3.5) BS02 dna N/A N/A N/A 38194460
    888423 8tuh:A (2.20011) BS01 peptide ? N/A P01889 38684663
    888424 8tun:C (3.4) BS01 KJ9 ? GO:0005886 ... A0A2S5T447 38570679
    888425 8tun:D (3.4) BS01 KJ9 ? GO:0005886 ... A0A2S5T447 38570679
    888426 8tuq:A (2.0) BS01 peptide ? GO:0005737 ... P52293 38108201
    888427 8tur:A (2.15) BS01 peptide ? GO:0005737 ... P52293 38108201
    888428 8tus:A (2.6) BS01 peptide ? GO:0005737 ... P52293 38108201
    888429 8tut:A (2.55) BS01 peptide ? GO:0005737 ... P52293 38108201
    888430 8tuu:A (2.5) BS01 peptide ? GO:0005737 ... P52293 38108201
    888431 8tuv:A (2.3) BS01 peptide ? GO:0005737 ... P52293 38108201
    888432 8tuv:A (2.3) BS02 peptide ? GO:0005737 ... P52293 38108201
    888433 8tux:M (3.9) BS01 rna ? GO:0019062 ... Q38061 38574145
    888434 8tux:ab (3.9) BS01 rna ? GO:0003723 ... P03630 38574145
    888435 8tux:m (3.9) BS01 rna ? GO:0019062 ... Q38061 38574145
    888436 8tv5:C (4.6) BS01 MG N/A GO:0005003 ... P29317 40411427
    888437 8tv6:B (1.74) BS01 V83 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 38592023
    888438 8tv7:A (1.5) BS01 VI1 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    N/A P0DTD1 38592023
    888439 8tvc:A (1.93) BS01 dna N/A GO:0000932 ... Q7YR23 39389938
    888440 8tvc:A (1.93) BS02 ZN N/A GO:0000932 ... Q7YR23 39389938
    888441 8tvc:A (1.93) BS03 ZN N/A GO:0000932 ... Q7YR23 39389938
    888442 8tvi:A (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    888443 8tvi:B (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    888444 8tvi:C (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    888445 8tvi:D (3.2) BS01 ZN N/A GO:0019031 ... N/A 38593070
    888446 8tvk:A (1.04) BS01 GDP N/A GO:0003924 ... P01116 40060414
    888447 8tvm:A (2.1) BS01 VDC N/A GO:0000287 ... Q9NWZ3 38746903
    888448 8tvm:B (2.1) BS01 VDC N/A GO:0000287 ... Q9NWZ3 38746903
    888449 8tvm:C (2.1) BS01 VDC N/A GO:0000287 ... Q9NWZ3 38746903
    888450 8tvm:D (2.1) BS01 VDC N/A GO:0000287 ... Q9NWZ3 38746903
    888451 8tvn:A (1.95) BS01 VE9 N/A GO:0000287 ... Q9NWZ3 38746903
    888452 8tvn:B (1.95) BS01 VE9 N/A GO:0000287 ... Q9NWZ3 38746903
    888453 8tvn:C (1.95) BS01 VE9 N/A GO:0000287 ... Q9NWZ3 38746903
    888454 8tvn:D (1.95) BS01 VE9 N/A GO:0000287 ... Q9NWZ3 38746903
    888455 8tvp:A (3.7) BS01 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888456 8tvp:A (3.7) BS02 rna 2.7.7.6 GO:0001172 ... P04050 38194460
    888457 8tvp:A (3.7) BS03 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888458 8tvp:A (3.7) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888459 8tvp:A (3.7) BS05 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888460 8tvp:A (3.7) BS06 MG 2.7.7.6 GO:0001172 ... P04050 38194460
    888461 8tvp:B (3.7) BS01 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888462 8tvp:B (3.7) BS02 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888463 8tvp:B (3.7) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 38194460
    888464 8tvp:C (3.7) BS01 ZN ? GO:0000428 ... P16370 38194460
    888465 8tvp:E (3.7) BS01 dna ? GO:0001172 ... P20434 38194460
    888466 8tvp:I (3.7) BS01 ZN ? GO:0001172 ... P27999 38194460
    888467 8tvp:I (3.7) BS02 ZN ? GO:0001172 ... P27999 38194460
    888468 8tvp:J (3.7) BS01 ZN ? GO:0001172 ... P22139 38194460
    888469 8tvp:L (3.7) BS01 ZN ? GO:0001172 ... P40422 38194460
    888470 8tvp:M (3.7) BS01 dna N/A N/A N/A 38194460
    888471 8tvp:M (3.7) BS02 dna N/A N/A N/A 38194460
    888472 8tvq:A (4.6) BS01 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888473 8tvq:A (4.6) BS02 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888474 8tvq:A (4.6) BS03 rna 2.7.7.6 GO:0001172 ... P04050 38194460
    888475 8tvq:A (4.6) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888476 8tvq:A (4.6) BS05 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888477 8tvq:A (4.6) BS06 MG 2.7.7.6 GO:0001172 ... P04050 38194460
    888478 8tvq:B (4.6) BS01 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888479 8tvq:B (4.6) BS02 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888480 8tvq:B (4.6) BS03 rna 2.7.7.6 GO:0001172 ... P08518 38194460
    888481 8tvq:B (4.6) BS04 ZN 2.7.7.6 GO:0001172 ... P08518 38194460
    888482 8tvq:C (4.6) BS01 ZN ? GO:0000428 ... P16370 38194460
    888483 8tvq:I (4.6) BS01 ZN ? GO:0001172 ... P27999 38194460
    888484 8tvq:J (4.6) BS01 ZN ? GO:0001172 ... P22139 38194460
    888485 8tvq:L (4.6) BS01 ZN ? GO:0001172 ... P40422 38194460
    888486 8tvq:M (4.6) BS01 dna N/A N/A N/A 38194460
    888487 8tvs:A (4.4) BS01 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888488 8tvs:A (4.4) BS02 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888489 8tvs:A (4.4) BS03 rna 2.7.7.6 GO:0001172 ... P04050 38194460
    888490 8tvs:A (4.4) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888491 8tvs:A (4.4) BS05 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888492 8tvs:A (4.4) BS06 MG 2.7.7.6 GO:0001172 ... P04050 38194460
    888493 8tvs:B (4.4) BS01 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888494 8tvs:B (4.4) BS02 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888495 8tvs:B (4.4) BS03 rna 2.7.7.6 GO:0001172 ... P08518 38194460
    888496 8tvs:B (4.4) BS04 ZN 2.7.7.6 GO:0001172 ... P08518 38194460
    888497 8tvs:C (4.4) BS01 ZN ? GO:0000428 ... P16370 38194460
    888498 8tvs:I (4.4) BS01 ZN ? GO:0001172 ... P27999 38194460
    888499 8tvs:I (4.4) BS02 ZN ? GO:0001172 ... P27999 38194460
    888500 8tvs:J (4.4) BS01 ZN ? GO:0001172 ... P22139 38194460
    888501 8tvs:L (4.4) BS01 ZN ? GO:0001172 ... P40422 38194460
    888502 8tvs:M (4.4) BS01 dna N/A N/A N/A 38194460
    888503 8tvs:M (4.4) BS02 dna N/A N/A N/A 38194460
    888504 8tvt:A (2.0) BS01 PLP N/A GO:0030170 ... Q9Y697 40797101
    888505 8tvt:A (2.0) BS02 LPH N/A GO:0030170 ... Q9Y697 40797101
    888506 8tvt:B (2.0) BS01 EDT N/A GO:0005198 ... Q9HD34 40797101
    888507 8tvt:B (2.0) BS02 8Q1 N/A GO:0005198 ... Q9HD34 40797101
    888508 8tvv:A (3.7) BS01 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888509 8tvv:A (3.7) BS02 rna 2.7.7.6 GO:0001172 ... P04050 38194460
    888510 8tvv:A (3.7) BS03 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888511 8tvv:A (3.7) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888512 8tvv:A (3.7) BS05 MG 2.7.7.6 GO:0001172 ... P04050 38194460
    888513 8tvv:B (3.7) BS01 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888514 8tvv:B (3.7) BS02 rna 2.7.7.6 GO:0001172 ... P08518 38194460
    888515 8tvv:B (3.7) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 38194460
    888516 8tvv:C (3.7) BS01 ZN ? GO:0000428 ... P16370 38194460
    888517 8tvv:I (3.7) BS01 ZN ? GO:0001172 ... P27999 38194460
    888518 8tvv:I (3.7) BS02 ZN ? GO:0001172 ... P27999 38194460
    888519 8tvv:J (3.7) BS01 ZN ? GO:0001172 ... P22139 38194460
    888520 8tvv:L (3.7) BS01 ZN ? GO:0001172 ... P40422 38194460
    888521 8tvw:A (3.6) BS01 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888522 8tvw:A (3.6) BS02 rna 2.7.7.6 GO:0001172 ... P04050 38194460
    888523 8tvw:A (3.6) BS03 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888524 8tvw:A (3.6) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888525 8tvw:A (3.6) BS05 MG 2.7.7.6 GO:0001172 ... P04050 38194460
    888526 8tvw:B (3.6) BS01 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888527 8tvw:B (3.6) BS02 rna 2.7.7.6 GO:0001172 ... P08518 38194460
    888528 8tvw:B (3.6) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 38194460
    888529 8tvw:C (3.6) BS01 ZN ? GO:0000428 ... P16370 38194460
    888530 8tvw:E (3.6) BS01 dna ? GO:0001172 ... P20434 38194460
    888531 8tvw:I (3.6) BS01 ZN ? GO:0001172 ... P27999 38194460
    888532 8tvw:I (3.6) BS02 ZN ? GO:0001172 ... P27999 38194460
    888533 8tvw:J (3.6) BS01 ZN ? GO:0001172 ... P22139 38194460
    888534 8tvw:L (3.6) BS01 ZN ? GO:0001172 ... P40422 38194460
    888535 8tvx:A (3.7) BS01 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888536 8tvx:A (3.7) BS02 rna 2.7.7.6 GO:0001172 ... P04050 38194460
    888537 8tvx:A (3.7) BS03 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888538 8tvx:A (3.7) BS04 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888539 8tvx:A (3.7) BS05 MG 2.7.7.6 GO:0001172 ... P04050 38194460
    888540 8tvx:B (3.7) BS01 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888541 8tvx:B (3.7) BS02 rna 2.7.7.6 GO:0001172 ... P08518 38194460
    888542 8tvx:B (3.7) BS03 ZN 2.7.7.6 GO:0001172 ... P08518 38194460
    888543 8tvx:C (3.7) BS01 ZN ? GO:0000428 ... P16370 38194460
    888544 8tvx:E (3.7) BS01 dna ? GO:0001172 ... P20434 38194460
    888545 8tvx:I (3.7) BS01 ZN ? GO:0001172 ... P27999 38194460
    888546 8tvx:J (3.7) BS01 ZN ? GO:0001172 ... P22139 38194460
    888547 8tvx:L (3.7) BS01 ZN ? GO:0001172 ... P40422 38194460
    888548 8tvy:A (3.1) BS01 dna 2.7.7.6 GO:0001172 ... P04050 38194460
    888549 8tvy:A (3.1) BS02 rna 2.7.7.6 GO:0001172 ... P04050 38194460
    888550 8tvy:A (3.1) BS03 ZN 2.7.7.6 GO:0001172 ... P04050 38194460
    888551 8tvy:A (3.1) BS04 MG 2.7.7.6 GO:0001172 ... P04050 38194460
    888552 8tvy:B (3.1) BS01 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888553 8tvy:B (3.1) BS02 dna 2.7.7.6 GO:0001172 ... P08518 38194460
    888554 8tvy:B (3.1) BS03 rna 2.7.7.6 GO:0001172 ... P08518 38194460
    888555 8tvy:B (3.1) BS04 ZN 2.7.7.6 GO:0001172 ... P08518 38194460
    888556 8tvy:C (3.1) BS01 ZN ? GO:0000428 ... P16370 38194460
    888557 8tvy:E (3.1) BS01 dna ? GO:0001172 ... P20434 38194460
    888558 8tvy:I (3.1) BS01 ZN ? GO:0001172 ... P27999 38194460
    888559 8tvy:I (3.1) BS02 ZN ? GO:0001172 ... P27999 38194460
    888560 8tvy:M (3.1) BS01 dna 3.6.4.12 GO:0000785 ... P40352 38194460
    888561 8tvy:M (3.1) BS02 dna 3.6.4.12 GO:0000785 ... P40352 38194460
    888562 8tw0:A (1.53) BS01 peptide N/A N/A N/A 39009792
    888563 8tw0:C (1.53) BS01 peptide N/A N/A N/A 39009792
    888564 8tw4:G (3.3) BS01 CLR N/A GO:0004888 ... P09693 37662363
    888565 8tw6:A (3.1) BS01 CLR N/A N/A N/A 37662363
    888566 8tw6:B (3.1) BS01 CLR N/A GO:0006091 ... A0A0K0K1A5
    P0DTU4
    37662363
    888567 8tw7:2 (3.8) BS01 AGS N/A GO:0000076 ... P40348 39088616
    888568 8tw7:2 (3.8) BS02 MG N/A GO:0000076 ... P40348 39088616
    888569 8tw7:3 (3.8) BS01 AGS N/A GO:0000077 ... P38629 39088616
    888570 8tw7:3 (3.8) BS02 MG N/A GO:0000077 ... P38629 39088616
    888571 8tw7:4 (3.8) BS01 AGS N/A GO:0000077 ... P40339 39088616
    888572 8tw7:5 (3.8) BS01 ADP N/A GO:0000077 ... P38251 39088616
    888573 8tw8:2 (3.5) BS01 AGS N/A GO:0000076 ... P40348 39088616
    888574 8tw8:2 (3.5) BS02 MG N/A GO:0000076 ... P40348 39088616
    888575 8tw8:3 (3.5) BS01 AGS N/A GO:0000077 ... P38629 39088616
    888576 8tw8:3 (3.5) BS02 MG N/A GO:0000077 ... P38629 39088616
    888577 8tw8:4 (3.5) BS01 AGS N/A GO:0000077 ... P40339 39088616
    888578 8tw8:5 (3.5) BS01 AGS N/A GO:0000077 ... P38251 39088616
    888579 8tw8:5 (3.5) BS02 ADP N/A GO:0000077 ... P38251 39088616
    888580 8tw9:B (3.6) BS01 peptide N/A GO:0000775 ... P25559 39088616
    888581 8tw9:D (3.6) BS01 peptide N/A GO:0003674 ... P38877 39088616
    888582 8tw9:E (3.6) BS01 peptide N/A GO:0000166 ... P21951 39088616
    888583 8tw9:E (3.6) BS02 dna N/A GO:0000166 ... P21951 39088616
    888584 8tw9:E (3.6) BS03 dna N/A GO:0000166 ... P21951 39088616
    888585 8tw9:E (3.6) BS04 SF4 N/A GO:0000166 ... P21951 39088616
    888586 8twa:2 (4.1) BS01 AGS N/A GO:0000076 ... P40348 39088616
    888587 8twa:2 (4.1) BS02 MG N/A GO:0000076 ... P40348 39088616
    888588 8twa:3 (4.1) BS01 AGS N/A GO:0000077 ... P38629 39088616
    888589 8twa:3 (4.1) BS02 MG N/A GO:0000077 ... P38629 39088616
    888590 8twa:4 (4.1) BS01 AGS N/A GO:0000077 ... P40339 39088616
    888591 8twa:5 (4.1) BS01 AGS N/A GO:0000077 ... P38251 39088616
    888592 8twa:5 (4.1) BS02 ADP N/A GO:0000077 ... P38251 39088616
    888593 8twa:B (4.1) BS01 peptide N/A GO:0000775 ... P25559 39088616
    888594 8twa:D (4.1) BS01 peptide N/A GO:0003674 ... P38877 39088616
    888595 8twa:E (4.1) BS01 peptide N/A GO:0000166 ... P21951 39088616
    888596 8twa:E (4.1) BS02 dna N/A GO:0000166 ... P21951 39088616
    888597 8twa:E (4.1) BS03 dna N/A GO:0000166 ... P21951 39088616
    888598 8twa:E (4.1) BS04 SF4 N/A GO:0000166 ... P21951 39088616
    888599 8twb:2 (3.2) BS01 dna N/A GO:0000076 ... P40348 39088616
    888600 8twb:2 (3.2) BS02 AGS N/A GO:0000076 ... P40348 39088616

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).