SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    888801 8uu6:m (3.3) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    888802 8uu6:n (3.3) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    888803 8uu6:n (3.3) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    888804 8uu6:o (3.3) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    888805 8uu6:o (3.3) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    888806 8uu6:p (3.3) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    888807 8uu6:q (3.3) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    888808 8uu6:q (3.3) BS02 MG ? GO:0003735 ... A0A0U5ADR4 38407413
    888809 8uu6:r (3.3) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    888810 8uu6:s (3.3) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    888811 8uu6:t (3.3) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    888812 8uu7:1 (3.2) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    888813 8uu7:2 (3.2) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    888814 8uu7:3 (3.2) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    888815 8uu7:4 (3.2) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    888816 8uu7:4 (3.2) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    888817 8uu7:5 (3.2) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    888818 8uu7:5 (3.2) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    888819 8uu7:6 (3.2) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    888820 8uu7:7 (3.2) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    888821 8uu7:8 (3.2) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    888822 8uu7:8 (3.2) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    888823 8uu7:C (3.2) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    888824 8uu7:D (3.2) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    888825 8uu7:E (3.2) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    888826 8uu7:F (3.2) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    888827 8uu7:F (3.2) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    888828 8uu7:G (3.2) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    888829 8uu7:L (3.2) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    888830 8uu7:M (3.2) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    888831 8uu7:M (3.2) BS02 rna ? GO:0003735 ... A0A0U5AP82 38407413
    888832 8uu7:N (3.2) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    888833 8uu7:O (3.2) BS01 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    888834 8uu7:P (3.2) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    888835 8uu7:Q (3.2) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    888836 8uu7:Q (3.2) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    888837 8uu7:R (3.2) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    888838 8uu7:R (3.2) BS02 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    888839 8uu7:S (3.2) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    888840 8uu7:T (3.2) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    888841 8uu7:U (3.2) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    888842 8uu7:V (3.2) BS01 rna ? GO:0003735 ... A0A0U4MTC5 38407413
    888843 8uu7:W (3.2) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    888844 8uu7:Y (3.2) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    888845 8uu7:Y (3.2) BS02 rna ? GO:0003735 ... A0A660JMC7 38407413
    888846 8uu7:Z (3.2) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    888847 8uu7:b (3.2) BS01 rna N/A GO:0003735 ... N/A 38407413
    888848 8uu7:c (3.2) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    888849 8uu7:d (3.2) BS01 rna N/A GO:0003723 ... N/A 38407413
    888850 8uu7:e (3.2) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    888851 8uu7:f (3.2) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    888852 8uu7:g (3.2) BS01 rna ? GO:0000049 ... A0A660JPE1 38407413
    888853 8uu7:g (3.2) BS02 rna ? GO:0000049 ... A0A660JPE1 38407413
    888854 8uu7:h (3.2) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    888855 8uu7:i (3.2) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    888856 8uu7:j (3.2) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    888857 8uu7:j (3.2) BS02 MG ? GO:0000049 ... A0A0U5A730 38407413
    888858 8uu7:k (3.2) BS01 rna ? GO:0003735 ... A0A0U5AP31 38407413
    888859 8uu7:l (3.2) BS01 rna ? GO:0000049 ... A0A660JM56 38407413
    888860 8uu7:m (3.2) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    888861 8uu7:n (3.2) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    888862 8uu7:n (3.2) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    888863 8uu7:o (3.2) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    888864 8uu7:o (3.2) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    888865 8uu7:p (3.2) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    888866 8uu7:q (3.2) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    888867 8uu7:r (3.2) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    888868 8uu7:s (3.2) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    888869 8uu7:t (3.2) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    888870 8uu7:v (3.2) BS01 rna ? GO:0003924 ... Q8Y8Y0 38407413
    888871 8uu7:w (3.2) BS01 rna ? GO:0005737 ... A0A660JMK7 38407413
    888872 8uu8:1 (3.1) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    888873 8uu8:2 (3.1) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    888874 8uu8:3 (3.1) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    888875 8uu8:4 (3.1) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    888876 8uu8:4 (3.1) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    888877 8uu8:5 (3.1) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    888878 8uu8:5 (3.1) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    888879 8uu8:6 (3.1) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    888880 8uu8:7 (3.1) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    888881 8uu8:8 (3.1) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    888882 8uu8:8 (3.1) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    888883 8uu8:C (3.1) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    888884 8uu8:C (3.1) BS02 MG ? GO:0002181 ... A0A0U5A742 38407413
    888885 8uu8:D (3.1) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    888886 8uu8:E (3.1) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    888887 8uu8:F (3.1) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    888888 8uu8:F (3.1) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    888889 8uu8:G (3.1) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    888890 8uu8:H (3.1) BS01 rna ? GO:0003735 ... A0A660JML6 38407413
    888891 8uu8:I (3.1) BS01 rna ? GO:0003735 ... A0A0U5A6T9 38407413
    888892 8uu8:L (3.1) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    888893 8uu8:M (3.1) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    888894 8uu8:M (3.1) BS02 rna ? GO:0003735 ... A0A0U5AP82 38407413
    888895 8uu8:N (3.1) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    888896 8uu8:O (3.1) BS01 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    888897 8uu8:O (3.1) BS02 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    888898 8uu8:P (3.1) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    888899 8uu8:Q (3.1) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    888900 8uu8:Q (3.1) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    888901 8uu8:R (3.1) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    888902 8uu8:R (3.1) BS02 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    888903 8uu8:S (3.1) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    888904 8uu8:T (3.1) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    888905 8uu8:U (3.1) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    888906 8uu8:V (3.1) BS01 rna ? GO:0003735 ... A0A0U4MTC5 38407413
    888907 8uu8:W (3.1) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    888908 8uu8:Y (3.1) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    888909 8uu8:Y (3.1) BS02 rna ? GO:0003735 ... A0A660JMC7 38407413
    888910 8uu8:Z (3.1) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    888911 8uu8:b (3.1) BS01 rna N/A GO:0003735 ... N/A 38407413
    888912 8uu8:b (3.1) BS02 MG N/A GO:0003735 ... N/A 38407413
    888913 8uu8:c (3.1) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    888914 8uu8:d (3.1) BS01 rna N/A GO:0003723 ... N/A 38407413
    888915 8uu8:e (3.1) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    888916 8uu8:f (3.1) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    888917 8uu8:g (3.1) BS01 rna ? GO:0000049 ... A0A660JPE1 38407413
    888918 8uu8:h (3.1) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    888919 8uu8:i (3.1) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    888920 8uu8:j (3.1) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    888921 8uu8:k (3.1) BS01 rna ? GO:0003735 ... A0A0U5AP31 38407413
    888922 8uu8:l (3.1) BS01 rna ? GO:0000049 ... A0A660JM56 38407413
    888923 8uu8:m (3.1) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    888924 8uu8:n (3.1) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    888925 8uu8:n (3.1) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    888926 8uu8:o (3.1) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    888927 8uu8:o (3.1) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    888928 8uu8:p (3.1) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    888929 8uu8:q (3.1) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    888930 8uu8:r (3.1) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    888931 8uu8:s (3.1) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    888932 8uu8:t (3.1) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    888933 8uu8:v (3.1) BS01 rna ? GO:0003924 ... Q8Y8Y0 38407413
    888934 8uu8:v (3.1) BS02 MG ? GO:0003924 ... Q8Y8Y0 38407413
    888935 8uu9:1 (3.1) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    888936 8uu9:2 (3.1) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    888937 8uu9:3 (3.1) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    888938 8uu9:4 (3.1) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    888939 8uu9:4 (3.1) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    888940 8uu9:5 (3.1) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    888941 8uu9:5 (3.1) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    888942 8uu9:6 (3.1) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    888943 8uu9:7 (3.1) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    888944 8uu9:8 (3.1) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    888945 8uu9:8 (3.1) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    888946 8uu9:C (3.1) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    888947 8uu9:C (3.1) BS02 rna ? GO:0002181 ... A0A0U5A742 38407413
    888948 8uu9:C (3.1) BS03 MG ? GO:0002181 ... A0A0U5A742 38407413
    888949 8uu9:D (3.1) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    888950 8uu9:E (3.1) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    888951 8uu9:F (3.1) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    888952 8uu9:F (3.1) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    888953 8uu9:G (3.1) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    888954 8uu9:L (3.1) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    888955 8uu9:M (3.1) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    888956 8uu9:M (3.1) BS02 rna ? GO:0003735 ... A0A0U5AP82 38407413
    888957 8uu9:N (3.1) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    888958 8uu9:O (3.1) BS01 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    888959 8uu9:O (3.1) BS02 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    888960 8uu9:P (3.1) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    888961 8uu9:Q (3.1) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    888962 8uu9:Q (3.1) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    888963 8uu9:R (3.1) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    888964 8uu9:S (3.1) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    888965 8uu9:T (3.1) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    888966 8uu9:U (3.1) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    888967 8uu9:V (3.1) BS01 rna ? GO:0003735 ... A0A0U4MTC5 38407413
    888968 8uu9:W (3.1) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    888969 8uu9:Y (3.1) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    888970 8uu9:Y (3.1) BS02 rna ? GO:0003735 ... A0A660JMC7 38407413
    888971 8uu9:Z (3.1) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    888972 8uu9:b (3.1) BS01 rna ? GO:0003735 ... Q92B01 38407413
    888973 8uu9:c (3.1) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    888974 8uu9:d (3.1) BS01 rna ? GO:0003723 ... Q92BB2 38407413
    888975 8uu9:e (3.1) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    888976 8uu9:f (3.1) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    888977 8uu9:g (3.1) BS01 rna ? GO:0000049 ... A0A660JPE1 38407413
    888978 8uu9:h (3.1) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    888979 8uu9:i (3.1) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    888980 8uu9:j (3.1) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    888981 8uu9:k (3.1) BS01 rna ? GO:0003735 ... A0A0U5AP31 38407413
    888982 8uu9:l (3.1) BS01 rna ? GO:0000049 ... A0A660JM56 38407413
    888983 8uu9:m (3.1) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    888984 8uu9:n (3.1) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    888985 8uu9:n (3.1) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    888986 8uu9:o (3.1) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    888987 8uu9:o (3.1) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    888988 8uu9:p (3.1) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    888989 8uu9:q (3.1) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    888990 8uu9:r (3.1) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    888991 8uu9:s (3.1) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    888992 8uu9:t (3.1) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    888993 8uu9:v (3.1) BS01 rna ? GO:0003924 ... Q8Y8Y0 38407413
    888994 8uu9:v (3.1) BS02 MG ? GO:0003924 ... Q8Y8Y0 38407413
    888995 8uua:1 (2.7) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    888996 8uua:2 (2.7) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    888997 8uua:3 (2.7) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    888998 8uua:4 (2.7) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    888999 8uua:4 (2.7) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    889000 8uua:5 (2.7) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).