SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    888801 8tyn:c (3.26) BS01 GDP 3.6.5.5 GO:0003924 ... Q05193 38663399
    888802 8tyn:f (3.26) BS01 GDP 3.6.5.5 GO:0003924 ... Q05193 38663399
    888803 8typ:A (1.8) BS01 SQT 3.4.21.42 GO:0004252 ... P09871 38149922
    888804 8tyq:A (2.99) BS01 T3X 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38039358
    888805 8tys:A (2.9) BS01 CL ? GO:0005201 ... P08120 37890775
    888806 8tys:C (2.9) BS01 CL ? GO:0005201 ... P08120 37890775
    888807 8tys:D (2.9) BS01 CL ? GO:0005201 ... P08120 37890775
    888808 8tys:F (2.9) BS01 CL ? GO:0005201 ... P08120 37890775
    888809 8tyv:A (1.85) BS01 I8P ? N/A Q9UBH6 38833370
    888810 8tyv:B (1.85) BS01 I8P ? N/A Q9UBH6 38833370
    888811 8tyx:B (1.36) BS01 ZN N/A N/A N/A 39020180
    888812 8tyy:B (1.68) BS01 ZN N/A N/A N/A 39020180
    888813 8tyz:A (2.68) BS01 ZN N/A GO:0008641 ... A0AAT8XUH4 39020180
    888814 8tz0:A (2.47) BS01 ZN N/A GO:0008641 ... A0AAT8XUH4 39020180
    888815 8tz0:B (2.47) BS01 ZN N/A GO:0008641 ... A0AAT8XUH4 39020180
    888816 8tz1:A (2.54) BS01 RBV ? GO:0005337 ... F1MGR1 38418906
    888817 8tz1:A (2.54) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888818 8tz1:A (2.54) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888819 8tz1:A (2.54) BS04 LBN ? GO:0005337 ... F1MGR1 38418906
    888820 8tz1:A (2.54) BS05 LBN ? GO:0005337 ... F1MGR1 38418906
    888821 8tz1:B (2.54) BS01 RBV ? GO:0005337 ... F1MGR1 38418906
    888822 8tz1:B (2.54) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888823 8tz1:B (2.54) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888824 8tz1:B (2.54) BS04 LBN ? GO:0005337 ... F1MGR1 38418906
    888825 8tz1:B (2.54) BS05 LBN ? GO:0005337 ... F1MGR1 38418906
    888826 8tz1:C (2.54) BS01 RBV ? GO:0005337 ... F1MGR1 38418906
    888827 8tz1:C (2.54) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888828 8tz1:C (2.54) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888829 8tz1:C (2.54) BS04 LBN ? GO:0005337 ... F1MGR1 38418906
    888830 8tz1:C (2.54) BS05 LBN ? GO:0005337 ... F1MGR1 38418906
    888831 8tz2:A (2.8) BS01 LBN ? GO:0005337 ... F1MGR1 38418906
    888832 8tz2:A (2.8) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888833 8tz2:B (2.8) BS01 LBN ? GO:0005337 ... F1MGR1 38418906
    888834 8tz2:B (2.8) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888835 8tz2:C (2.8) BS01 LBN ? GO:0005337 ... F1MGR1 38418906
    888836 8tz2:C (2.8) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888837 8tz3:A (2.31) BS01 LBN ? GO:0005337 ... F1MGR1 38418906
    888838 8tz3:A (2.31) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888839 8tz3:A (2.31) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888840 8tz3:B (2.31) BS01 LBN ? GO:0005337 ... F1MGR1 38418906
    888841 8tz3:B (2.31) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888842 8tz3:B (2.31) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888843 8tz3:C (2.31) BS01 LBN ? GO:0005337 ... F1MGR1 38418906
    888844 8tz3:C (2.31) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888845 8tz3:C (2.31) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888846 8tz4:A (3.23) BS01 U08 ? GO:0005337 ... F1MGR1 38418906
    888847 8tz5:A (2.74) BS01 U56 ? GO:0005337 ... F1MGR1 38418906
    888848 8tz5:A (2.74) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888849 8tz5:A (2.74) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888850 8tz5:A (2.74) BS04 LBN ? GO:0005337 ... F1MGR1 38418906
    888851 8tz5:A (2.74) BS05 LBN ? GO:0005337 ... F1MGR1 38418906
    888852 8tz5:B (2.74) BS01 U56 ? GO:0005337 ... F1MGR1 38418906
    888853 8tz5:B (2.74) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888854 8tz5:B (2.74) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888855 8tz5:B (2.74) BS04 LBN ? GO:0005337 ... F1MGR1 38418906
    888856 8tz5:B (2.74) BS05 LBN ? GO:0005337 ... F1MGR1 38418906
    888857 8tz5:C (2.74) BS01 U56 ? GO:0005337 ... F1MGR1 38418906
    888858 8tz5:C (2.74) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888859 8tz5:C (2.74) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888860 8tz5:C (2.74) BS04 LBN ? GO:0005337 ... F1MGR1 38418906
    888861 8tz5:C (2.74) BS05 LBN ? GO:0005337 ... F1MGR1 38418906
    888862 8tz6:A (2.69) BS01 U7I ? GO:0005337 ... F1MGR1 38418906
    888863 8tz6:A (2.69) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888864 8tz6:A (2.69) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888865 8tz6:A (2.69) BS04 LBN ? GO:0005337 ... F1MGR1 38418906
    888866 8tz6:B (2.69) BS01 U7I ? GO:0005337 ... F1MGR1 38418906
    888867 8tz6:B (2.69) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888868 8tz6:B (2.69) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888869 8tz6:B (2.69) BS04 LBN ? GO:0005337 ... F1MGR1 38418906
    888870 8tz6:C (2.69) BS01 U7I ? GO:0005337 ... F1MGR1 38418906
    888871 8tz6:C (2.69) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888872 8tz6:C (2.69) BS03 LBN ? GO:0005337 ... F1MGR1 38418906
    888873 8tz6:C (2.69) BS04 LBN ? GO:0005337 ... F1MGR1 38418906
    888874 8tz7:A (3.0) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888875 8tz7:A (3.0) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888876 8tz7:B (3.0) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888877 8tz7:B (3.0) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888878 8tz7:C (3.0) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888879 8tz7:C (3.0) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888880 8tz8:A (3.19) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888881 8tz8:A (3.19) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888882 8tz8:B (3.19) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888883 8tz8:C (3.19) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888884 8tz8:C (3.19) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888885 8tz9:A (3.67) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888886 8tz9:B (3.67) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888887 8tz9:C (3.67) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888888 8tza:A (3.43) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888889 8tza:B (3.43) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888890 8tza:C (3.43) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888891 8tzb:A (3.1) BS01 T3X 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38039358
    888892 8tzc:A (2.7) BS01 A1N 2.7.11.1
    3.6.5.-
    GO:0004672 ... Q5S007 38039358
    888893 8tzc:A (2.7) BS02 GDP 2.7.11.1
    3.6.5.-
    GO:0004672 ... Q5S007 38039358
    888894 8tzd:A (3.2) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888895 8tzd:A (3.2) BS02 LBN ? GO:0005337 ... F1MGR1 38418906
    888896 8tzd:B (3.2) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888897 8tzd:C (3.2) BS01 XMO ? GO:0005337 ... F1MGR1 38418906
    888898 8tze:A (2.9) BS01 T3X 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38039358
    888899 8tzf:A (3.4) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38039358
    888900 8tzf:A (3.4) BS02 T3X 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38039358
    888901 8tzg:A (2.7) BS01 A1N 2.7.11.1
    3.6.5.-
    GO:0004672 ... Q5S007 38039358
    888902 8tzg:A (2.7) BS02 GDP 2.7.11.1
    3.6.5.-
    GO:0004672 ... Q5S007 38039358
    888903 8tzg:A (2.7) BS03 MG 2.7.11.1
    3.6.5.-
    GO:0004672 ... Q5S007 38039358
    888904 8tzh:A (3.9) BS01 A1N 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38039358
    888905 8tzh:A (3.9) BS02 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38039358
    888906 8tzi:A (2.7) BS01 U00 N/A GO:0001504 ... Q99808 39737929
    888907 8tzj:A (3.51) BS01 ADP ? GO:0005524 ... Q9KVJ5 38070498
    888908 8tzj:B (3.51) BS01 ADP ? GO:0005524 ... Q9KVJ5 38070498
    888909 8tzk:A (3.55) BS01 ADP ? GO:0005524 ... Q9KVJ5 38070498
    888910 8tzk:B (3.55) BS01 ADP ? GO:0005524 ... Q9KVJ5 38070498
    888911 8tzl:A (3.55) BS01 ADP ? GO:0005524 ... A0A085R4L6 38070498
    888912 8tzl:B (3.55) BS01 ADP ? GO:0005524 ... A0A085R4L6 38070498
    888913 8tzo:C (3.1) BS01 BMA ? GO:0005509 ... P27797 37852257
    888914 8tzo:C (3.1) BS02 MAN ? GO:0005509 ... P27797 37852257
    888915 8tzo:C (3.1) BS03 MAN ? GO:0005509 ... P27797 37852257
    888916 8tzo:C (3.1) BS04 GLC ? GO:0005509 ... P27797 37852257
    888917 8tzo:C (3.1) BS05 CA ? GO:0005509 ... P27797 37852257
    888918 8tzq:R (3.2) BS01 LDP N/A GO:0000139 ... P14416 39103320
    888919 8tzr:C (3.5) BS01 BMA ? GO:0005509 ... P27797 37852257
    888920 8tzr:C (3.5) BS02 MAN ? GO:0005509 ... P27797 37852257
    888921 8tzr:C (3.5) BS03 MAN ? GO:0005509 ... P27797 37852257
    888922 8tzv:B (2.8) BS01 ZN N/A GO:0004057 ... O95260 39068213
    888923 8tzx:A (3.15) BS01 peptide N/A N/A Q96SW2 38963839
    888924 8tzx:A (3.15) BS02 ZN N/A N/A Q96SW2 38963839
    888925 8tzx:A (3.15) BS03 U3I N/A N/A Q96SW2 38963839
    888926 8tzx:D (3.15) BS01 peptide N/A N/A Q96SW2 38963839
    888927 8tzx:D (3.15) BS02 ZN N/A N/A Q96SW2 38963839
    888928 8tzx:D (3.15) BS03 U3I N/A N/A Q96SW2 38963839
    888929 8tzz:A (3.56) BS01 rna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    888930 8tzz:A (3.56) BS02 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    888931 8tzz:A (3.56) BS03 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    888932 8tzz:A (3.56) BS04 dna 3.1.-.- GO:0003676 ... Q99ZW2 38688943
    888933 8u00:A (1.85) BS01 ZN ? GO:0008800 ... Q9A6F5 N/A
    888934 8u00:A (1.85) BS02 ZN ? GO:0008800 ... Q9A6F5 N/A
    888935 8u00:A (1.85) BS03 ZN ? GO:0008800 ... Q9A6F5 N/A
    888936 8u00:B (1.85) BS01 ZN ? GO:0008800 ... Q9A6F5 N/A
    888937 8u00:B (1.85) BS02 ZN ? GO:0008800 ... Q9A6F5 N/A
    888938 8u00:B (1.85) BS03 ZN ? GO:0008800 ... Q9A6F5 N/A
    888939 8u02:R (3.28) BS01 LDP N/A GO:0000139 ... P14416 39103320
    888940 8u05:A (1.62) BS01 NAP N/A GO:0016491 ... A0ACD6B8T4 38199566
    888941 8u05:B (1.62) BS01 NAP N/A GO:0016491 ... A0ACD6B8T4 38199566
    888942 8u06:A (1.6) BS01 NAP N/A GO:0016491 ... A0ACD6B8T4 38199566
    888943 8u06:A (1.6) BS02 A7F N/A GO:0016491 ... A0ACD6B8T4 38199566
    888944 8u06:A (1.6) BS03 A7F N/A GO:0016491 ... A0ACD6B8T4 38199566
    888945 8u06:B (1.6) BS01 A7F N/A GO:0016491 ... A0ACD6B8T4 38199566
    888946 8u06:B (1.6) BS02 NAP N/A GO:0016491 ... A0ACD6B8T4 38199566
    888947 8u06:B (1.6) BS03 A7F N/A GO:0016491 ... A0ACD6B8T4 38199566
    888948 8u07:A (1.63) BS01 A7F N/A GO:0016491 ... A0ACD6B8T4 38199566
    888949 8u07:A (1.63) BS02 NAP N/A GO:0016491 ... A0ACD6B8T4 38199566
    888950 8u07:A (1.63) BS03 A7F N/A GO:0016491 ... A0ACD6B8T4 38199566
    888951 8u07:B (1.63) BS01 A7F N/A GO:0016491 ... A0ACD6B8T4 38199566
    888952 8u07:B (1.63) BS02 NAP N/A GO:0016491 ... A0ACD6B8T4 38199566
    888953 8u07:B (1.63) BS03 A7F N/A GO:0016491 ... A0ACD6B8T4 38199566
    888954 8u09:A (1.98) BS01 HEM N/A GO:0004497 ... A0AAX7FLX8 39979323
    888955 8u0f:C (2.07) BS01 PUB N/A GO:0009535 ... Q1AH60 N/A
    888956 8u0f:L (2.07) BS01 PUB N/A GO:0009535 ... Q1AH60 N/A
    888957 8u0h:A (1.93) BS01 UB0 N/A GO:0004725 ... P17706 39152201
    888958 8u0h:B (1.93) BS01 UB0 N/A GO:0004725 ... P17706 39152201
    888959 8u0i:A (1.541) BS01 C2E N/A GO:0035438 ... Q9I7B4 N/A
    888960 8u0i:A (1.541) BS02 C2E N/A GO:0035438 ... Q9I7B4 N/A
    888961 8u0j:A (3.1) BS01 dna N/A N/A Q9KR73 38740055
    888962 8u0j:A (3.1) BS02 dna N/A N/A Q9KR73 38740055
    888963 8u0j:A (3.1) BS03 dna N/A N/A Q9KR73 38740055
    888964 8u0k:A (2.5) BS01 ADP 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888965 8u0k:A (2.5) BS02 4LR 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888966 8u0k:B (2.5) BS01 ADP 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888967 8u0k:B (2.5) BS02 4LR 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888968 8u0l:A (2.8) BS01 ADP 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888969 8u0l:A (2.8) BS02 U4R 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888970 8u0l:B (2.8) BS01 ADP 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888971 8u0l:B (2.8) BS02 U4R 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888972 8u0m:A (2.54) BS01 ADP 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888973 8u0m:A (2.54) BS02 U5O 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888974 8u0m:B (2.54) BS01 ATP 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888975 8u0m:B (2.54) BS02 U5O 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888976 8u0n:A (2.5) BS01 ADP 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888977 8u0n:A (2.5) BS02 U69 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888978 8u0n:B (2.5) BS01 U69 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888979 8u0n:B (2.5) BS02 ADP 2.7.4.26 GO:0005829 ... W0I5G2 38333996
    888980 8u0o:A (2.05) BS01 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 38428373
    888981 8u0o:A (2.05) BS02 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 38428373
    888982 8u0p:A (1.9) BS01 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 38428373
    888983 8u0p:A (1.9) BS02 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 38428373
    888984 8u0p:A (1.9) BS03 dna 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 38428373
    888985 8u0p:A (1.9) BS04 MG 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 38428373
    888986 8u0p:A (1.9) BS05 MG 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 38428373
    888987 8u0p:A (1.9) BS06 DUP 2.7.7.7
    4.2.99.-
    GO:0003677 ... Q9UGP5 38428373
    888988 8u0q:A (1.69) BS01 FAD 1.8.1.4 GO:0004148 ... P9WHH9 38144256
    888989 8u0q:A (1.69) BS02 U4I 1.8.1.4 GO:0004148 ... P9WHH9 38144256
    888990 8u0q:A (1.69) BS03 U4I 1.8.1.4 GO:0004148 ... P9WHH9 38144256
    888991 8u0q:B (1.69) BS01 U4I 1.8.1.4 GO:0004148 ... P9WHH9 38144256
    888992 8u0q:B (1.69) BS02 U4I 1.8.1.4 GO:0004148 ... P9WHH9 38144256
    888993 8u0q:B (1.69) BS03 FAD 1.8.1.4 GO:0004148 ... P9WHH9 38144256
    888994 8u0r:D (2.3) BS01 PDO N/A N/A P68711 40118206
    888995 8u0t:A (3.2) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... A0A0N7IQX6 37989312
    888996 8u0u:A (3.04) BS01 dna N/A N/A Q9KR72 38740055
    888997 8u0u:F (3.04) BS01 dna N/A N/A Q9KR72 38740055
    888998 8u0v:A (3.89) BS01 ATP 3.6.4.- GO:0005515 ... P24004 38036174
    888999 8u0v:A (3.89) BS02 ATP 3.6.4.- GO:0005515 ... P24004 38036174
    889000 8u0v:B (3.89) BS01 ATP 3.6.4.- GO:0005515 ... P33760 38036174

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).