SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    889601 8u7q:B (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889602 8u7q:C (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889603 8u7q:C (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889604 8u7q:C (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889605 8u7q:C (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889606 8u7q:C (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889607 8u7q:D (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889608 8u7q:D (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889609 8u7q:D (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889610 8u7q:D (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889611 8u7q:D (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889612 8u7q:E (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889613 8u7q:E (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889614 8u7q:E (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889615 8u7q:E (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889616 8u7q:E (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889617 8u7q:F (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889618 8u7q:F (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889619 8u7q:F (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889620 8u7q:F (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889621 8u7q:F (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889622 8u7q:G (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889623 8u7q:G (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889624 8u7q:G (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889625 8u7q:G (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889626 8u7q:G (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889627 8u7q:H (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889628 8u7q:H (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889629 8u7q:H (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889630 8u7q:H (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889631 8u7q:H (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889632 8u7r:A (3.7) BS01 AJP N/A GO:0005216 ... A3RL54 N/A
    889633 8u7r:B (3.7) BS01 AJP N/A GO:0005216 ... A3RL54 N/A
    889634 8u7t:A (3.3) BS01 peptide N/A GO:0000837 ... P25694 39209885
    889635 8u7t:A (3.3) BS02 08T N/A GO:0000837 ... P25694 39209885
    889636 8u7t:A (3.3) BS03 08T N/A GO:0000837 ... P25694 39209885
    889637 8u7t:B (3.3) BS01 peptide N/A GO:0000837 ... P25694 39209885
    889638 8u7t:B (3.3) BS02 08T N/A GO:0000837 ... P25694 39209885
    889639 8u7t:B (3.3) BS03 08T N/A GO:0000837 ... P25694 39209885
    889640 8u7t:B (3.3) BS04 08T N/A GO:0000837 ... P25694 39209885
    889641 8u7t:C (3.3) BS01 peptide N/A GO:0000837 ... P25694 39209885
    889642 8u7t:C (3.3) BS02 08T N/A GO:0000837 ... P25694 39209885
    889643 8u7t:C (3.3) BS03 08T N/A GO:0000837 ... P25694 39209885
    889644 8u7t:C (3.3) BS04 08T N/A GO:0000837 ... P25694 39209885
    889645 8u7t:C (3.3) BS05 08T N/A GO:0000837 ... P25694 39209885
    889646 8u7t:D (3.3) BS01 peptide N/A GO:0000837 ... P25694 39209885
    889647 8u7t:D (3.3) BS02 08T N/A GO:0000837 ... P25694 39209885
    889648 8u7t:D (3.3) BS03 08T N/A GO:0000837 ... P25694 39209885
    889649 8u7t:D (3.3) BS04 08T N/A GO:0000837 ... P25694 39209885
    889650 8u7t:E (3.3) BS01 peptide N/A GO:0000837 ... P25694 39209885
    889651 8u7t:E (3.3) BS02 08T N/A GO:0000837 ... P25694 39209885
    889652 8u7t:E (3.3) BS03 ADP N/A GO:0000837 ... P25694 39209885
    889653 8u7t:E (3.3) BS04 ADP N/A GO:0000837 ... P25694 39209885
    889654 8u7v:A (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889655 8u7v:A (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889656 8u7v:A (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889657 8u7v:A (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889658 8u7v:A (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889659 8u7v:B (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889660 8u7v:B (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889661 8u7v:B (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889662 8u7v:B (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889663 8u7v:B (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889664 8u7v:C (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889665 8u7v:C (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889666 8u7v:C (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889667 8u7v:C (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889668 8u7v:C (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889669 8u7v:D (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889670 8u7v:D (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889671 8u7v:D (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889672 8u7v:D (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889673 8u7v:D (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889674 8u7v:E (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889675 8u7v:E (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889676 8u7v:E (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889677 8u7v:E (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889678 8u7v:E (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889679 8u7v:F (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889680 8u7v:F (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889681 8u7v:F (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889682 8u7v:F (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889683 8u7v:F (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889684 8u7v:G (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889685 8u7v:G (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889686 8u7v:G (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889687 8u7v:G (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889688 8u7v:G (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889689 8u7v:H (3.3) BS01 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889690 8u7v:H (3.3) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889691 8u7v:H (3.3) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889692 8u7v:H (3.3) BS04 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889693 8u7v:H (3.3) BS05 GTP 1.1.1.205 GO:0000166 ... P20839 38323936
    889694 8u7w:A (2.05) BS01 W8I 3.1.3.48 GO:0004725 ... Q06124 38116446
    889695 8u7w:B (2.05) BS01 W8I 3.1.3.48 GO:0004725 ... Q06124 38116446
    889696 8u7x:A (2.06) BS01 WAB 3.1.3.48 GO:0004725 ... Q06124 38116446
    889697 8u7x:B (2.06) BS01 WAB 3.1.3.48 GO:0004725 ... Q06124 38116446
    889698 8u7y:A (4.06) BS01 FAD 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889699 8u7y:A (4.06) BS02 NAP 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889700 8u7y:A (4.06) BS03 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889701 8u7y:A (4.06) BS04 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889702 8u7y:B (4.06) BS01 FAD 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889703 8u7y:B (4.06) BS02 NAP 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889704 8u7y:B (4.06) BS03 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889705 8u7y:B (4.06) BS04 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889706 8u85:A (3.2) BS01 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889707 8u85:A (3.2) BS02 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889708 8u85:A (3.2) BS03 NDP 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889709 8u85:A (3.2) BS04 FAD 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889710 8u85:A (3.2) BS05 ZN 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889711 8u85:C (3.2) BS01 ZN 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889712 8u85:C (3.2) BS02 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889713 8u85:C (3.2) BS03 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889714 8u85:C (3.2) BS04 NDP 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889715 8u85:C (3.2) BS05 FAD 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889716 8u86:A (3.3) BS01 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889717 8u86:A (3.3) BS02 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889718 8u86:A (3.3) BS03 NDP 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889719 8u86:A (3.3) BS04 FAD 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889720 8u86:C (3.3) BS01 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889721 8u86:C (3.3) BS02 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889722 8u86:C (3.3) BS03 NDP 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889723 8u86:C (3.3) BS04 FAD 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889724 8u87:A (3.86) BS01 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889725 8u87:A (3.86) BS02 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889726 8u87:A (3.86) BS03 NDP 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889727 8u87:A (3.86) BS04 FAD 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889728 8u87:A (3.86) BS05 ZN 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889729 8u87:C (3.86) BS01 ZN 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889730 8u87:C (3.86) BS02 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889731 8u87:C (3.86) BS03 HEB 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889732 8u87:C (3.86) BS04 NDP 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889733 8u87:C (3.86) BS05 FAD 1.6.3.- GO:0001819 ... Q96PH1 38734761
    889734 8u89:C (3.3) BS01 MN 3.1.3.16 GO:0000159 ... P67775 38150499
    889735 8u89:C (3.3) BS02 MN 3.1.3.16 GO:0000159 ... P67775 38150499
    889736 8u8a:B (3.4) BS01 0LI 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    889737 8u8a:B (3.4) BS02 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    889738 8u8a:C (3.4) BS01 0LI 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    889739 8u8a:C (3.4) BS02 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    889740 8u8b:A (3.7) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    889741 8u8b:A (3.7) BS02 919 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    889742 8u8b:B (3.7) BS01 GDP 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    889743 8u8b:B (3.7) BS02 919 2.7.11.1
    3.6.5.-
    GO:0000139 ... Q5S007 38263358
    889744 8u8c:A (2.4) BS01 peptide N/A N/A P46674 39862860
    889745 8u8c:B (2.4) BS01 peptide N/A GO:0000282 ... Q08231 39862860
    889746 8u8d:B (3.04) BS01 peptide N/A GO:0000282 ... Q08231 39862860
    889747 8u8i:A (3.5) BS01 peptide N/A GO:0000837 ... P25694 39209885
    889748 8u8i:A (3.5) BS02 08T N/A GO:0000837 ... P25694 39209885
    889749 8u8i:A (3.5) BS03 08T N/A GO:0000837 ... P25694 39209885
    889750 8u8i:B (3.5) BS01 peptide N/A GO:0000837 ... P25694 39209885
    889751 8u8i:B (3.5) BS02 08T N/A GO:0000837 ... P25694 39209885
    889752 8u8i:B (3.5) BS03 08T N/A GO:0000837 ... P25694 39209885
    889753 8u8i:C (3.5) BS01 peptide N/A GO:0000837 ... P25694 39209885
    889754 8u8i:C (3.5) BS02 08T N/A GO:0000837 ... P25694 39209885
    889755 8u8i:C (3.5) BS03 08T N/A GO:0000837 ... P25694 39209885
    889756 8u8i:C (3.5) BS04 08T N/A GO:0000837 ... P25694 39209885
    889757 8u8i:C (3.5) BS05 08T N/A GO:0000837 ... P25694 39209885
    889758 8u8i:D (3.5) BS01 peptide N/A GO:0000837 ... P25694 39209885
    889759 8u8i:D (3.5) BS02 08T N/A GO:0000837 ... P25694 39209885
    889760 8u8i:D (3.5) BS03 08T N/A GO:0000837 ... P25694 39209885
    889761 8u8i:D (3.5) BS04 08T N/A GO:0000837 ... P25694 39209885
    889762 8u8i:D (3.5) BS05 08T N/A GO:0000837 ... P25694 39209885
    889763 8u8i:E (3.5) BS01 peptide N/A GO:0000837 ... P25694 39209885
    889764 8u8i:E (3.5) BS02 08T N/A GO:0000837 ... P25694 39209885
    889765 8u8i:E (3.5) BS03 08T N/A GO:0000837 ... P25694 39209885
    889766 8u8i:E (3.5) BS04 ADP N/A GO:0000837 ... P25694 39209885
    889767 8u8i:E (3.5) BS05 ADP N/A GO:0000837 ... P25694 39209885
    889768 8u8j:A (2.1) BS01 WAL 2.7.11.24 GO:0000165 ... P28482 38537148
    889769 8u8k:A (2.1) BS01 W8U 2.7.11.24 GO:0000165 ... P28482 38537148
    889770 8u8l:A (2.2) BS01 dna ? N/A Q22429 38588418
    889771 8u8l:A (2.2) BS02 dna ? N/A Q22429 38588418
    889772 8u8l:B (2.2) BS01 dna ? N/A Q22429 38588418
    889773 8u8l:B (2.2) BS02 dna ? N/A Q22429 38588418
    889774 8u8m:A (2.7) BS01 CO ? N/A O62329 38588418
    889775 8u8m:B (2.7) BS01 CO ? N/A O62329 38588418
    889776 8u8m:C (2.7) BS01 CO ? N/A O62329 38588418
    889777 8u8m:D (2.7) BS01 CO ? N/A O62329 38588418
    889778 8u8o:A (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889779 8u8o:A (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889780 8u8o:A (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889781 8u8o:A (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889782 8u8o:B (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889783 8u8o:B (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889784 8u8o:B (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889785 8u8o:B (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889786 8u8o:C (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889787 8u8o:C (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889788 8u8o:C (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889789 8u8o:C (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889790 8u8o:D (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889791 8u8o:D (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889792 8u8o:D (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889793 8u8o:D (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889794 8u8o:E (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889795 8u8o:E (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889796 8u8o:E (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889797 8u8o:E (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889798 8u8o:F (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889799 8u8o:F (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889800 8u8o:F (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).