SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    889801 8u8o:F (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889802 8u8o:G (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889803 8u8o:G (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889804 8u8o:G (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889805 8u8o:G (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889806 8u8o:H (2.4) BS01 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889807 8u8o:H (2.4) BS02 ATP 1.1.1.205 GO:0000166 ... P20839 38323936
    889808 8u8o:H (2.4) BS03 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889809 8u8o:H (2.4) BS04 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889810 8u8p:A (2.2) BS01 CU ? GO:0005507 ... Q9XAL8 37926680
    889811 8u8p:A (2.2) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889812 8u8p:A (2.2) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889813 8u8p:A (2.2) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    889814 8u8p:A (2.2) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    889815 8u8p:A (2.2) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889816 8u8p:A (2.2) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889817 8u8p:A (2.2) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889818 8u8p:A (2.2) BS09 CU ? GO:0005507 ... Q9XAL8 37926680
    889819 8u8p:A (2.2) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    889820 8u8p:A (2.2) BS11 GLY ? GO:0005507 ... Q9XAL8 37926680
    889821 8u8p:B (2.2) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    889822 8u8p:B (2.2) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889823 8u8p:B (2.2) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889824 8u8p:B (2.2) BS04 CU ? GO:0005507 ... Q9XAL8 37926680
    889825 8u8p:B (2.2) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    889826 8u8p:B (2.2) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889827 8u8p:B (2.2) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889828 8u8p:B (2.2) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889829 8u8p:B (2.2) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    889830 8u8p:B (2.2) BS10 CU ? GO:0005507 ... Q9XAL8 37926680
    889831 8u8p:B (2.2) BS11 GLY ? GO:0005507 ... Q9XAL8 37926680
    889832 8u8p:C (2.2) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    889833 8u8p:C (2.2) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889834 8u8p:C (2.2) BS03 GLY ? GO:0005507 ... Q9XAL8 37926680
    889835 8u8p:C (2.2) BS04 CU ? GO:0005507 ... Q9XAL8 37926680
    889836 8u8p:C (2.2) BS05 CU ? GO:0005507 ... Q9XAL8 37926680
    889837 8u8p:C (2.2) BS06 CU ? GO:0005507 ... Q9XAL8 37926680
    889838 8u8p:C (2.2) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889839 8u8p:C (2.2) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889840 8u8p:C (2.2) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    889841 8u8p:C (2.2) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    889842 8u8p:C (2.2) BS11 GLY ? GO:0005507 ... Q9XAL8 37926680
    889843 8u8q:A (2.7) BS01 CU ? GO:0005507 ... Q9XAL8 37926680
    889844 8u8q:A (2.7) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889845 8u8q:A (2.7) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889846 8u8q:A (2.7) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    889847 8u8q:A (2.7) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    889848 8u8q:A (2.7) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889849 8u8q:A (2.7) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889850 8u8q:A (2.7) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889851 8u8q:A (2.7) BS09 CU ? GO:0005507 ... Q9XAL8 37926680
    889852 8u8q:A (2.7) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    889853 8u8q:B (2.7) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    889854 8u8q:B (2.7) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889855 8u8q:B (2.7) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889856 8u8q:B (2.7) BS04 CU ? GO:0005507 ... Q9XAL8 37926680
    889857 8u8q:B (2.7) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    889858 8u8q:B (2.7) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889859 8u8q:B (2.7) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889860 8u8q:B (2.7) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889861 8u8q:B (2.7) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    889862 8u8q:B (2.7) BS10 CU ? GO:0005507 ... Q9XAL8 37926680
    889863 8u8q:C (2.7) BS01 CU ? GO:0005507 ... Q9XAL8 37926680
    889864 8u8q:C (2.7) BS02 GLY ? GO:0005507 ... Q9XAL8 37926680
    889865 8u8q:C (2.7) BS03 GLY ? GO:0005507 ... Q9XAL8 37926680
    889866 8u8q:C (2.7) BS04 CU ? GO:0005507 ... Q9XAL8 37926680
    889867 8u8q:C (2.7) BS05 CU ? GO:0005507 ... Q9XAL8 37926680
    889868 8u8q:C (2.7) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889869 8u8q:C (2.7) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889870 8u8q:C (2.7) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889871 8u8q:C (2.7) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    889872 8u8r:A (2.86) BS01 CU ? GO:0005507 ... Q9XAL8 37926680
    889873 8u8r:A (2.86) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889874 8u8r:A (2.86) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889875 8u8r:A (2.86) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    889876 8u8r:A (2.86) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    889877 8u8r:A (2.86) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889878 8u8r:A (2.86) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889879 8u8r:A (2.86) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889880 8u8r:A (2.86) BS09 CU ? GO:0005507 ... Q9XAL8 37926680
    889881 8u8r:A (2.86) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    889882 8u8r:B (2.86) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    889883 8u8r:B (2.86) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889884 8u8r:B (2.86) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889885 8u8r:B (2.86) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    889886 8u8r:B (2.86) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    889887 8u8r:B (2.86) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889888 8u8r:B (2.86) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889889 8u8r:B (2.86) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889890 8u8r:B (2.86) BS09 CU ? GO:0005507 ... Q9XAL8 37926680
    889891 8u8r:C (2.86) BS01 CU ? GO:0005507 ... Q9XAL8 37926680
    889892 8u8r:C (2.86) BS02 GLY ? GO:0005507 ... Q9XAL8 37926680
    889893 8u8r:C (2.86) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889894 8u8r:C (2.86) BS04 CU ? GO:0005507 ... Q9XAL8 37926680
    889895 8u8r:C (2.86) BS05 CU ? GO:0005507 ... Q9XAL8 37926680
    889896 8u8r:C (2.86) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889897 8u8r:C (2.86) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889898 8u8r:C (2.86) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889899 8u8r:C (2.86) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    889900 8u8s:A (2.63) BS01 CU ? GO:0005507 ... Q9XAL8 37926680
    889901 8u8s:A (2.63) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889902 8u8s:A (2.63) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889903 8u8s:A (2.63) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    889904 8u8s:A (2.63) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    889905 8u8s:A (2.63) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889906 8u8s:A (2.63) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889907 8u8s:A (2.63) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889908 8u8s:A (2.63) BS09 CU ? GO:0005507 ... Q9XAL8 37926680
    889909 8u8s:A (2.63) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    889910 8u8s:B (2.63) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    889911 8u8s:B (2.63) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889912 8u8s:B (2.63) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889913 8u8s:B (2.63) BS04 CU ? GO:0005507 ... Q9XAL8 37926680
    889914 8u8s:B (2.63) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    889915 8u8s:B (2.63) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889916 8u8s:B (2.63) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889917 8u8s:B (2.63) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889918 8u8s:B (2.63) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    889919 8u8s:B (2.63) BS10 CU ? GO:0005507 ... Q9XAL8 37926680
    889920 8u8s:C (2.63) BS01 CU ? GO:0005507 ... Q9XAL8 37926680
    889921 8u8s:C (2.63) BS02 GLY ? GO:0005507 ... Q9XAL8 37926680
    889922 8u8s:C (2.63) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889923 8u8s:C (2.63) BS04 CU ? GO:0005507 ... Q9XAL8 37926680
    889924 8u8s:C (2.63) BS05 CU ? GO:0005507 ... Q9XAL8 37926680
    889925 8u8s:C (2.63) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889926 8u8s:C (2.63) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889927 8u8s:C (2.63) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889928 8u8s:C (2.63) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    889929 8u8t:A (2.9) BS01 CU ? GO:0005507 ... Q9XAL8 37926680
    889930 8u8t:A (2.9) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889931 8u8t:A (2.9) BS03 GLY ? GO:0005507 ... Q9XAL8 37926680
    889932 8u8t:A (2.9) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    889933 8u8t:A (2.9) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    889934 8u8t:A (2.9) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889935 8u8t:A (2.9) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889936 8u8t:A (2.9) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889937 8u8t:A (2.9) BS09 CU ? GO:0005507 ... Q9XAL8 37926680
    889938 8u8t:A (2.9) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    889939 8u8t:B (2.9) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    889940 8u8t:B (2.9) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889941 8u8t:B (2.9) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889942 8u8t:B (2.9) BS04 GLY ? GO:0005507 ... Q9XAL8 37926680
    889943 8u8t:B (2.9) BS05 GLY ? GO:0005507 ... Q9XAL8 37926680
    889944 8u8t:B (2.9) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889945 8u8t:B (2.9) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889946 8u8t:B (2.9) BS08 CU ? GO:0005507 ... Q9XAL8 37926680
    889947 8u8t:C (2.9) BS01 GLY ? GO:0005507 ... Q9XAL8 37926680
    889948 8u8t:C (2.9) BS02 CU ? GO:0005507 ... Q9XAL8 37926680
    889949 8u8t:C (2.9) BS03 CU ? GO:0005507 ... Q9XAL8 37926680
    889950 8u8t:C (2.9) BS04 CU ? GO:0005507 ... Q9XAL8 37926680
    889951 8u8t:C (2.9) BS05 CU ? GO:0005507 ... Q9XAL8 37926680
    889952 8u8t:C (2.9) BS06 GLY ? GO:0005507 ... Q9XAL8 37926680
    889953 8u8t:C (2.9) BS07 GLY ? GO:0005507 ... Q9XAL8 37926680
    889954 8u8t:C (2.9) BS08 GLY ? GO:0005507 ... Q9XAL8 37926680
    889955 8u8t:C (2.9) BS09 GLY ? GO:0005507 ... Q9XAL8 37926680
    889956 8u8t:C (2.9) BS10 GLY ? GO:0005507 ... Q9XAL8 37926680
    889957 8u8u:A (2.9) BS01 dna N/A GO:0003676 ... Q96QE5 39164235
    889958 8u8u:B (2.9) BS01 dna N/A GO:0003676 ... Q96QE5 39164235
    889959 8u8u:E (2.9) BS01 rna N/A GO:0000175 ... O00411 39164235
    889960 8u8u:E (2.9) BS02 dna N/A GO:0000175 ... O00411 39164235
    889961 8u8u:E (2.9) BS03 APC N/A GO:0000175 ... O00411 39164235
    889962 8u8v:A (2.74) BS01 dna N/A GO:0003676 ... Q96QE5 39164235
    889963 8u8v:B (2.74) BS01 dna N/A GO:0003676 ... Q96QE5 39164235
    889964 8u8v:E (2.74) BS01 rna N/A GO:0000175 ... O00411 39164235
    889965 8u8v:E (2.74) BS02 dna N/A GO:0000175 ... O00411 39164235
    889966 8u8v:E (2.74) BS03 APC N/A GO:0000175 ... O00411 39164235
    889967 8u8v:E (2.74) BS04 MG N/A GO:0000175 ... O00411 39164235
    889968 8u8w:A (1.8) BS01 PYR 4.1.3.3 GO:0005737 ... A0A0H3FJT8 N/A
    889969 8u8x:A (1.69) BS01 W9N 2.7.10.1 GO:0004672 ... P04626 38820338
    889970 8u8y:A (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889971 8u8y:A (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889972 8u8y:B (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889973 8u8y:B (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889974 8u8y:C (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889975 8u8y:C (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889976 8u8y:D (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889977 8u8y:D (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889978 8u8y:E (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889979 8u8y:E (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889980 8u8y:F (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889981 8u8y:F (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889982 8u8y:G (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889983 8u8y:G (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889984 8u8y:H (2.1) BS01 IMP 1.1.1.205 GO:0000166 ... P20839 38323936
    889985 8u8y:H (2.1) BS02 NAD 1.1.1.205 GO:0000166 ... P20839 38323936
    889986 8u8z:A (3.25) BS01 LBV N/A GO:0000155 ... Q885D3 39127720
    889987 8u8z:B (3.25) BS01 LBV N/A GO:0000155 ... Q885D3 39127720
    889988 8u94:A (1.4) BS01 ADP 2.7.1.24 GO:0004140 ... A0A0H3FR62 N/A
    889989 8u96:A (1.5) BS01 ATP 2.7.1.24 GO:0004140 ... A0A0H3FR62 N/A
    889990 8u97:A (1.5) BS01 ANP 2.7.1.24 GO:0004140 ... A0A0H3FR62 N/A
    889991 8u98:A (1.4) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    889992 8u98:A (1.4) BS02 GLY 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    889993 8u98:A (1.4) BS03 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    889994 8u98:B (1.4) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    889995 8u98:B (1.4) BS02 GLY 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    889996 8u98:B (1.4) BS03 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    889997 8u98:C (1.4) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    889998 8u98:C (1.4) BS02 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    889999 8u98:C (1.4) BS03 GLY 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A
    890000 8u98:D (1.4) BS01 PLP 4.4.1.8 GO:0000096 ... A0A0H3FMF8 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).